NO04G00810, NO04G00810 (gene) Nannochloropsis oceanica

Overview
NameNO04G00810
Unique NameNO04G00810
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2202
Alignment locationchr4:273463..275664 +

Link to JBrowse

Properties
Property NameValue
DescriptionDNA repair protein RAD51 homolog 3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:273463..275664 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0008094DNA-dependent ATPase activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006259DNA metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR020588RecA_ATP-bd
IPR013632DNA_recomb/repair_Rad51_C
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
BLAST of NO04G00810 vs. NCBI_GenBank
Match: XP_006138730.1 (PREDICTED: DNA repair protein RAD51 homolog 3 [Pelodiscus sinensis])

HSP 1 Score: 178.7 bits (452), Expect = 3.700e-41
Identity = 107/275 (38.91%), Postives = 150/275 (54.55%), Query Frame = 0
Query:  112 IITFCRAIDTMLGGGVQRGQLMEIVGIPGSGKTQVGIQLAIDAQIPRSFRGAGGKAVFIDTEGAFMAERAAEMGQALIDHLQRILASNQCKXXXXXXXXXXXXDVAGLTLKTVLGNVWVLRCLNDAELMQTLQHLPAFLDSEPEVVLVVIDSIALPFRQDKMFQTESAVAKARVVNVMARELNALAEARNVAVVVTNQXXXXXXXXXXXXXXXXXXXXXXXAPTLGESWAPGPAVRLLL-WTNDMGLRCATLQKHPGQAHSTVAFRVTTMGIRDV 386
            IITFC A+D +LGGGVQ  ++ EI G PG GKTQ+ +QLA+D QIP  F G  G+AVFIDTEG+F+ +R A++  A + H Q I  ++Q               +   +L+++L +++  RC +  EL+  +  LP FL    +V LV++D IA PFR D     E    + R++N +A++L ++A A  +AVV+TNQ                        P LGESW     +RL+  W N    R ATL K P Q  STV F +T  G RDV
Sbjct:   91 IITFCSALDDILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGLAGEAVFIDTEGSFIVDRVADIATACVQHCQLIAETHQ--------EEDFQKSLETFSLESILSHIYYFRCHDYTELLAQVYLLPDFLSEHSKVQLVIVDGIAFPFRHD----LEDLSLRTRLLNGLAQQLISIANAHKLAVVLTNQ-----------MTTRIGQSQSMLVPALGESWGHAATIRLIFHWDNKQ--RLATLYKSPSQKESTVPFHITPNGFRDV 340          
BLAST of NO04G00810 vs. NCBI_GenBank
Match: XP_007057708.1 (PREDICTED: DNA repair protein RAD51 homolog 3 [Chelonia mydas])

HSP 1 Score: 178.7 bits (452), Expect = 3.700e-41
Identity = 112/294 (38.10%), Postives = 157/294 (53.40%), Query Frame = 0
Query:   93 SALDLLKAARQPATSTGSKIITFCRAIDTMLGGGVQRGQLMEIVGIPGSGKTQVGIQLAIDAQIPRSFRGAGGKAVFIDTEGAFMAERAAEMGQALIDHLQRILASNQCKXXXXXXXXXXXXDVAGLTLKTVLGNVWVLRCLNDAELMQTLQHLPAFLDSEPEVVLVVIDSIALPFRQDKMFQTESAVAKARVVNVMARELNALAEARNVAVVVTNQXXXXXXXXXXXXXXXXXXXXXXXAPTLGESWAPGPAVRLLL-WTNDMGLRCATLQKHPGQAHSTVAFRVTTMGIRDV 386
            SAL+LL+  +         IITFC A+D +LGGGVQ  ++ EI G PG GKTQ+ +QLA+D QIP  F G  G+AVFIDTEG+FM +R  ++  A + H Q I  ++Q               +   +L+++L +++  RC +  EL+  +  LP FL    +V LV++D IA PFR D     E    + R++N +A++L ++A A  +AVV+TNQ                        P LGESW     +RL+  W N    R ATL K P Q  STV F +T  G RDV
Sbjct:   77 SALELLEQEQSQGF-----IITFCSALDDILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGLAGEAVFIDTEGSFMVDRVVDIATACVQHCQLIAETHQ--------EEDFQKSLETFSLESILSHIYYFRCHDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHD----FEDLSLRTRLLNGLAQQLISIANAHKLAVVLTNQ-----------MTTRIGQSQSMLVPALGESWGHAATIRLIFHWENKQ--RLATLYKSPSQKESTVPFHITPHGFRDV 340          
BLAST of NO04G00810 vs. NCBI_GenBank
Match: XP_018597458.1 (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Scleropages formosus] >KPP75301.1 DNA repair protein RAD513-like [Scleropages formosus])

HSP 1 Score: 178.3 bits (451), Expect = 4.800e-41
Identity = 118/321 (36.76%), Postives = 171/321 (53.27%), Query Frame = 0
Query:   66 VDLIRTVLSEADESLNTPPSSSLPLPTSALDLLKAARQPATSTGSKIITFCRAIDTMLGGGVQRGQLMEIVGIPGSGKTQVGIQLAIDAQIPRSFRGAGGKAVFIDTEGAFMAERAAEMGQALIDHLQRILASNQCKXXXXXXXXXXXXDVAGLTLKTVLGNVWVLRCLNDAELMQTLQHLPAFLDSEPEVVLVVIDSIALPFRQDKMFQTESAVAKARVVNVMARELNALAEARNVAVVVTNQXXXXXXXXXXXXXXXXXXXXXXXAPTLGESWAPGPAVRLLL-WTNDMGLRCATLQKHPGQAHSTVAFRVTTMGIRDV 386
            VD+++ V  + D+ +   P   L    +AL+L +  +      GS I+TFC A+D++LGGG+  G+  E+ G PG GKTQ+ IQLA+D QIP  F G GG AV+IDTEG+F+ +R  +M +A + H   +    + +             + G TL+T+L N+++ RC +  EL+  +  LP FL   PEV LVVIDSIA PFR D     E    + R++N +A++L  +A   N+AVV+TNQ                        P LGESW      RL+L W      R A+L K P    +TV +++T  G RDV
Sbjct:   49 VDVLQEVRGKRDQGV--APGGGL----TALELFEKEQ----GLGS-IVTFCSALDSVLGGGLPVGKTSEVCGAPGVGKTQLCIQLAVDVQIPLCFGGLGGHAVYIDTEGSFLVQRVVDMAEAAVKHCSLLAEDTEQREA-----------LKGFTLETILSNLFLFRCHDYVELLAEIYLLPDFLAQHPEVRLVVIDSIAFPFRHD----FEDLSQRTRLLNGLAQQLIQMATQHNIAVVLTNQ-----------MTTKVGNGQSKLVPALGESWGHAATQRLILHWEGQQ--RLASLYKSPSHPEATVPYQITGEGFRDV 330          
BLAST of NO04G00810 vs. NCBI_GenBank
Match: XP_415870.4 (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Gallus gallus])

HSP 1 Score: 178.3 bits (451), Expect = 4.800e-41
Identity = 131/371 (35.31%), Postives = 183/371 (49.33%), Query Frame = 0
Query:   17 PATQGALRRKGFRKAGELREALQKGKGEDHPILTASDLATRAFTPTTSDVDLIRTVLSE-ADESLNTPPSSSLPLPTSALDLLKAARQPATSTGSKIITFCRAIDTMLGGGVQRGQLMEIVGIPGSGKTQVGIQLAIDAQIPRSFRGAGGKAVFIDTEGAFMAERAAEMGQALIDHLQRILASNQCKXXXXXXXXXXXXDVAGLTLKTVLGNVWVLRCLNDAELMQTLQHLPAFLDSEPEVVLVVIDSIALPFRQDKMFQTESAVAKARVVNVMARELNALAEARNVAVVVTNQXXXXXXXXXXXXXXXXXXXXXXXAPTLGESWAPGPAVRLLL-WTNDMGLRCATLQKHPGQAHSTVAFRVTTMGIRDV 386
            PA +  L   GF+ A EL E    G  ++  I     L            + ++ V  E A ++  T   S      +AL+LL+  +     T   IITFC A+D +LGGGVQ  ++ EI G PG GKTQ+ +QLA+D QIP  F G  G+AVFIDTEG+FM +RAA++  A + H Q I  ++Q               +   +L+++L +++  RC +  EL+  +  LP FL    +V LVVID IA PFR D     E    + R++N +A++L  +A     AVV+TNQ                        P LGESW     VRL+  W N    R ATL K P Q  ST+ + +T  G RDV
Sbjct:   12 PALRARLLAAGFQTAQELLETGPCGLSKEIGISREEAL------------EALQVVRQECAGDAAKTAGGSGSTRKCTALELLEEEQ-----TQGFIITFCSALDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRAADIATACVRHCQLIAEAHQ--------EEDHLQALETFSLESILSHIYYFRCRDYIELLAQVYLLPDFLSEHSKVRLVVIDGIAFPFRHD----FEDLSLRTRLLNGLAQQLIIIANDHKSAVVLTNQ-----------MTTRFGQNQSMLVPALGESWGHAATVRLIFHWDNTQ--RLATLYKSPSQKESTIPYNITPQGFRDV 340          
BLAST of NO04G00810 vs. NCBI_GenBank
Match: XP_010137856.1 (PREDICTED: DNA repair protein RAD51 homolog 3, partial [Buceros rhinoceros silvestris])

HSP 1 Score: 177.9 bits (450), Expect = 6.300e-41
Identity = 116/309 (37.54%), Postives = 162/309 (52.43%), Query Frame = 0
Query:   78 ESLNTPPSSSLPLPTSALDLLKAARQPATSTGSKIITFCRAIDTMLGGGVQRGQLMEIVGIPGSGKTQVGIQLAIDAQIPRSFRGAGGKAVFIDTEGAFMAERAAEMGQALIDHLQRILASNQCKXXXXXXXXXXXXDVAGLTLKTVLGNVWVLRCLNDAELMQTLQHLPAFLDSEPEVVLVVIDSIALPFRQDKMFQTESAVAKARVVNVMARELNALAEARNVAVVVTNQXXXXXXXXXXXXXXXXXXXXXXXAPTLGESWAPGPAVRLLL-WTNDMGLRCATLQKHPGQAHSTVAFRVTTMGIRDV 386
            ++  T   S      +AL+LL   +    S GS IITFC A+D++LGGGVQ  ++ EI G PG GKTQ+ +QLA+D QIP  F G  G+AVFIDTEG+FM +R  +M  A + H Q I  ++Q               +   +L+++L +++  RC +  EL+  +  LP FL    +V LVV+D IA PFR D     E    + R++N +A++L  +A     AVV+TNQ                        P LGESW     VRL+  W N    R ATL K P Q  ST+ + +T+ G RDV
Sbjct:   49 DAARTAGGSGTTRQCTALELLAEEQ----SQGS-IITFCSALDSILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDMASACVQHCQLIAEAHQ--------EEDHIKALESFSLESILSHIYYFRCRDYIELLAQVYLLPDFLSEHSKVRLVVVDGIAFPFRHD----FEDLSLRTRLLNGLAQQLMIIANDHKAAVVLTNQ-----------MTTRIGQSQSTLVPALGESWGHAATVRLIFHWDNSQ--RLATLYKSPSQKESTIPYHITSHGFRDV 327          
BLAST of NO04G00810 vs. NCBI_GenBank
Match: XP_005298812.1 (DNA repair protein RAD51 homolog 3 isoform X1 [Chrysemys picta bellii] >XP_023955443.1 DNA repair protein RAD51 homolog 3 isoform X1 [Chrysemys picta bellii] >XP_023955444.1 DNA repair protein RAD51 homolog 3 isoform X1 [Chrysemys picta bellii])

HSP 1 Score: 177.6 bits (449), Expect = 8.200e-41
Identity = 106/275 (38.55%), Postives = 149/275 (54.18%), Query Frame = 0
Query:  112 IITFCRAIDTMLGGGVQRGQLMEIVGIPGSGKTQVGIQLAIDAQIPRSFRGAGGKAVFIDTEGAFMAERAAEMGQALIDHLQRILASNQCKXXXXXXXXXXXXDVAGLTLKTVLGNVWVLRCLNDAELMQTLQHLPAFLDSEPEVVLVVIDSIALPFRQDKMFQTESAVAKARVVNVMARELNALAEARNVAVVVTNQXXXXXXXXXXXXXXXXXXXXXXXAPTLGESWAPGPAVRLLL-WTNDMGLRCATLQKHPGQAHSTVAFRVTTMGIRDV 386
            IITFC A+D +LGGGVQ  ++ EI G PG GKTQ+ +QLA+D QIP  F G  G+AVFIDTEG+FM +R  ++  A + H Q I  ++Q               +   +L+++L +++  RC +  EL+  +  LP FL    +V LV++D IA PFR D     E    + R++N +A++L ++A A  +AVV+TNQ                        P LGESW     +RL+  W N    R ATL K P Q  ST+ F +T  G RDV
Sbjct:   90 IITFCSALDDILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGLAGEAVFIDTEGSFMVDRVVDIAAACVQHCQLIAETHQ--------EEDFQKSLETFSLESILSHIYYFRCHDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHD----FEDLSLRTRLLNGLAQQLISIANAHKLAVVLTNQ-----------MTTRIGQSQSMLVPALGESWGHAATIRLIFHWDNKQ--RLATLYKSPSQKESTIPFHITPHGFRDV 339          
BLAST of NO04G00810 vs. NCBI_GenBank
Match: XP_016394587.1 (PREDICTED: DNA repair protein RAD51 homolog 3 [Sinocyclocheilus rhinocerous])

HSP 1 Score: 177.6 bits (449), Expect = 8.200e-41
Identity = 113/292 (38.70%), Postives = 160/292 (54.79%), Query Frame = 0
Query:   93 SALDLLKAARQPATSTGSKIITFCRAIDTMLGGGVQRGQLMEIVGIPGSGKTQVGIQLAIDAQIPRSFRGAGGKAVFIDTEGAFMAERAAEMGQALIDHLQRILASNQCKXXXXXXXXXXXXDVAGLTLKTVLGNVWVLRCLNDAELMQTLQHLPAFLDSEPEVVLVVIDSIALPFRQDKMFQTESAVAKARVVNVMARELNALAEARNVAVVVTNQXXXXXXXXXXXXXXXXXXXXXXXAPTLGESWAPGPAVRLLLWTNDMGLRCATLQKHPGQAHSTVAFRVTTMGIRD 385
            +ALDLL   +    + GS I+TFC A+D  LGGGV  G+  EI G PG GKTQ+ +QLA+D QIP  F G GGKA++IDTEG+F+ +R A+M +A + H   +    + +             +  LT++ +L N++++RC +  EL+  +  LP FL   PEV LVVIDSIA PFR D     E    + R++N +A++L  LA   +VAVV+TNQ                        P LGESW      RL+L    +  R A+L K P Q  +T+ +++T  G RD
Sbjct:   72 TALDLLHQEQ----ALGS-IVTFCSALDDALGGGVPVGKTTEICGSPGVGKTQLCMQLAVDVQIPVCFGGLGGKALYIDTEGSFLVQRVADMAEAAVQHCTLLAEDTEQRQA-----------LEELTVEKILSNIFLVRCHDYVELLAEVYLLPDFLSEHPEVRLVVIDSIAFPFRHD----FEDLSQRTRLLNGLAQQLIQLATQHSVAVVLTNQ-----------MTTRVSNGQSKLVPALGESWGHAATQRLILHWEGL-RRLASLYKSPSQMEATIQYQITVQGFRD 331          
BLAST of NO04G00810 vs. NCBI_GenBank
Match: XP_024067055.1 (DNA repair protein RAD51 homolog 3 [Terrapene mexicana triunguis])

HSP 1 Score: 177.6 bits (449), Expect = 8.200e-41
Identity = 106/275 (38.55%), Postives = 149/275 (54.18%), Query Frame = 0
Query:  112 IITFCRAIDTMLGGGVQRGQLMEIVGIPGSGKTQVGIQLAIDAQIPRSFRGAGGKAVFIDTEGAFMAERAAEMGQALIDHLQRILASNQCKXXXXXXXXXXXXDVAGLTLKTVLGNVWVLRCLNDAELMQTLQHLPAFLDSEPEVVLVVIDSIALPFRQDKMFQTESAVAKARVVNVMARELNALAEARNVAVVVTNQXXXXXXXXXXXXXXXXXXXXXXXAPTLGESWAPGPAVRLLL-WTNDMGLRCATLQKHPGQAHSTVAFRVTTMGIRDV 386
            IITFC A+D +LGGGVQ  ++ EI G PG GKTQ+ +QLA+D QIP  F G  G+AVFIDTEG+FM +R  ++  A + H Q I  ++Q               +   +L+++L +++  RC +  EL+  +  LP FL    +V LV++D IA PFR D     E    + R++N +A++L ++A A  +AVV+TNQ                        P LGESW     +RL+  W N    R ATL K P Q  ST+ F +T  G RDV
Sbjct:   91 IITFCSALDDILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGLAGEAVFIDTEGSFMVDRVVDIATACVQHCQLIAETHQ--------EEDFQKSLETFSLESILSHIYYFRCHDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHD----FEDLSLRTRLLNGLAQQLISIANAHKLAVVLTNQ-----------MTTRIGQSQSMLVPALGESWGHAATIRLIFHWDNKQ--RLATLYKSPSQKESTIPFHITPHGFRDV 340          
BLAST of NO04G00810 vs. NCBI_GenBank
Match: XP_008840900.1 (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X3 [Nannospalax galili])

HSP 1 Score: 177.2 bits (448), Expect = 1.100e-40
Identity = 106/292 (36.30%), Postives = 153/292 (52.40%), Query Frame = 0
Query:   93 SALDLLKAARQPATSTGSKIITFCRAIDTMLGGGVQRGQLMEIVGIPGSGKTQVGIQLAIDAQIPRSFRGAGGKAVFIDTEGAFMAERAAEMGQALIDHLQRILASNQCKXXXXXXXXXXXXDVAGLTLKTVLGNVWVLRCLNDAELMQTLQHLPAFLDSEPEVVLVVIDSIALPFRQDKMFQTESAVAKARVVNVMARELNALAEARNVAVVVTNQXXXXXXXXXXXXXXXXXXXXXXXAPTLGESWAPGPAVRLLLWTNDMGLRCATLQKHPGQAHSTVAFRVTTMGIRD 385
            +AL+LL+        T   IITFC A+D +LGGG+   +  EI G+PG GKTQ+ +QLA+D QIP  F G  G+AVFIDTEG+FM +R  ++  A I HL  I  +++               +   TL+ +L +++  RC +  EL+  +  LP FL    +V LV+IDSIA PFR D     +    + R++N +A+++ +LA    +AV++TNQ                        P LGESW     +RL+        RCA L K P Q  ST+ F++T  G RD
Sbjct:   77 TALELLEQEH-----TQGFIITFCSALDNILGGGIPLMKTTEICGVPGVGKTQLCLQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLHLIAGTDK--------EEEHQKALEDFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSDHSKVRLVIIDSIAFPFRHD----LDDLSLRTRLLNGLAQQMISLANNHRLAVILTNQ-----------MTTKIDKNQALLVPALGESWGHAATIRLIFHWEQKQSRCAVLYKSPSQKESTILFQITPQGFRD 340          
BLAST of NO04G00810 vs. NCBI_GenBank
Match: XP_016338477.1 (PREDICTED: DNA repair protein RAD51 homolog 3 [Sinocyclocheilus anshuiensis])

HSP 1 Score: 176.8 bits (447), Expect = 1.400e-40
Identity = 112/292 (38.36%), Postives = 160/292 (54.79%), Query Frame = 0
Query:   93 SALDLLKAARQPATSTGSKIITFCRAIDTMLGGGVQRGQLMEIVGIPGSGKTQVGIQLAIDAQIPRSFRGAGGKAVFIDTEGAFMAERAAEMGQALIDHLQRILASNQCKXXXXXXXXXXXXDVAGLTLKTVLGNVWVLRCLNDAELMQTLQHLPAFLDSEPEVVLVVIDSIALPFRQDKMFQTESAVAKARVVNVMARELNALAEARNVAVVVTNQXXXXXXXXXXXXXXXXXXXXXXXAPTLGESWAPGPAVRLLLWTNDMGLRCATLQKHPGQAHSTVAFRVTTMGIRD 385
            +ALDLL   +    + GS I+TFC A+D  LGGG+  G+  EI G PG GKTQ+ +QLA+D QIP  F G GGKA++IDTEG+F+ +R A+M +A + H   +    + +             +  LT++ +L N++++RC +  EL+  +  LP FL   PEV LVVIDSIA PFR D     E    + R++N +A++L  LA   +VAVV+TNQ                        P LGESW      RL+L    +  R A+L K P Q  +T+ +++T  G RD
Sbjct:   72 TALDLLHQEQ----ALGS-IVTFCSALDDALGGGLPVGKTTEICGAPGVGKTQLCMQLAVDVQIPVCFGGLGGKALYIDTEGSFLVQRVADMAEAAVQHCTLLAEDTEQRQA-----------LEELTVEKILSNIFLVRCHDYVELLAEVYLLPDFLSEHPEVRLVVIDSIAFPFRHD----FEDLSQRTRLLNGLAQQLIQLATQHSVAVVLTNQ-----------MTTRVSNGQSKLVPALGESWGHAATQRLILHWEGL-RRLASLYKSPSQMEATIQYQITVQGFRD 331          
The following BLAST results are available for this feature:
BLAST of NO04G00810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_006138730.13.700e-4138.91PREDICTED: DNA repair protein RAD51 homolog 3 [Pel... [more]
XP_007057708.13.700e-4138.10PREDICTED: DNA repair protein RAD51 homolog 3 [Che... [more]
XP_018597458.14.800e-4136.76PREDICTED: DNA repair protein RAD51 homolog 3 isof... [more]
XP_415870.44.800e-4135.31PREDICTED: DNA repair protein RAD51 homolog 3 isof... [more]
XP_010137856.16.300e-4137.54PREDICTED: DNA repair protein RAD51 homolog 3, par... [more]
XP_005298812.18.200e-4138.55DNA repair protein RAD51 homolog 3 isoform X1 [Chr... [more]
XP_016394587.18.200e-4138.70PREDICTED: DNA repair protein RAD51 homolog 3 [Sin... [more]
XP_024067055.18.200e-4138.55DNA repair protein RAD51 homolog 3 [Terrapene mexi... [more]
XP_008840900.11.100e-4036.30PREDICTED: DNA repair protein RAD51 homolog 3 isof... [more]
XP_016338477.11.400e-4038.36PREDICTED: DNA repair protein RAD51 homolog 3 [Sin... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR105ngnoR105Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G00810.1NO04G00810.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|287292gene_1859Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101096g3gene2108Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G00810.1NO04G00810.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G00810 ID=NO04G00810|Name=NO04G00810|organism=Nannochloropsis oceanica|type=gene|length=2202bp
ATAACAGCCAAGCCCCGCCCTCCCCTAGTACTCGTGCCGCACAATAGATG
CCACTGGGCAAGCGTCGCCCACTCTTCACTTTTGACCTGGAATGGCCCGC
AACCCAAGgtaggtcaagccctaccctcttatccctgctccctttttcct
ggcataaacccaaccaccacccactacgtagGTGCACTTCGTCGTAAGGG
CTTTCGCAAAGCAGGCGAGCTTCGGGAGGCCCTGCAAAAAGGGAAAGGCG
AAGATCACCCCATCCTCACTGCCTCCGATCTCGCCACCCGCGgtacgtcc
cctactacccctcctccctccgcccttcccgaatactccctcacttattc
cctccctcactgacagCCTTCACGCCCACCACCTCCGACGTCGACCTAAT
CCGCACTGTCCTCTCCGAGGCGGACGAGTCTCTCAATACTCCTCCTTCCT
CCTCCCTCCCCCTCCCCACCTCGGCCCTGGACCTCTTAAAGGCCGCGCGT
CAACCCGCCACCAGCACAGGAAGCAAAATCATAACCTTTTGTAGGGCTAT
TGACACCATGCTGGGTGGGGGCGTACAGCGAGGGCAATTGATGGAGATTG
TGGGCATACCTGGAAGTGGGAAGACACAGGTGGGGATACAGCTCGCGATT
GACGCGCAGATTCCGCGGTCATTCCGGGGGGCGGGGGGGAAGGCGGTGTT
TATCGgtgagtcaggaggaggaggaagttagagagggaggatggggagga
tgacgccgttttttgccagttagatgaagctgactaagtttgaacgctgt
ctggtctctctcaccttgatcctccgtccctccctcgctccctcccccct
cccttcctccctcccttatactccgtgtgtcctagATACGGAAGGGGCTT
TCATGGCCGAGCGTGCCGCCGAGATGGGCCAAGCCCTTATCGACCATCTC
CAACGCATCCTGGCCTCCAATCAATGCAAGCAGCAGCAGCAACAGCAGCA
GCAGCAGCAGGCGGAGGACGTGGCGGGCTTGACCCTGAAGACGGTGTTGG
GCAACGTGTGGGTGCTTCGGTGTTTGAATGATGCAGAATTAATGCAGACA
CTGCAGCACTTGCCTGCGTTCTTGGATAGTGAGCCGGAGgtgagggaggg
agggaaggaaggaaggagggaggaaaggcgggagggaaggaggggacaac
aggtgtctcatgctcatccacactctccctccctccccccccttttccct
cctgactcttcctcagGTGGTTCTTGTGGTGATAGACAGCATCGCCCTCC
CCTTCCGACAGGATAAGATGTTCCAAACGGAGTCGGCAGTGGCTAAAGCG
CGAGTCGTGAACGTCATGGCCCGCGAATTGAATGCCCTTGCCGAGGCGCG
GAATGTGGCAgtagggagggagggagagagggagggagggagggagggag
ggagggagggagggagggagggtagattggaccacttcgcacatgtccgc
aagctcacgcagtcactaccttccctccctccctccctccctcgctcccg
cgttctttctctttttcacagGTGGTGGTGACCAATCAAATGACGACCAA
GGTCGATGACGCCCATTCAACTGTCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCCTTGCCCCAACCCTCGGCGAGTCCTGGGCCCCTGGTCCCGCCGTG
CGCCTGCTGCTATGGACGAACGACgtacgttgccatgactaagaaaggag
ggggggggggggggagggaaggaacgaagggatacctcagtggccgtggt
cggataatgcacccttcccctccctccctccctccctcccagATGGGTCT
CCGATGCGCCACCTTGCAGAAGCACCCGGGACAGGCACATTCCACAGTGG
CTTTTCGCGgtatgtaaccactgctgggtatctctccctcccttcctccc
ttcctcccgccctcccgccctcccgcccttgctctgtctcttactccgtt
cactgcagcctcgaatccattcactctttcttgctcttgcttccctccct
ccctctctccttccccctctcctcgaccagTCACGACTATGGGCATACGT
GACGTTTCCTCTTCCTCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTCTCG
GAAGCGGCCTGCGCTGCCCCCTCGCTCTCCACCACCCCGTCAACAACAGT
AA
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protein sequence of NO04G00810.1

>NO04G00810.1-protein ID=NO04G00810.1-protein|Name=NO04G00810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=417bp
MPLGKRRPLFTFDLEWPATQGALRRKGFRKAGELREALQKGKGEDHPILT
ASDLATRAFTPTTSDVDLIRTVLSEADESLNTPPSSSLPLPTSALDLLKA
ARQPATSTGSKIITFCRAIDTMLGGGVQRGQLMEIVGIPGSGKTQVGIQL
AIDAQIPRSFRGAGGKAVFIDTEGAFMAERAAEMGQALIDHLQRILASNQ
CKQQQQQQQQQQAEDVAGLTLKTVLGNVWVLRCLNDAELMQTLQHLPAFL
DSEPEVVLVVIDSIALPFRQDKMFQTESAVAKARVVNVMARELNALAEAR
NVAVVVTNQMTTKVDDAHSTVSSSSSSSSSSLAPTLGESWAPGPAVRLLL
WTNDMGLRCATLQKHPGQAHSTVAFRVTTMGIRDVSSSSSSSSSSSSSSR
KRPALPPRSPPPRQQQ*
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Synonyms
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