NO04G02630, NO04G02630 (gene) Nannochloropsis oceanica

Overview
NameNO04G02630
Unique NameNO04G02630
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2568
Alignment locationchr4:700581..703148 -

Link to JBrowse

Properties
Property NameValue
DescriptionFg-gap repeat domain protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:700581..703148 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007155cell adhesion
GO:0008150biological_process
Vocabulary: Cellular Component
TermDefinition
GO:0008305integrin complex
GO:0005886plasma membrane
Vocabulary: INTERPRO
TermDefinition
IPR013517FG-GAP
IPR013519Int_alpha_beta-p
IPR000413Integrin_alpha
Homology
BLAST of NO04G02630 vs. NCBI_GenBank
Match: EWM28646.1 (fg-gap repeat domain protein [Nannochloropsis gaditana])

HSP 1 Score: 975.7 bits (2521), Expect = 7.300e-281
Identity = 489/674 (72.55%), Postives = 555/674 (82.34%), Query Frame = 0
Query:    1 MDLPEYNSSPRNSILSPGLTHRASKTPRSSGLGEETTSHFQFNEIAFGHQPSIPEEESGGQYNNNKENKIKTPFQHLRQSPRLVAISPLKRLLLGASVSAVLLGILFVAGFFDNRSQS--SGGTPRRSEGGMRPASASLRGTVGDIGPAAXXXXXXXXXXXXTSGMLFPRNNDVDHHKPRVLMIHSLKPFERRNAHHFRHHDPDNKLTGGLAFSPPAVGSRQKKVQESQEEDTAEYVDEVDHNEDLERRAVSPPAEDVLKIDQALNKLALVLPSPFKTTGVVSHFHSITGVDKYHHFDVNDYFGSSVTNMGSDAKTGLTTLAVGAPGALENSGMVYFLNLRKDGSVDGYSYLTNADDTLGERWTSNVALGWTVENIGDLDGDGIDDLAVGAIGHPFGSSQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAMGLGKQRGGVYILYLNKDGTVKKTTQISSLYGWDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGGDGFPSGEFYGSVWILFLTKEGGVKKWRRLDELDAMLEPESLFGGSIASLGDLDGDGFPELIVGAPGANEFKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGAEASPTDKNYGSLHVVFLTPR 673
            MD P YN+SPR SILSPGLTHRASKTPRSSGL +ETTSHFQFNE     Q SI +EE   +Y  +KE+K+K+PF  LR SPRLVA +P KR LLGASVS VL+GILFV GFFDNR+ S  S  T  R   G+RP  ASLRGTVGD+GPAA            T G+LFPR+ DVDHHKPRV+MI SLK F RRN HH+  HDP+ +L+GG +   P  G                +V++VD ++D +RR+ SP AED+L I+ A +KLA+VLP  ++TTGVVSHFHSITGVD  H+FDVNDYFGSSVT++G    TGLTTLAVGAPGALENSGM+YFL+L KDG V  Y+YLTN D +LG+ WTSNVALGWTVENIGDLDGDG+DDLAVGAIG+P GSSQGA+YILF+T ++ IK H FITTGEAGFEP LKENSCFGSSIAR+GDLDGDGVTELAVGAMGLGKQRGG+YILY+NKDGTVKK+TQISSLYGWD KLNVEDQFGH+V +IGDLDGDG+ ELAVGGDGFPSGEFYGSVWIL+LTKEGGVK+WRR+DELD  LEPESLFGGSI  LGDLDGDGFPELIVGAPGAN FKGDA+I+SL A+ATVK +KS+VDEVGVLSDSIKEEDEFAWSLCN+GDINGDGVPDLA+GAE SP DKN+GSLHVVFLTPR
Sbjct:    1 MDQPGYNNSPRGSILSPGLTHRASKTPRSSGLCDETTSHFQFNEFGLDRQSSIRKEEE-NRYITDKEHKMKSPFDTLRHSPRLVAFTPAKRFLLGASVSLVLIGILFVIGFFDNRAMSSPSTSTTHRRSAGVRP--ASLRGTVGDVGPAAGPAAAASLASTLTGGVLFPRSEDVDHHKPRVMMIPSLKSFSRRNVHHYDTHDPNGRLSGGKSAVKPPAGXXXXXXXXXXXXXXXVHVEDVDIDDDGKRRSASPDAEDILNIEHASDKLAVVLPHEYETTGVVSHFHSITGVDSNHNFDVNDYFGSSVTSLGGTPGTGLTTLAVGAPGALENSGMIYFLDLEKDGKVKNYTYLTNKDSSLGDHWTSNVALGWTVENIGDLDGDGVDDLAVGAIGYPVGSSQGAVYILFMTPERGIKSHQFITTGEAGFEPFLKENSCFGSSIARIGDLDGDGVTELAVGAMGLGKQRGGIYILYMNKDGTVKKSTQISSLYGWDHKLNVEDQFGHAVRAIGDLDGDGITELAVGGDGFPSGEFYGSVWILYLTKEGGVKQWRRIDELDGHLEPESLFGGSIDMLGDLDGDGFPELIVGAPGANGFKGDAFIVSLGANATVKHYKSLVDEVGVLSDSIKEEDEFAWSLCNIGDINGDGVPDLALGAETSPADKNFGSLHVVFLTPR 671          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: EWM23456.1 (fg-gap repeat domain protein [Nannochloropsis gaditana])

HSP 1 Score: 521.2 bits (1341), Expect = 4.900e-144
Identity = 285/624 (45.67%), Postives = 385/624 (61.70%), Query Frame = 0
Query:   62 YNNNKENKIKTPFQHLRQSPRLVAISPLKRLLLGASVSAVLLGILFVAGFFD-NRSQSSGGTPRRSEGGMRPASASLRGTVGDIGPAAXXXXXXXXXXXXTSGMLFPRNNDVDHHKPRVLMIHSLKPFERRNAHHFRHHDPDNKLTGGLAFSPPAVGSRQKKVQESQEEDTAEYVDEVDHNEDLE-RRAVSPPAEDVLKIDQALNKLALV--LPSPFKTTGVVSHFHSITGVDKYHHFDVNDYFGSSVTNMGSDAKTGLTTLAVGAPGALENSGMVYFLNLRKDGSVDGYSYLTNAD------------DTLGERWTSNVALGWTVENIGDLDGDGIDDLAVGAIGHPFGSSQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAMGLGKQRGGVYILYLNKDGTVKKTTQISSLYGWDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGGDGFPSGEFYGSVWILFLTKEGGVKKWRRLDELDAMLEPESLFGGSIASLGDLDGDGFPELIVGAPGANEFKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGAEASPTDKNYGSLHVVFL 670
            Y ++K  K ++ F     +      S  + L +GA ++  LLGIL   GFF+  ++ S   T  RS     PA          + P              + G    +++ +DHH  RV++I S +PF RRN HHF  H                 G+R        E   A  +   D  E +E RR       DVL  D+ L+ +      P PF T G V       GVD +H  D +DYFGSS+ NMG +  T LTTLAVGAPGAL+ SG +YF+++ ++G V+ YSYLT+ D             + G+ W  N ALGW +EN+GDLDGDG++DLAVGA+G+P G+S+GA++I FLT +  IK +  IT G  GF   L ++  FGSS++RLGDLDGDGVTELAVGAMG+GK+RGGV++L++NKDGTVK T  I+SL GWD KL V+DQFG +V  +GDLDGDGVP++ V GDGFP+GE YG+VW+LFL  +G VK WRRLDE D +LEPE+LFG S+ASLGDLDGDG  EL++GAPG +E +G+A+I+SL+ +  V+ +K+V D    L   I   DEF WS+ ++GD++GDGVPDLA+ AE SP + N+ SL+++FL
Sbjct:  124 YEDDKNKKFRSSFSSPASASLSQGQSAFRSLFIGACLTCGLLGILSTVGFFNRGKTNSYVYTRPRSSSYASPAVLDPEDFDVPLPPKRALRGSVHNQVVTSEGSRIVQSH-IDHHHSRVILIPSHEPFTRRNVHHFAQH-----------------GARLGTNTHRNETGNARAIHVDDMEEFVEDRREYVRHPNDVLLRDEDLHAMEATAHFPYPFITNGDVHKIEVAHGVDDHHDADSHDYFGSSMVNMGYNPATKLTTLAVGAPGALDTSGAIYFMDVNREGDVENYSYLTHEDFVETVGGGTGGSVSFGKAWGPNSALGWALENVGDLDGDGVNDLAVGALGYPAGNSKGAVFIFFLTAEHEIKSYKVITEGVGGFPHQLNQHWRFGSSLSRLGDLDGDGVTELAVGAMGMGKERGGVFVLFMNKDGTVKNTHLIASLRGWDHKLVVQDQFGSAVRGMGDLDGDGVPDMVVSGDGFPAGESYGAVWVLFLNVDGSVKYWRRLDEFDPLLEPEALFGASLASLGDLDGDGRQELLIGAPGLHELRGEAFIVSLDKEGRVRHYKTVTDSDSDLEAVISSNDEFGWSVTSLGDLDGDGVPDLAVAAETSPGETNHPSLYMLFL 729          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: EDY81761.1 (FG-GAP repeat domain protein [Verrucomicrobiae bacterium DG1235])

HSP 1 Score: 238.4 bits (607), Expect = 6.300e-59
Identity = 147/389 (37.79%), Postives = 219/389 (56.30%), Query Frame = 0
Query:  299 DYFGSSVTNMGSDAKTGLTTLAVGA---PGALENSGMVYFLNLRKDGSVDGYSYLTNADDTLGERWTSNVALGWTVENIGDLDGDGIDDLAVGAIG-HPFGSSQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAM---GLGKQRGGVYILYLNKDGTVKKTTQISSLY-GWDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGGD-GFPSGEFYGSVWILFLTKEGGVKKWRRLDELDA-----MLEPESLFGGSIASLGDLDGDGFPELIVGA---PGANEFKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGAEASPTDKN-YGSLHVVFL 670
            D FG  V ++G     G+T LAVG     G   N+G V+ L + +DG+V     +++          +N   G  +  IGDL+GDGI DLAVG  G +  G+ +GA++ILFL  D  +  H  I+    GF   L  +  FGS++A +GDLDGDGVT++AVG+      G  +G V+IL LN DGTVK   +ISSL  G++  L+ EDQFG ++  + DL+GDGV EL V       +GE +G++WIL++  +G VK   ++   +      ++   SLFG  +  + DL+GDG PE++VG    PG    +G  + + LN + TV + + V    G     + +ED F  S+  V D+NGDGVP+ A+GA ++    N  GS+ ++FL
Sbjct:  890 DLFGFEVDDLGDVNGDGVTDLAVGTFDDDGGF-NTGAVWILFMNEDGTVAAEQKISDTQGEFTGDLNTNALFGSALCGIGDLNGDGIPDLAVGNYGDNDGGNDRGAVWILFLNSDGTVGNHQKISQTRGGFTAPLLNDDQFGSAVANIGDLDGDGVTDIAVGSWHDDDGGSNKGAVWILNLNADGTVKDYQKISSLSGGFNGALDNEDQFGSALARLDDLNGDGVDELIVSAAYDDDAGENFGALWILYMNPDGTVKDQSKISAFEGGFTGPLVGSNSLFGFGVDGVADLNGDGTPEIVVGVRGDPGGGHMRGAIWTLFLNPNGTVASEQKVTTSTGGFGGMLMDEDLFGTSVSTVSDLNGDGVPEYAVGASSADDGGNAKGSVWILFL 1277          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: WP_083794438.1 (hypothetical protein [Verrucomicrobiae bacterium DG1235])

HSP 1 Score: 238.4 bits (607), Expect = 6.300e-59
Identity = 147/389 (37.79%), Postives = 219/389 (56.30%), Query Frame = 0
Query:  299 DYFGSSVTNMGSDAKTGLTTLAVGA---PGALENSGMVYFLNLRKDGSVDGYSYLTNADDTLGERWTSNVALGWTVENIGDLDGDGIDDLAVGAIG-HPFGSSQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAM---GLGKQRGGVYILYLNKDGTVKKTTQISSLY-GWDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGGD-GFPSGEFYGSVWILFLTKEGGVKKWRRLDELDA-----MLEPESLFGGSIASLGDLDGDGFPELIVGA---PGANEFKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGAEASPTDKN-YGSLHVVFL 670
            D FG  V ++G     G+T LAVG     G   N+G V+ L + +DG+V     +++          +N   G  +  IGDL+GDGI DLAVG  G +  G+ +GA++ILFL  D  +  H  I+    GF   L  +  FGS++A +GDLDGDGVT++AVG+      G  +G V+IL LN DGTVK   +ISSL  G++  L+ EDQFG ++  + DL+GDGV EL V       +GE +G++WIL++  +G VK   ++   +      ++   SLFG  +  + DL+GDG PE++VG    PG    +G  + + LN + TV + + V    G     + +ED F  S+  V D+NGDGVP+ A+GA ++    N  GS+ ++FL
Sbjct:  927 DLFGFEVDDLGDVNGDGVTDLAVGTFDDDGGF-NTGAVWILFMNEDGTVAAEQKISDTQGEFTGDLNTNALFGSALCGIGDLNGDGIPDLAVGNYGDNDGGNDRGAVWILFLNSDGTVGNHQKISQTRGGFTAPLLNDDQFGSAVANIGDLDGDGVTDIAVGSWHDDDGGSNKGAVWILNLNADGTVKDYQKISSLSGGFNGALDNEDQFGSALARLDDLNGDGVDELIVSAAYDDDAGENFGALWILYMNPDGTVKDQSKISAFEGGFTGPLVGSNSLFGFGVDGVADLNGDGTPEIVVGVRGDPGGGHMRGAIWTLFLNPNGTVASEQKVTTSTGGFGGMLMDEDLFGTSVSTVSDLNGDGVPEYAVGASSADDGGNAKGSVWILFL 1314          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: WP_069124909.1 (hypothetical protein [Candidatus Thiodiazotropha endolucinida] >ODJ87342.1 FG-GAP repeat protein [Candidatus Thiodiazotropha endolucinida])

HSP 1 Score: 234.6 bits (597), Expect = 9.200e-58
Identity = 149/393 (37.91%), Postives = 219/393 (55.73%), Query Frame = 0
Query:  296 DVNDYFGSSVTNMGSDAKTGLTTLAVGAP---GALENSGMVYFLNLRKDGSVDGYSYLTNADDTLGERWTSNVALGWTVENIGDLDGDGIDDLAVGA-IGHPFGSSQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAM---GLGKQRGGVYILYLNKDGTVKKTTQISSLYG-WDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGGDG-FPSGEFYGSVWILFLTKEGGVKKWRRLDE----LDAMLEPESLFGGSIASLGDLDGDGFPELIVGAPGANE---FKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGA---EASPTDKNYGSLHVVFL 670
            DV D FG ++ N+G     G+T +AVGAP      EN G V+ L +  DG VD +  +++               G  +  +GDL+GDG  D+AVGA +    G+ +GA++ILFL  D  +     I+  E  FE  L EN  F  ++A +GDL+ DGVT+LAVG       G  RG V+IL++N DGTV+ + +ISS  G  DR L+ ED FG +V  IGDL+GDGV +LAVG  G    G   G+VWILFL  +G V   +R+ +     D  L     FGG++A+LGD++ DG  +L VGA  +++    +G  +++ L  D  V +   + D  G     +   D+F  ++  +GD++GD + DLA+GA   +   TDK  G+L V+F+
Sbjct:   54 DVEDQFGLALANIGDLEVDGVTDIAVGAPFDDDEGENRGAVWILFMDSDGKVDTHQKISDGSGDFTGDLDDGDQFGRAIAPLGDLNGDGFLDIAVGAPLDDDAGTDKGAVWILFLNGDGTVLSEQKISQDEGDFEGDLDENDRFAHALASIGDLNNDGVTDLAVGVPYDDDGGTDRGAVWILFMNSDGTVQSSQKISSDEGNLDRDLDDEDHFGTAVTEIGDLNGDGVTDLAVGVTGDDDGGPERGAVWILFLNADGTVDSKKRISQNRASFDGQLSDNDRFGGALANLGDINSDGTDDLAVGAKQSDDGGAERGTVWVLFLEIDGEVISSSKISDTEGSFDGDLDSGDQFGAAVAQLGDLDGDDINDLAVGASLDDDGGTDK--GALWVLFM 444          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: OGY64401.1 (hypothetical protein A3B92_02630 [Candidatus Harrisonbacteria bacterium RIFCSPHIGHO2_02_FULL_42_16])

HSP 1 Score: 230.3 bits (586), Expect = 1.700e-56
Identity = 149/394 (37.82%), Postives = 217/394 (55.08%), Query Frame = 0
Query:  296 DVNDYFGSSVTNMGSDAKTGLTTLAVGA---PGALENSGMVYFLNLRKDGSVDGYSYLTNADDTLGERWTSNVALGWTVENIGDLDGDGIDDLAVGAIGHPFGSSQ-GAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAM--GLGKQRGG-VYILYLNKDGTVKKTTQISSLY-GWDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGG----DGFPSGEFYGSVWILFLTKEGGVKKWRRLD----ELDAMLEPESLFGGSIASLGDLDGDGFPELIVGA---PGANEFKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGA-EASPTDKNYGSLHVVFL 670
            D+ND FG SV N+G     G+T L  GA        + G +Y L +   G+V  +   +N+    G    +N   G +V  IGDL+GDG+ DLAVGA     G++  GA+YILF+     +K    I++        +  +  FG SIA +GDLDGDGVT++AVGA     G   GG VYIL++N DGTVK   +ISS   G    ++ +DQFG  + S+GDLDGDGV +L VG     DG   G   G+ +ILF+  +G VK  +++          L     FG S+ASLGDLDGD   +++VGA      N   G  YI+ +N + TVK+ + +    G L  ++   D+F  S+ +VGD++GDG+ D+A+GA E        G+++++F+
Sbjct:  926 DINDNFGMSVANIGDLDGDGVTDLVAGAHKDDDGFTDRGAIYVLFMNPAGTVKSFQKTSNSFG--GYTLANNDEFGVSVAAIGDLNGDGVTDLAVGAHADNDGNADGGAVYILFMNPAGTVKSAQKISSTAGSLGVTMDTSDNFGQSIANIGDLDGDGVTDIAVGAFVDDDGNTDGGAVYILFMNPDGTVKSNQKISSTAGGLGVTMDTDDQFGQDIASLGDLDGDGVTDLVVGAHQDDDGNTDG---GAAYILFMNPDGTVKSNQKISSTAGNFGTTLVATDSFGYSVASLGDLDGDSVKDIVVGARLDNDGNTDGGAVYILFMNPNGTVKSKQKISSTAGGLGVTMDTGDQFGVSIASVGDLDGDGITDIAVGAPEDDDXXAGSGAIYILFM 1314          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: PCH69432.1 (hypothetical protein COC01_01400 [Bacteroidetes bacterium])

HSP 1 Score: 229.2 bits (583), Expect = 3.800e-56
Identity = 147/395 (37.22%), Postives = 218/395 (55.19%), Query Frame = 0
Query:  296 DVNDYFGSSVTNMGSDAKTGLTTLAVGA----PGALENSGMVYFLNLRKDGSVDGYSYLTNADDTLGERWTSNVALGWT---VENIGDLDGDGIDDLAVGA-IGHPFGSSQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGA---MGLGKQRGGVYILYLNKDGTVKKTTQISSLY-GWDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGGD-GFPSGEFYGSVWILFLTKEGGVKKWRRLDE----LDAMLEPESLFGGSIASLGDLDGDGFPELIVGA---PGANEFKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGAE-ASPTDKNYGSLHVVFL 670
            D  D+FGSS+  +G     G+  +AVGA     GA  N+G ++ L L  DG+V  +  ++N +      ++S    G     +  +GDLDGDG+ DLAVGA      G  +GA++ILFL  D  +KGH  I+  +  F         FG S+  +GDLD DGV +LAVG       G  RG V+IL++N +GTVK   +ISS   G+   L   D+FG+++ S+GDLD DGVP++AVG       G   G+VWILFL   G VK  +++D+       +L+ +  FG S+ ++GD D DG  +L+VGA         +G  +I+ LN++ TVK+ + +    G  +  +   D+F  S+  +GDING G PDLA+GA        N G++ V+F+
Sbjct: 1670 DNTDFFGSSIAPLGDLDGDGVDDIAVGALFDDDGAF-NAGAIWILFLNADGTVKAHQKISNTEGGFTGTFSSKDLFGIAAAPISCMGDLDGDGVADLAVGADXXXDGGLDKGAVWILFLNTDGTVKGHQKISDTQGNFTAFF-NGKRFGQSVTCIGDLDSDGVPDLAVGMPRDNDGGGDRGAVFILFMNTNGTVKSYQKISSTQGGFGNGLTNADRFGNAISSLGDLDNDGVPDIAVGAFLDSDLGYRKGAVWILFLNANGTVKAKQKIDQAQGNFTGVLDIKDFFGASVETIGDFDADGNNDLLVGARFDDDGGADRGAVWILFLNSNGTVKSHQKISSTEGGFAGPLNNGDQFGRSIALIGDINGGGTPDLAVGANXXXXXXXNRGAVWVLFM 2062          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: WP_108293106.1 (hypothetical protein [gamma proteobacterium symbiont of Ctena orbiculata] >PUB82766.1 hypothetical protein DBP02_13975 [gamma proteobacterium symbiont of Ctena orbiculata] >PUB88469.1 hypothetical protein DBP01_11905 [gamma proteobacterium symbiont of Ctena orbiculata])

HSP 1 Score: 225.7 bits (574), Expect = 4.300e-55
Identity = 146/393 (37.15%), Postives = 216/393 (54.96%), Query Frame = 0
Query:  296 DVNDYFGSSVTNMGSDAKTGLTTLAVGAP---GALENSGMVYFLNLRKDGSVDGYSYLTNADDTLGERWTSNVALGWTVENIGDLDGDGIDDLAVGA-IGHPFGSSQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAM---GLGKQRGGVYILYLNKDGTVKKTTQISSLYG-WDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGGDG-FPSGEFYGSVWILFLTKEGGVKKWRRLDE----LDAMLEPESLFGGSIASLGDLDGDGFPELIVGAPGANE---FKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGA---EASPTDKNYGSLHVVFL 670
            DV D FG ++ N+G     G+  LAVGAP      EN G V+ L +  DG VD +  +++               G  +  + DL+GDG  D+AVGA +    G+ +GA++ILFL  D  +     I+  E  FE  L +N  F  ++A +GDL+ DGVT+LAVG       G  RG V+IL++N DGTV  + +ISS  G  DR L+ ED FG +V  IGDL+GDGV +LAVG  G    G   G+VWILFL  +G V+  +R+ +     D  L     FGG++A+ GD++ DG  +L+VGA  +++    +G  +I+ L  D  V +   + D  G     +   D+F  ++  +GD++GD + DL +GA   +   TDK  G+L V+F+
Sbjct:   54 DVQDQFGLALANIGDLEVDGVIDLAVGAPFDDDDGENRGAVWILFMDSDGKVDTHQKISDDSGDFTGDLDDGDQFGRAIAPLDDLNGDGFLDIAVGAPLDDDAGTDKGAVWILFLNGDGTVISEQKISQDEGEFEGDLDDNDQFAHALASIGDLNNDGVTDLAVGVPYDDDGGTDRGAVWILFMNSDGTVLSSQKISSDEGNLDRDLDDEDHFGTAVTEIGDLNGDGVTDLAVGVSGDDDGGPERGAVWILFLNADGTVESKKRISQNRASFDGQLSDNDRFGGALANFGDINSDGTDDLVVGAKQSDDGGAERGAVWILFLEVDGEVISSSKISDTEGGFDGDLDSGDQFGAAVAQMGDLDGDDINDLVVGASLDDDGGTDK--GALWVLFM 444          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: OVE82713.1 (hypothetical protein BVY03_00245, partial [bacterium K02(2017)])

HSP 1 Score: 223.8 bits (569), Expect = 1.600e-54
Identity = 143/391 (36.57%), Postives = 211/391 (53.96%), Query Frame = 0
Query:  296 DVNDYFGSSVTNMGSDAKTGLTTLAVGA---PGALENSGMVYFLNLRKDGSVDGYSYLTNADDTLGERWTSNVALGWTVENIGDLDGDGIDDLAVGAIG-HPFGSSQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAMG---LGKQRGGVYILYLNKDGTVKKTTQISSLYG-WDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGGDGFPSG-EFYGSVWILFLTKEGGVKKWRRLD----ELDAMLEPESLFGGSIASLGDLDGDGFPELIVGA---PGANEFKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGAEASPT-DKNYGSLHVVFL 670
            D  D FG  V ++G     G   LAVGA      + + G VY L ++ DGSV  +  +++   +    + S    G  +  +GDLDGDG+ DLAVGA G +  GS +GAI+ILF+  D  +     I+     F  VL+ +  FG+S+  +GDLDGDG+ +LAVGA      G  RG VYIL+L + GTVK   +IS   G +   L+  D+FG  V ++GDLDGDGV +L VG      G    G+V++L +   G V  ++++        A L     FG S+A++GD DGDG  +L+VGA       + +G AY++ L  D TVK+F+ + D VG  +  +   D    S+  + D++GDGV DL I A        + G+++ +FL
Sbjct:   82 DNTDLFGGEVASIGDLDGDGNVDLAVGAAVDDDGIASGGAVYILFMQTDGSVISFQKISDTAGSFTATFGSTHYFGGAITELGDLDGDGVQDLAVGASGDNDGGSDRGAIFILFMQTDGSVNSFQKISDTAGSFTAVLENSDRFGASVDSIGDLDGDGIGDLAVGAYADSDGGSSRGAVYILFLEERGTVKSYQKISDTAGSFTATLDNSDEFGGDVAAMGDLDGDGVVDLVVGASFDDDGANDIGAVYLLNMQTNGSVSSYQKISYSAGSFTADLGLSDRFGVSVAAMGDHDGDGNLDLVVGAFLDDDGGDARGAAYVLYLQTDQTVKSFQKISDTVGGFTAVLDNTDYLGGSVTLLDDLDGDGVDDLVISANGDDDGGSSRGAIYPIFL 472          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: ODC00645.1 (hypothetical protein A3197_10040 [Candidatus Thiodiazotropha endoloripes])

HSP 1 Score: 218.8 bits (556), Expect = 5.200e-53
Identity = 140/395 (35.44%), Postives = 216/395 (54.68%), Query Frame = 0
Query:  296 DVNDYFGSSVTNMGSDAKTGLTTLAVGAP---GALENSGMVYFLNLRKDGSVDGYSYLTNADDTLGERWTSNVALGWTVENIGDLDGDGIDDLAVGA-IGHPFGSSQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAMG---LGKQRGGVYILYLNKDGTVKKTTQISSLYG-WDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGGDG-FPSGEFYGSVWILFLTKEGGVKKWRRLDE----LDAMLEPESLFGGSIASLGDLDGDGFPELIVGAPGANE---FKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGA---EASPTDKNYGSLHVVFLTP 672
            D  D FG+++ N+G     G+  LAVG+P      EN G V+ L L  DG VD    ++++  +           G  + ++ DL+GDG  D+ V A +    G+  GA+++LFL +D  ++ +  I+         L  +  FG ++A +GDL+ DG+T+LAVG       G  RG V+IL++N DGTV    +ISS  G  +RK N  D+FG SV ++GDLD DGV ++AVG  G    G   G+VW+LFL  +G V   +R+      L+  L     FG ++A+LGDL+ DG  +L+VGAPG+++    +G  +I+ +  D  + +   + D  G    S+ + D+F  SL  +GD+N D   DLA+GA   +   TDK  G+  ++FL P
Sbjct:   49 DDGDQFGAALANIGDLEGDGVIDLAVGSPYDDDNGENRGAVWVLFLDDDGQVDTQQKISDSKGSFDGDLDDGDLFGSALASLDDLNGDGFRDIVVSAPMDDDGGTDHGALWVLFLKDDGTVESYQKISEESGELNENLDADDQFGHAVANIGDLNNDGITDLAVGMPNDDDGGTDRGAVWILFMNSDGTVSARQKISSEKGDLERKPNDGDRFGSSVTAVGDLDDDGVVDIAVGTSGDDDGGSDRGAVWVLFLNSDGTVDGLKRISHNRGGLEDQLSDGDRFGSALANLGDLNDDGNDDLMVGAPGSDDGGSNRGATWILFMQGDGEIISASKISDTEGDFDGSLNDNDQFGSSLAAIGDLNEDDHQDLAVGAPFDDNGGTDK--GATWILFLGP 441          
The following BLAST results are available for this feature:
BLAST of NO04G02630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28646.17.300e-28172.55fg-gap repeat domain protein [Nannochloropsis gadi... [more]
EWM23456.14.900e-14445.67fg-gap repeat domain protein [Nannochloropsis gadi... [more]
EDY81761.16.300e-5937.79FG-GAP repeat domain protein [Verrucomicrobiae bac... [more]
WP_083794438.16.300e-5937.79hypothetical protein [Verrucomicrobiae bacterium D... [more]
WP_069124909.19.200e-5837.91hypothetical protein [Candidatus Thiodiazotropha e... [more]
OGY64401.11.700e-5637.82hypothetical protein A3B92_02630 [Candidatus Harri... [more]
PCH69432.13.800e-5637.22hypothetical protein COC01_01400 [Bacteroidetes ba... [more]
WP_108293106.14.300e-5537.15hypothetical protein [gamma proteobacterium symbio... [more]
OVE82713.11.600e-5436.57hypothetical protein BVY03_00245, partial [bacteri... [more]
ODC00645.15.200e-5335.44hypothetical protein A3197_10040 [Candidatus Thiod... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL081nonsL081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR111ngnoR111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009555NSK009555Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G02630.1NO04G02630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578807gene_2033Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100177g14gene1944Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G02630.1NO04G02630.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G02630 ID=NO04G02630|Name=NO04G02630|organism=Nannochloropsis oceanica|type=gene|length=2568bp
CTCCAGCTAGCGAGGGTAGGGAAGCGGAAAGCGGGCTTGCCCTTGGTCGA
GAAGCCAAATTTGCGAGACCCCCCCGCACGGCACGCAAACGCACGCACGC
AATTATGGACCTACCGGAATACAACAGCAGCCCCCGAAACTCCATACTGA
GTCCGGGGCTGACCCACCGTGCCAGCAAGACCCCTAGAAGCTCTGGTCTG
GGCGAGGAGACGACGTCGCACTTCCAATTCAATGAGATTGCCTTTGGTgt
gagtaggataacatcccatgcctgttacatgcccagctttgtctagcacc
ttcatgtgtcagcgcgtatcagcactccttccatccctcttgttgcgtcc
tttctctatcaacagggctggagacatacctcgtaccccggctctgcacc
ctatgcatacactcctcctcgctttaacgtcacacagtcaaacctctgct
tccattgtcgtcacaccaattcttgcattttaactcacacacttgcacag
CACCAACCCTCAATCCCTGAGGAAGAGTCCGGCGGGCAATACAACAACAA
CAAAGAAAACAAGATCAAGACCCCTTTCCAACATCTCCGTCAAAGCCCCC
GCCTCGTCGCCATCTCCCCCTTGAAGCGACTTTTACTGGGGGCCAGCGTC
TCAGCCGTTCTTCTCGGCATCTTATTTGTAGCTGGGTTTTTTGACAATCG
CTCCCAGTCTTCCGGTGGCACCCCTCGTCGTTCCGAAGGAGGTATGCGTC
CTGCCTCCGCCTCTTTGCGAGGCACTGTCGGAGACATTGGCCCTGCTGCC
GGTCCTGCCGCAGCGGCATCCCTGGCTTCAACACTCACTAGTGGGATGCT
CTTTCCTCGTAATAATGACGTAGACCACCATAAGCCGCGTGTGCTGATGA
TTCATTCGTTGAAGCCATTTGAACGTCGGAACGCCCACCATTTCAGGCAT
CACGACCCGGACAACAAGCTCACGGGGGGGCTGGCCTTTTCACCCCCTGC
CGTAGGGAGCCGACAGAAGAAAGTGCAGGAGTCCCAGGAGGAGGATACTG
CTGAGTACGTCGACGAGGTGGATCACAACGAAGATTTGGAGCGACGGGCT
GTATCGCCCCCGGCGGAGGATGTGTTGAAGATTGACCAGGCTTTGAACAA
GCTTGCGTTGGTGTTGCCTTCGCCATTCAAGACGACGGGGGTCGTTTCTC
ATTTTCATTCTATCACAGGCGTGGACAAGTACCACCATTTTGACGTGAAT
GATTATTTTGGGTCGTCTGTAACTAATATGGGGAGCGATGCCAAGACTGG
CTTGACCACGCTCGCGGTGGGTGCACCCGGGGCTCTGGAAAATTCGGGAA
TGGTCTACTTCTTGAATCTGCGAAAGGATGGAAGCGTAGATGGTTATAGT
TATTTGACGAATGCGGATGATACCTTGGGGGAGCGTTGGACGTCAAATGT
GGCTTTGGGATGGACGGTGGAAAATATCGGGGATTTGGATGGGGACGGTA
TTGACGACCTGGCCGTTGGTGCGATTGGTCACCCCTTCGGGAGCTCACAA
GGCGCGATCTACATATTGTTTTTGACGGAAGATAAGCGAATTAAGGGGCA
TACATTCATCACAACGGGGGAGGCAGGGTTCGAGCCTGTCCTAAAGGAAA
ACTCGTGCTTTGGCTCGTCGATCGCCCGTCTCGGAGATTTAGACGGAGAT
GGCGTTACTGAGCTTGCGGTGGGCGCGATGGGCTTGGGCAAGCAGCGAGG
GGGGGTGTACATTCTCTATTTAAATAAAGATGGGACGGTGAAAAAGACAA
CGCAGATTTCGTCATTGTATGGGTGGGACCGTAAACTGAATGTGGAAGAT
CAGTTTGGACATTCAGTGCATTCGATTGGCGATTTAGATGGGGATGGGGT
CCCTGAATTGGCGGTGGGTGGTGACGGTTTCCCCTCGGGAGAATTCTATG
GCTCGGTGTGGATCTTGTTCTTGACCAAGGAGGGGGGGGTGAAGAAGTGG
AGGAGGTTGGATGAGCTGGATGCGATGTTAGAGCCTGAGAGCTTGTTTGG
GGGGTCGATTGCTTCGCTTGGGGATCTAGACGGAGATGGATTTCCGGAGT
TGATTGTTGGGGCACCTGGCGCGAATGAATTTAAGGGGGACGCGTACATT
ATTTCGTTGAATGCAGATGCAACGGTGAAGACTTTTAAGAGCGTGGTGGA
TGAGGTTGGGGTGTTGTCGGATAGTATAAAGGAGGAGGATGAGTTTGCCT
GGTCGTTGTGTAACGTTGGGGATATTAATGGGGATGGCGTGCCAGATTTG
GCAATCGGCGCTGAAGCCTCACCAACGGATAAAAACTATGGCTCATTGCA
CGTTGTATTTTTGACGCCAAGGTAGAAAGGGGGTGCATAGTAGATGGGAG
GGAAGGGAGAGAGAAAATGACACAAGGAAGTCTCGAGGTGCGGAGAGAAG
GAAAAAAAAGAAGAGAATCTTTTGATAGCGTCTAGGGTCTCTTTTATATT
CAATTTATATGTACCCTGGCAAAAGTAGTACCAGACAAAAAGCAAAAAGT
TGCCGAAATGTTGAGAAT
back to top

protein sequence of NO04G02630.1

>NO04G02630.1-protein ID=NO04G02630.1-protein|Name=NO04G02630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=673bp
MDLPEYNSSPRNSILSPGLTHRASKTPRSSGLGEETTSHFQFNEIAFGHQ
PSIPEEESGGQYNNNKENKIKTPFQHLRQSPRLVAISPLKRLLLGASVSA
VLLGILFVAGFFDNRSQSSGGTPRRSEGGMRPASASLRGTVGDIGPAAGP
AAAASLASTLTSGMLFPRNNDVDHHKPRVLMIHSLKPFERRNAHHFRHHD
PDNKLTGGLAFSPPAVGSRQKKVQESQEEDTAEYVDEVDHNEDLERRAVS
PPAEDVLKIDQALNKLALVLPSPFKTTGVVSHFHSITGVDKYHHFDVNDY
FGSSVTNMGSDAKTGLTTLAVGAPGALENSGMVYFLNLRKDGSVDGYSYL
TNADDTLGERWTSNVALGWTVENIGDLDGDGIDDLAVGAIGHPFGSSQGA
IYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGV
TELAVGAMGLGKQRGGVYILYLNKDGTVKKTTQISSLYGWDRKLNVEDQF
GHSVHSIGDLDGDGVPELAVGGDGFPSGEFYGSVWILFLTKEGGVKKWRR
LDELDAMLEPESLFGGSIASLGDLDGDGFPELIVGAPGANEFKGDAYIIS
LNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAI
GAEASPTDKNYGSLHVVFLTPR*
back to top
Synonyms
Publications