jgi.p|Nanoce1779_2|551680, gene_2027 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|551680
Unique Namegene_2027
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:592025..593911 -

Link to JBrowse

Properties
Property NameValue
TranscriptId551766
ProteinId551680
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:592025..593911 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G02560NO04G02560Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551680mRNA_2027-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551680mRNA_2027Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|551680

>mRNA_2027-protein ID=mRNA_2027-protein|Name=jgi.p|Nanoce1779_2|551680|organism=Nannochloropsis oceanica|type=polypeptide|length=417bp
MGDWAEAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNR
SAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAA
YEAGLQQTPGNAVSEKFLVLSRKAADQTRVPTLNELLPKMQAFLLKHRLD
GRLFLPRIFLFLNAFLYLFPFLLPSGWGLASYRRALYTIALIHLYSIYYT
HGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGI
QLLWLFTEVLTLAKPIFGKSLSARNTSLASLYTQNPQYGAISSGPARWQA
IFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKS
GEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMPDPQQQ
QQQQRGGGGLGRCSVM*
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Synonyms
Publications