NO04G00770, NO04G00770 (gene) Nannochloropsis oceanica

Overview
NameNO04G00770
Unique NameNO04G00770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3425
Alignment locationchr4:263489..266913 -

Link to JBrowse

Properties
Property NameValue
Descriptionpre-mRNA 3' end processing protein WDR33
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:263489..266913 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Homology
BLAST of NO04G00770 vs. NCBI_GenBank
Match: EWM28479.1 (isoform a, partial [Nannochloropsis gaditana])

HSP 1 Score: 323.2 bits (827), Expect = 1.700e-84
Identity = 157/192 (81.77%), Postives = 168/192 (87.50%), Query Frame = 0
Query:    1 MPPGP-PLSSSTNA----YGPASVVSSSLNDRGAGAP-RVRRPKRKKPLDPTGSIMLQMEGEPFWTDWRDKPVIQPHSSYFKYLTPPAANLHNPISSLPLFHLRSIVIRDKEKQKGPIFVAKWDPTGRRLLTGSESGYVVVIQGTPIKTWMAHDNAIKCMQWSANGNFMLTGARNGIIKYWARLNSVSAYDL 187
            MPPGP P   + NA    YGPA   SS + ++G  A  R RRPKRKKPLDPT ++MLQMEG PFWT WRD+PVIQPHSSYFKYLTPPAANLHNP+SSLPLFHLRSIVIRDKEKQKGPIFVA WDPTGRRLLTGSESGYVVVIQGTPIKTWMAHDNAIKCM+WS NGNFMLTGARNGIIKYWARLNSV+A+DL
Sbjct:    1 MPPGPSPAFDANNAGMSTYGPAFGASSPVLNKGVDATGRARRPKRKKPLDPTAAVMLQMEGAPFWTTWRDQPVIQPHSSYFKYLTPPAANLHNPVSSLPLFHLRSIVIRDKEKQKGPIFVASWDPTGRRLLTGSESGYVVVIQGTPIKTWMAHDNAIKCMKWSGNGNFMLTGARNGIIKYWARLNSVAAFDL 192          
BLAST of NO04G00770 vs. NCBI_GenBank
Match: CFW94167.1 (Csa-G protein beta 2, partial [Cupiennius salei])

HSP 1 Score: 174.5 bits (441), Expect = 9.800e-40
Identity = 104/402 (25.87%), Postives = 162/402 (40.30%), Query Frame = 0
Query:   33 RVRRPKRKKPLDPTGSIMLQMEGEPFWTDWRDKPVIQPHSSYFKYLTPPAANLHNPISSLPLFHLRSIVIRDKEKQKGPIFVAKWDPTGRRLLTGSESGYVVVIQGTPIK---TWMAHDNAIKCMQWSANGNFMLTGARNGIIKYW-ARLNSVSAYDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAPAGGRCVNTLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAQDMATLRGHRREISCLAWHPFHETLLVSGDKEGCLLYWLTDLSDRPQAEVYGHARDRAVWDLDWHPLGHTLASVGHDHMCKFWARSRPGDPLAG------------DANEYEHATLLGGI 419
            R+R+   +K +D   S++  +E   +  D+RD+  +QP S+Y+  +TPP +   NPI+++    +R+       K + PIF   W P GRRL+TG+ SG   +  G          AHD+ ++CM WS N  +M+TG   G +KYW + +N+V  +                                                                            P++   G+ + T++                                  M Q+M T RGH++E + LAWHP HE+L  SG  +GC+++W+       +      A D  VW L WHPLGH L S  +DH  KFW R+RPGD +              DA +Y+ +T +  I
Sbjct:   51 RLRKAVTRKTVDYNSSVIEYLENRVWQRDYRDRRAMQPDSAYYTEMTPPLSMPDNPINAVTTKFVRT----STNKMRCPIFCVAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRCMVWSHNDVWMVTGDHAGYVKYWQSNMNNVKMFQAHKEPLRGISFCPIDTKFVTCSDDGTVRIWDFLKCFEEKILRGHGADVKCVDWHPTKSLIVSGSKDSQQPIKLWDPKS---GQSLATIHAHKNTVMDAKWNKNGNWLLTASRDHLIKLFDIRNMNQEMQTFRGHKKEATTLAWHPIHESLFTSGGSDGCVMFWVVGAD--KEVGCMEQAHDSCVWSLAWHPLGHILCSGSNDHSSKFWTRNRPGDRMRDKYNLNTLPKGQEDAADYDDSTTMSAI 443          
BLAST of NO04G00770 vs. NCBI_GenBank
Match: XP_013416027.1 (pre-mRNA 3' end processing protein WDR33 [Lingula anatina])

HSP 1 Score: 173.3 bits (438), Expect = 2.200e-39
Identity = 117/381 (30.71%), Postives = 167/381 (43.83%), Query Frame = 0
Query:   33 RVRRPKRKKPLDPTGSIMLQMEGEPFWTDWRDKPVIQPHSSYFKYLTPPAANLHNPISSLPLFHLRSIVIRDKEKQKGPIFVAKWDPTGRRLLTGSESGYVVVIQGTPIK---TWMAHDNAIKCMQWSANGNFMLTGARNGIIKYW-ARLNSVSAYDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAPAGGRCVNTLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAQDMATLRGHRREISCLAWHPFHETLLVSGDKEGCLLYWLTDLSDRPQAEVYG--HARDRAVWDLDWHPLGHTLASVGHDHMCKFWARSRPGDPLAGDAN 408
            R+R+   +K +D   S++  +E   +  D RD+  +QP S Y   L PP A L NP++++   H+R+       K K P+F   W P GRRL+TG+ SG   +  G          AHD++++ MQWS N  ++LTG   G +KYW + +N+V  Y                                                                            PRA   G  + T++XXXXXXXXXXXXX                     M ++M T +GH++E + +AWHP HE +  SG  +G +L+WL         EV G   A D+ +WDL WHP+GH L S  +DH  KFW R+RPGD +    N
Sbjct:   55 RLRKSVYRKTIDYNTSMIQMLENRIWQRDHRDRRALQPDSLYHSELVPPMAMLDNPMNAVTTKHVRT----STNKFKCPVFCVCWTPEGRRLVTGASSGEFTLWSGLTFNFETILQAHDSSVRAMQWSHNDQWLLTGDHGGYVKYWQSNMNNVKMYQAHKEPIRGLSFCPTDSKYTSCSDDGTVRVWDFQHCHEERVLRGHGSDVKCVDWHPQKGLIASGSKDSQQPIKLWDPRA---GNSLATIHXXXXXXXXXXXXXNGNWLLTASRDHLVKLFDIRSMKEEMQTFKGHKKEATTIAWHPIHEGMFASGGSDGAILFWLVG----TDKEVGGMDEAHDQIIWDLAWHPMGHILVSGSNDHSTKFWTRNRPGDHMRDKYN 424          
BLAST of NO04G00770 vs. NCBI_GenBank
Match: XP_013393554.1 (pre-mRNA 3' end processing protein WDR33-like [Lingula anatina])

HSP 1 Score: 173.3 bits (438), Expect = 2.200e-39
Identity = 117/381 (30.71%), Postives = 167/381 (43.83%), Query Frame = 0
Query:   33 RVRRPKRKKPLDPTGSIMLQMEGEPFWTDWRDKPVIQPHSSYFKYLTPPAANLHNPISSLPLFHLRSIVIRDKEKQKGPIFVAKWDPTGRRLLTGSESGYVVVIQGTPIK---TWMAHDNAIKCMQWSANGNFMLTGARNGIIKYW-ARLNSVSAYDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAPAGGRCVNTLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAQDMATLRGHRREISCLAWHPFHETLLVSGDKEGCLLYWLTDLSDRPQAEVYG--HARDRAVWDLDWHPLGHTLASVGHDHMCKFWARSRPGDPLAGDAN 408
            R+R+   +K +D   S++  +E   +  D RD+  +QP S Y   L PP A L NP++++   H+R+       K K P+F   W P GRRL+TG+ SG   +  G          AHD++++ MQWS N  ++LTG   G +KYW + +N+V  Y                                                                            PRA   G  + T++XXXXXXXXXXXXX                     M ++M T +GH++E + +AWHP HE +  SG  +G +L+WL         EV G   A D+ +WDL WHP+GH L S  +DH  KFW R+RPGD +    N
Sbjct:   55 RLRKSVYRKTIDYNTSMIQMLENRIWQRDHRDRRALQPDSLYHSELVPPMAMLDNPMNAVTTKHVRT----STNKFKCPVFCVCWTPEGRRLVTGASSGEFTLWSGLTFNFETILQAHDSSVRAMQWSHNDQWLLTGDHGGYVKYWQSNMNNVKMYQAHKEPIRGLSFCPTDSKYTSCSDDGTVRVWDFQHCHEERVLRGHGSDVKCVDWHPQKGLIASGSKDSQQPIKLWDPRA---GNSLATIHXXXXXXXXXXXXXNGNWLLTASRDHLVKLFDIRSMKEEMQTFKGHKKEATTIAWHPIHEGMFASGGSDGAILFWLVG----TDKEVGGMDEAHDQIIWDLAWHPMGHILVSGSNDHSTKFWTRNRPGDHMRDKYN 424          
BLAST of NO04G00770 vs. NCBI_GenBank
Match: KFM79198.1 (hypothetical protein X975_27120, partial [Stegodyphus mimosarum])

HSP 1 Score: 171.0 bits (432), Expect = 1.100e-38
Identity = 100/379 (26.39%), Postives = 154/379 (40.63%), Query Frame = 0
Query:   33 RVRRPKRKKPLDPTGSIMLQMEGEPFWTDWRDKPVIQPHSSYFKYLTPPAANLHNPISSLPLFHLRSIVIRDKEKQKGPIFVAKWDPTGRRLLTGSESGYVVVIQGTPIK---TWMAHDNAIKCMQWSANGNFMLTGARNGIIKYW-ARLNSVSAYDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAPAGGRCVNTLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAQDMATLRGHRREISCLAWHPFHETLLVSGDKEGCLLYWLTDLSDRPQAEVYGHARDRAVWDLDWHPLGHTLASVGHDHMCKFWARSRPGDPLAGDAN 408
            R+R+   +K +D   S++  +E   +  D+RD+  +QP ++Y+  +TPP A   NPI+++    +R+       K + PIF   W P GRRL+TG+ SG   +  G          AHD+ ++CM WS N  +M+TG   G +KYW + +N+V  +                                                                            P++   G+ + T++                                  M+Q+M T RGH++E + LAWHP HE L  SG  +GC+++W+       +      A D  VW L WHPLGH L S  +DH  KFW R+RPGD +    N
Sbjct:   50 RLRKAVTRKTVDYNSSVIKYLETRVWQRDYRDRRAMQPDTAYYTEMTPPLAMPDNPINAVTTKFVRT----STNKMRCPIFCVAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRCMVWSHNDVWMVTGDHAGYVKYWQSNMNNVKMFQAHKEPLRGISFCPVDTKFVTCSDDGTVRIWDFLKCFEEKILRGHGADVKCVDWHPQKSLIVSGSKDSQQPIKLWDPKS---GQSLATIHAHKNTVMDAKWNKNGNWLLTASRDHLIKLFDIRNMSQEMQTFRGHKKEATTLAWHPVHEGLFSSGGSDGCVMFWVVGAD--KEVGCMEQAHDSCVWSLAWHPLGHILCSGSNDHSSKFWTRNRPGDRMRDKYN 419          
BLAST of NO04G00770 vs. NCBI_GenBank
Match: XP_013777092.1 (pre-mRNA 3' end processing protein WDR33-like [Limulus polyphemus] >XP_022244558.1 pre-mRNA 3' end processing protein WDR33-like [Limulus polyphemus] >XP_022244559.1 pre-mRNA 3' end processing protein WDR33-like [Limulus polyphemus] >XP_022244560.1 pre-mRNA 3' end processing protein WDR33-like [Limulus polyphemus])

HSP 1 Score: 168.3 bits (425), Expect = 7.000e-38
Identity = 103/381 (27.03%), Postives = 153/381 (40.16%), Query Frame = 0
Query:   33 RVRRPKRKKPLDPTGSIMLQMEGEPFWTDWRDKPVIQPHSSYFKYLTPPAANLHNPISSLPLFHLRSIVIRDKEKQKGPIFVAKWDPTGRRLLTGSESGYVVVIQGTPIK---TWMAHDNAIKCMQWSANGNFMLTGARNGIIKYW-ARLNSVSAYDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAPAGGRCVNTLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAQDMATLRGHRREISCLAWHPFHETLLVSGDKEGCLLYWLTDLSDRPQAEVYG--HARDRAVWDLDWHPLGHTLASVGHDHMCKFWARSRPGDPLAGDAN 408
            R+R+   +K +D   SI+  +E   +  D+RD+  +QP   Y+  L PP + + NPI+++    +R+       K + PIF   W P GRRL+TG+ SG   +  G          AHD+ ++CM WS +  +M+TG   G +KYW + +N+V  +                                                                            P+    G+ + TL+                                  M+Q++ T RGH++E   LAWHP HE+L VSG  EG +++W+         EV G   A D  VW L WHPLGH L S  +DH  KFW R+RPGD +    N
Sbjct:   87 RLRKAVARKTVDYNSSILQAVEARVWQRDFRDRRAVQPDVGYYTELIPPVSMIENPINAVTTKFVRT----STNKMRCPIFCVAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRCMMWSHSDVWMVTGDHAGYVKYWQSNMNNVKMFQAHKEPLRGISFCPMDTKFATCSDDGTVRIWDFLRCHEEKILRGHGADVKCLDWHPQKALIVSGSKDSQQPIKLWDPKM---GQSLATLHAHKNTVTEVKWNKNGNWLLTGSRDHLLKLFDIRNMSQEVQTFRGHKKEAISLAWHPVHESLFVSGGSEGSIMFWVVG----ADKEVGGMEQAHDSCVWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDRMRDKYN 456          
BLAST of NO04G00770 vs. NCBI_GenBank
Match: XP_009028704.1 (hypothetical protein HELRODRAFT_115778 [Helobdella robusta] >ESN93260.1 hypothetical protein HELRODRAFT_115778 [Helobdella robusta])

HSP 1 Score: 167.2 bits (422), Expect = 1.600e-37
Identity = 111/399 (27.82%), Postives = 155/399 (38.85%), Query Frame = 0
Query:    6 PLSSSTNAYGPASVVSSSLNDRGAGAPRVRRPKRKKPLDPTGSIMLQMEGEPFWTDWRDKPVIQPHSSYFKYLTPPAANLHNPISSLPLFHLRSIVIRDKEKQKGPIFVAKWDPTGRRLLTGSESGYVVVIQGTPIK---TWMAHDNAIKCMQWSANGNFMLTGARNGIIKYW-ARLNSVSAYDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAPAGGRCVNTLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAQDMATLRGHRREISCLAWHPFHETLLVSGDKEGCLLYWLTDLSDRPQAEVYGHARDRAVWDLDWHPLGHTLASVGHDHMCKFWARSRPGD 401
            P   STN    +S  S+ +     G     +   +K +D   SI+  + G  F  D RD+P IQP   Y   + PP A L NPI+ L    +R  +     K K PIF  KW P GRRL+TG+ SG   +  G          AH+  ++ M WS N  +M+T    G IKYW + +  V  Y +                                                                          PR    G  + T++                                  M +++   RGH++E + +AWHP HE+L  SG  +G +LYWL D+ D+    +  +A +  VW LDWHPLGH LAS  +DH  KFW R+RPGD
Sbjct:   69 PAPMSTNIIMSSSAGSNQVAVSYDGRRMRSKTNIRKTVDYNPSIVNWLHGRIFQNDHRDRPCIQPDQMYNYLMLPPPAFLDNPINCLCTRSIRMAM----NKVKCPIFTVKWTPEGRRLVTGASSGEFTLWHGLTFSFETILQAHECPVRSMVWSRNDQWMITADHGGFIKYWQSNMKYVKMYQIHKEAVRGLSFCPSDQKYASCSDDATVRIWDFLRGEEERILRGHGADVRCIDWHPYMGLLASGSRDAQQPVKLWDPRT---GEALVTIHAHKHTVMDLKWNRNGNWLLTASRDHLLKLFDVRNMKEEVQLFRGHKKEATTIAWHPIHESLFASGGSDGAILYWLVDI-DKEVGSI-ENAHETMVWSLDWHPLGHILASGSNDHTTKFWTRNRPGD 458          
BLAST of NO04G00770 vs. NCBI_GenBank
Match: XP_002113696.1 (hypothetical protein TRIADDRAFT_26233 [Trichoplax adhaerens] >EDV24170.1 hypothetical protein TRIADDRAFT_26233 [Trichoplax adhaerens])

HSP 1 Score: 163.3 bits (412), Expect = 2.300e-36
Identity = 101/381 (26.51%), Postives = 155/381 (40.68%), Query Frame = 0
Query:   33 RVRRPKRKKPLDPTGSIMLQMEGEPFWTDWRDKPVIQPHSSYFKYLTPPAANLHNPISSLPLFHLRSIVIRDKEKQKGPIFVAKWDPTGRRLLTGSESGYVVVIQGTPIK---TWMAHDNAIKCMQWSANGNFMLTGARNGIIKYW-ARLNSVSAYDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAPAGGRCVNTLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAQDMATLRGHRREISCLAWHPFHETLLVSGDKEGCLLYWLTDLSDRPQAEVYG--HARDRAVWDLDWHPLGHTLASVGHDHMCKFWARSRPGDPLAGDAN 408
            R+R+  +++ +D   S++ Q+E   + +D+RD+PVIQP   YF  L PP++   NP++++    +R+       KQ+ PIF   W P GRRL+TG+ SG   +  G          AHD +++ M WS N  ++LT    G IKYW + +N+V  ++                                                                           PR    G  ++TL+                                  M +++ T RGH++E + +AWHP HE L  SG  +G + +W+         EV G   A +  +W L WHPLGH L S  +DH  KFW R+RPGD +    N
Sbjct:   40 RMRKAVQRRTIDYNASVIRQLESRVWQSDYRDQPVIQPDPLYFNSLLPPSSMKQNPMNAVTTKFVRT----STNKQRCPIFCVVWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDTSVRSMIWSHNDTWLLTTDTGGYIKYWQSNMNNVQMFEGHKEAIREASFCPTDIKFTTCSDDGTVKIWDFLRCEEEVTLRGHGADVKCVDWHPQKAMIASGSKDSQQPIKLWDPRI---GSSISTLHLHKSTVMEVKWNKNGNWLLTASRDHLLKIFDIRAM-KELQTFRGHKKEATAVAWHPVHEGLFASGGSDGAMYFWIAGC----DKEVGGIEQAHEGMIWSLAWHPLGHILCSGSNDHSSKFWTRNRPGDKMRDKYN 408          
BLAST of NO04G00770 vs. NCBI_GenBank
Match: XP_023019505.1 (pre-mRNA 3' end processing protein WDR33 [Leptinotarsa decemlineata])

HSP 1 Score: 161.0 bits (406), Expect = 1.100e-35
Identity = 134/421 (31.83%), Postives = 193/421 (45.84%), Query Frame = 0
Query:    5 PPLSSSTNAYGPASVVSSSLNDRGAGAPRVRRPKRKKPLDPTGSIMLQMEGEPFWTDWRDKPVIQPHSSYFKYLTPPAANLHNPISSLPLFHLRSIVIRDKEKQKGPIFVAKWDPTGRRLLTGSESGYVVVIQGTPIK---TWMAHDNAIKCMQWSANGNFMLTGARNGIIKYW-ARLNSVSAYDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAPAGGRCVNTLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAQDMATLRGHRREISCLAWHPFHETLLVSGDKEGCLLYWLTDLSDRPQAEVYGHARDRAVWDLDWHPLGHTLASVGHDHMCKFWARSRPGDPLAGDANEYEHATLLGGIRPL 422
            PP     N + P      ++        R+R+   +K +D   +I+ ++E   +  D+RD+  +QP + Y+  L PP +   NPI+ +    +++       K + PIF   W P GRRL+TG+ SG   +  G          AHD+ ++ M WS N N+M+TG   G +KYW + +N+V     XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                             P++   G+ + TL+                                  ++Q++ T RGH++E S +AWHP HE L  SG  +G +++W   +    +      A D  VW L WHPLGH L S  +DH  KFW R+RPGD +    ++Y   TL  GI  L
Sbjct:   35 PPFRPFMNLHKPLPGPLGNMTLEDFDGKRLRKSVMRKTVDYNAAIIKELENRVWQRDFRDRRALQPDAMYYPDLMPPPSYPDNPINCVTTRFVKTAT----NKMRCPIFCMAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRTMVWSHNDNWMITGDHAGYVKYWQSNMNNVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFFRYQEEQVLRGHGADVKCVHWHPQKALIISGSKDNQQPIKLWDPKS---GQSLATLHAHKSTVMDLKWNDNGNWLITASRDHLLKLFDVRNLSQEVQTFRGHKKEASSVAWHPIHEGLFSSGGSDGAIMFW--HVGADKEVGAIEQAHDSIVWTLSWHPLGHILCSGSNDHTSKFWTRNRPGDQM---RDKYNLNTLPSGIAGL 443          
BLAST of NO04G00770 vs. NCBI_GenBank
Match: XP_013148203.1 (PREDICTED: pre-mRNA 3' end processing protein WDR33 [Papilio polytes])

HSP 1 Score: 160.2 bits (404), Expect = 1.900e-35
Identity = 99/391 (25.32%), Postives = 156/391 (39.90%), Query Frame = 0
Query:   33 RVRRPKRKKPLDPTGSIMLQMEGEPFWTDWRDKPVIQPHSSYFKYLTPPAANLHNPISSLPLFHLRSIVIRDKEKQKGPIFVAKWDPTGRRLLTGSESGYVVVIQGTPIK---TWMAHDNAIKCMQWSANGNFMLTGARNGIIKYW-ARLNSVSAYDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAPAGGRCVNTLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAQDMATLRGHRREISCLAWHPFHETLLVSGDKEGCLLYWLTDLSDRPQAEVYGHARDRAVWDLDWHPLGHTLASVGHDHMCKFWARSRPGDPLAGDANEYEHATLLGGIR 420
            R+R+   +K +D   +I+  +E   +  DWRD+  +QP + Y   L PP +   NPI+++    +++       K + PIF   W P GRRL+TG+ SG   +  G          AHD+ ++ M WS    +M+TG  +G IKYW + +N+V  Y                                                                            P++   G  ++TL+                                  +  ++   RGH++E S + WHP HE L  SG  +G +L+W    +D+    + G A +  VW + WHPLGH L S  +DH CKFW R+RPGD +    ++Y   TL  G++
Sbjct:   59 RLRKSVMRKTVDYNAAIIKALECRVWQRDWRDRHALQPDAMYTPDLLPPPSYPDNPINAVTTRFVKTAT----NKMRCPIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHGEGWMVTGDHSGFIKYWQSNMNNVKMYQAHKEAVRGISFSPSDSKIVTCSDDGTLRIFDFYRCQEERILRGHGADVKCVQWHPTKALIVSGSKDNQQPIKLWDPKS---GTALSTLHAHKSTVMDLKWNDNGNWLITASRDHLLKLFDIRKLGTELQVFRGHKKEASSVVWHPNHEGLFCSGGSDGAILFWNVG-TDKEVGGIEG-AHESIVWTMAWHPLGHILCSGSNDHTCKFWTRNRPGDQM---RDKYNLNTLPPGVQ 437          
The following BLAST results are available for this feature:
BLAST of NO04G00770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28479.11.700e-8481.77isoform a, partial [Nannochloropsis gaditana][more]
CFW94167.19.800e-4025.87Csa-G protein beta 2, partial [Cupiennius salei][more]
XP_013416027.12.200e-3930.71pre-mRNA 3' end processing protein WDR33 [Lingula ... [more]
XP_013393554.12.200e-3930.71pre-mRNA 3' end processing protein WDR33-like [Lin... [more]
KFM79198.11.100e-3826.39hypothetical protein X975_27120, partial [Stegodyp... [more]
XP_013777092.17.000e-3827.03pre-mRNA 3' end processing protein WDR33-like [Lim... [more]
XP_009028704.11.600e-3727.82hypothetical protein HELRODRAFT_115778 [Helobdella... [more]
XP_002113696.12.300e-3626.51hypothetical protein TRIADDRAFT_26233 [Trichoplax ... [more]
XP_023019505.11.100e-3531.83pre-mRNA 3' end processing protein WDR33 [Leptinot... [more]
XP_013148203.11.900e-3525.32PREDICTED: pre-mRNA 3' end processing protein WDR3... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR105ngnoR105Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G00770.1NO04G00770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|636951gene_1856Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101210g1gene2105Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G00770.1NO04G00770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G00770 ID=NO04G00770|Name=NO04G00770|organism=Nannochloropsis oceanica|type=gene|length=3425bp
ACAGACGTGGTGTCGGAGCCAGCCGGGCAAAAATAGGCCCCGGAACCCAC
GACTTCCTTTCTTCCATTCTTCACCTCCCGACCCTAGCCTCCTACAACGA
TCATGCCTCCCGGCCCTCCTCTAAGCAGCAGCACCAACGCCTATGGCCCT
GCCTCAGTCGTCTCCTCATCACTTAATGACAGAGGCGCAGGAGCCCCCCG
CGTACGTCGACCCAAGCGAAAGAAGCCATTGGATCCCACGGGGTCTATCA
TGCTGCAAATGGAAGGCGAGCCCTTTTGGACGGATTGGCGGGACAAGCCT
GTCATTCAGgtatggccagaaaggaatgaagagaaatgggcgaggggtag
caaagccatcctagagagcagggacaaatacatggcgacgtgtccaccga
accaatttttccatcctcacctctccgtctccctccctccctcttcccta
ccccaagCCCCACTCCTCCTACTTCAAGTACCTCACCCCCCCGGCCGCCA
ATCTGCACAATCCCATTTCCTCCCTCCCGCTCTTTCACCTTCGTTCCATC
GTCATCCGCGACAAGGAGAAACAAAAAGGGCCCATCTTCGTCGCGAAGTG
GGACCCCACGGGTCGGCGTCTCTTGACAGGGAGCGAGTCGGGCTATGTGG
TGGTGATCCAGGGAACGCCCATCAAGACCTGGATGgtgagttggagggag
agagggagggagggaaggagggaaggaagggggttggacccttgcattgg
gctcagcgcgcagggaaactgaaacgctgactctcgctttcatttctctg
ctcctcctcctccctccttccttcccttcctccctcccttcctctctttc
tctctagGCGCACGATAATGCGATCAAGTGCATGCAGTGGTCAGCTAACG
GCAACTTTATGCTTACCGGTGCCCGCAACGGCATCATCAAgtacgtccct
ccatcccttcctcccttccttccttcctccctcacgccccctgcctttca
cctccggtctactcatccctccctccctccattttcctccctccctccct
tccttatcccgacataaagATACTGGGCGCGGCTCAACAGTGTGTCGGCC
TATGACCTCAAGGCGCATGATGGGGAGGTCACAGCCGTTTCCTTCGCGCC
AAGCGACACCAAGTTTGTGTCGTCGAGCGATGATCAGgcagggagggagg
aaggaaggaagggagggagggagggagggtagacgatgaacatgagagga
ttgactgtttgttcaccctccctccctccctcccttccttcctccctccc
tccctccctccctcgtgtccatgagagcagACGTTGAAGGTGTGGGATTT
TGCACGGCATGAGGTGGATGTGGACTTGCAGGGGCACACCTGgtgaggag
aagggagggagggagggagggagggaaggaataaggaaatggaacaaatg
ccaactaaagccccctccctccctccttccctccctccctctctctcttt
cgttcgttaactgctatcgtcgcagGGACATAAAATCCGCGCAATGGCAC
CCGCATAAAGCCCTCGTGGCCTCGTGTAGCAAGGACAGCACTGTGAAGCT
CTGGGATCCCCGGGCGCCTGCCGGAGGTCGGTGTGTCAACACGCTTTACG
GCCACAAGAGCCAGGTGTTTAAGgtacaccctccctccctcgttccatcc
ctccctccctccttttcactgcttagacatgcgtcttcatggattcggtc
ctgaccctccttctcatacatgcattaccctctctatcttccctcttccc
ctctctccttccgtccctcctttcctttttcctgcagGTGGCGTTCAATC
CCAACGGCCGCTGGCTCTTGAGTGGAGGCCAAGATGCCCTTATCAAGATG
TGGGATCTGCGGATGATGgtacgccctccctctctccctccctccctccc
tccctcctcctccgggctttttcgtgttcgtttcccttccatcccaaaat
tgtcgacacccccctcctcatgcacccgccctccctccctccctccctcc
ctccctccctccccctcttgtcacagGCGCAAGACATGGCCACCCTGAGG
GGACACAGGCGAGAGATCTCCTGCCTGGCCTGGCATCCATTCCACGAAAC
CCTCCTCGTGTCAGGGGATAAAGAAGGCTGTCTGTTGTACTGGCTGACGG
ATCTCTCCGACAGGCCGCAGGCTGAGGTCTACGGGCACGCCCGgtaagga
gggagggagggagggggggaggagacgatccgatccgcaggaggggagga
gacgatccgatccgctgccagctccagttttgacggtctgaggaatcacc
ttcactaatccatcgcttcctaccccccgccctcgcccagAGACCGAGCC
GTGTGGGACCTGGATTGGCATCCTCTCGGTCACACGCTGGCGAGTGTCGG
ACACGACCACATGTGCAAGTTCTGGGCACGCAGTCGgtacgccctccctc
cctccctccctccccctcttaaagttgggcggcctgggactcggattggc
atcttctcggtcacatacctggccgtgcccgaagcctccctccctccctc
cctccctccctccctccctccctccctgattcttttgtattctgacgaga
taccccctgtctgtggctacatttactaccctctttcatcttgaacctcc
ctccctccctccctccctcctagTCCTGGCGACCCCCTGGCTGGGGATGC
CAATGAATACGAACACGCCACCTTATTGGGGGGAATACGTCCTCTCTTGC
TGGAGGAAGGGGAGGAGGACGAGGACGAGGACGAGGCAGGGGGCGAGGAG
GGGGAGGAAGAGGAGGAGGAGGAGGAGGAAGAGGAAGGGAATGGAGGAAA
AAAGAGGAGGAGAAAGAAGAAGAAGCGGCGGGAGGGTGATGAGGAGGTTG
TGGAGCTGCCGGGGGTGGGCGCCACGCATGTGATGGACAAGACCGTCGgt
acgtccttccctccctccctctctccctccctcccttcttccctccctcc
ctccctccctacatttcccttctgtccgcccacgtcttgtctctccctct
ctctctctctcccttcctccctccctcccctttcgcagTCGCCACCACGG
GCCCCAATTCTCTTAACATCGAGTCCGTTCGCGCCAATCTCCGCGACCAA
AATATCATTCCTATGCCTGCCCGACGGGGCGGGAGGGACGGAGGGTGGGA
GGGAGGAGGAGAGGGAGGACGAGGTGGAGGAGGAGGGAGATTTTTCGGGG
GAGGGGGAGGGGGGAGGGAGGGAGGTACGGAGGGAGGGGGAGAGGGGAGG
GGGGAGGCAGATTTGGAGGAGGGGGAGGGAGAGGGGATTTTGTCTGTCAT
GGATGTGGGGGTACTGGACATATAA
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protein sequence of NO04G00770.1

>NO04G00770.1-protein ID=NO04G00770.1-protein|Name=NO04G00770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=584bp
MPPGPPLSSSTNAYGPASVVSSSLNDRGAGAPRVRRPKRKKPLDPTGSIM
LQMEGEPFWTDWRDKPVIQPHSSYFKYLTPPAANLHNPISSLPLFHLRSI
VIRDKEKQKGPIFVAKWDPTGRRLLTGSESGYVVVIQGTPIKTWMAHDNA
IKCMQWSANGNFMLTGARNGIIKYWARLNSVSAYDLKAHDGEVTAVSFAP
SDTKFVSSSDDQTLKVWDFARHEVDVDLQGHTWDIKSAQWHPHKALVASC
SKDSTVKLWDPRAPAGGRCVNTLYGHKSQVFKVAFNPNGRWLLSGGQDAL
IKMWDLRMMAQDMATLRGHRREISCLAWHPFHETLLVSGDKEGCLLYWLT
DLSDRPQAEVYGHARDRAVWDLDWHPLGHTLASVGHDHMCKFWARSRPGD
PLAGDANEYEHATLLGGIRPLLLEEGEEDEDEDEAGGEEGEEEEEEEEEE
EGNGGKKRRRKKKKRREGDEEVVELPGVGATHVMDKTVVATTGPNSLNIE
SVRANLRDQNIIPMPARRGGRDGGWEGGGEGGRGGGGGRFFGGGGGGREG
GTEGGGEGRGEADLEEGEGEGILSVMDVGVLDI*
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