NO04G02560, NO04G02560 (gene) Nannochloropsis oceanica

Overview
NameNO04G02560
Unique NameNO04G02560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1579
Alignment locationchr4:682933..684511 -

Link to JBrowse

Properties
Property NameValue
DescriptionStress-inducible protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:682933..684511 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
IPR005344UPF0121
IPR019734TPR_repeat
Homology
BLAST of NO04G02560 vs. NCBI_GenBank
Match: EWM28638.1 (stress-inducible protein [Nannochloropsis gaditana])

HSP 1 Score: 505.4 bits (1300), Expect = 1.700e-139
Identity = 256/395 (64.81%), Postives = 310/395 (78.48%), Query Frame = 0
Query:    2 DDWAEAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRALAEARKAADQTRVPTLNELLPKMQAFLLKHRLDGRLFLPRIFLFLNAFLYLFPFLLPSGWGLASYRRALYTIALIHLYSIYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQLLWLFTEVLTLAKPIFGKSLSARNTSLASLYTQNPQYGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMPD 397
            +DW +AKAKGNQAYQAGNH  A++HFTTAI+L TPK+   QLHILYSNRSAA+L+LGLA+EAL DAKKC E++P FAKGWSR GAA+YR+GR+ +A+AAY  GL Q PGNADLTRALAEA  AA + R P   +LLP ++AF LK RL  RLFLPR+F+ LN  +YL PF LP+GWGLASYRR LYT A++HLY++Y  HG PKF I++LA+ MQD HA PLFLSLLLLSF+ K Y+ G+  LLLTEG+Q+L    ++L LA+P   K+LSAR   LA  YTQNP+YGA+ +  ARW A+FTA+ SHA  LEI  GLFL LEL TP RN FG+FLFWQYLQMRYMLD+SG VK  FK+LD+F L LTSH  CP  +G+ Y +LRGY+GRAVA+PD
Sbjct:    6 EDWTQAKAKGNQAYQAGNHLLAVEHFTTAIQL-TPKDGDHQLHILYSNRSAARLNLGLAYEALADAKKCTEIQPAFAKGWSRVGAAMYRMGRYPEAVAAYTEGLVQAPGNADLTRALAEASHAAQEMRGPPRRDLLPHLRAFFLKDRLATRLFLPRVFMLLNGLIYLIPF-LPAGWGLASYRRVLYTAAVLHLYALYNAHGFPKFTIDFLARCMQDVHASPLFLSLLLLSFRSKTYLPGVAALLLTEGMQVLCFLNQLLALARPAAEKALSARFMGLAMRYTQNPRYGALPTPQARWAALFTASASHAAALEIGTGLFLGLELLTPRRNIFGIFLFWQYLQMRYMLDQSGVVKGHFKRLDDFLLRLTSHPSCPAFLGRGYELLRGYLGRAVAIPD 398          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: CBN73810.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 199.5 bits (506), Expect = 2.000e-47
Identity = 137/395 (34.68%), Postives = 208/395 (52.66%), Query Frame = 0
Query:    6 EAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRALAEARKAADQTRVPTLNELLPK--MQAFLLKHRLDGRLFLPRIFLFLNAFLYLFPFLLPSGWGLASYRRALYTIALIHLYSIYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQLLWLFTEVLTLAKPIFGKSLSARNTSLASLYTQNPQYGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKS---GEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMP 396
            EAKA+G +A++AG+   AI  F+ AIEL+   NT  QLH+ YSNRSAA L    A EALMDA++C E+ P++AKG+SR G AL+RLGR   A AAY  GL++ PG+ +L + L EA+K     +        P+  +  ++  H      F  R+FL  N  +Y+ P    S   L +YRR LY +  ++   +Y  HG  +F  EY A V+ D     +  +LL +    + Y+ G+ P++L E    LW  + +L ++   F + L+             P +G+  S   RW A  +        +E+  G+ LV EL  P RN   L L+WQ L+M+YM++ +   G  +  F+ LD     +T+  +CP VVG  Y+ L+  + + V  P
Sbjct:   69 EAKARGGEAWKAGDVDGAIVCFSKAIELDM-DNTSGQLHVHYSNRSAAFLKQNKATEALMDAERCVEVNPSWAKGYSRMGTALFRLGRHDKAAAAYSKGLEREPGSVELRKNLLEAQKQHVAAQAAASRAARPRETLAEYVRAHPSLTFQFGLRLFLLANWVMYMLPLQAAS---LFAYRRLLYAMIFVNALGLYGRHGRLRFNAEYAANVVTDPCCQTIMTALLFVF--NRPYLVGIVPMVLLELTDFLWFLSGLLQMSPGAFFEKLNRGVDRFGGALFGIPNWGS-RSVTDRWSAAKSKASEWGAWIEVMFGMILVAELLLPRRNFVMLGLYWQTLRMKYMINAATGRGYTQAAFRTLDARIKVVTTKRRCPPVVGSMYAKLKTLLAKMVMPP 456          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: CCA15570.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 167.2 bits (422), Expect = 1.100e-37
Identity = 122/401 (30.42%), Postives = 212/401 (52.87%), Query Frame = 0
Query:    6 EAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTG------KQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRALAEA-RKAADQTRVPTL-----NELLPKMQAFLL---KHRLDGRLFLPRIFLFLNAFLYLFPFLLPSGWGLASYRRALYTIALIHLYS-IYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQL---LWLFTEVLTLAKPIFGKSLSARNT-SLASLYTQNPQYGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRG 387
            +AK +GN+A+ AG++Q AI  FT AI L   + +G       +L++ +SNRSA  L +    +AL DA+KC  L+  + KG+SR+GAAL++LGR+ +A   Y+ GL+    N  L   L    R  +  TR  T      +  +P +++FL    K R     FL R F+ LN  +Y  P  +PS     ++    Y +A+++  S + +++G+PKF + Y  +++ D     L   L+   +    Y   + P+LL E + +   L  F +V+ LA     ++++ +    L  +    P +  +SS  ++W  ++      A ++++ +G+ LV EL TP RN   + L+WQ L++RYM+  S  ++  F+ L+   L++  H +CP  VG+ Y+ L+G
Sbjct:    5 QAKDRGNKAFSAGSYQDAITSFTEAIALYEREASGGSCPTSGKLYVYFSNRSACYLKINDGAQALKDAEKCIALKADWPKGYSRKGAALFQLGRYPEAYRTYQDGLKVDSNNPALLEGLQMVERNLSTSTRTATRSPAKPSSTVPSLRSFLFRDAKARFQTFQFLLRNFMLLNFIMYCLPVGIPSHIAYGNF----YKVAVLNYVSYLVFSNGIPKFNLGYAQRILMDPTTQSLCHCLVF--WISSTYTLAMVPILLIELVHVAAYLSSFLKVVGLANTALIRTVNQKAVIPLCGIIISEPTFATLSS-ESKWAKVYHRVPIVAASIDVTIGVALVFELLTPTRNFLLVILYWQLLRIRYMI--SPPLQEAFRNLNAVILSVMHHPRCPAFVGKVYTKLQG 396          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: CCI39425.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 166.4 bits (420), Expect = 1.900e-37
Identity = 122/405 (30.12%), Postives = 210/405 (51.85%), Query Frame = 0
Query:    4 WAEAKAKGNQAYQAGNHQQAIKHFTTAI------ELETPKNTG-KQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRA-------LAEARKAADQTRVPTLNELLPKMQAFLL---KHRLDGRLFLPRIFLFLNAFLYLFPFLLPSGWGLASYRRALYTIALIHLYS-IYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQL---LWLFTEVLTLAKPIFGKSLSARNT-SLASLYTQNPQYGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRG 387
            W +AK +GN+A+ AG+++ AI  F  AI      EL+    TG  +L++ YSNRSA  L +    +AL DA+KC  L P + KG+SR+GAAL++LGR+ +A   Y+ GL+    N  L          L+  +  +        +  +P +++FL    K R     FL R  + LN  +Y  P  +PS     ++    Y +AL++  S + YT+G+PK  + Y  +++ D     L   L+   +    Y   + P+LL E + +   L    +VL LA     ++++ +    +      +P +  +SS  ++W  ++      A ++++A+G+ L LEL TP RN   + L+WQ L++RYM+  S  ++  F+ L+   LN+  H +CP ++G+ Y+ L+G
Sbjct:    3 WEQAKNRGNKAFSAGSYRDAIASFDEAIAIYEREELKGGSITGPSKLYVYYSNRSACYLKINDGLKALKDAEKCIALNPDWPKGYSRKGAALFQLGRYPEAYRTYQDGLKVDSSNVALLEGLQMVEQNLSTGKHTSASNSFTKPSSTVPTLRSFLFCDAKARFQTFQFLLRNLMILNFIMYCLPIGIPSHIAYGNF----YKVALLNYVSYLAYTNGIPKLNLAYAQRILMDPTTQSLCHCLVF--WMSSTYTLAMIPILLIEVVHVAAYLASLFKVLGLANTALIQTMNKQAVIPVCGFLISDPTFATLSS-ESKWAKVYHRVPIVAASIDVAIGIVLGLELLTPTRNFLLVILYWQLLRIRYMV--SPPLQEAFRNLNIVILNIVHHPRCPTLIGKVYTKLQG 398          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: POM60779.1 (Transmembrane protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 162.2 bits (409), Expect = 3.600e-36
Identity = 128/407 (31.45%), Postives = 202/407 (49.63%), Query Frame = 0
Query:    6 EAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRAL--AEARKAADQTRV---PTLNELLPKMQAFLLKHRLDGRLFLPRIFLFLNAFLYL-------FPFLLPSGWGLASYRRALYTIALIHLYSIYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQ---LLWLFTEVLTLA-KPIFGKSLSARNTSLASLYTQNPQYGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGY---MGRAVA 394
            +AK +GN+A+ AG +  A+  F+ A+ +     +    H+ YSNRSAAQL L  A EAL DA +C  L+P + KG+SR G+ALY LGR++DA  AY+ GL     NA L   L   EA+ +  +T      + +   P   A L    L  +  + +++ F+   L L        P LL S    A+Y        + H+  + +THG PK+   Y  +++ D  A   F  L+   +    +   + P+ L E +     L    +VL LA   +     S     L +L    P +  +++  A+W  ++T T   A  +++A+G+ L+LE+ TP RN   L L+WQ L++RYM+  S +++  F+ L    L L +H +CP VVG  Y  +  +   MG A A
Sbjct:    5 QAKDRGNRAFSAGLYSDAVACFSEALAIAP---SAPNAHVFYSNRSAAQLKLNKAQEALNDADQCLSLKPNWPKGYSRRGSALYALGRYADAYRAYKDGLSHEASNAGLLEGLRAVEAKLSTQRTGTSYGASSSASTPPPAANLRGFLLGNKRSMFQLYQFVLRSLILLCFVNFWIPMLLSS---YAAYSNFFKLALVNHVSYLAFTHGAPKWNAAYAQRLLLDPAAQVFFFCLVF--WVSAPHGMAVMPVFLLEMVHYFAYLQSLLQVLGLADSAVVTLVTSKALVPLTALIISEPSFPTLAT-RAKWAKLYTRTPQVAANIDVAIGVALILEMLTPSRNFLLLVLYWQVLRVRYMI--SPQLQEAFRSLHTTILTLVNHPRCPAVVGTVYGKIHAFAVKMGDAAA 400          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: ETK83281.1 (hypothetical protein L915_11478 [Phytophthora parasitica] >ETL36682.1 hypothetical protein L916_11389 [Phytophthora parasitica] >ETL89881.1 hypothetical protein L917_11263 [Phytophthora parasitica] >ETP12993.1 hypothetical protein F441_11733 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 161.4 bits (407), Expect = 6.100e-36
Identity = 123/407 (30.22%), Postives = 202/407 (49.63%), Query Frame = 0
Query:    6 EAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRAL--AEARKAADQT-------RVPTLNELLPKMQAFLL---KHRLDGRLFLPRIFLFLNAFLYLFPFLLPSGWGLASYRRALYTIALIHLYSIYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQ---LLWLFTEVLTLAK-PIFGKSLSARNTSLASLYTQNPQYGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMPD 397
            +AK +GN+A+ AG +  A+  F+ A+ +     +    H+ YSNRSAAQL L  A EAL DA +C  L+P +AKG+SR G+ALY LGR++DA  AY+ GL     NA L   L   EA+    ++                  ++ FL+   ++      F+ R  + L    +  P LLPS    A+Y        + H   + +THG+PK+   Y  +++ D  A   F  L+   +    +   + P+ L E +     L    ++L LA+ P+     S     L +L   +P + A+++  A+W  ++T     A  +++A+G+ L+LE+ TP RN   L L+WQ L++RYM+  S +++  F+ L    L +  H +CP ++   Y  +  +   AV M D
Sbjct:    5 QAKTRGNRAFAAGLYSDAVACFSEALAVAP---SDPNAHVFYSNRSAAQLKLNKADEALKDADQCIALKPNWAKGYSRRGSALYALGRYADAYRAYKDGLSHEASNAGLLEGLRAVEAKLVTQRSGXXXXXXXXXXXXXXXVNLKGFLVGNKRNMFQLYQFILRSLMLLCFVNFWIPMLLPS---YAAYSNFFKLALVNHASYLAFTHGVPKWNAAYAQRLLLDPAAQVFFFCLVF--WVSAPHGMAMMPVFLLEMVHYFAYLQSLLQILGLAESPVVTLVTSKALVPLTALIISDPSFPALAT-RAKWAKLYTRMPQVAANIDVAIGVALILEMLTPSRNFLLLVLYWQVLRVRYMI--SPQLQEAFRSLHAMILTVVHHPRCPAMIAAVYGKIHAF---AVKMGD 397          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: XP_009834986.1 (hypothetical protein H257_10212 [Aphanomyces astaci] >ETV75352.1 hypothetical protein H257_10212 [Aphanomyces astaci])

HSP 1 Score: 161.4 bits (407), Expect = 6.100e-36
Identity = 133/405 (32.84%), Postives = 197/405 (48.64%), Query Frame = 0
Query:    1 MDDWAEAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRALAEARKAADQTRVP-TLNELLPKMQAFLLKHRLDGRLFLPRIFLFLNAFLYLFPFLL--PSGWG---LASYRRA-LYTIALIHLYS-IYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQLLWLFTEVLTLAKPIFGKSLSARNTSLASLYTQNPQ-YGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMPD 397
            MD   EAK +GN+ +Q G +QQAI  FT AI ++ P N      + YSNRS A L +  A +A+ DA+K  EL P + KG+SR G +L+   +++DA AAYE GL +   +A+L   L  A  A      P TL +L             D      R + F    L +  F+L   +GWG   LA++  A  + +A I+  S + Y HG PK    Y  +++ D     L  +LL   +    Y   L P++  E +        +L       G +L          +    Q    I +  A+W A++    S   TLE+A+GL L+LEL TP RN   L ++WQ L++RYM+  S ++KN F  LD        H + P +VG AYS L+  + + VA+P+
Sbjct:    1 MDAADEAKTRGNRFFQEGQYQQAIDAFTEAISID-PSNA-----VYYSNRSGAYLKVNKAAQAVTDARKVVELRPEWPKGYSRLGTSLFYQKKYADAKAAYEKGLAKDANDANLKDGLKNATAALSGVGAPQTLRQLC-----------WDTTHAKFRTYQFALRALMIVSFVLYWTAGWGSPSLAAFSFANFFKLAAINYVSFLAYNHGTPKLNQAYAQRLIMDPATQSLLFALLF--WFSTPYGLALFPVVANELVHFASFAGSLLLAVNSSLGSTLETHVFDRVMPFVVGAQTQWHILNTHAKWAAVYHRVPSLVATLEVAIGLSLILELLTPNRNFMLLLVYWQLLRIRYMI--SPQLKNAFADLDRVVTTAAFHPRSPPIVGTAYSKLKDMLAKMVAVPE 384          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: XP_008864437.1 (hypothetical protein H310_02641 [Aphanomyces invadans] >ETW06362.1 hypothetical protein H310_02641 [Aphanomyces invadans])

HSP 1 Score: 160.6 bits (405), Expect = 1.000e-35
Identity = 127/405 (31.36%), Postives = 196/405 (48.40%), Query Frame = 0
Query:    1 MDDWAEAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRALAEARKAADQTRVP-TLNELLPKMQAFLLKHRLDGRLFLPRIFLFLNAFLYLFPFLL--PSGWGLASYRRALYT-----IALIHLYSIYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQLLWLFTEVLTLAKPIFGKSLSAR--NTSLASLYTQNPQYGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMP 396
            MD   EAK +GN+ +Q G +QQAI  FT AI ++ P N      + YSNRS A L +  A  A+ DA+K  EL P + KG+SR G AL+   ++++A AAYE GL +   +A+L   L  A  A      P TL +L  +                 R F F    L +  F+L   +GWG   +    +       A+ ++  + Y HG PK    Y  +++ D     L  SLL   +    Y   L P+L  E +        +L       G +L  +  +  +  +     Q+  +++  A+W A++    +   +LE+A+GL L+LEL TP RN   L ++WQ L++RYM+  S ++KN F  LD     +  H +CP +V  AY+ L+  +G+ V MP
Sbjct:    1 MDAADEAKTRGNRFFQEGQYQQAIDAFTEAISID-PSNA-----VYYSNRSGAYLKVNKAALAVTDARKVVELRPDWPKGYSRLGTALFYQKKYTEAKAAYEKGLTKDATDANLKDGLKNASAALSGVGAPQTLRQLCWETTHAKF-----------RTFQFALRALQIVSFVLYWTAGWGSPDFAAFCFANFFKLAAINYVSFLAYNHGTPKLTQAYAQRLVMDPATQSLLFSLLF--WFSTPYALALFPILANELVHFASFAGSLLLAVNSSLGSTLETQVFDRVMPFVVGAQTQWHTLNT-HAKWAAVYHRVPTLVASLEVAIGLSLILELITPARNFMLLLVYWQLLRIRYMI--SPQLKNAFADLDRGITTIVYHPRCPPIVSTAYAKLKAMLGKMVEMP 383          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: ETO71879.1 (hypothetical protein F444_11864 [Phytophthora parasitica P1976])

HSP 1 Score: 158.3 bits (399), Expect = 5.200e-35
Identity = 122/407 (29.98%), Postives = 201/407 (49.39%), Query Frame = 0
Query:    6 EAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRAL--AEARKAADQT-------RVPTLNELLPKMQAFLL---KHRLDGRLFLPRIFLFLNAFLYLFPFLLPSGWGLASYRRALYTIALIHLYSIYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQ---LLWLFTEVLTLAK-PIFGKSLSARNTSLASLYTQNPQYGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMPD 397
            +AK +GN+A+ AG +  A+  F+ A+ +     +    H+ YSNRSAAQL L  A EAL DA +C  L+P +AKG+SR G+ALY LGR++DA  AY+ GL     NA L   L   EA+    ++                  ++ FL+   ++      F+ R  + L    +  P LL S    A+Y        + H   + +THG+PK+   Y  +++ D  A   F  L+   +    +   + P+ L E +     L    ++L LA+ P+     S     L +L   +P + A+++  A+W  ++T     A  +++A+G+ L+LE+ TP RN   L L+WQ L++RYM+  S +++  F+ L    L +  H +CP ++   Y  +  +   AV M D
Sbjct:    5 QAKTRGNRAFAAGLYSDAVACFSEALAVAP---SDPNAHVFYSNRSAAQLKLNKADEALKDADQCIALKPNWAKGYSRRGSALYALGRYADAYRAYKDGLSHEASNAGLLEGLRAVEAKLVTQRSGXXXXXXXXXXXXXXXVNLKGFLVGNKRNMFQLYQFILRSLMLLCFVNFWIPMLLSS---YAAYSNFFKLALVNHASYLAFTHGVPKWNAAYAQRLLLDPAAQVFFFCLVF--WVSAPHGMAMMPVFLLEMVHYFAYLQSLLQILGLAESPVVTLVTSKALVPLTALIISDPSFPALAT-RAKWAKLYTRMPQVAANIDVAIGVALILEMLTPSRNFLLLVLYWQVLRVRYMI--SPQLQEAFRSLHAMILTVVHHPRCPAMIAAVYGKIHAF---AVKMGD 397          
BLAST of NO04G02560 vs. NCBI_GenBank
Match: XP_008912168.1 (hypothetical protein PPTG_16395 [Phytophthora parasitica INRA-310] >ETN02434.1 hypothetical protein PPTG_16395 [Phytophthora parasitica INRA-310] >ETP41097.1 hypothetical protein F442_11687 [Phytophthora parasitica P10297] >KUF80596.1 Stress-induced-phosphoprotein 1 [Phytophthora nicotianae] >KUF97117.1 hypothetical protein AM588_10009277 [Phytophthora nicotianae])

HSP 1 Score: 157.9 bits (398), Expect = 6.800e-35
Identity = 122/407 (29.98%), Postives = 201/407 (49.39%), Query Frame = 0
Query:    6 EAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNRSAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAAYEAGLQQTPGNADLTRAL--AEARKAADQT-------RVPTLNELLPKMQAFLL---KHRLDGRLFLPRIFLFLNAFLYLFPFLLPSGWGLASYRRALYTIALIHLYSIYYTHGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGIQ---LLWLFTEVLTLAK-PIFGKSLSARNTSLASLYTQNPQYGAISSGPARWQAIFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKSGEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMPD 397
            +AK +GN+A+ AG +  A+  F+ A+ +     +    H+ YSNRSAAQL L  A EAL DA +C  L+P +AKG+SR G+ALY LGR++DA  AY+ GL     NA L   L   EA+    ++                  ++ FL+   ++      F+ R  + L    +  P LL S    A+Y        + H   + +THG+PK+   Y  +++ D  A   F  L+   +    +   + P+ L E +     L    ++L LA+ P+     S     L +L   +P + A+++  A+W  ++T     A  +++A+G+ L+LE+ TP RN   L L+WQ L++RYM+  S +++  F+ L    L +  H +CP ++   Y  +  +   AV M D
Sbjct:    5 QAKTRGNRAFAAGLYSDAVACFSEALAVAP---SDPNAHVFYSNRSAAQLKLNKADEALKDADQCIALKPNWAKGYSRRGSALYALGRYADAYRAYKDGLSHEASNAGLLEGLRAVEAKLVTQRSGXXXXXXXXXXXXXXXVNLKGFLVGNKRNMFQLYQFILRSLMLLCFVNFWIPMLLSS---YAAYSNFFKLALVNHSSYLAFTHGVPKWNAAYAQRLLLDPAAQVFFFCLVF--WVSAPHGMAMMPVFLLEMVHYFAYLQSLLQILGLAESPVVTLVTSKALVPLTALIISDPSFPALAT-RAKWAKLYTRMPQVAANIDVAIGVALILEMLTPSRNFLLLVLYWQVLRVRYMI--SPQLQEAFRSLHAMILTVVHHPRCPAMIAAVYGKIHAF---AVKMGD 397          
The following BLAST results are available for this feature:
BLAST of NO04G02560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28638.11.700e-13964.81stress-inducible protein [Nannochloropsis gaditana... [more]
CBN73810.12.000e-4734.68conserved unknown protein [Ectocarpus siliculosus][more]
CCA15570.11.100e-3730.42conserved hypothetical protein [Albugo laibachii N... [more]
CCI39425.11.900e-3730.12unnamed protein product [Albugo candida][more]
POM60779.13.600e-3631.45Transmembrane protein [Phytophthora palmivora var.... [more]
ETK83281.16.100e-3630.22hypothetical protein L915_11478 [Phytophthora para... [more]
XP_009834986.16.100e-3632.84hypothetical protein H257_10212 [Aphanomyces astac... [more]
XP_008864437.11.000e-3531.36hypothetical protein H310_02641 [Aphanomyces invad... [more]
ETO71879.15.200e-3529.98hypothetical protein F444_11864 [Phytophthora para... [more]
XP_008912168.16.800e-3529.98hypothetical protein PPTG_16395 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL081nonsL081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR111ngnoR111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009564NSK009564Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G02560.1NO04G02560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551680gene_2027Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100182g1gene1950Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G02560.1NO04G02560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G02560 ID=NO04G02560|Name=NO04G02560|organism=Nannochloropsis oceanica|type=gene|length=1579bp
AGACAAAGAGCCCGCTGTCCTCTTTGCTGCCTCTCCCCAGCAATACCTTT
TGTCACCACATTCATCATCGGTGGGGAATCACCGTGGCCGGCATAGAGCA
GGAGCAGCAGCGATGGACGACTGGGCCGAAGCCAAGGCCAAGGGCAACCA
GGCCTACCAAGCCGGGAACCATCAACAAGCTATCAAGCATTTCACGACTG
CGATCGAGCTGGAGACCCCCAAGAACACTGGAAAACAACTGCACATTTTG
TATTCGAACCGCTCGGCTGCCCAGCTCAGTTTGGGCCTAGCCCACGAGGC
GCTCATGGACGCCAAAAAATGCCAGGAACTGGAGCCGACATTTGCCAAAG
GCTGGAGCCGTGAGGGTGCTGCCTTGTATCGACTGGGACGGTTCTCCGAC
GCTATGGCGGCTTACGAAGCCGGGTTGCAGCAGACGCCGGGAAATGCGgt
aagtgagaagtttttggtgctctgtatgggatgataggggagggaaggat
tggaagtagactagtctgcgaaggcccgatattaatttggtcttctcttt
agccttctctttggtcttcataggcccgtggtcgttcattcactcaaact
atatcctcttatttactcacccgcattctccatccaccaccaatcctatc
accacctcacagGACCTGACCCGCGCCCTAGCCGAAGCCCGCAAAGCCGC
GGATCAAACGCGGGTTCCCACTCTCAACGAGCTTCTGCCTAAAATGCAAG
CATTTTTGCTGAAACACCGCTTGGACGGCCGGCTCTTCCTCCCCCGGATC
TTTCTTTTTCTCAATGCCTTTCTCTACCTCTTCCCGTTCCTCCTCCCCTC
CGGGTGGGGCCTAGCCAGCTATCGTCGTGCACTTTACACCATCGCGCTGA
TACACCTCTACTCTATCTACTACACCCATGGCATGCCGAAATTTAAAATC
GAATACCTGGCGCAAGTCATGCAAGACACGCATGCCCCCCCCCTCTTCCT
CTCCCTCCTCCTCCTCTCCTTCAAAGGTAAAGCTTATATCTTCGGCCTGA
CCCCCTTGCTGCTCACCGAAGGGATACAACTCCTATGGCTTTTCACCGAG
GTCCTTACTCTTGCCAAACCCATTTTCGGGAAATCCCTCTCCGCGCGCAA
CACAAGCCTTGCTTCACTTTACACTCAAAATCCGCAATATGGTGCCATCT
CCTCAGGCCCCGCACGGTGGCAAGCCATCTTCACCGCAACCATTTCGCAC
GCAATCACCCTTGAGATAGCCATGGGTCTTTTTCTGGTGTTGGAACTGTT
CACGCCCTGGCGGAACACGTTCGGCTTGTTCCTGTTTTGGCAGTATCTCC
AAATGAGGTACATGCTCGACAAAAGCGGCGAAGTCAAAAATAAATTCAAA
AAGTTGGACGAGTTTTTTTTGAATCTGACCAGTCACTCAAAGTGTCCCGG
GGTGGTAGGACAGGCCTATTCAATGCTGAGGGGGTATATGGGGAGGGCTG
TTGCGATGCCGGATCCTCAGCAGCAGCAGCAGCAGCAGCGTGGGGGTGGT
GGGTTGGGCCGGTGTAGTGTGATGTGAGG
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protein sequence of NO04G02560.1

>NO04G02560.1-protein ID=NO04G02560.1-protein|Name=NO04G02560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=417bp
MDDWAEAKAKGNQAYQAGNHQQAIKHFTTAIELETPKNTGKQLHILYSNR
SAAQLSLGLAHEALMDAKKCQELEPTFAKGWSREGAALYRLGRFSDAMAA
YEAGLQQTPGNADLTRALAEARKAADQTRVPTLNELLPKMQAFLLKHRLD
GRLFLPRIFLFLNAFLYLFPFLLPSGWGLASYRRALYTIALIHLYSIYYT
HGMPKFKIEYLAQVMQDTHAPPLFLSLLLLSFKGKAYIFGLTPLLLTEGI
QLLWLFTEVLTLAKPIFGKSLSARNTSLASLYTQNPQYGAISSGPARWQA
IFTATISHAITLEIAMGLFLVLELFTPWRNTFGLFLFWQYLQMRYMLDKS
GEVKNKFKKLDEFFLNLTSHSKCPGVVGQAYSMLRGYMGRAVAMPDPQQQ
QQQQRGGGGLGRCSVM*
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Synonyms
Publications