NO04G01050, NO04G01050 (gene) Nannochloropsis oceanica

Overview
NameNO04G01050
Unique NameNO04G01050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1392
Alignment locationchr4:336737..338128 -

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Properties
Property NameValue
DescriptionQueuine tRNA-ribosyltransferase catalytic subunit 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:336737..338128 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006400tRNA modification
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016763transferase activity, transferring pentosyl groups
GO:0016740transferase activity
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR036511TGT-like_sf
IPR002616tRNA_ribo_trans-like
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
BLAST of NO04G01050 vs. NCBI_GenBank
Match: EWM28513.1 (queuine trna-ribosyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 774.2 bits (1998), Expect = 2.200e-220
Identity = 364/402 (90.55%), Postives = 385/402 (95.77%), Query Frame = 0
Query:   62 VKFDPMTLPPSAEIFPSYERKDFFRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKSRGNKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTKEGPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            VK DPMT PP+ + FP YERKDFFRFELLH+S KEGSRARVGRLHTPHG VNTPGFVAVATNGALKAVDHDWGN+AGQELTFCNTYHLLLQPGPDVIKACGGLHKF+NRNRPIITDSGGFQVFSLAHGSVFDELNMKSR N+H+SE SSVLKI+EEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHID +ALLRCVLRSHRWEARSL EHLKDV+QQAMYAVIHGGVDP LRKASCEYLT LPFDGFAVGGALGKDR+EL+EVL+VTMPHLPV+KPNHLLGIADEPSIWAG+ALGVDTFDSCFPTRIARHGTLLT++GPVYIRKQVHKEDLRPLEEGCECFTC+RHSRAYLHHLYRA EPLSATLL+IHN+ YMNGLMARIR KI+ NEL
Sbjct:   55 VKVDPMTPPPAPDSFPVYERKDFFRFELLHRSSKEGSRARVGRLHTPHGNVNTPGFVAVATNGALKAVDHDWGNQAGQELTFCNTYHLLLQPGPDVIKACGGLHKFVNRNRPIITDSGGFQVFSLAHGSVFDELNMKSRSNRHRSETSSVLKISEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDSEALLRCVLRSHRWEARSLKEHLKDVRQQAMYAVIHGGVDPTLRKASCEYLTGLPFDGFAVGGALGKDRDELIEVLRVTMPHLPVDKPNHLLGIADEPSIWAGAALGVDTFDSCFPTRIARHGTLLTQQGPVYIRKQVHKEDLRPLEEGCECFTCKRHSRAYLHHLYRAFEPLSATLLSIHNIAYMNGLMARIRAKILRNEL 456          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: XP_005536949.1 (queuine tRNA ribosyltransferase [Cyanidioschyzon merolae strain 10D] >BAM80913.1 queuine tRNA ribosyltransferase [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 505.0 bits (1299), Expect = 2.500e-139
Identity = 246/400 (61.50%), Postives = 303/400 (75.75%), Query Frame = 0
Query:   65 DPMTLPPSAEIFPSYERKDFFRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKSRGNKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTKE-GPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            DP  LPP    FP+YE K FFRFE++H+S++  S AR+GRLHTPHG V TP FVAV TN ALK VD    +EAG EL FCNTYHLLLQPGP+++   GGLH+F+ R+RPI+TDSGGFQVFSLAHGSVFDELNMK+R    +   + +L ++E G +FRSYRDGRK+ LTPE SVQAQK  G+DIIIPLDEL PYHID DAL + VL SHRWEARSL EHL D++QQAMYAVIHGG+D  LR+ S EYLT+LPFDG A+GG+LGKDREEL+ +L      LP ++P HLLGIADE SI      G+DTFDSC+PTR  RHGTLLT++ G + I+ +  +    P++  CE F  + H+ AYLHHL+RA EPL+A LLT+HN++YM  +M  IR +I+ +EL
Sbjct:   22 DPWALPPCPSTFPAYEPKPFFRFEIIHRSRR--SSARIGRLHTPHGTVETPAFVAVGTNAALKMVDQRRADEAGLELLFCNTYHLLLQPGPEIVTQAGGLHRFMQRSRPIMTDSGGFQVFSLAHGSVFDELNMKTR---KRGSPNLLLAVSENGPVFRSYRDGRKIELTPEKSVQAQKMLGADIIIPLDELPPYHIDRDALYQSVLLSHRWEARSLREHLHDMRQQAMYAVIHGGIDLELRRKSVEYLTALPFDGIAIGGSLGKDREELLALLAFLDTLLPKDRPVHLLGIADEESIRRAVPYGIDTFDSCYPTRAGRHGTLLTRQHGRIQIKSRKWERVFEPVDTTCEGFVSQNHTLAYLHHLWRAHEPLAAALLTLHNIKYMCDVMREIRTRILADEL 416          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: PRW56346.1 (Queuine tRNA-ribosyltransferase [Chlorella sorokiniana])

HSP 1 Score: 497.7 bits (1280), Expect = 4.000e-137
Identity = 244/397 (61.46%), Postives = 297/397 (74.81%), Query Frame = 0
Query:   73 AEIFPSYERKDFFRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKSRG---NKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVE---KPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTKEGPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            A  FP++E +DFFRFELLH SKK G  ARVGR+HTPHGI++TPGFVAV TN ALKAVD  W +  GQ+L FCNTYHLLL PG DV+ A GGLH F+NR RP+ITDSGGFQVFSLA+G+V +E+N   RG   +KHK E + V KI EEG  FRSYRDG K+LLTPESSVQAQK  G+DIIIPLDEL PYH +   L   + RSHRW ARSL  HL D++QQAMY V+HGG+   LR+ S +YLTSLPFDGFAVGG++GK+R +L  +L+  MP L      KP H+LGIAD  SI      G DTFDSC+PTR+ RHGT+LTK+GP+ +    +K   RP  EGC C TCR HS AYLHHL +A EPL A+LL IHN+ +MNGLMA++R +I+++++
Sbjct:  296 ASEFPAWEPRDFFRFELLHTSKKSG--ARVGRIHTPHGIIDTPGFVAVGTNAALKAVDGPWADAEGQQLMFCNTYHLLLHPGADVVAAAGGLHAFMNRQRPLITDSGGFQVFSLAYGTVHEEVNSLKRGTGKSKHKLEHNLVAKIAEEGVTFRSYRDGTKMLLTPESSVQAQKQLGADIIIPLDELPPYHTEQSVLEASLQRSHRWMARSLKTHLADIRQQAMYGVVHGGLSLELRQRSIDYLTSLPFDGFAVGGSMGKNRADLFWLLEQIMPRLHERSSGKPVHILGIADPASIPQLVTYGCDTFDSCYPTRVGRHGTMLTKDGPLRVVSGQYKTAFRPPVEGCTCHTCRTHSLAYLHHLAKAREPLLASLLAIHNLHHMNGLMAQLRQQILDDQI 690          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: PSC69029.1 (Queuine tRNA-ribosyltransferase [Micractinium conductrix])

HSP 1 Score: 497.7 bits (1280), Expect = 4.000e-137
Identity = 241/395 (61.01%), Postives = 295/395 (74.68%), Query Frame = 0
Query:   76 FPSYERKDFFRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKSRG---NKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHL----PVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTKEGPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            FP Y  +DFFRF++LH SKK G  ARVGR+HTPHG+++TPGFVAVATN ALKAVD  W +  GQ+L FCNTYHL+L PG DV+ A GGLH F+NR RP+ITDSGGFQVFSLA+G+V +E+N   RG   ++HK E + V K++EEG  FRSYRDG K+LLTPESSV+AQK  G+DIIIPLDEL PYH +P  L   + +SHRW ARSL  HL DV+QQAMYAV+HGG+   LR  S +YLTSLPFDGFAVGG+LGKDR +L  +L+  MP L       KP H+LGIAD  S+    A G DTFDSC+PTR+ RHGT+LTKEGP+ +    +K   RP  EGC C TC  HS AYLHHL +A EP++ATLL IHN+ +MN  MA +R +I+N+E+
Sbjct:  297 FPQYVPRDFFRFDVLHTSKKSG--ARVGRIHTPHGVIDTPGFVAVATNAALKAVDGPWADAEGQQLMFCNTYHLILHPGADVVAAAGGLHAFMNRQRPLITDSGGFQVFSLAYGTVHEEVNSLKRGSGKSRHKQEHNLVAKVSEEGVTFRSYRDGTKMLLTPESSVEAQKQLGADIIIPLDELPPYHTEPAVLEASLAKSHRWMARSLKTHLSDVRQQAMYAVVHGGLSLELRHKSIDYLTSLPFDGFAVGGSLGKDRVDLFWLLERIMPRLHERMGAPKPVHILGIADPASVPQLVAYGCDTFDSCYPTRVGRHGTMLTKEGPLRVISGKYKTAFRPPVEGCTCHTCSTHSLAYLHHLVKAHEPVAATLLAIHNVHFMNAQMAELRQQILNDEI 689          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: OQR81107.1 (queuine tRNA ribosyltransferase [Achlya hypogyna])

HSP 1 Score: 496.5 bits (1277), Expect = 8.900e-137
Identity = 239/398 (60.05%), Postives = 293/398 (73.62%), Query Frame = 0
Query:   70 PPSAEIFPSYERKDFFRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKSRGNKH---KSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTKE-GPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            PP A  FP YE +DFFRFE+LHQS K  SRARVGR+HTPHGI++TPGFV V TN ALK V     + AG +L F N+YHLLLQPGP++I   GGLHK++NR RP+ITDSGGFQVFSLA+GSV +EL MK +G  H   +   S+V KI+E+G  F+SYRDGRKV LTPESSVQAQKAYG+DIIIP DEL PYHI P+ L   V R+HRWEARSL EHLKDV+QQAMY V+HGGVD  LR+ S EY++SLPFDG A+GG++GK REE+  +L+  +P LPV KP HLLGIADEPS+     +G+DTFDSC+PTR  RHGT+ +K  G + I +        P++E C C  CR HS AY+HHL++A EP    L T+HN+ YM  LM   R  I+ N++
Sbjct:   31 PPPASTFPPYEPRDFFRFEVLHQSTK--SRARVGRIHTPHGIIDTPGFVPVGTNAALKGVSQREADAAGVQLMFANSYHLLLQPGPEIIAGAGGLHKYMNRTRPLITDSGGFQVFSLAYGSVHEELTMKGKGRNHGKYREGPSTVAKISEDGVDFKSYRDGRKVTLTPESSVQAQKAYGADIIIPFDELPPYHITPEKLAASVKRTHRWEARSLREHLKDVRQQAMYGVLHGGVDYDLRRESIEYISSLPFDGHAIGGSIGKTREEMFALLEFMLPQLPVSKPIHLLGIADEPSLHGCVPMGIDTFDSCYPTRAGRHGTVFSKTLGRIQITRGKFATHHGPIDETCGCPACREHSIAYIHHLFKAHEPTGMMLATLHNLYYMTSLMESFRQDILANKI 426          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: OQR88522.1 (queuine tRNA ribosyltransferase [Thraustotheca clavata])

HSP 1 Score: 496.1 bits (1276), Expect = 1.200e-136
Identity = 237/399 (59.40%), Postives = 298/399 (74.69%), Query Frame = 0
Query:   71 PSAEIFPSYERKDFFRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKSRG-----NKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLL-TKEGPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            PS+  FPSY  +DFFRFE+L++S K  SRARVGR+HTPHG ++TPGFV V TN ALK V     + AG +L F N+YHLLLQPGPD I A GGLHK++ R RP+ITDSGGFQVFSLA+GSV +EL MK  G      K++   SSV KITEEG +F+SYRDGRK+ LTPESSVQ QKAYG+DIIIP DEL PYHI P+ L   V R+HRWEARSL EHLK+V+ QAMY VIHGGVD  LR+ S EY++SLPFDG A+GG++GKDR+E+ ++L+  MP LP EKP HLLGIADEPS+     +G+DTFDSC+PTR  RHGT+  T  G +++ +  H  D  P+++ C+C  C+ HS AY+HHL++A EP    L T+HN+ YM  LMA+ R  I++N++
Sbjct:    8 PSSSSFPSYSPRDFFRFEILYESTK--SRARVGRIHTPHGPIDTPGFVPVGTNAALKGVTQQQADAAGVQLMFANSYHLLLQPGPDTIAAGGGLHKYMGRTRPLITDSGGFQVFSLAYGSVHEELTMKGAGRSGNQGKYREGPSSVAKITEEGVVFKSYRDGRKITLTPESSVQIQKAYGADIIIPFDELPPYHITPEKLEASVHRTHRWEARSLKEHLKNVQNQAMYGVIHGGVDYKLRQESIEYISSLPFDGHAIGGSIGKDRQEMFDLLEFVMPKLPREKPIHLLGIADEPSLHGCVPMGIDTFDSCYPTRAGRHGTVFSTTRGRMHLIRGKHARDFGPIDDNCDCPACKHHSVAYIHHLFKAHEPNGMMLATLHNVHYMTRLMAQFRQDILDNKI 404          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: XP_008610966.1 (queuine tRNA-ribosyltransferase [Saprolegnia diclina VS20] >EQC35649.1 queuine tRNA-ribosyltransferase [Saprolegnia diclina VS20])

HSP 1 Score: 493.4 bits (1269), Expect = 7.500e-136
Identity = 238/399 (59.65%), Postives = 292/399 (73.18%), Query Frame = 0
Query:   70 PPSAEIFPSYERKDFFRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMK----SRGNKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTKE-GPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            PP A  FP Y  +DFFRFE+LH+S K  SRARVGR+HTPHG+++TPGFV V TN ALK V     + AG +L F N+YHLLLQPGPDVI   GGLH ++NR RP+ITDSGGFQVFSLA+GSV +EL MK    S G K++   S+V KI+E+G  F+SYRDGRKV LTPESSVQ QKAYG+DIIIP DEL PYHI P+AL   V R+HRWEARSL EHLK+VK QAMY VIHGGVD  LRK S EY+ SLPFDG A+GG++GK+R+E++++L    P LP EKP HLLGIADEPS+     LG+DTFDSC+PTR  RHGT+ +K  G + + K        P++E C C  C+ HS +Y+HHL++A EP    L T+HN+ YM  LM R R  I+ N++
Sbjct:   46 PPEASTFPPYVPRDFFRFEVLHESTK--SRARVGRIHTPHGVIDTPGFVPVGTNAALKGVTQREADAAGVQLMFANSYHLLLQPGPDVIGGAGGLHTYMNRTRPLITDSGGFQVFSLAYGSVHEELTMKGAGRSHGGKYREGPSTVAKISEDGVDFKSYRDGRKVTLTPESSVQIQKAYGADIIIPFDELPPYHITPEALALSVKRTHRWEARSLREHLKNVKNQAMYGVIHGGVDYDLRKQSIEYIASLPFDGHAIGGSIGKNRDEMLDLLTYVAPQLPREKPIHLLGIADEPSLHGCVPLGIDTFDSCYPTRAGRHGTVFSKTLGRIQVTKGKFASHHGPIDESCRCPACKEHSVSYIHHLFKAHEPTGMMLATLHNLYYMTSLMERFRSDILANKI 442          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: XP_003058508.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH56963.1 predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 486.1 bits (1250), Expect = 1.200e-133
Identity = 245/403 (60.79%), Postives = 294/403 (72.95%), Query Frame = 0
Query:   63 KFDPMTLPPSAEIFPSYERKDFFRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKS-RGNKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTK-EGPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            K DP+T PP A  FP Y  +DFFR+EL+HQSKK  S ARVGR+HTPHG+++TPGFVAV T GALKAV H     A  +L F NTYHL+LQPG D++   GGLH FI R+ PIITDSGGFQVFSL + S  +   MKS R +KHKSE   +L++ EEG +F+SYRDG+KV LTPES+V AQK  G+DIIIPLDEL PYHID + L R V  SHRWEARSL  HL+DV++QAMYAV+HGGVD ALRK S EYL+SLPFDGFA+GG+LGKD  E  E++   MP LP ++P H+LGI DE SI AG   G DTFDS FPTR ARHGTLLT+  G V IR++ + E   P    C C  C  H+RAYLHHL +A EP++  L T HN+ YM  LM  IR KI+N+E+
Sbjct:   45 KIDPLTPPPPASEFPPYAPRDFFRYELIHQSKK--SNARVGRIHTPHGVIDTPGFVAVGTMGALKAVPHQELQAANLQLMFSNTYHLMLQPGADLVVNAGGLHAFIGRDAPIITDSGGFQVFSLGNTSQGEGPEMKSRRPSKHKSEEGLLLRVNEEGVVFKSYRDGKKVELTPESAVLAQKKLGADIIIPLDELPPYHIDDETLRRSVYLSHRWEARSLRTHLEDVRRQAMYAVVHGGVDAALRKLSAEYLSSLPFDGFAIGGSLGKDPTEFGELMAYVMPLLPRDRPTHVLGIGDETSIRAGVPHGADTFDSTFPTRAARHGTLLTRTHGRVNIRRRENAEMFEPPCALCPCRLCTSHTRAYLHHLDKANEPMAQELATSHNLHYMGWLMGDIREKILNDEI 445          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: XP_002501403.1 (predicted protein [Micromonas commoda] >ACO62661.1 predicted protein [Micromonas commoda])

HSP 1 Score: 483.0 bits (1242), Expect = 1.000e-132
Identity = 243/403 (60.30%), Postives = 290/403 (71.96%), Query Frame = 0
Query:   63 KFDPMTLPPSAEIFPSYERKDFFRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKS-RGNKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTK-EGPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            +F P+T PP A  FP YE +DFFR+EL+HQSKK  S ARVGR+ TPHG++ TPG+VAV TNGALKAV H     AG +L F NTYHL+LQPGPD++ + GGLH+FI R+ PIITDSGGFQVFSLA  +  D L MKS R  K K     +++  E G LFRSYRDG  V+LTPESSV+AQK+ G+D+IIPLDEL PYHID   L R V  SHRWEARSL  HL+DV+QQAMYAVIHGGVD  LR+ S EYLTSLPFDGFA+GG+LGKD  ELVE+L   MP LP ++PNHLLGI D  SI      GVDTFDS FPTR ARHG L+T+  G   I++  +     P+   C C  C+ H+ +YLHHL+RA EP + TL T HN+ YM  LM   R KI+N+EL
Sbjct:   62 RFKPLTPPPPASEFPPYEPRDFFRYELIHQSKK--SAARVGRICTPHGVIETPGYVAVGTNGALKAVPHQELAAAGLDLMFANTYHLMLQPGPDLVASAGGLHEFIGRDAPIITDSGGFQVFSLARPNAEDGLEMKSRRATKQKGGDGLLIRTNEHGVLFRSYRDGSSVVLTPESSVEAQKSLGADVIIPLDELPPYHIDRAVLERSVYLSHRWEARSLKAHLRDVRQQAMYAVIHGGVDRDLRRMSVEYLTSLPFDGFAIGGSLGKDTAELVELLGHLMPQLPKDRPNHLLGIGDVGSILGSIPHGVDTFDSTFPTRNARHGQLMTRTRGTFNIQRAENASLHEPVCHQCACSLCKNHTASYLHHLFRANEPTAVTLATAHNLHYMGWLMQTQREKILNDEL 462          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: XP_012204851.1 (queuine tRNA-ribosyltransferase [Saprolegnia parasitica CBS 223.65] >KDO24421.1 queuine tRNA-ribosyltransferase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 483.0 bits (1242), Expect = 1.000e-132
Identity = 234/392 (59.69%), Postives = 288/392 (73.47%), Query Frame = 0
Query:   77 PSYERKDFFRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMK----SRGNKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTKE-GPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            PS  R  FFRFE+LH+S K  SRARVGR+HTPHG+++TPGFV V TN ALK V     + AG +L F N+YHLLLQPGPDVI   GGLHK++NR RP+ITDSGGFQVFSLA+GSV +EL MK    S G K++   S+V KI+E+G  F+SYRDGRKV LTPESSVQ QKAYG+DIIIP DEL PYHI P+AL   V R+HRWEARSL EHLK+V++QAMY VIHGGVD  LRK S EY+ SLPFDG A+GG++GK+R+E++E+L    P LP EKP HLLGIADEPS+     LG+DTFDSC+PTR  RHGT+ +K  G + + K        P++E C C  C+ HS +Y+HHL++A EP    L T+HN+ YM  LM   R  I+ N++
Sbjct:   69 PSVRRARFFRFEVLHESTK--SRARVGRIHTPHGVIDTPGFVPVGTNAALKGVTQREADAAGVQLMFANSYHLLLQPGPDVIAGAGGLHKYMNRTRPLITDSGGFQVFSLAYGSVHEELTMKGAGRSHGGKYRDGPSTVAKISEDGVDFKSYRDGRKVTLTPESSVQIQKAYGADIIIPFDELPPYHITPEALALSVKRTHRWEARSLREHLKNVQKQAMYGVIHGGVDYDLRKQSVEYIASLPFDGHAIGGSIGKNRDEMLELLTYVTPQLPREKPIHLLGIADEPSLHGCVPLGIDTFDSCYPTRAGRHGTVFSKTLGRIQVTKGKFASHHGPIDESCSCPACKEHSVSYIHHLFKAHEPTGMMLATLHNLYYMTSLMESFRADILANKI 458          
The following BLAST results are available for this feature:
BLAST of NO04G01050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28513.12.200e-22090.55queuine trna-ribosyltransferase [Nannochloropsis g... [more]
XP_005536949.12.500e-13961.50queuine tRNA ribosyltransferase [Cyanidioschyzon m... [more]
PRW56346.14.000e-13761.46Queuine tRNA-ribosyltransferase [Chlorella sorokin... [more]
PSC69029.14.000e-13761.01Queuine tRNA-ribosyltransferase [Micractinium cond... [more]
OQR81107.18.900e-13760.05queuine tRNA ribosyltransferase [Achlya hypogyna][more]
OQR88522.11.200e-13659.40queuine tRNA ribosyltransferase [Thraustotheca cla... [more]
XP_008610966.17.500e-13659.65queuine tRNA-ribosyltransferase [Saprolegnia dicli... [more]
XP_003058508.11.200e-13360.79predicted protein [Micromonas pusilla CCMP1545] >E... [more]
XP_002501403.11.000e-13260.30predicted protein [Micromonas commoda] >ACO62661.1... [more]
XP_012204851.11.000e-13259.69queuine tRNA-ribosyltransferase [Saprolegnia paras... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009713NSK009713Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G01050.1NO04G01050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578306gene_1885Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100131g5gene2072Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G01050.1NO04G01050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G01050 ID=NO04G01050|Name=NO04G01050|organism=Nannochloropsis oceanica|type=gene|length=1392bp
ATGAGGCCTGCTGCTGCATGCGCTCCTCTCCTAGCCGTACGTCGACCTAT
TGCTGCGCAAAGCAGCCTGCCTCTTGCCTCGGCCTCAGCCTGCTGCTGTA
CAACGACTAGCACCACAACCACACCCCATCCCCCTGACCAACCCCCCCTG
GCCCTTCCCAAGAAAAAGGAGAAGAAACGCAAGGTCAAATTCGACCCCAT
GACCCTGCCTCCTTCCGCTGAGATCTTTCCGTCCTACGAGCGCAAGGACT
TCTTCCGCTTTGAGCTGCTGCATCAATCCAAGAAAGAAGGGTCCCGGGCC
CGAGTAGGGAGACTCCATACCCCTCACGGCATCGTCAATACGCCTGGCTT
CGTCGCCGTCGCCACCAACGGCGCGCTCAAAGCTGTCGATCACGACTGGG
GTAATGAGGCAGGACAAGAGCTCACTTTCTGCAACACTTACCACCTCCTC
CTCCAGCCGGGGCCCGATGTAATCAAGGCCTGTGGTGGCCTCCACAAATT
TATCAACCGTAATCGTCCCATCATCACTGACAGCGGCGGCTTTCAAGTCT
TCTCCCTCGCCCATGGTTCAGTTTTTGACGAGCTTAACATGAAATCTCGG
GGCAATAAACACAAGTCTGAGGCCTCGTCCGTCCTCAAAATTACTGAGGA
GGGCTGCCTCTTCCGCTCCTACCGCGACGGCCGGAAAGTCCTCCTCACAC
CGGAATCATCCGTTCAAGCGCAAAAAGCCTACGGATCTGACATCATTATC
CCTCTCGACGAACTACACCCCTATCATATTGACCCCGATGCCTTGCTCCG
GTGCGTCTTACGCTCGCACAGGTGGGAAGCGCGTTCCCTAAACGAACACC
TGAAAGATGTGAAACAACAGGCCATGTATGCCGTCATTCATGGAGGGGTT
GACCCTGCTTTGCGAAAAGCCAGCTGTGAGTATCTCACTTCGTTGCCATT
TGATGGTTTTGCGGTGGGGGGAGCGTTGGGGAAGGACAGGGAGGAGCTGG
TTGAAGTTTTGAAGGTGACGATGCCGCACCTGCCCGTGGAGAAGCCCAAT
CATTTGCTAGGCATTGCAGATGAGCCGTCGATCTGGGCGGGGTCAGCGTT
GGGGGTGGACACATTTGATTCGTGTTTCCCCACGCGGATCGCGAGGCATG
GTACCCTGTTGACGAAGGAGGGACCTGTGTACATTCGAAAGCAGGTGCAC
AAGGAGGACTTGCGGCCGTTGGAGGAGGGATGCGAATGCTTTACCTGCCG
GAGGCACAGCCGAGCATACCTGCATCATTTGTACCGGGCATGCGAGCCGT
TGAGTGCCACATTGTTGACGATTCATAATATGCAGTACATGAATGGGCTG
ATGGCGCGAATACGGGGAAAGATAATGAACAATGAGCTATAG
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protein sequence of NO04G01050.1

>NO04G01050.1-protein ID=NO04G01050.1-protein|Name=NO04G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=464bp
MRPAAACAPLLAVRRPIAAQSSLPLASASACCCTTTSTTTTPHPPDQPPL
ALPKKKEKKRKVKFDPMTLPPSAEIFPSYERKDFFRFELLHQSKKEGSRA
RVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLL
LQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKSR
GNKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIII
PLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGV
DPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPN
HLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTKEGPVYIRKQVH
KEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGL
MARIRGKIMNNEL*
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Synonyms
Publications