NO04G02160, NO04G02160 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G02160
Unique Name	NO04G02160
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2569
Alignment location	chr4:620127..622695 -

Link to JBrowse

Properties


Property Name	Value
Description	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:620127..622695 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0003824	catalytic activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036821	Peptide_deformylase_sf
IPR029045	ClpP/crotonase-like_dom
IPR001753	Crotonase_core_superfam
IPR023635	Peptide_deformylase

Homology

[Close]

BLAST of NO04G02160 vs. NCBI_GenBank
Match: EWM28568.1 (delta( )-delta( )-dienoyl- mitochondrial-like protein [Nannochloropsis gaditana])

HSP 1 Score: 446.8 bits (1148), Expect = 1.100e-121
Identity = 234/324 (72.22%), Postives = 263/324 (81.17%), Query Frame = 0

Query:  285 MLSRVLALARCPAAATGFLTTRLALCPHPIIRAASSATTAMRYETLAIDKGKADAPGVVFIKMNRPQKRNAMNSKFWGECKAAFEALGEDGDVRAIVLMGEGKVFTSGLDLSDIGIDLMGGGGDG-----VDVARQALKIKKHVTRMQDAFNAIEKIPQPVIAAIHGACIGGGVDLIAACDIRLASAETVFSIKEVDIGLAADLGTLQRLPRITGNESLLRELAFTGRNFNCTEGQLLGLFSRVLPSPTETIAAATALAVEIANKSPVAVTGTKVNLLYSRDHASVQDGLNHMTTWNMSALQSEDIGRAVQGAITKEVPTYSKL 604
            ML R+  L   P  A   L   +   P      AS+A   M +ETL I+  ++DAPGV F+ +NRP+KRNAMNSKFWGECK  F+ LGE+G+VRA+VL G GKVFTSGLDLSDIGIDLMGG G G     VDVARQA KIK+HVTRMQ+AFNAIE+IPQPV+AAIHGACIGGG+DLIAACDIR A AET+FSIKEVDIGLAADLGTLQRLPR+TGNESLLRELAFTGRNF+  EGQ LGL S VLPSP ET+A AT LA+EIA KSPVAV GTK NLLYSRDH SVQDGLN+MTTWNM+ALQSEDIG+AVQGA+ KE PT+SKL
Sbjct:    1 MLLRLSNLGHRPVLA---LQRHIGTYPAKFTTGASTARREMHFETLTIETNRSDAPGVAFVTINRPRKRNAMNSKFWGECKEVFDTLGEEGEVRAVVLAGAGKVFTSGLDLSDIGIDLMGGSGGGSEGESVDVARQAFKIKRHVTRMQEAFNAIERIPQPVVAAIHGACIGGGIDLIAACDIRYACAETIFSIKEVDIGLAADLGTLQRLPRVTGNESLLRELAFTGRNFSSAEGQALGLLSSVLPSPAETLARATGLAMEIARKSPVAVAGTKANLLYSRDH-SVQDGLNYMTTWNMAALQSEDIGKAVQGAMLKERPTFSKL 320

[Close]

BLAST of NO04G02160 vs. NCBI_GenBank
Match: EWM28596.1 (peptide deformylase [Nannochloropsis gaditana])

HSP 1 Score: 382.5 bits (981), Expect = 2.400e-102
Identity = 195/265 (73.58%), Postives = 216/265 (81.51%), Query Frame = 0

Query:    1 MAVVATXXXXXXXXXGRASATTASVLRPRRPSLLPAFLPPFPLTTTAIRGVRSRPGPALGGSLANSIRLAWVKVLGSALAEEVDPGEVEGTDLRVLKYPDPRLRASNAEITDFGPEVAALAKDMFKVMYAMNGVGLAAPQVGVNQRLMVFNPMGDKVKWLNEVVLCNPVIVERSGKTEVAEEGCLSFPGMAGDVERSLVIKVTFQNAKGKTVTKKFRDWEARIFQHEYDHLDGVVYIDRLLPESKEKVQPVLDKLVADFGPGGAL 266
            MA VAT          RAS   A       P   P+   P   T  + RG+R+R GP  G ++ANSIR AW  +L S + EEVDPGEVEGTDLRVLKYPDPRLRA+NAEIT+FGPEVAALAKDMFKVMYAMNGVGLAAPQVGVNQRLMVFNP GD++KWLNEV+LCNP IVE+SGKT++ EEGCLSFPGMAGDVERSL IKVTFQNAKGK  TKKFRDWEARIFQHEYDHLDGV+Y+DRL+PESK+KVQPVLDKLV+DFGPGGAL
Sbjct:   10 MAAVATTATLFFLGRARASPLVAQAAF-HAPRGSPSSYSPAGATLVS-RGIRTRSGP--GSAIANSIRHAWGTLLRSTMVEEVDPGEVEGTDLRVLKYPDPRLRAANAEITEFGPEVAALAKDMFKVMYAMNGVGLAAPQVGVNQRLMVFNPQGDRLKWLNEVILCNPAIVEKSGKTDIMEEGCLSFPGMAGDVERSLTIKVTFQNAKGKKFTKKFRDWEARIFQHEYDHLDGVLYMDRLVPESKQKVQPVLDKLVSDFGPGGAL 270

[Close]

BLAST of NO04G02160 vs. NCBI_GenBank
Match: XP_024433389.1 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial isoform X1 [Desmodus rotundus])

HSP 1 Score: 290.8 bits (743), Expect = 9.700e-75
Identity = 154/291 (52.92%), Postives = 201/291 (69.07%), Query Frame = 0

Query:  316 RAASSATTAMRYETLAIDKGKADAPGVVFIKMNRPQKRNAMNSKFWGECKAAFEALGEDGDVRAIVLMGEGKVFTSGLDLSDIGIDLMGGGGDGVDVARQALKIKKHVTRMQDAFNAIEKIPQPVIAAIHGACIGGGVDLIAACDIRLASAETVFSIKEVDIGLAADLGTLQRLPRITGNESLLRELAFTGRNFNCTEGQLLGLFSRVLPSPTETIAAATALAVEIANKSPVAVTGTKVNLLYSRDHASVQDGLNHMTTWNMSALQSEDIGRAVQGAITK---EVPTYSKL 604
            RAA S      YE+L +   +     ++ +++NRP+KRNAMN  FW E    F  + +D D RA+V+ G GK+FT+G+DL D+  D++   GD  DVAR +  ++  +TR Q+ F+ IEK P+PVIAAIHG CIGGGVDLI ACDIR  + +  F +KEVD+GLAAD+GTLQRLPR+ GN+SL+ ELAFT R     E    GL SRV P     + AA ALA EI++KSPVAV GTKVNLLYSRDH SV +GLN+MT+WNMS LQ++DI ++VQ A+ K   +  T+SKL
Sbjct:   44 RAAPSEAPHHNYESLRVTTAQRH---ILHVQLNRPEKRNAMNKAFWREMVECFNEIAQDADCRAVVISGAGKMFTAGIDLMDMASDILQPQGD--DVARTSWHLRNLITRYQETFSVIEKCPKPVIAAIHGGCIGGGVDLITACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPRVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLEAAFALAAEISSKSPVAVQGTKVNLLYSRDH-SVAEGLNYMTSWNMSMLQTQDIVKSVQAAVEKKDLKSVTFSKL 328

[Close]

BLAST of NO04G02160 vs. NCBI_GenBank
Match: XP_024433390.1 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial isoform X2 [Desmodus rotundus])

HSP 1 Score: 290.8 bits (743), Expect = 9.700e-75
Identity = 154/291 (52.92%), Postives = 201/291 (69.07%), Query Frame = 0

Query:  316 RAASSATTAMRYETLAIDKGKADAPGVVFIKMNRPQKRNAMNSKFWGECKAAFEALGEDGDVRAIVLMGEGKVFTSGLDLSDIGIDLMGGGGDGVDVARQALKIKKHVTRMQDAFNAIEKIPQPVIAAIHGACIGGGVDLIAACDIRLASAETVFSIKEVDIGLAADLGTLQRLPRITGNESLLRELAFTGRNFNCTEGQLLGLFSRVLPSPTETIAAATALAVEIANKSPVAVTGTKVNLLYSRDHASVQDGLNHMTTWNMSALQSEDIGRAVQGAITK---EVPTYSKL 604
            RAA S      YE+L +   +     ++ +++NRP+KRNAMN  FW E    F  + +D D RA+V+ G GK+FT+G+DL D+  D++   GD  DVAR +  ++  +TR Q+ F+ IEK P+PVIAAIHG CIGGGVDLI ACDIR  + +  F +KEVD+GLAAD+GTLQRLPR+ GN+SL+ ELAFT R     E    GL SRV P     + AA ALA EI++KSPVAV GTKVNLLYSRDH SV +GLN+MT+WNMS LQ++DI ++VQ A+ K   +  T+SKL
Sbjct:   11 RAAPSEAPHHNYESLRVTTAQRH---ILHVQLNRPEKRNAMNKAFWREMVECFNEIAQDADCRAVVISGAGKMFTAGIDLMDMASDILQPQGD--DVARTSWHLRNLITRYQETFSVIEKCPKPVIAAIHGGCIGGGVDLITACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPRVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLEAAFALAAEISSKSPVAVQGTKVNLLYSRDH-SVAEGLNYMTSWNMSMLQTQDIVKSVQAAVEKKDLKSVTFSKL 295

[Close]

BLAST of NO04G02160 vs. NCBI_GenBank
Match: XP_005886041.1 (PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [Myotis brandtii] >EPQ20080.1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [Myotis brandtii])

HSP 1 Score: 288.9 bits (738), Expect = 3.700e-74
Identity = 152/291 (52.23%), Postives = 200/291 (68.73%), Query Frame = 0

Query:  316 RAASSATTAMRYETLAIDKGKADAPGVVFIKMNRPQKRNAMNSKFWGECKAAFEALGEDGDVRAIVLMGEGKVFTSGLDLSDIGIDLMGGGGDGVDVARQALKIKKHVTRMQDAFNAIEKIPQPVIAAIHGACIGGGVDLIAACDIRLASAETVFSIKEVDIGLAADLGTLQRLPRITGNESLLRELAFTGRNFNCTEGQLLGLFSRVLPSPTETIAAATALAVEIANKSPVAVTGTKVNLLYSRDHASVQDGLNHMTTWNMSALQSEDIGRAVQGAITKEVP---TYSKL 604
            RAA S      YE+L +   +     ++ +++NRP+KRNAMN  FW E    F  + +D D RA+V+ G GK+FT+G+DL D+  DL+   GD  DVAR +  ++  + R Q+ F+ IEK P+PVIAAIHG CIGGGVDLI ACDIR  + +  F +KEVD+GLAAD+GTLQRLPR+ GN+SL+ ELAFT R     E    GL SR+ P     + AA  LA EI++KSPVAV GTK+NLLYSRDH SV +GLN+MT+WNMS LQ++DI ++VQ A+ K+ P   T+SKL
Sbjct:   44 RAAPSEAPHHNYESLRVTAAQRH---ILHVQLNRPEKRNAMNKAFWSEMVECFNKIAQDADCRAVVISGAGKMFTAGIDLVDMASDLLQPQGD--DVARISWYLRSLIARYQETFSVIEKCPKPVIAAIHGGCIGGGVDLITACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPRVIGNQSLVNELAFTARKMMADEALSSGLVSRIFPDKEVMLDAAFNLAAEISSKSPVAVQGTKINLLYSRDH-SVAEGLNYMTSWNMSMLQTQDIVKSVQAAMEKKEPKSVTFSKL 328

[Close]

BLAST of NO04G02160 vs. NCBI_GenBank
Match: XP_004617339.1 (PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [Sorex araneus])

HSP 1 Score: 287.0 bits (733), Expect = 1.400e-73
Identity = 153/291 (52.58%), Postives = 201/291 (69.07%), Query Frame = 0

Query:  316 RAASSATTAMRYETLAIDKGKADAPGVVFIKMNRPQKRNAMNSKFWGECKAAFEALGEDGDVRAIVLMGEGKVFTSGLDLSDIGIDLMGGGGDGVDVARQALKIKKHVTRMQDAFNAIEKIPQPVIAAIHGACIGGGVDLIAACDIRLASAETVFSIKEVDIGLAADLGTLQRLPRITGNESLLRELAFTGRNFNCTEGQLLGLFSRVLPSPTETIAAATALAVEIANKSPVAVTGTKVNLLYSRDHASVQDGLNHMTTWNMSALQSEDIGRAVQGAITK---EVPTYSKL 604
            R A S      YE+L   K  +    ++ +++NRP+KRNAMN  FW E    F  + +D D RA+V+ GEGK+FT+G+DL D+  DL+   GD  DVAR +  ++  ++R Q+ F+ IEK P+PVIAAIHG CIGGGVDLI ACDIR  + +  F +KEVD+GLAAD+GTLQRLP+I GN+SL+ ELAFT R     E    GL SRV P     + AA ALA EIA+KSPVAV GTKVNL+YSRDH SV +GLN+M++WNM+ LQ++DI ++VQ A+ K   +  T+SKL
Sbjct:   89 RVAPSEAPGHSYESL---KVTSSMKHILHVQLNRPEKRNAMNKAFWREMVECFNKIAQDADCRAVVISGEGKIFTAGIDLMDMASDLLQPRGD--DVARISWYLRDLISRYQETFSVIEKCPKPVIAAIHGGCIGGGVDLITACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKIVGNQSLVNELAFTSRKMMADEALGCGLVSRVFPDRETMLDAAFALAAEIASKSPVAVQGTKVNLIYSRDH-SVSEGLNYMSSWNMAMLQTDDIMKSVQAAMEKKDLKSVTFSKL 373

[Close]

BLAST of NO04G02160 vs. NCBI_GenBank
Match: XP_007524028.2 (PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [Erinaceus europaeus])

HSP 1 Score: 285.8 bits (730), Expect = 3.100e-73
Identity = 153/291 (52.58%), Postives = 200/291 (68.73%), Query Frame = 0

Query:  316 RAASSATTAMRYETLAIDKGKADAPGVVFIKMNRPQKRNAMNSKFWGECKAAFEALGEDGDVRAIVLMGEGKVFTSGLDLSDIGIDLMGGGGDGVDVARQALKIKKHVTRMQDAFNAIEKIPQPVIAAIHGACIGGGVDLIAACDIRLASAETVFSIKEVDIGLAADLGTLQRLPRITGNESLLRELAFTGRNFNCTEGQLLGLFSRVLPSPTETIAAATALAVEIANKSPVAVTGTKVNLLYSRDHASVQDGLNHMTTWNMSALQSEDIGRAVQGAITKEV---PTYSKL 604
            RAASS      YE+L +    A    ++ +++NRP+KRNAMN  FW E    F  + +D D RA+V+ G GK+FTSG+DL D+  DL+   GD  DVAR +  ++K ++  Q+ F+ IEK P+PVIAA+HG CIGGG+DLI ACDIR  + +  F +KEVD+GLAAD+GTLQRLPR+ GN+SL+ ELAFT R     E    GL SRV P     + AA ALA EI++KSPVAV G+K+NLLYSRDH SV DGLN MT+WNM  LQ++DI ++VQ A+ K+     T+SKL
Sbjct:   43 RAASSEVPDHNYESLRV---TAAQKHILHVQINRPEKRNAMNRAFWSEMVECFNKIAQDADCRAVVISGAGKMFTSGIDLVDMASDLLQPKGD--DVARISWYLRKLISTCQETFSVIEKCPKPVIAAVHGGCIGGGMDLITACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPRVIGNQSLVNELAFTARKMMADEALNCGLVSRVFPDKDVMLDAAFALAAEISSKSPVAVQGSKINLLYSRDH-SVADGLNFMTSWNMGMLQTDDIMKSVQAAMEKKKLKDVTFSKL 327

[Close]

BLAST of NO04G02160 vs. NCBI_GenBank
Match: XP_022808772.1 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like isoform X2 [Stylophora pistillata] >PFX13669.1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [Stylophora pistillata])

HSP 1 Score: 285.8 bits (730), Expect = 3.100e-73
Identity = 148/284 (52.11%), Postives = 193/284 (67.96%), Query Frame = 0

Query:  320 SATTAMRYETLAIDKGKADAPGVVFIKMNRPQKRNAMNSKFWGECKAAFEALGEDGDVRAIVLMGEGKVFTSGLDLSDIGIDLMGGGGDGVDVARQALKIKKHVTRMQDAFNAIEKIPQPVIAAIHGACIGGGVDLIAACDIRLASAETVFSIKEVDIGLAADLGTLQRLPRITGNESLLRELAFTGRNFNCTEGQLLGLFSRVLPSPTETIAAATALAVEIANKSPVAVTGTKVNLLYSRDHASVQDGLNHMTTWNMSALQSEDIGRAVQGAITKEVPTYSKL 604
            ++T   ++ETLA+ K       V+ +++NRP KRNAMN  FW E    F  + +D D RA+VL G GK+FT+GLDL D+G +LM      ++ +R+A  ++K +  +QD+F  IEK PQPVIAA H AC+GGGVD+I +CDIRL S++  F IKE+DIGLAADLGTLQ+ P+I GN+SL REL FTGR F   E    G  SRV P     +  A  LA +IA KSPVA+ GTK NL +SRDH S Q+GL +M TWNM+ LQ+EDI +AVQ  + KE P +SKL
Sbjct:   46 NSTEPYKFETLAVTK---PLDHVIQVELNRPDKRNAMNGTFWREMVDCFRQIADDADCRAVVLTGAGKIFTAGLDLMDMGSNLM---SSDLEPSRRAHLLRKLILFLQDSFRTIEKCPQPVIAAFHSACVGGGVDMICSCDIRLCSSDAWFQIKEIDIGLAADLGTLQKFPKIIGNDSLARELCFTGRRFTAEEALQFGFVSRVSPGRDSLVKEALELAGQIAKKSPVAMAGTKHNLNFSRDH-SAQEGLEYMATWNMAMLQTEDILKAVQSGMNKEEPVFSKL 322

[Close]

BLAST of NO04G02160 vs. NCBI_GenBank
Match: XP_022808771.1 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like isoform X1 [Stylophora pistillata])

HSP 1 Score: 285.8 bits (730), Expect = 3.100e-73
Identity = 148/284 (52.11%), Postives = 193/284 (67.96%), Query Frame = 0

Query:  320 SATTAMRYETLAIDKGKADAPGVVFIKMNRPQKRNAMNSKFWGECKAAFEALGEDGDVRAIVLMGEGKVFTSGLDLSDIGIDLMGGGGDGVDVARQALKIKKHVTRMQDAFNAIEKIPQPVIAAIHGACIGGGVDLIAACDIRLASAETVFSIKEVDIGLAADLGTLQRLPRITGNESLLRELAFTGRNFNCTEGQLLGLFSRVLPSPTETIAAATALAVEIANKSPVAVTGTKVNLLYSRDHASVQDGLNHMTTWNMSALQSEDIGRAVQGAITKEVPTYSKL 604
            ++T   ++ETLA+ K       V+ +++NRP KRNAMN  FW E    F  + +D D RA+VL G GK+FT+GLDL D+G +LM      ++ +R+A  ++K +  +QD+F  IEK PQPVIAA H AC+GGGVD+I +CDIRL S++  F IKE+DIGLAADLGTLQ+ P+I GN+SL REL FTGR F   E    G  SRV P     +  A  LA +IA KSPVA+ GTK NL +SRDH S Q+GL +M TWNM+ LQ+EDI +AVQ  + KE P +SKL
Sbjct:   54 NSTEPYKFETLAVTK---PLDHVIQVELNRPDKRNAMNGTFWREMVDCFRQIADDADCRAVVLTGAGKIFTAGLDLMDMGSNLM---SSDLEPSRRAHLLRKLILFLQDSFRTIEKCPQPVIAAFHSACVGGGVDMICSCDIRLCSSDAWFQIKEIDIGLAADLGTLQKFPKIIGNDSLARELCFTGRRFTAEEALQFGFVSRVSPGRDSLVKEALELAGQIAKKSPVAMAGTKHNLNFSRDH-SAQEGLEYMATWNMAMLQTEDILKAVQSGMNKEEPVFSKL 330

[Close]

BLAST of NO04G02160 vs. NCBI_GenBank
Match: XP_022808773.1 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like isoform X3 [Stylophora pistillata])

HSP 1 Score: 285.8 bits (730), Expect = 3.100e-73
Identity = 148/284 (52.11%), Postives = 193/284 (67.96%), Query Frame = 0

Query:  320 SATTAMRYETLAIDKGKADAPGVVFIKMNRPQKRNAMNSKFWGECKAAFEALGEDGDVRAIVLMGEGKVFTSGLDLSDIGIDLMGGGGDGVDVARQALKIKKHVTRMQDAFNAIEKIPQPVIAAIHGACIGGGVDLIAACDIRLASAETVFSIKEVDIGLAADLGTLQRLPRITGNESLLRELAFTGRNFNCTEGQLLGLFSRVLPSPTETIAAATALAVEIANKSPVAVTGTKVNLLYSRDHASVQDGLNHMTTWNMSALQSEDIGRAVQGAITKEVPTYSKL 604
            ++T   ++ETLA+ K       V+ +++NRP KRNAMN  FW E    F  + +D D RA+VL G GK+FT+GLDL D+G +LM      ++ +R+A  ++K +  +QD+F  IEK PQPVIAA H AC+GGGVD+I +CDIRL S++  F IKE+DIGLAADLGTLQ+ P+I GN+SL REL FTGR F   E    G  SRV P     +  A  LA +IA KSPVA+ GTK NL +SRDH S Q+GL +M TWNM+ LQ+EDI +AVQ  + KE P +SKL
Sbjct:    2 NSTEPYKFETLAVTK---PLDHVIQVELNRPDKRNAMNGTFWREMVDCFRQIADDADCRAVVLTGAGKIFTAGLDLMDMGSNLM---SSDLEPSRRAHLLRKLILFLQDSFRTIEKCPQPVIAAFHSACVGGGVDMICSCDIRLCSSDAWFQIKEIDIGLAADLGTLQKFPKIIGNDSLARELCFTGRRFTAEEALQFGFVSRVSPGRDSLVKEALELAGQIAKKSPVAMAGTKHNLNFSRDH-SAQEGLEYMATWNMAMLQTEDILKAVQSGMNKEEPVFSKL 278

The following BLAST results are available for this feature:

BLAST of NO04G02160 vs. NCBI_GenBank

BLAST of NO04G02160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM28568.1	1.100e-121	72.22	delta( )-delta( )-dienoyl- mitochondrial-like prot...	[more]
EWM28596.1	2.400e-102	73.58	peptide deformylase [Nannochloropsis gaditana]	[more]
XP_024433389.1	9.700e-75	52.92	delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc...	[more]
XP_024433390.1	9.700e-75	52.92	delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc...	[more]
XP_005886041.1	3.700e-74	52.23	PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA isome...	[more]
XP_004617339.1	1.400e-73	52.58	PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA isome...	[more]
XP_007524028.2	3.100e-73	52.58	PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA isome...	[more]
XP_022808772.1	3.100e-73	52.11	delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc...	[more]
XP_022808771.1	3.100e-73	52.11	delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc...	[more]
XP_022808773.1	3.100e-73	52.11	delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL079	nonsL079	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR059	ncniR059	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR109	ngnoR109	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK009583	NSK009583	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO04G02160.1	NO04G02160.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|659806	gene_2007	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100009g109	gene1966	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO04G02160.1	NO04G02160.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO04G02160 ID=NO04G02160|Name=NO04G02160|organism=Nannochloropsis oceanica|type=gene|length=2569bp
ATGGCTGTCGTCGCAACCACCGCCACAACCACCCTCCTCCTCCTTGGCCG
CGCCTCCGCCACCACAGCATCCGTCCTGCGTCCCCGGCGCCCGAGTCTGC
TACCTGCATTCCTCCCTCCCTTCCCCCTCACAACCACAGCCATCCGTGGT
GTTCGTTCTCGCCCTGGTCCTGCGCTTGGCGGCAGCCTAGCCAATTCCAT
TCGGCTAGCATGGGTCAAGGTTCTTGGCTCGGCGCTAGCGGAGGAAGTCG
ACCCCGGCGAGGTGGAAGGAACGGATCTACGTGTGCTCAAGTACCCCGAC
CCCCGTCTTCGAGCCTCCAACGCAGAAATCACAGACTTTGGCCCGGAAGT
GGCGGCCTTGGCAAAGGATATGTTTAAAGTGATGTACGCGATGAACGGGG
TAGGATTGGCAGCACCGCAAGTAGGTGTGAATCAACGTCTGATGGTTTTT
AACCCCATGGGGGATAAAGTGAAGTGGCTGAACGAGGTGGTGTTGTGCAA
CCCTGTGATTGTTGAGAGGTCGGGCAAGACGGAAGTTGCAGAGGAGGGGT
GTTTGTCGTTTCCGGGTATGGCTGGCGATgtacgtatgcagagagggatg
aagggagggagggagggagggaggagaggatagagcgagcaaagggacgg
catgaagagggtaatcagattttgtgcgcgtgcttatttttatgtctgtc
tttttttgggcatattgcagGTTGAGCGCTCGCTCGTTATTAAGGTGACA
TTCCAAAACGCCAAGGGAAAGACTGTCACCAAGAAATTTCGTGATTGGGA
GGCGCGCATTTTCCAGCATGAGTACGACCATTTGGACGGCGTAGTGTATA
TTGATAGGCTCTTGCCAGAGTCGAAGGAGAAGgtatgtttgcgaaatgac
ggacgagagggagattaatgtggtgcgataggtgtgtgttcgtttcaagt
acgagtgagaaggagcgccgcctgactgaggccagagtaaaatcttaagc
tggggaatgggaacaaagggagcgatagtgcggaaagagtgatctgatga
gctgacgagttaacattatatccccaaaaacagGTGCAGCCGGTGTTAGA
CAAGTTGGTTGCTGACTTTGGCCCGGGCGGAGCTTTgtgaggaggtttgg
gatgtctcacagaagatgtgttgcagtgcgcaggcattttttttagcaga
ccgagtcaatcccgacatgtaatgaacttctcagtgaaagaagagaacgc
aaacgaatgactaacaccgtggagttacctgttgctatctttccccttgc
ccggtgcagtaatgggccaagctcaagcgaggcgtgatcatgccccactc
ttttactttgctttgcctgcccgaaacaagcatgacttaccccactctga
ctaaccagtgcatgctgtactctcggaaaaagttgtagcatcgacgacgt
gcggcctgcctcgctgttgttgcaatagatagtctcttcatcgatatcgt
tcatgaaccccagtccacgcctcatcgacaacgcccctcgtccaacaaca
gGCCAGAGCAACAACCTCTTCGCAGCTGTAAGACCACGCCCGCCAGCTGC
TTGTTCTTTATGCTGTCTCGTGTTTTGGCCCTGGCCCGTTGTCCTGCTGC
CGCTACCGGCTTTTTGACGACCCGTCTCGCCCTCTGTCCTCACCCTATCA
TCCGCGCTGCTTCCTCTGCTACCACAGCTATGAGGTACGAGACACTGGCG
ATCGATAAAGGAAAGGCCGATGCCCCAGGCGTTGTTTTTATCAAAATGAA
TCGCCCTCAAAAGCGCAATGCGATGAACAGCAAGTTCTGGGGCGAATGCA
AAGCCGCTTTCGAGGCGCTAGGGGAGGATGGAGACGTGCGTGCTATTGTG
CTTATGGGGGAAGGGAAGGTTTTTACCTCTGGCTTGGATTTGTCAGATAT
CGGTATCGATTTGATGGGAGGGGGTGGGGATGGGGTGGACGTGGCGCGGC
AGGCTTTGAAGATTAAGAAGCATGTGACGCGGATGCAAGACGCTTTCAAC
GCTATTGAGAAAATTCCCCAGCCAGTCATTGCTGCCATCCATGGGGCATG
CATCGGGGGGGGGGTCGACCTGATCGCGGCGTGTGACATTCGTTTGGCGT
CGGCCGAGACAGTTTTCAGTATCAAGGAGGTGGACATTGGTTTGGCTGCT
GACCTTGGCACGTTGCAGCGACTCCCACGCATAACGGGGAATGAGAGTCT
ACTCCGCGAGCTTGCTTTCACTGGCCGAAACTTCAATTGTACCGAAGGCC
AGCTTCTCGGATTGTTCAGCCGTGTCTTACCTTCCCCTACCGAGACAATT
GCAGCTGCTACGGCTTTGGCGGTCGAGATAGCGAATAAGAGTCCCGTGGC
AGTGACGGGGACGAAAGTGAATCTGCTTTATTCGCGGGACCACGCGTCGG
TGCAGGACGGGTTGAATCATATGACGACGTGGAATATGAGTGCTTTACAG
AGTGAGGATATTGGAAGGGCTGTCCAGGGGGCGATCACAAAGGAGGTGCC
GACTTATTCGAAGCTGTAG

protein sequence of NO04G02160.1

>NO04G02160.1-protein ID=NO04G02160.1-protein|Name=NO04G02160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=604bp
MAVVATTATTTLLLLGRASATTASVLRPRRPSLLPAFLPPFPLTTTAIRG
VRSRPGPALGGSLANSIRLAWVKVLGSALAEEVDPGEVEGTDLRVLKYPD
PRLRASNAEITDFGPEVAALAKDMFKVMYAMNGVGLAAPQVGVNQRLMVF
NPMGDKVKWLNEVVLCNPVIVERSGKTEVAEEGCLSFPGMAGDVERSLVI
KVTFQNAKGKTVTKKFRDWEARIFQHEYDHLDGVVYIDRLLPESKEKVQP
VLDKLVADFGPGGALPEQQPLRSCKTTPASCLFFMLSRVLALARCPAAAT
GFLTTRLALCPHPIIRAASSATTAMRYETLAIDKGKADAPGVVFIKMNRP
QKRNAMNSKFWGECKAAFEALGEDGDVRAIVLMGEGKVFTSGLDLSDIGI
DLMGGGGDGVDVARQALKIKKHVTRMQDAFNAIEKIPQPVIAAIHGACIG
GGVDLIAACDIRLASAETVFSIKEVDIGLAADLGTLQRLPRITGNESLLR
ELAFTGRNFNCTEGQLLGLFSRVLPSPTETIAAATALAVEIANKSPVAVT
GTKVNLLYSRDHASVQDGLNHMTTWNMSALQSEDIGRAVQGAITKEVPTY
SKL*

Synonyms

Publications