NO04G01220, NO04G01220 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G01220
Unique Name	NO04G01220
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4913
Alignment location	chr4:380926..385838 +

Link to JBrowse

Properties


Property Name	Value
Description	Tubulin beta chain

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:380926..385838 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005200	structural constituent of cytoskeleton
GO:0005525	GTP binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005874	microtubule

Vocabulary: **Biological Process**
Term	Definition
GO:0007017	microtubule-based process

Vocabulary: **INTERPRO**
Term	Definition
IPR036525	Tubulin/FtsZ_GTPase_sf
IPR008280	Tub_FtsZ_C
IPR003008	Tubulin_FtsZ_GTPase
IPR018316	Tubulin/FtsZ_2-layer-sand-dom
IPR002453	Beta_tubulin
IPR000217	Tubulin

Homology

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BLAST of NO04G01220 vs. NCBI_GenBank
Match: XP_005852742.1 (tubulin beta [Nannochloropsis gaditana CCMP526] >EKU23091.1 tubulin beta [Nannochloropsis gaditana CCMP526] >EWM28533.1 beta-tubulin [Nannochloropsis gaditana])

HSP 1 Score: 914.8 bits (2363), Expect = 1.000e-262
Identity = 442/447 (98.88%), Postives = 446/447 (99.78%), Query Frame = 0

Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGSYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLRMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEAEEVMA 448
            MREIVHVQAGQCGNQIGAKFWEVI+DEHGVDPTG+YHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGL+MSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEE EE+MA
Sbjct:    1 MREIVHVQAGQCGNQIGAKFWEVIADEHGVDPTGAYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEVEEMMA 447

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BLAST of NO04G01220 vs. NCBI_GenBank
Match: XP_009035452.1 (tubulin beta chain [Aureococcus anophagefferens] >XP_009036750.1 tubulin beta chain [Aureococcus anophagefferens] >XP_009039073.1 tubulin beta chain [Aureococcus anophagefferens] >EGB06117.1 tubulin beta chain [Aureococcus anophagefferens] >EGB08765.1 tubulin beta chain [Aureococcus anophagefferens] >EGB09376.1 tubulin beta chain [Aureococcus anophagefferens])

HSP 1 Score: 893.6 bits (2308), Expect = 2.400e-256
Identity = 421/446 (94.39%), Postives = 442/446 (99.10%), Query Frame = 0

Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGSYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLRMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEAEEVM 447
            MREIVH+Q GQCGNQIGAKFWEVISDEHGVDPTG+YHGDSDLQLERINVY+NEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYS+IPSPKVSDTVVEPYNATLSVHQLVEN+DQCF LDNEALYDICFRTLKLTTPTYGDLNHL++AA+CGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTC+C+FRGRMSTKEVDEQMLNV+NKNSSYFVEWIPNNVK++ICDIPPKGL+MSTTFIGNSTA+QE WKRV++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEE +++M
Sbjct:    1 MREIVHIQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENSDQCFTLDNEALYDICFRTLKLTTPTYGDLNHLIAAALCGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCSCLFRGRMSTKEVDEQMLNVINKNSSYFVEWIPNNVKSAICDIPPKGLKMSTTFIGNSTAIQETWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEGDDMM 446

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BLAST of NO04G01220 vs. NCBI_GenBank
Match: P30156.1 (RecName: Full=Tubulin beta-5 chain; AltName: Full=Beta-5-tubulin >AAA33284.1 beta-tubulin [Ectocarpus variabilis] >CBJ30701.1 beta tubulin [Ectocarpus siliculosus])

HSP 1 Score: 889.4 bits (2297), Expect = 4.600e-255
Identity = 425/446 (95.29%), Postives = 439/446 (98.43%), Query Frame = 0

Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGSYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLRMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEAEEVM 447
            MREIVHVQAGQCGNQIG+KFWEVISDEHG+DPTGSYHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTGAGMGTLLISK+REEYPDRVMSTYS+IPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGL+MSTTF+GN+TA+QEVWKRV++QFT+MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEE ++ M
Sbjct:    1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEELDDAM 446

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BLAST of NO04G01220 vs. NCBI_GenBank
Match: CBJ26065.1 (beta tubulin [Ectocarpus siliculosus])

HSP 1 Score: 887.9 bits (2293), Expect = 1.300e-254
Identity = 424/446 (95.07%), Postives = 439/446 (98.43%), Query Frame = 0

Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGSYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLRMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEAEEVM 447
            MREIVHVQAGQCGNQIG+KFWEVISDEHG+DPTG+YHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTGAGMGTLLISK+REEYPDR+MSTYS+IPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGL+MSTTF+GN+TA+QEVWKRV++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEE ++ M
Sbjct:    1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGAYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRIMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEELDDGM 446

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BLAST of NO04G01220 vs. NCBI_GenBank
Match: CBN79446.1 (beta tubulin [Ectocarpus siliculosus])

HSP 1 Score: 886.7 bits (2290), Expect = 3.000e-254
Identity = 423/446 (94.84%), Postives = 438/446 (98.21%), Query Frame = 0

Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGSYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLRMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEAEEVM 447
            MREIVHVQAGQCGNQIG+KFWEVISDEHG+DPTG YHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTGAGMGTLLISK+REEYPDR+MSTYS+IPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICD+PPKGL+MSTTF+GN+TA+QEVWKRV++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEE ++ M
Sbjct:    1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGVYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRIMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDVPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEELDDQM 446

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BLAST of NO04G01220 vs. NCBI_GenBank
Match: P30157.1 (RecName: Full=Tubulin beta-6 chain; AltName: Full=Beta-6-tubulin >AAA33285.1 beta-tubulin [Ectocarpus variabilis])

HSP 1 Score: 884.8 bits (2285), Expect = 1.100e-253
Identity = 423/446 (94.84%), Postives = 437/446 (97.98%), Query Frame = 0

Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGSYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLRMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEAEEVM 447
            MREIVHVQAGQCGNQIG+KFWEVISDEHG+DPTG YHGDSDLQLERIN YFNEAT GRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTGAGMGTLLISK+REEYPDR+MSTYS+IPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGL+MSTTF+GN+TA+QEVWKRV++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEE ++ M
Sbjct:    1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGRYHGDSDLQLERINCYFNEATAGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRIMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEELDDGM 446

[Close]

BLAST of NO04G01220 vs. NCBI_GenBank
Match: CBJ26064.1 (beta tubulin [Ectocarpus siliculosus])

HSP 1 Score: 882.1 bits (2278), Expect = 7.300e-253
Identity = 421/442 (95.25%), Postives = 436/442 (98.64%), Query Frame = 0

Query:    5 VHVQAGQCGNQIGAKFWEVISDEHGVDPTGSYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLRMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEAEEVM 447
            VHVQAGQCGNQIG+KFWEVISDEHG+DPTG+YHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQ+THSMGGGTGAGMGTLLISKIREEYPDRVMSTYS+IPSPKVSDTVVEPYNATLSVHQLVENADQCF+LDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGL+MSTTF+GN+TA+QEVWKRV++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEE ++ M
Sbjct:   32 VHVQAGQCGNQIGSKFWEVISDEHGIDPTGAYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQMTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFMLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEELDDAM 473

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BLAST of NO04G01220 vs. NCBI_GenBank
Match: Q9LKI8.1 (RecName: Full=Tubulin beta chain; AltName: Full=Beta-tubulin [Conticribra weissflogii] >AAF81906.1 beta-tubulin [Conticribra weissflogii])

HSP 1 Score: 875.5 bits (2261), Expect = 6.800e-251
Identity = 413/440 (93.86%), Postives = 433/440 (98.41%), Query Frame = 0

Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGSYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLRMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDE 441
            MREIVH+Q GQCGNQIGAKFWEV+SDEHGVDPTG+YHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDC+QGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYS+IPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHL++AA+CGTTC LRFPGQLNCDLRKLAVNMVPFPRLHFFM+G+APLTSRGSQQYRALTVPELTQQ FDAKNMMCAADPRHGRYLTCA +FRGRMS+KEVDEQMLNVVNK+SSYFVEWIPNNVKASICDIPPKGL+M+TTF+GN+TAVQE WKRV++QFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA+EEGEFDEDE
Sbjct:    1 MREIVHIQGGQCGNQIGAKFWEVMSDEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCMQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFALDNEALYDICFRTLKLTTPTYGDLNHLIAAAVCGTTCCLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGYAPLTSRGSQQYRALTVPELTQQCFDAKNMMCAADPRHGRYLTCAVLFRGRMSSKEVDEQMLNVVNKSSSYFVEWIPNNVKASICDIPPKGLKMATTFVGNTTAVQETWKRVAEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEFDEDE 440

[Close]

BLAST of NO04G01220 vs. NCBI_GenBank
Match: XP_002292479.1 (tubulin beta [Thalassiosira pseudonana CCMP1335] >EED90454.1 tubulin beta [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 871.7 bits (2251), Expect = 9.800e-250
Identity = 409/440 (92.95%), Postives = 433/440 (98.41%), Query Frame = 0

Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGSYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLRMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDE 441
            MREIVH+Q GQCGNQIGAKFWEV+SDEHGVDPTG+YHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDC+QGFQLTHS+GGGTGAGMGTLLISKIREEYPDRVMSTYS+IPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHL++AA+CGTTC LRFPGQLNCDLRKLAVNMVPFPRLHFFM+G+APLTSRGSQQYRALTVPELTQQ FDAKNMMCAADPRHGRYLTCA +FRGRMS+KEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKG++M+TTF+GN+TAVQE WKRV++QFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA+EEGEFD+++
Sbjct:    1 MREIVHIQGGQCGNQIGAKFWEVMSDEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCMQGFQLTHSLGGGTGAGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFALDNEALYDICFRTLKLTTPTYGDLNHLIAAAVCGTTCCLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGYAPLTSRGSQQYRALTVPELTQQCFDAKNMMCAADPRHGRYLTCAVLFRGRMSSKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGIKMATTFVGNTTAVQETWKRVAEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEFDDED 440

[Close]

BLAST of NO04G01220 vs. NCBI_GenBank
Match: CBN79445.1 (beta tubulin [Ectocarpus siliculosus])

HSP 1 Score: 870.5 bits (2248), Expect = 2.200e-249
Identity = 414/445 (93.03%), Postives = 434/445 (97.53%), Query Frame = 0

Query:    2 REIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGSYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLRMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEAEEVM 447
            REIVHVQAGQCGNQIG+KFWEVISDEHG+DPTG YHGDSDLQLERIN YFNEA+GGRYVPRAILMDLEPGTMDSVR+GPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTGAGMGTLLISK+REEYPDR+MSTYS+IPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSR SQQYRAL+VPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQML VVNKNSSYFVEWIPNNVKASICD+PPKGL+MSTTF+GN+TA+QEVWKRV++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT E+EGE+DEDEE ++ M
Sbjct:    3 REIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGVYHGDSDLQLERINCYFNEASGGRYVPRAILMDLEPGTMDSVRSGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDSLQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRIMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRNSQQYRALSVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLAVVNKNSSYFVEWIPNNVKASICDVPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATIEDEGEYDEDEELDDQM 447

The following BLAST results are available for this feature:

BLAST of NO04G01220 vs. NCBI_GenBank

BLAST of NO04G01220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_005852742.1	1.000e-262	98.88	tubulin beta [Nannochloropsis gaditana CCMP526] >E...	[more]
XP_009035452.1	2.400e-256	94.39	tubulin beta chain [Aureococcus anophagefferens] >...	[more]
P30156.1	4.600e-255	95.29	RecName: Full=Tubulin beta-5 chain; AltName: Full=...	[more]
CBJ26065.1	1.300e-254	95.07	beta tubulin [Ectocarpus siliculosus]	[more]
CBN79446.1	3.000e-254	94.84	beta tubulin [Ectocarpus siliculosus]	[more]
P30157.1	1.100e-253	94.84	RecName: Full=Tubulin beta-6 chain; AltName: Full=...	[more]
CBJ26064.1	7.300e-253	95.25	beta tubulin [Ectocarpus siliculosus]	[more]
Q9LKI8.1	6.800e-251	93.86	RecName: Full=Tubulin beta chain; AltName: Full=Be...	[more]
XP_002292479.1	9.800e-250	92.95	tubulin beta [Thalassiosira pseudonana CCMP1335] >...	[more]
CBN79445.1	2.200e-249	93.03	beta tubulin [Ectocarpus siliculosus]	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL079	nonsL079	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR059	ncniR059	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR109	ngnoR109	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK009696	NSK009696	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO04G01220.1	NO04G01220.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|622590	gene_1905	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100009g3	gene2059	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO04G01220.1	NO04G01220.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO04G01220 ID=NO04G01220|Name=NO04G01220|organism=Nannochloropsis oceanica|type=gene|length=4913bp
ATCACAGTTTTCCTTCCTTCACTCATTAAGTTCCACCACACACACCCCTC
TTCTCCATTCGCGTGAGCTCAAGTTGCGGAGCGCATCTTTTCCCAGTCTG
GTCTGACCTTTGGGATGCTCAAACAGCGTACTCATGGTCATCAAGGCCTA
GCACGTGGACGGGCGAAAGGAGATGGAATTATAGGAAGATAAGGAGGATA
CGTCACGGGAAGAATACCTGGACAGTAAAATCTTCCACTCCGCTGCCTTC
ATGTCATGTGTGATGATACCGGGCGGGGGGAGAATGTCTTGTCGTTGGAA
GGCCTTGCTACGCAGGGTCAGTCCTGCCAATCCTGCTGATCTTTCCAATT
ACAACACCCCCGGGTCGATACCTGCAATATTAAGGTTGCGGTGAGGGTTT
GTCAACCCTGGGCGTGGATTGAGGGTTGTGAAAAATAATGATGTCGCGTT
ACCCCCCATGCCTTCACCTCTCCAATTTCCTTCTCTGACGTATTTCACAT
TCGATCGATCAAAGCGAAAGCTAGACTTTCATTTTTGTGCCTTTGTACCT
GGTGCTCTTGTCTGCAGCACTTACAAGACTCTTTACGAAGGTCTTTCCCC
CTGTGTCTGTCCTGGGAGCGTTGGTTGGTGGCTCGCCGAAATGGAAGCTC
GCCGTCGGACCCTCGCCCAATAAGGTGGCGGGCAACACCGAACCAGCAAC
GAATGCGACCCGATCGAAAAGTACCTGTCTTTGTTAAAAAGTGCTCACAC
GTAAACCCCTCGTTTTCACTCAACTACCATCCACCTTTAATATTTCCTTT
TTTTTTTCTCGATCCCAAACTTTTGCCGGCCAGTCTGTCCCTGTCTCGAT
GCAAGCGATCGTGACCAAGACTCTACATCTGCCTTCCAGAGCGCGAGCGG
CCAAAATATGTCGGTTCCCTTATGCACTTTTTGGGGCTCCTTTTTTGCGT
GTCTCACAAGCCCCAAGGCCCTTTTTCTTCTCACCCACACTATCAGTACA
TTCATCATATCGTGCCACAGCAGATTGGGCCCGCGTATCGGCAGATCGAG
CATCTATACAGCAGCCGCATCCAGAAAGCCAACTTTTGGCTTCTTTGCTT
TTGCCGCTTTTCAGCCCTTGCCCTGCAGGCTGTCAGGATCATGGCGCATG
GCTGGTACTCCTTTTATACGCCTTGACACACAAAGCACCTAGTATGTTGT
GCGGGACCGGCGTATGCGTGGGCAGAGAGGCGCGGTCATGGCGTTTGTGT
GAGCGAGCCGCGCCCTCCAGCTTTGTGAATTTTTCGTGAAGGCGAAAACG
TGCCTATCACACTATCCCACACGCCTACAAACAAGCCACATAGCAACAAC
GCGAGTACACTTATGTTTCCTACGTTCGTGCCCGCACGAAGGGGCGTCTG
TGAAGGCGCAGGGCTACTCTGGGCCCTCCAAATGATGTGCACGCTTCCCG
TCTCACTTTACACACTTCCTCTTCACTCCTTCCGTTCACATCAACACACG
CACAACTTAAGCACACATCAGTCAGCACCCCTTCAACACACTCCTCCCTC
CAACTAGTCTCAACCATGCGTGAGATCGTACACGTCCAAGCTGGGCAATG
CGGAAACCAAATCGGCGCCAAATTCTGGGAGGTCATCTCCGATGAGCATG
GAGTAGATCCCACAGGgtacagtatagctggggaagagggagtgagaaca
gggatggaaaggagctgggaaagagagaagaaagcaaatgtgtttatttc
tgtacgtaatataaggtggccatgcttgacctgtaatcgcgccacctttg
ttatatgtgcactccctccctccctccctccctccccatccccagCTCCT
ACCACGGCGACTCTGACCTACAACTGGAGAGAATTAATGTCTACTTCAAT
GAGGCAACCGGTGGGCGGTACGTGCCTCGCGCCATCCTGATGGATCTGGA
GCCTGGCACCATGGACAGTGTCCGTGCCGGTCCCTTCGGCCAGCTCTTTC
GTCCGGgtacgtgaaggagagagggagggaaggagggaaggggggtagga
taaacggttggtgcagcataaatttctaaaaaggtgcgttccatgcatga
agcccgactttgacctccgtaactctcctccttccttccctccctccccc
cctcccaagACAATTTCGTCTTCGGGCAAACAGGCGCAGGAAACAACTGG
GCCAAAGGCCACTACACCGAGGGCGCGGAACTGATCGACTCCGTTCTGGA
TGTAGTGCGGAAGGAGGCCGAGTCCTGCGATTGCCTGCAGGGGTTTCAAC
TCACCCACTCCATGGGAGGAGGAACAGGGGCAGGGATGGGCACTCTGCTT
ATTTCCAAAATCCGCGAAGAGTACCCCGATCGGGTTATGTCCACGTATTC
CATTATTCCCTCACCTAAGgtagcgatggggagagggagagagggagcga
agagcgcggacgtgtcttgtgtgctgccctcagtcgtctcaatgttttcc
tttttccccgaccgccctcttcctttccttccctccctctttccctccct
ccagGTCTCTGACACAGTTGTAGAGCCTTACAACGCCACCTTATCGGTCC
ACCAGCTCGTGGAAAACGCCGACCAGTGCTTCGTACTCGACAACGAGgta
cctccctccttccctcccccctccttccttccctccctccctccctcctt
ccctccctccctccaagtcgtcatccattcacccccctgccgcccccacc
cccaagGCCCTCTACGACATCTGCTTCCGCACCCTCAAGCTGACCACCCC
CACCTATGGCGACCTCAACCACCTCGTCTCTGCCGCTATCTGCGGCACCA
CTTGCTCCCTCCGTTTTCCGGGTCAGCTGAACTGCGACCTGCGCAAGgtg
cgtccgccttctttccatccctccttcccgccctccctcgctccctactt
ccgtcctgacctcccccctcttccttcctccttctccccccccctcgttc
ccacctctcaacccctcctccacagCTGGCCGTTAACATGGTGCCCTTTC
CCCGTCTCCATTTCTTCATGATCGGCTTCGCGCCCTTGgtatgtgccttc
cttccctccctccctccttccctcccatttcccccccttgctcttatttt
attctccttccctccttcccctcatcttccctccctccgtcctccagACA
TCCCGCGGCTCCCAGCAATACCGTGCTCTGACCGTGCCGGAGTTGACCCA
GCAGCAATTCGATGCCAAGAACATGATGTGCGCCGCCGACCCTCGCCATG
GCCGgtaagccccctttaactccctttctccctctctcccttcctcctcc
tccttccccttttagatccaacgctgtgtgcttaccacaatccgctctct
cttacatttccttcccccctccctccctccctccctccctccttccttcc
ttccctagGTACCTGACCTGCGCCTGCATGTTCCGCGGGCGCATGTCCAC
CAAGGAGGTCGACGAACAGATGCTCAATGTGGTGAACAAAAACTCCTCCT
ACTTCGTGGAGTGGATCCCCAACAACGTCAAAGCTTCCATCTGTGACATC
CCTCCCAAGGGGCTCCGGgtaagattgattgattgactcgtttattattt
ttctggtgtcaccacgaacatgtcctctcacgtccctccctccctccctc
cctcccttctcttcctccctcaatcccttcctccttcagATGTCCACCAC
CTTCATTGGAAATTCGACGGCGGTGCAGGAGGTCTGGAAGCGTGTTTCGG
ATCAATTTACGGCCATGTTCCGACGCAAGGCCTTTCTTCACTGgtaagta
gttgcaccggagggagggagggaggcggattgtgtttctgtttcttcttt
ttgggggataaaggaattcatgcttacctgtcattctccatcttccctct
ctctcagGTACACGGGCGAGGGCATGGACGAGATGGAGTTTACGGAGGCC
GAGAGCAACATGAACGACCTCGTTTCCGAGTACCAGCAATACCAGgtgcg
ggcattgtcctccctccctcttttttcccctccctccttccctccctcct
tttctactctccttttcttcccactgattcagtcgttcgattctcgtgtc
cgttgatctatgttttccctccattatttgcccacccccagGACGCAACG
GCCGAAGAGGAGGGCGAGTTCGACGAGGACGAGGAGGCGGAGGAGGTCAT
GGCGTAGGCTTCTCCTCCCTCTCCAATCTTTTCCTCCACCATCACAACTC
CAACAATCACCCCAGCAGGACCAAGCAGACGAAAGAGAGAGAGACGTGCG
AGAAAGGGAGAGCGAACATTTTCCCGTCGAAATTATTCGTTATCTTTCCG
CATTTTTCATGTATATGTGTATGGAGACGCAGAGTCCCCAGTATCATCAT
AAAAAGCAGCACCATCAACAACAAACACAACACGGCCTAAAAAACGACCT
CATATATGACAAAACTTAAAGAGAGAGAGAGATGGGGCGAGGCAGAAAAG
GGAGAAAGGCGGTAGGCGAGAGAGAGACAAAGAGATATTTGGAGTTTAGT
GACATGTTATGCAATATATCACAAGCTAGGGCTCAAACGCCCTTGACTTT
TTTCGTTTCGGTCTACCACACGAGTATGCGCCTGTCTATCCTAAATTTTG
TGTGGTCAAAAACGGCAGAGATGGACAATGATACAAATAGACGCACAGGA
GGGAAATGGGAGATATGAGCAAAGCATATAAGCCCCCAAGCACCCCGCTT
TTCAATGGATATTTGTAATTAAGATCCGACACCCCATTCAGCACCCTAAC
ACAAATCACATCATCAAACCGCAACATAAACAAAAAAGAACGAAAGCACA
CGTATACCTTTTT

protein sequence of NO04G01220.1

>NO04G01220.1-protein ID=NO04G01220.1-protein|Name=NO04G01220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=448bp
MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGSYHGDSDLQLERINVY
FNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNN
WAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTL
LISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCF
VLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDL
RKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMM
CAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVK
ASICDIPPKGLRMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTG
EGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEAEEVMA*

Synonyms

Publications