NO04G02560, NO04G02560 (gene) Nannochloropsis oceanica

Overview
NameNO04G02560
Unique NameNO04G02560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1579
Alignment locationchr4:682933..684511 -

Link to JBrowse

Properties
Property NameValue
DescriptionStress-inducible protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:682933..684511 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
IPR005344UPF0121
IPR019734TPR_repeat
Homology
BLAST of NO04G02560 vs. NCBI_GenBank
Match: ETI43225.1 (hypothetical protein F443_11779 [Phytophthora parasitica P1569] >ETM43156.1 hypothetical protein L914_11316 [Phytophthora parasitica])

HSP 1 Score: 156.0 bits (393), Expect = 2.600e-34
Identity = 121/406 (29.80%), Postives = 204/406 (50.25%), Query Frame = 0
Query:    6 EAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRAL--AEARKAADQT-------RVPTLNELLPKMQAFLLKHRLDGRLFLPRIFLFLNAFLYLF-PFLLPSGWGLASYRRALYTIALI-HLYSIYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQ---LLWLFTEVLTLAK-PIFGKSLSARNTSLASLYTQNPQYGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMPD 397
            +AK +GN+A+ AG +  A+  F+ A+ +     +    H+ YSNRSAAQL L  A EAL DA +C  L+P +AKG+SR G+ALY LGR++DA  AY+ GL     NA L   L   EA+    ++                  ++ FL+ ++ +  +F    F+  +  L  F  F +P      +     + +AL+ H   + +THG+PK+   Y  +++ D  A   F  L+   +    +   + P+ L E +     L    ++L LA+ P+     S     L +L   +P + A+++  A+W  ++T     A  +++A+G+ L+LE+ TP RN   L L+WQ L++RYM+  S +++  F+ L    L +  H +CP ++   Y  +  +   AV M D
Sbjct:    5 QAKTRGNRAFAAGLYSDAVACFSEALAVAP---SDPNAHVFYSNRSAAQLKLNKADEALKDADQCIALKPNWAKGYSRRGSALYALGRYADAYRAYKDGLSHEASNAGLLEGLRAVEAKLVTQRSGXXXXXXXXXXXXXXXVNLKGFLVGNKRN--MFQLYQFILRSLMLLCFVNFWIPMPLSSYAAYSNFFKLALVNHASYLAFTHGVPKWNAAYAQRLLLDPAAQVFFFCLVF--WVSAPHGMAMMPVFLLEMVHYFAYLQSLLQILGLAESPVVTLVTSKALVPLTALIISDPSFPALAT-RAKWAKLYTRMPQVAANIDVAIGVALILEMLTPSRNFLLLVLYWQVLRVRYMI--SPQLQEAFRSLHAMILTVVHHPRCPAMIAAVYGKIHAF---AVKMGD 397          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: XP_002996904.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >XP_002898074.1 transmembrane protein, putative [Phytophthora infestans T30-4] >EEY63487.1 transmembrane protein, putative [Phytophthora infestans T30-4] >EEY68672.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 154.5 bits (389), Expect = 7.500e-34
Identity = 126/409 (30.81%), Postives = 199/409 (48.66%), Query Frame = 0
Query:    6 EAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRAL--AEARKAADQTRVP---------TLNELLPKMQAFLL---KHRLDGRLFLPRIFLFLNAFLYLFPFLLPSGWGLASYRRALYTIALIHLYSIYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQL---LWLFTEVLTLAK-PIFGKSLSARNTSLASLYTQNPQYGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMPD 397
            +AK +GN+A+ AG +  A+  F+ A+ +     +    H+ YSNRSAAQL L  A EAL DA +C  L+P +AKG+SR G+ALY LGR++DA  AY+ GL     NA L   L   EA+    ++  P                  + FLL   ++      FL R  + L    +  P LL S    A+Y        + H   + ++HG+PK+   Y  +++ D  A   F  L+   +    +   + P+ L E +     L    + L LA+ P+     S     L +L   +  + A+++  A+W  ++T     A  +++A+G+ L+LE+ TP RN   L L+WQ L++RYM+  S +++  F+ L    L L  H +CP VV   Y  +  +   AV M D
Sbjct:    5 QAKTRGNRAFAAGLYSDAVACFSEALAVAP---SDPNAHVFYSNRSAAQLKLNKADEALKDADQCIILKPNWAKGYSRRGSALYALGRYADAYRAYKDGLSHEVSNAGLLEGLRAVEAKLVTQRSGTPQXXXXXXXXXXXXXXXXXKIFLLGNKRNMFQLYQFLLRSLMLLCFVNFWIPVLLSS---YAAYSNFFKLALVNHASYLAFSHGVPKWNAAYAQRLLLDPAAQVFFFCLVF--WVSAPHGMAMMPVFLLEMVHFFAYLQSLLQTLGLAESPVVTLVNSKALVPLTALIISDRSFPAMAT-RAKWAKLYTRMPQVAANIDVAIGVALILEMLTPSRNFLLLVLYWQVLRVRYMI--SPQLQEAFRSLHATILTLVHHPRCPAVVAAVYGKIHAF---AVKMGD 399          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: XP_024586701.1 (stress-inducible protein [Plasmopara halstedii] >CEG50332.1 stress-inducible protein [Plasmopara halstedii])

HSP 1 Score: 153.7 bits (387), Expect = 1.300e-33
Identity = 116/402 (28.86%), Postives = 200/402 (49.75%), Query Frame = 0
Query:    6 EAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRAL-----------AEARKAADQTRVPTLNELLPKMQAFLLKHRLDGRLFLPRIFLFLNAFLYLFPFLLPSGWGLASYRRALYTIALI-HLYSIYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQLLWLFTEVLTLAKPIFGKSLSARN-------TSLASLYTQNPQYGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYM 389
            +AK++GN+A+ AG +  A+  F+ A+ +     T   +H+ YSNRSAA L L  A +AL DA KC  ++P + KG+SR GAALY LGR++DA  AY+ GL     N+ L   L           A    +   T  P     +        ++      F+ R  L L    +  P LL S     ++    + +AL+ H   + +THG P++   Y  +++ D  A  LF  L+   +    +   + P+ L   ++++  F+ V +L + +   +LS            L +L   +P + A+++  A+W  +++     A  +++A+G+ L++E+  P RN   L L+WQ L++RYM+  S +++  F+ L    L+  SH +CP V+G  Y  L G++
Sbjct:    5 QAKSRGNRAFAAGLYSDAVACFSEALAIAP---TDPNVHVFYSNRSAALLKLDKADKALEDADKCITIKPKWPKGYSRRGAALYALGRYADAYRAYKDGLSHDTSNSGLLEGLKAVEVKLATQGAGISSSTSSTSSPLSTSTIKSFLFGSKRNIFQLYQFILRTMLLLCFINFWIPMLLSSSAAYGNF----FKVALVNHTSYLAFTHGAPRWSAAYSQRLLLDPAAQILFFCLVF--WVSDPHGLAMMPVFL---LEMVHYFSYVQSLLEVLGLGNLSIVTFVTTKALVPLTALIISDPSFPALTT-HAKWTKLYSRMPQVAANIDLAIGISLIVEMLLPTRNFLLLILYWQVLRVRYMI--SPQLQEAFRMLHASILSAVSHPRCPSVIGNVYGKLHGFI 391          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: GAX97579.1 (Hypothetical protein PINS_005430 [Pythium insidiosum])

HSP 1 Score: 153.3 bits (386), Expect = 1.700e-33
Identity = 132/435 (30.34%), Postives = 198/435 (45.52%), Query Frame = 0
Query:    6 EAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRALAEARK------------------------AADQTRVPTLNELLPKMQAFLLKHRLDGRLFLPRIFLFLNAFLYLFPFLLPSGWGLASYRRALYTIALIHLYSIYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQLLWLFTEVLTLAKPIFGKSLSARNTSLASLYTQNPQYGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMPDXXXXXXXXXXXXXLGRCSVM 417
            +AK +GN+A+ AGN++ A+  F+ AI L      G Q H+ YSNRSA+ L LG    AL DA KC  L+  +A+G+SR+GAAL+ LGR  DA  AY+ GL+  P NA L   L   +                                 TL + +   +  + +       F  R  L L    Y  P LLPS   +A +  A + +         +THG+PK++  Y  +++ D  +  LF  L+   F    Y   + P+ L E +  +     +L               +  A +Y + PQ  A                    T+E+A+GL +VLEL TP RN   + L+WQ L++RYM+  S  +++ F++L    L +TSH +CP VVG+ Y+ +  +   AV+M D      X        RCSVM
Sbjct:    5 QAKDRGNRAFAAGNYRDAVACFSEAIALHERSGDG-QPHVYYSNRSASHLKLGDGASALADADKCVALKRDWARGYSRKGAALHALGRLPDAYRAYQDGLKVEPSNAALRDGLQAVQSLMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLAQFVAGDKTAIFQ----SAQFAMRSVLLLAFVSYWLPLLLPSARRVALFNHASFLV---------FTHGVPKWQAAYAQRLVLDPTSQALFYCLVF--FVSAPYGLAMVPVWLLEMVHWVAYLGNLLV--------------SKWAKVYHRMPQVAA--------------------TVEVAIGLAIVLELLTPARNFLLVMLYWQLLRVRYMI--SPPLQDAFRRLHASILTITSHPRCPPVVGRLYAKIHAF---AVSMTDVAQQQQXAAS----SRCSVM 380          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: XP_012201217.1 (hypothetical protein SPRG_20228 [Saprolegnia parasitica CBS 223.65] >KDO28070.1 hypothetical protein SPRG_20228 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 150.6 bits (379), Expect = 1.100e-32
Identity = 131/401 (32.67%), Postives = 186/401 (46.38%), Query Frame = 0
Query:    6 EAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRALAEAR-KAADQTRVPTLNELLPKMQAFLLKHRLDGRLFLPRIFLFLNAFLYLFPFLLP-SGWGLASYRRALYTI-----ALIHLYSIYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQLLWLFTEVLTLAKPIFGKSLSARNTSLAS---LYTQNPQYG-AISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMP 396
            EAK +GN+ + AG + +A   FT AI LE P N      I YSNRS A L L    +A+ DAKKC EL P + KG+SR G AL+ + ++++A AAYE GL + P +A+L   L  A+ +  D   +  L    P  +               R F F    L    FLL  + WG AS     +       A  +   + + HG P+    Y  +V+ D     L   LL   +    Y   L P+ L EG+     F   L L+    G S+ A   SL      Y   PQ      +   +W A++  T      L++ +GL L+LEL TP RN   L ++WQ L++RYM+  S ++KN F +LD     L  H + P ++   YS L+  M   V MP
Sbjct:    4 EAKLRGNRFFTAGQYLEAADAFTEAIGLE-PSNA-----IFYSNRSGAYLKLNRGQDAIADAKKCIELRPEWPKGYSRLGTALFYVKKYAEAKAAYERGLTKDPNDANLLDGLRNAKAQLPDAVSLKELTMASPHAKF--------------RTFQFGLRSLMAASFLLYWTAWGSASTAAFAFATFFKLGAANYASFLAWNHGKPQMNAAYAQRVVTDPTTQALMFCLLF--WFSSPYSIALLPIALNEGVHFA-SFAGSLFLS---LGSSVGATCFSLLDPIMPYYLGPQTAWHTLNNHGKWAALYHRTPQVVANLDVGIGLCLILELLTPARNFMLLLIYWQLLRIRYMI--SPQLKNAFSQLDMTLSALVLHPRAPTILATGYSKLKDLMANMVKMP 376          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: OQR88005.1 (hypothetical protein ACHHYP_07713 [Achlya hypogyna])

HSP 1 Score: 149.1 bits (375), Expect = 3.100e-32
Identity = 121/395 (30.63%), Postives = 175/395 (44.30%), Query Frame = 0
Query:    7 AKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRALAEARKAADQTRVPTLNELL-----PKMQAFLLKHRLDGRLFLPRIFLFLNAFLYLFPFLLPSGWGLASYRRALYTIALIHLYSIYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQLLWLFTEVLTLAKPIFGKSLSARNTSLASLYTQNPQYG-AISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMP 396
            AK +GN+ + AG + QA+  FT AI LE P N      I YSNRS A L L    +A+ DAKKC EL P +AKG+SR G A Y   ++ +A AAYE GL + P + +L   L  A+    +    TL EL       K + F          F  R  + +    Y        G G  ++       A+ +   + + HG P+    Y  +V+ D     L   LL   +    Y   L P+ L EG+        +L       G    A        Y   P       +   +W A++  T      L++ +GL L+LEL TP RN   L ++WQ L++RYM+  S ++KN F +LD     L  H + P V+   Y+ L+  +   V MP
Sbjct:    5 AKLRGNELFAAGQYAQAVDAFTEAINLE-PSNA-----IFYSNRSGAYLKLNRGADAIADAKKCVELRPEWAKGYSRLGTAYYYTKQYVEAKAAYERGLAKAPTDTNLQDGLRNAKAQLPEGSSLTLKELTMGTPHAKFRTF---------QFALRSLMAVCFVAYWTVAWGNVGLGAFAFATFFKLGAINYASFLVWNHGKPQLNASYAQRVVTDPTTQALMFCLLF--WFSNPYSIALLPIALNEGVHFASFLGSLLLALGSTAGTRFMATVADPLLPYFMGPATAWHTLNNHGKWAALYHRTPQVVANLDVGIGLCLILELLTPARNFMLLLVYWQLLRIRYMI--SPQLKNAFSQLDATLAMLVHHPRAPAVLATGYAKLKDLLANMVKMP 380          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: XP_008621507.1 (hypothetical protein SDRG_17053 [Saprolegnia diclina VS20] >EQC25058.1 hypothetical protein SDRG_17053 [Saprolegnia diclina VS20])

HSP 1 Score: 147.1 bits (370), Expect = 1.200e-31
Identity = 121/397 (30.48%), Postives = 179/397 (45.09%), Query Frame = 0
Query:    6 EAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRALAEAR-KAADQTRVPTLNELLPKMQAFLLKHRLDGRLFLPRIFLFLNAFLYLFPFLLP-SGWGLASYRRALYTI-----ALIHLYSIYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQLLWLFTEVLTLAKPIFGKSLSARNTSLASLYTQNPQYGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMP 396
            EAK +GN+ + AG +Q+A   FT AI LE P N      I YSNRS A L L    +A+ DAKKC EL P + KG+SR G AL+ + ++++A AAYE GL + P +A+L   L   + +  D   +  L    P  +               R F F    L    F+L  + WG AS     +       A  +   + + HG P+    Y  +V+ D     L   LL   +    Y   L P+ L EG+        +        G +  A    +   Y          +   +W A++  T      L++ +GL L+LEL TP RN   L ++WQ L++RYM+  S ++KN F +LD     L  H + P ++   Y+ L+  M   V MP
Sbjct:    4 EAKLRGNRFFTAGQYQEAADAFTEAIGLE-PSNA-----IFYSNRSGAYLKLNRGPDAIADAKKCIELRPEWPKGYSRLGTALFYVKKYAEAKAAYERGLAKDPNDANLLDGLRNTKAQLPDAISLQELTMASPHAKF--------------RTFQFGLRCLMAASFVLYWTAWGSASTAAFAFATFFKLGAANYASFLAWNHGKPQMNAAYAQRVVTDPTTQALMFCLLF--WFSSPYSIALLPIALNEGVHFASFAGSLFLSLGSSVGATCFALLDPIMPYYLGPQTAWHTLNNHGKWAALYHRTPQVVANLDVGIGLCLILELLTPARNFMLLLIYWQLLRIRYMI--SPQLKNAFSQLDTTLSALVLHPRAPTLLATGYAKLKDLMANMVKMP 376          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: OQR93695.1 (hypothetical protein THRCLA_08369 [Thraustotheca clavata])

HSP 1 Score: 139.8 bits (351), Expect = 1.900e-29
Identity = 118/399 (29.57%), Postives = 180/399 (45.11%), Query Frame = 0
Query:    6 EAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRALAEARKA---ADQTRVPTLNELLPKMQAFLLKHRLDGRLFLPRIFLF-----LNAFLYLFPFLLPSGWGLASYRRALYTIALIHLYSIYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQLL-WLFTEVLTLAKPIFGKSLSARNTSLASLYTQNPQYGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMP 396
            +AK +GN+ +  G +++A + FT AI L+ P N      I YSNRS A L L    +A+ DAKKC EL P + KG+SR G ALY + ++ +A  AYE GL + P + +L   L  A+     A   +  T+     K ++F    R                  L AF +   F L    G  +Y   L            + HG P+    Y  +V+ D     L   LL   +    Y   L P+ L EG+    +L +  L +  P+    +      +   Y          +   +W A++  T      L++ +GL L+LELFTP RN   L ++WQ L++RYM+  S ++KN F +LD+    L  H +CP  +   Y+ L+  +   V MP
Sbjct:    4 DAKLRGNRFFSDGEYEKAAEAFTQAIALD-PSNA-----IYYSNRSGAYLKLNRGSDAVKDAKKCIELRPEWPKGYSRLGTALYYMKKYVEAKNAYEQGLTKDPNDVNLKDGLKNAKAQLPDAVSLKELTVGSPHAKFRSFQFALRXXXXXXXXXXXXXXXXXTLAAFAFANFFKL----GAINYAALL-----------VWNHGKPQMNAVYAQRVVTDPTTQALMFCLLF--WFSNPYSIALLPIALNEGMHFASFLGSLFLAIGSPVGSIIMDKVFDPIMPYYVGPQTAWHTLNNHGKWAALYHRTPQVVANLDVGIGLCLILELFTPARNFMLLLIYWQLLRIRYMV--SPQLKNAFGQLDQTLTALVYHPRCPTAIATGYNKLKDMLAGMVKMP 377          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: GBG24150.1 (Small glutamine-rich tetratricopeptide repeat-containing protein [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 139.0 bits (349), Expect = 3.200e-29
Identity = 114/392 (29.08%), Postives = 196/392 (50.00%), Query Frame = 0
Query:    8 KAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLG---RFSDAMAAYEAGLQQTPGNADLTRALAEARKAADQTRVPTLNELLPKMQAFLLKHRLDGRLFLPRIFLFLNAFLYLFPFLLPSGWGLASYRRALYTIALIHLYSIYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQLLWLFTEVLTLAKPIFGKSLSARNTSLASLYTQN-PQYGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMP 396
            K +GN   + G   +A + ++ AIEL+         H+ +SNR+     LG    AL DA +C EL+P +AKG++R   A   LG   ++ DA+A +    ++  G    TR+   +  +A  +   +L ++L K+Q  L            R+FL LN  LY+FP  L S +G  +++RAL++   +++  +Y  HG P     Y  +++ D +     ++ +L +F G   +  L P LL+E   + ++   VLT    I  +     NT +   +TQ  P+  A     ++WQ     ++ +A +LE+A+GL L++EL TP R+   LF +W +L++RYM+  S ++K  F+ LD     + S++         Y  +R + G  V MP
Sbjct:   10 KERGNSLLREGKKDEAAEAYSAAIELDGSN------HVYFSNRAHVYNLLGDFPSALADANRCVELKPDWAKGYNRLAMAFQGLGDQKKYEDALAKW----RELGGAPAATRSSGTSAASATASGPSSLPDMLSKVQLGL------------RVFLVLNFALYVFP--LTSSYG--AFQRALFSACGVYMIHLYRVHGRPVRTQAYAQRIVTD-YRSHYAMAAMLFAFSGSGRLIALMPHLLSE---IGYVADYVLTAQPQIAAQLAPPLNTHVLPRFTQTPPEQWASLDLRSKWQRYNQVSMHYAASLEVAIGLGLIVELVTPSRSFLVLFAYWHFLRIRYMV--SDDIKQTFRALD---TKIASYASRNATAMNLYGKIRTFAGSMVQMP 366          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: KOO28322.1 (stress-induced protein sti1-like protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 114.8 bits (286), Expect = 6.600e-22
Identity = 62/124 (50.00%), Postives = 85/124 (68.55%), Query Frame = 0
Query:    6 EAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRALAEARKAADQTR 130
            EAKAKG +A+QAG   +AI+H+T AI+L          H+LYSNRSAA   +G   EAL DA KC E++P + KG+ R+GAAL+ LG++  A+AAYE GL   PG A LT+ LA+A+K A++ +
Sbjct:    4 EAKAKGTEAFQAGRFAEAIEHYTKAIDLGA-------THVLYSNRSAAYGGIGKWEEALKDATKCVEMQPDWGKGYGRKGAALHGLGQYDAAIAAYEKGLTVEPGLAMLTKGLADAKKEAERDK 120          
The following BLAST results are available for this feature:
BLAST of NO04G02560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETI43225.12.600e-3429.80hypothetical protein F443_11779 [Phytophthora para... [more]
XP_002996904.17.500e-3430.81conserved hypothetical protein [Phytophthora infes... [more]
XP_024586701.11.300e-3328.86stress-inducible protein [Plasmopara halstedii] >C... [more]
GAX97579.11.700e-3330.34Hypothetical protein PINS_005430 [Pythium insidios... [more]
XP_012201217.11.100e-3232.67hypothetical protein SPRG_20228 [Saprolegnia paras... [more]
OQR88005.13.100e-3230.63hypothetical protein ACHHYP_07713 [Achlya hypogyna... [more]
XP_008621507.11.200e-3130.48hypothetical protein SDRG_17053 [Saprolegnia dicli... [more]
OQR93695.11.900e-2929.57hypothetical protein THRCLA_08369 [Thraustotheca c... [more]
GBG24150.13.200e-2929.08Small glutamine-rich tetratricopeptide repeat-cont... [more]
KOO28322.16.600e-2250.00stress-induced protein sti1-like protein [Chrysoch... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL081nonsL081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR111ngnoR111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009564NSK009564Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G02560.1NO04G02560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551680gene_2027Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100182g1gene1950Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G02560.1NO04G02560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G02560 ID=NO04G02560|Name=NO04G02560|organism=Nannochloropsis oceanica|type=gene|length=1579bp
AGACAAAGAGCCCGCTGTCCTCTTTGCTGCCTCTCCCCAGCAATACCTTT
TGTCACCACATTCATCATCGGTGGGGAATCACCGTGGCCGGCATAGAGCA
GGAGCAGCAGCGATGGACGACTGGGCCGAAGCCAAGGCCAAGGGCAACCA
GGCCTACCAAGCCGGGAACCATCAACAAGCTATCAAGCATTTCACGACTG
CGATCGAGCTGGAGACCCCCAAGAACACTGGAAAACAACTGCACATTTTG
TATTCGAACCGCTCGGCTGCCCAGCTCAGTTTGGGCCTAGCCCACGAGGC
GCTCATGGACGCCAAAAAATGCCAGGAACTGGAGCCGACATTTGCCAAAG
GCTGGAGCCGTGAGGGTGCTGCCTTGTATCGACTGGGACGGTTCTCCGAC
GCTATGGCGGCTTACGAAGCCGGGTTGCAGCAGACGCCGGGAAATGCGgt
aagtgagaagtttttggtgctctgtatgggatgataggggagggaaggat
tggaagtagactagtctgcgaaggcccgatattaatttggtcttctcttt
agccttctctttggtcttcataggcccgtggtcgttcattcactcaaact
atatcctcttatttactcacccgcattctccatccaccaccaatcctatc
accacctcacagGACCTGACCCGCGCCCTAGCCGAAGCCCGCAAAGCCGC
GGATCAAACGCGGGTTCCCACTCTCAACGAGCTTCTGCCTAAAATGCAAG
CATTTTTGCTGAAACACCGCTTGGACGGCCGGCTCTTCCTCCCCCGGATC
TTTCTTTTTCTCAATGCCTTTCTCTACCTCTTCCCGTTCCTCCTCCCCTC
CGGGTGGGGCCTAGCCAGCTATCGTCGTGCACTTTACACCATCGCGCTGA
TACACCTCTACTCTATCTACTACACCCATGGCATGCCGAAATTTAAAATC
GAATACCTGGCGCAAGTCATGCAAGACACGCATGCCCCCCCCCTCTTCCT
CTCCCTCCTCCTCCTCTCCTTCAAAGGTAAAGCTTATATCTTCGGCCTGA
CCCCCTTGCTGCTCACCGAAGGGATACAACTCCTATGGCTTTTCACCGAG
GTCCTTACTCTTGCCAAACCCATTTTCGGGAAATCCCTCTCCGCGCGCAA
CACAAGCCTTGCTTCACTTTACACTCAAAATCCGCAATATGGTGCCATCT
CCTCAGGCCCCGCACGGTGGCAAGCCATCTTCACCGCAACCATTTCGCAC
GCAATCACCCTTGAGATAGCCATGGGTCTTTTTCTGGTGTTGGAACTGTT
CACGCCCTGGCGGAACACGTTCGGCTTGTTCCTGTTTTGGCAGTATCTCC
AAATGAGGTACATGCTCGACAAAAGCGGCGAAGTCAAAAATAAATTCAAA
AAGTTGGACGAGTTTTTTTTGAATCTGACCAGTCACTCAAAGTGTCCCGG
GGTGGTAGGACAGGCCTATTCAATGCTGAGGGGGTATATGGGGAGGGCTG
TTGCGATGCCGGATCCTCAGCAGCAGCAGCAGCAGCAGCGTGGGGGTGGT
GGGTTGGGCCGGTGTAGTGTGATGTGAGG
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protein sequence of NO04G02560.1

>NO04G02560.1-protein ID=NO04G02560.1-protein|Name=NO04G02560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=417bp
MDDWAEAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNR
SAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAA
YEAGLQQTPGNADLTRALAEARKAADQTRVPTLNELLPKMQAFLLKHRLD
GRLFLPRIFLFLNAFLYLFPFLLPSGWGLASYRRALYTIALIHLYSIYYT
HGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGI
QLLWLFTEVLTLAKPIFGKSLSARNTSLASLYTQNPQYGAISSGPARWQA
IFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKS
GEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMPDPQQQ
QQQQRGGGGLGRCSVM*
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Synonyms
Publications