NO04G01220.1, NO04G01220.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G01220.1
Unique Name	NO04G01220.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3565
Alignment location	chr4:380926..385838 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:380926..385838 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO04G01220.1 vs.
Match: XP_005852742.1 (tubulin beta [Nannochloropsis gaditana CCMP526]; EKU23091.1 tubulin beta [Nannochloropsis gaditana CCMP526]; EWM28533.1 beta-tubulin [Nannochloropsis gaditana])

HSP 1 Score: 914.8 bits (2363), Expect = 1.000e-262
Identity = 442/447 (98.88%), Postives = 446/447 (99.78%), Query Frame = 0

Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGSYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLRMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEAEEVMA 448
            MREIVHVQAGQCGNQIGAKFWEVI+DEHGVDPTG+YHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGL+MSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEE EE+MA
Sbjct:    1 MREIVHVQAGQCGNQIGAKFWEVIADEHGVDPTGAYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCFVLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEVEEMMA 447

The following BLAST results are available for this feature:

BLAST of NO04G01220.1 vs.

BLAST of NO04G01220.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005852742.1	1.000e-262	98.88	tubulin beta [Nannochloropsis gaditana CCMP526]; E...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G01220	NO04G01220	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G01220.1	NO04G01220.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G01220.1.cds1	NO04G01220.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01220.1.cds2	NO04G01220.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01220.1.cds3	NO04G01220.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01220.1.cds4	NO04G01220.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01220.1.cds5	NO04G01220.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01220.1.cds6	NO04G01220.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01220.1.cds7	NO04G01220.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01220.1.cds8	NO04G01220.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01220.1.cds9	NO04G01220.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01220.1.cds10	NO04G01220.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01220.1.cds11	NO04G01220.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:380926..385838+
coding sequence from alignment at chr4:380926..385838+

mRNA sequence

>NO04G01220.1 ID=NO04G01220.1|Name=NO04G01220.1|organism=Nannochloropsis oceanica|type=mRNA|length=3565bp
ATCACAGTTTTCCTTCCTTCACTCATTAAGTTCCACCACACACACCCCTC
TTCTCCATTCGCGTGAGCTCAAGTTGCGGAGCGCATCTTTTCCCAGTCTG
GTCTGACCTTTGGGATGCTCAAACAGCGTACTCATGGTCATCAAGGCCTA
GCACGTGGACGGGCGAAAGGAGATGGAATTATAGGAAGATAAGGAGGATA
CGTCACGGGAAGAATACCTGGACAGTAAAATCTTCCACTCCGCTGCCTTC
ATGTCATGTGTGATGATACCGGGCGGGGGGAGAATGTCTTGTCGTTGGAA
GGCCTTGCTACGCAGGGTCAGTCCTGCCAATCCTGCTGATCTTTCCAATT
ACAACACCCCCGGGTCGATACCTGCAATATTAAGGTTGCGGTGAGGGTTT
GTCAACCCTGGGCGTGGATTGAGGGTTGTGAAAAATAATGATGTCGCGTT
ACCCCCCATGCCTTCACCTCTCCAATTTCCTTCTCTGACGTATTTCACAT
TCGATCGATCAAAGCGAAAGCTAGACTTTCATTTTTGTGCCTTTGTACCT
GGTGCTCTTGTCTGCAGCACTTACAAGACTCTTTACGAAGGTCTTTCCCC
CTGTGTCTGTCCTGGGAGCGTTGGTTGGTGGCTCGCCGAAATGGAAGCTC
GCCGTCGGACCCTCGCCCAATAAGGTGGCGGGCAACACCGAACCAGCAAC
GAATGCGACCCGATCGAAAAGTACCTGTCTTTGTTAAAAAGTGCTCACAC
GTAAACCCCTCGTTTTCACTCAACTACCATCCACCTTTAATATTTCCTTT
TTTTTTTCTCGATCCCAAACTTTTGCCGGCCAGTCTGTCCCTGTCTCGAT
GCAAGCGATCGTGACCAAGACTCTACATCTGCCTTCCAGAGCGCGAGCGG
CCAAAATATGTCGGTTCCCTTATGCACTTTTTGGGGCTCCTTTTTTGCGT
GTCTCACAAGCCCCAAGGCCCTTTTTCTTCTCACCCACACTATCAGTACA
TTCATCATATCGTGCCACAGCAGATTGGGCCCGCGTATCGGCAGATCGAG
CATCTATACAGCAGCCGCATCCAGAAAGCCAACTTTTGGCTTCTTTGCTT
TTGCCGCTTTTCAGCCCTTGCCCTGCAGGCTGTCAGGATCATGGCGCATG
GCTGGTACTCCTTTTATACGCCTTGACACACAAAGCACCTAGTATGTTGT
GCGGGACCGGCGTATGCGTGGGCAGAGAGGCGCGGTCATGGCGTTTGTGT
GAGCGAGCCGCGCCCTCCAGCTTTGTGAATTTTTCGTGAAGGCGAAAACG
TGCCTATCACACTATCCCACACGCCTACAAACAAGCCACATAGCAACAAC
GCGAGTACACTTATGTTTCCTACGTTCGTGCCCGCACGAAGGGGCGTCTG
TGAAGGCGCAGGGCTACTCTGGGCCCTCCAAATGATGTGCACGCTTCCCG
TCTCACTTTACACACTTCCTCTTCACTCCTTCCGTTCACATCAACACACG
CACAACTTAAGCACACATCAGTCAGCACCCCTTCAACACACTCCTCCCTC
CAACTAGTCTCAACCATGCGTGAGATCGTACACGTCCAAGCTGGGCAATG
CGGAAACCAAATCGGCGCCAAATTCTGGGAGGTCATCTCCGATGAGCATG
GAGTAGATCCCACAGGCTCCTACCACGGCGACTCTGACCTACAACTGGAG
AGAATTAATGTCTACTTCAATGAGGCAACCGGTGGGCGGTACGTGCCTCG
CGCCATCCTGATGGATCTGGAGCCTGGCACCATGGACAGTGTCCGTGCCG
GTCCCTTCGGCCAGCTCTTTCGTCCGGACAATTTCGTCTTCGGGCAAACA
GGCGCAGGAAACAACTGGGCCAAAGGCCACTACACCGAGGGCGCGGAACT
GATCGACTCCGTTCTGGATGTAGTGCGGAAGGAGGCCGAGTCCTGCGATT
GCCTGCAGGGGTTTCAACTCACCCACTCCATGGGAGGAGGAACAGGGGCA
GGGATGGGCACTCTGCTTATTTCCAAAATCCGCGAAGAGTACCCCGATCG
GGTTATGTCCACGTATTCCATTATTCCCTCACCTAAGGTCTCTGACACAG
TTGTAGAGCCTTACAACGCCACCTTATCGGTCCACCAGCTCGTGGAAAAC
GCCGACCAGTGCTTCGTACTCGACAACGAGGCCCTCTACGACATCTGCTT
CCGCACCCTCAAGCTGACCACCCCCACCTATGGCGACCTCAACCACCTCG
TCTCTGCCGCTATCTGCGGCACCACTTGCTCCCTCCGTTTTCCGGGTCAG
CTGAACTGCGACCTGCGCAAGCTGGCCGTTAACATGGTGCCCTTTCCCCG
TCTCCATTTCTTCATGATCGGCTTCGCGCCCTTGACATCCCGCGGCTCCC
AGCAATACCGTGCTCTGACCGTGCCGGAGTTGACCCAGCAGCAATTCGAT
GCCAAGAACATGATGTGCGCCGCCGACCCTCGCCATGGCCGGTACCTGAC
CTGCGCCTGCATGTTCCGCGGGCGCATGTCCACCAAGGAGGTCGACGAAC
AGATGCTCAATGTGGTGAACAAAAACTCCTCCTACTTCGTGGAGTGGATC
CCCAACAACGTCAAAGCTTCCATCTGTGACATCCCTCCCAAGGGGCTCCG
GATGTCCACCACCTTCATTGGAAATTCGACGGCGGTGCAGGAGGTCTGGA
AGCGTGTTTCGGATCAATTTACGGCCATGTTCCGACGCAAGGCCTTTCTT
CACTGGTACACGGGCGAGGGCATGGACGAGATGGAGTTTACGGAGGCCGA
GAGCAACATGAACGACCTCGTTTCCGAGTACCAGCAATACCAGGACGCAA
CGGCCGAAGAGGAGGGCGAGTTCGACGAGGACGAGGAGGCGGAGGAGGTC
ATGGCGTAGGCTTCTCCTCCCTCTCCAATCTTTTCCTCCACCATCACAAC
TCCAACAATCACCCCAGCAGGACCAAGCAGACGAAAGAGAGAGAGACGTG
CGAGAAAGGGAGAGCGAACATTTTCCCGTCGAAATTATTCGTTATCTTTC
CGCATTTTTCATGTATATGTGTATGGAGACGCAGAGTCCCCAGTATCATC
ATAAAAAGCAGCACCATCAACAACAAACACAACACGGCCTAAAAAACGAC
CTCATATATGACAAAACTTAAAGAGAGAGAGAGATGGGGCGAGGCAGAAA
AGGGAGAAAGGCGGTAGGCGAGAGAGAGACAAAGAGATATTTGGAGTTTA
GTGACATGTTATGCAATATATCACAAGCTAGGGCTCAAACGCCCTTGACT
TTTTTCGTTTCGGTCTACCACACGAGTATGCGCCTGTCTATCCTAAATTT
TGTGTGGTCAAAAACGGCAGAGATGGACAATGATACAAATAGACGCACAG
GAGGGAAATGGGAGATATGAGCAAAGCATATAAGCCCCCAAGCACCCCGC
TTTTCAATGGATATTTGTAATTAAGATCCGACACCCCATTCAGCACCCTA
ACACAAATCACATCATCAAACCGCAACATAAACAAAAAAGAACGAAAGCA
CACGTATACCTTTTT

protein sequence of NO04G01220.1

>NO04G01220.1-protein ID=NO04G01220.1-protein|Name=NO04G01220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=448bp
MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGSYHGDSDLQLERINVY
FNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNN
WAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTL
LISKIREEYPDRVMSTYSIIPSPKVSDTVVEPYNATLSVHQLVENADQCF
VLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDL
RKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMM
CAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVK
ASICDIPPKGLRMSTTFIGNSTAVQEVWKRVSDQFTAMFRRKAFLHWYTG
EGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEAEEVMA*

mRNA from alignment at chr4:380926..385838+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G01220.1 ID=NO04G01220.1|Name=NO04G01220.1|organism=Nannochloropsis oceanica|type=mRNA|length=4913bp|location=Sequence derived from alignment at chr4:380926..385838+ (Nannochloropsis oceanica)
ATCACAGTTTTCCTTCCTTCACTCATTAAGTTCCACCACACACACCCCTC
TTCTCCATTCGCGTGAGCTCAAGTTGCGGAGCGCATCTTTTCCCAGTCTG
GTCTGACCTTTGGGATGCTCAAACAGCGTACTCATGGTCATCAAGGCCTA
GCACGTGGACGGGCGAAAGGAGATGGAATTATAGGAAGATAAGGAGGATA
CGTCACGGGAAGAATACCTGGACAGTAAAATCTTCCACTCCGCTGCCTTC
ATGTCATGTGTGATGATACCGGGCGGGGGGAGAATGTCTTGTCGTTGGAA
GGCCTTGCTACGCAGGGTCAGTCCTGCCAATCCTGCTGATCTTTCCAATT
ACAACACCCCCGGGTCGATACCTGCAATATTAAGGTTGCGGTGAGGGTTT
GTCAACCCTGGGCGTGGATTGAGGGTTGTGAAAAATAATGATGTCGCGTT
ACCCCCCATGCCTTCACCTCTCCAATTTCCTTCTCTGACGTATTTCACAT
TCGATCGATCAAAGCGAAAGCTAGACTTTCATTTTTGTGCCTTTGTACCT
GGTGCTCTTGTCTGCAGCACTTACAAGACTCTTTACGAAGGTCTTTCCCC
CTGTGTCTGTCCTGGGAGCGTTGGTTGGTGGCTCGCCGAAATGGAAGCTC
GCCGTCGGACCCTCGCCCAATAAGGTGGCGGGCAACACCGAACCAGCAAC
GAATGCGACCCGATCGAAAAGTACCTGTCTTTGTTAAAAAGTGCTCACAC
GTAAACCCCTCGTTTTCACTCAACTACCATCCACCTTTAATATTTCCTTT
TTTTTTTCTCGATCCCAAACTTTTGCCGGCCAGTCTGTCCCTGTCTCGAT
GCAAGCGATCGTGACCAAGACTCTACATCTGCCTTCCAGAGCGCGAGCGG
CCAAAATATGTCGGTTCCCTTATGCACTTTTTGGGGCTCCTTTTTTGCGT
GTCTCACAAGCCCCAAGGCCCTTTTTCTTCTCACCCACACTATCAGTACA
TTCATCATATCGTGCCACAGCAGATTGGGCCCGCGTATCGGCAGATCGAG
CATCTATACAGCAGCCGCATCCAGAAAGCCAACTTTTGGCTTCTTTGCTT
TTGCCGCTTTTCAGCCCTTGCCCTGCAGGCTGTCAGGATCATGGCGCATG
GCTGGTACTCCTTTTATACGCCTTGACACACAAAGCACCTAGTATGTTGT
GCGGGACCGGCGTATGCGTGGGCAGAGAGGCGCGGTCATGGCGTTTGTGT
GAGCGAGCCGCGCCCTCCAGCTTTGTGAATTTTTCGTGAAGGCGAAAACG
TGCCTATCACACTATCCCACACGCCTACAAACAAGCCACATAGCAACAAC
GCGAGTACACTTATGTTTCCTACGTTCGTGCCCGCACGAAGGGGCGTCTG
TGAAGGCGCAGGGCTACTCTGGGCCCTCCAAATGATGTGCACGCTTCCCG
TCTCACTTTACACACTTCCTCTTCACTCCTTCCGTTCACATCAACACACG
CACAACTTAAGCACACATCAGTCAGCACCCCTTCAACACACTCCTCCCTC
CAACTAGTCTCAACCATGCGTGAGATCGTACACGTCCAAGCTGGGCAATG
CGGAAACCAAATCGGCGCCAAATTCTGGGAGGTCATCTCCGATGAGCATG
GAGTAGATCCCACAGGGTACAGTATAGCTGGGGAAGAGGGAGTGAGAACA
GGGATGGAAAGGAGCTGGGAAAGAGAGAAGAAAGCAAATGTGTTTATTTC
TGTACGTAATATAAGGTGGCCATGCTTGACCTGTAATCGCGCCACCTTTG
TTATATGTGCACTCCCTCCCTCCCTCCCTCCCTCCCCATCCCCAGCTCCT
ACCACGGCGACTCTGACCTACAACTGGAGAGAATTAATGTCTACTTCAAT
GAGGCAACCGGTGGGCGGTACGTGCCTCGCGCCATCCTGATGGATCTGGA
GCCTGGCACCATGGACAGTGTCCGTGCCGGTCCCTTCGGCCAGCTCTTTC
GTCCGGGTACGTGAAGGAGAGAGGGAGGGAAGGAGGGAAGGGGGGTAGGA
TAAACGGTTGGTGCAGCATAAATTTCTAAAAAGGTGCGTTCCATGCATGA
AGCCCGACTTTGACCTCCGTAACTCTCCTCCTTCCTTCCCTCCCTCCCCC
CCTCCCAAGACAATTTCGTCTTCGGGCAAACAGGCGCAGGAAACAACTGG
GCCAAAGGCCACTACACCGAGGGCGCGGAACTGATCGACTCCGTTCTGGA
TGTAGTGCGGAAGGAGGCCGAGTCCTGCGATTGCCTGCAGGGGTTTCAAC
TCACCCACTCCATGGGAGGAGGAACAGGGGCAGGGATGGGCACTCTGCTT
ATTTCCAAAATCCGCGAAGAGTACCCCGATCGGGTTATGTCCACGTATTC
CATTATTCCCTCACCTAAGGTAGCGATGGGGAGAGGGAGAGAGGGAGCGA
AGAGCGCGGACGTGTCTTGTGTGCTGCCCTCAGTCGTCTCAATGTTTTCC
TTTTTCCCCGACCGCCCTCTTCCTTTCCTTCCCTCCCTCTTTCCCTCCCT
CCAGGTCTCTGACACAGTTGTAGAGCCTTACAACGCCACCTTATCGGTCC
ACCAGCTCGTGGAAAACGCCGACCAGTGCTTCGTACTCGACAACGAGGTA
CCTCCCTCCTTCCCTCCCCCCTCCTTCCTTCCCTCCCTCCCTCCCTCCTT
CCCTCCCTCCCTCCAAGTCGTCATCCATTCACCCCCCTGCCGCCCCCACC
CCCAAGGCCCTCTACGACATCTGCTTCCGCACCCTCAAGCTGACCACCCC
CACCTATGGCGACCTCAACCACCTCGTCTCTGCCGCTATCTGCGGCACCA
CTTGCTCCCTCCGTTTTCCGGGTCAGCTGAACTGCGACCTGCGCAAGGTG
CGTCCGCCTTCTTTCCATCCCTCCTTCCCGCCCTCCCTCGCTCCCTACTT
CCGTCCTGACCTCCCCCCTCTTCCTTCCTCCTTCTCCCCCCCCCTCGTTC
CCACCTCTCAACCCCTCCTCCACAGCTGGCCGTTAACATGGTGCCCTTTC
CCCGTCTCCATTTCTTCATGATCGGCTTCGCGCCCTTGGTATGTGCCTTC
CTTCCCTCCCTCCCTCCTTCCCTCCCATTTCCCCCCCTTGCTCTTATTTT
ATTCTCCTTCCCTCCTTCCCCTCATCTTCCCTCCCTCCGTCCTCCAGACA
TCCCGCGGCTCCCAGCAATACCGTGCTCTGACCGTGCCGGAGTTGACCCA
GCAGCAATTCGATGCCAAGAACATGATGTGCGCCGCCGACCCTCGCCATG
GCCGGTAAGCCCCCTTTAACTCCCTTTCTCCCTCTCTCCCTTCCTCCTCC
TCCTTCCCCTTTTAGATCCAACGCTGTGTGCTTACCACAATCCGCTCTCT
CTTACATTTCCTTCCCCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCTTCC
TTCCCTAGGTACCTGACCTGCGCCTGCATGTTCCGCGGGCGCATGTCCAC
CAAGGAGGTCGACGAACAGATGCTCAATGTGGTGAACAAAAACTCCTCCT
ACTTCGTGGAGTGGATCCCCAACAACGTCAAAGCTTCCATCTGTGACATC
CCTCCCAAGGGGCTCCGGGTAAGATTGATTGATTGACTCGTTTATTATTT
TTCTGGTGTCACCACGAACATGTCCTCTCACGTCCCTCCCTCCCTCCCTC
CCTCCCTTCTCTTCCTCCCTCAATCCCTTCCTCCTTCAGATGTCCACCAC
CTTCATTGGAAATTCGACGGCGGTGCAGGAGGTCTGGAAGCGTGTTTCGG
ATCAATTTACGGCCATGTTCCGACGCAAGGCCTTTCTTCACTGGTAAGTA
GTTGCACCGGAGGGAGGGAGGGAGGCGGATTGTGTTTCTGTTTCTTCTTT
TTGGGGGATAAAGGAATTCATGCTTACCTGTCATTCTCCATCTTCCCTCT
CTCTCAGGTACACGGGCGAGGGCATGGACGAGATGGAGTTTACGGAGGCC
GAGAGCAACATGAACGACCTCGTTTCCGAGTACCAGCAATACCAGGTGCG
GGCATTGTCCTCCCTCCCTCTTTTTTCCCCTCCCTCCTTCCCTCCCTCCT
TTTCTACTCTCCTTTTCTTCCCACTGATTCAGTCGTTCGATTCTCGTGTC
CGTTGATCTATGTTTTCCCTCCATTATTTGCCCACCCCCAGGACGCAACG
GCCGAAGAGGAGGGCGAGTTCGACGAGGACGAGGAGGCGGAGGAGGTCAT
GGCGTAGGCTTCTCCTCCCTCTCCAATCTTTTCCTCCACCATCACAACTC
CAACAATCACCCCAGCAGGACCAAGCAGACGAAAGAGAGAGAGACGTGCG
AGAAAGGGAGAGCGAACATTTTCCCGTCGAAATTATTCGTTATCTTTCCG
CATTTTTCATGTATATGTGTATGGAGACGCAGAGTCCCCAGTATCATCAT
AAAAAGCAGCACCATCAACAACAAACACAACACGGCCTAAAAAACGACCT
CATATATGACAAAACTTAAAGAGAGAGAGAGATGGGGCGAGGCAGAAAAG
GGAGAAAGGCGGTAGGCGAGAGAGAGACAAAGAGATATTTGGAGTTTAGT
GACATGTTATGCAATATATCACAAGCTAGGGCTCAAACGCCCTTGACTTT
TTTCGTTTCGGTCTACCACACGAGTATGCGCCTGTCTATCCTAAATTTTG
TGTGGTCAAAAACGGCAGAGATGGACAATGATACAAATAGACGCACAGGA
GGGAAATGGGAGATATGAGCAAAGCATATAAGCCCCCAAGCACCCCGCTT
TTCAATGGATATTTGTAATTAAGATCCGACACCCCATTCAGCACCCTAAC
ACAAATCACATCATCAAACCGCAACATAAACAAAAAAGAACGAAAGCACA
CGTATACCTTTTT

Coding sequence (CDS) from alignment at chr4:380926..385838+

>NO04G01220.1 ID=NO04G01220.1|Name=NO04G01220.1|organism=Nannochloropsis oceanica|type=CDS|length=1344bp|location=Sequence derived from alignment at chr4:380926..385838+ (Nannochloropsis oceanica)
ATGCGTGAGATCGTACACGTCCAAGCTGGGCAATGCGGAAACCAAATCGG
CGCCAAATTCTGGGAGGTCATCTCCGATGAGCATGGAGTAGATCCCACAG
GCTCCTACCACGGCGACTCTGACCTACAACTGGAGAGAATTAATGTCTAC
TTCAATGAGGCAACCGGTGGGCGGTACGTGCCTCGCGCCATCCTGATGGA
TCTGGAGCCTGGCACCATGGACAGTGTCCGTGCCGGTCCCTTCGGCCAGC
TCTTTCGTCCGGACAATTTCGTCTTCGGGCAAACAGGCGCAGGAAACAAC
TGGGCCAAAGGCCACTACACCGAGGGCGCGGAACTGATCGACTCCGTTCT
GGATGTAGTGCGGAAGGAGGCCGAGTCCTGCGATTGCCTGCAGGGGTTTC
AACTCACCCACTCCATGGGAGGAGGAACAGGGGCAGGGATGGGCACTCTG
CTTATTTCCAAAATCCGCGAAGAGTACCCCGATCGGGTTATGTCCACGTA
TTCCATTATTCCCTCACCTAAGGTCTCTGACACAGTTGTAGAGCCTTACA
ACGCCACCTTATCGGTCCACCAGCTCGTGGAAAACGCCGACCAGTGCTTC
GTACTCGACAACGAGGCCCTCTACGACATCTGCTTCCGCACCCTCAAGCT
GACCACCCCCACCTATGGCGACCTCAACCACCTCGTCTCTGCCGCTATCT
GCGGCACCACTTGCTCCCTCCGTTTTCCGGGTCAGCTGAACTGCGACCTG
CGCAAGCTGGCCGTTAACATGGTGCCCTTTCCCCGTCTCCATTTCTTCAT
GATCGGCTTCGCGCCCTTGACATCCCGCGGCTCCCAGCAATACCGTGCTC
TGACCGTGCCGGAGTTGACCCAGCAGCAATTCGATGCCAAGAACATGATG
TGCGCCGCCGACCCTCGCCATGGCCGGTACCTGACCTGCGCCTGCATGTT
CCGCGGGCGCATGTCCACCAAGGAGGTCGACGAACAGATGCTCAATGTGG
TGAACAAAAACTCCTCCTACTTCGTGGAGTGGATCCCCAACAACGTCAAA
GCTTCCATCTGTGACATCCCTCCCAAGGGGCTCCGGATGTCCACCACCTT
CATTGGAAATTCGACGGCGGTGCAGGAGGTCTGGAAGCGTGTTTCGGATC
AATTTACGGCCATGTTCCGACGCAAGGCCTTTCTTCACTGGTACACGGGC
GAGGGCATGGACGAGATGGAGTTTACGGAGGCCGAGAGCAACATGAACGA
CCTCGTTTCCGAGTACCAGCAATACCAGGACGCAACGGCCGAAGAGGAGG
GCGAGTTCGACGAGGACGAGGAGGCGGAGGAGGTCATGGCGTAG

Synonyms

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