NO03G05740, NO03G05740 (gene) Nannochloropsis oceanica

Overview
NameNO03G05740
Unique NameNO03G05740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1633
Alignment locationchr3:1648016..1649648 +

Link to JBrowse

Properties
Property NameValue
DescriptionTocopherol polyprenyltransferase-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1648016..1649648 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR000537UbiA_prenyltransferase
Homology
BLAST of NO03G05740 vs. NCBI_GenBank
Match: EWM30055.1 (tocopherol polyprenyltransferase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 570.9 bits (1470), Expect = 3.200e-159
Identity = 298/387 (77.00%), Postives = 336/387 (86.82%), Query Frame = 0
Query:   14 AAAPCLVLTILLIVVGAPTIHAFIIPSLPPSVIARAYPFHLPRRTTSLPSSSSAFAHSSSPLYSSASAGAIPLEGGLNLPPSKQGGVRDKLDALYRFTRPHTIRGTILASLMGVLRCYIEHPKSFANPLQPLPRALLGLLALLCGNIFIVGINQIYDVDIDKVNKPFLPLAAQRMSGKSAWAVVLAACAGGLAITKSAFSPLIFNMYAAGILAGTLYSVPPFYFKRFPLVAATTIAFVRGFSLNFGVYYAVREALGIPFAWNPIVLFITRFMTVFAAVIAVSKDLPDTEGDRKYDVQTFATRVGVANIARGATAVLFLNYVSAVVQGVVNPSGAFRQWVMVGGHTLLAALLARRYSRLDPKKLSSIKAFYKSIWDLFYLEYVLYPFL 401
            AA   L LT LL+V    T  AF+   +P +  +    F   ++   LP   S  + S   ++SSASAGA PLEGGL++PPSKQGG+RD+LDALYRFTRPHTIRGTILASLMGV RC++EHPK+FANPLQP+PRA+LGLLALLCGN+FIVGINQIYDV+IDKVNKPFLPLAAQRM+GK+AWAVVLAA AGGLAITKS F+PLIFNMYAAGI+AGTLYSVPPFYFKRFPL+AA TIAFVRGFSLNFGVYYAVREALGIPFAWNPIVLFITRFMT+FA VIAVSKDLPDTEGD+KY+V+TFATRVGV N+ARGA  VLFLNY+SA+ QGVVNPSGAFRQWVMVGGHT+LAALL +RY +L+P  L+SIKAFYKSIWDLFYLEY LYPFL
Sbjct:   20 AAPVVLFLTTLLLVNSRST--AFVRSPIPRNPQSPFSNFSGSKKV--LPRYPSDPSSSRIGMHSSASAGAAPLEGGLHVPPSKQGGLRDRLDALYRFTRPHTIRGTILASLMGVFRCFLEHPKAFANPLQPMPRAILGLLALLCGNVFIVGINQIYDVEIDKVNKPFLPLAAQRMTGKAAWAVVLAAGAGGLAITKSFFTPLIFNMYAAGIVAGTLYSVPPFYFKRFPLIAAATIAFVRGFSLNFGVYYAVREALGIPFAWNPIVLFITRFMTIFAGVIAVSKDLPDTEGDKKYNVRTFATRVGVKNMARGAAGVLFLNYLSAIAQGVVNPSGAFRQWVMVGGHTVLAALLIQRYKKLEPDSLASIKAFYKSIWDLFYLEYALYPFL 402          
BLAST of NO03G05740 vs. NCBI_GenBank
Match: CEL95874.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 353.6 bits (906), Expect = 8.100e-94
Identity = 191/356 (53.65%), Postives = 241/356 (67.70%), Query Frame = 0
Query:   52 FHLPRRTTSLP--SSSSAFAHSSSPLYSSASAGAIPL----EGGLNLPPSKQGGVRDKL-DALYRFTRPHTIRGTILASLMGVLRCYIEHPKSFANPLQPLPRALLGLLALLCGNIFIVGINQIYDVDIDKVNKPFLPLAAQRMSGKSAWAVVLAACAGGLAITKSAFSPLIFNMYAAGILAGTLYSVPPFYFKRFPLVAATTIAFVRGFSLNFGVYYAVREALGIPFAWNPIVLFITRFMTVFAAVIAVSKDLPDTEGDRKYDVQTFATRVGVANIARGATAVLFLNYVSAVVQGVVNPSGAFRQWVMVGGHTLLAALLARRYSRLDPKKLSSIKAFYKSIWDLFYLEYVLYPFL 401
            F  P   T +P  SSS A+     P    A   A P+    E  +N+  +    + D +   LY+F+RPHTIRGTILASL+GV+R  +E+P + +  L  L RAL+GLL LL GN+FIVGINQIYDVDIDK+NKPFLP+A+Q +S   AW +V  A + G AI    +  LIF +YA G+  G LYSVPPF FKRFP+VA  TIA VRGF LNFGVYYA R+ALG+PFAWNP V+F+  FMTVFA VIAV+KDLPD +GDR+Y++ TFATRVGV  +A  A+ VL L Y  A++   + P G FR+  M+GGH ++ A + R    LDP  + S+K FYK IWDLFY EY LYPF+
Sbjct:   12 FVAPLARTHMPCCSSSVAYGWQKRPRRPVAMTAATPVAVSTERDVNVEDTGTEAIPDGIFRTLYKFSRPHTIRGTILASLVGVVRAVLEYPNAVSFSL--LQRALMGLLGLLLGNVFIVGINQIYDVDIDKINKPFLPVASQDLSLFWAWVIVTIAGSAGPAIVSHWYPGLIFKLYAFGLTVGALYSVPPFQFKRFPVVAGATIACVRGFLLNFGVYYAARQALGLPFAWNPPVMFLASFMTVFAGVIAVTKDLPDVQGDRQYNISTFATRVGVERVALAASCVLMLAYTGAILAAALTPFGTFRRSTMIGGHAVMMAFVVRNLIGLDPGSVGSVKLFYKRIWDLFYAEYALYPFI 365          
BLAST of NO03G05740 vs. NCBI_GenBank
Match: GAX19896.1 (homogentisate solanesyltransferase [Fistulifera solaris])

HSP 1 Score: 336.7 bits (862), Expect = 1.000e-88
Identity = 181/379 (47.76%), Postives = 247/379 (65.17%), Query Frame = 0
Query:   24 LLIVVGAPTIHAFIIPSLPPSVIARAYPFHLPRRTTSLPSSSSAFAHSSSPLYSSASAGAIPLEGGLNLPPSKQGGVRDKLDALYRFTRPHTIRGTILASLMGVLRCYIEHPKSF--ANPLQPLPRALLGLLALLCGNIFIVGINQIYDVDIDKVNKPFLPLAAQRMSGKSAWAVVLAACAGGLAITKSAFSPLIFNMYAAGILAGTLYSVPPFYFKRFPLVAATTIAFVRGFSLNFGVYYAVREALGIPFAWNPIVLFITRFMTVFAAVIAVSKDLPDTEGDRKYDVQTFATRVGVANIARGATAVLFLNYVSAVVQGVVNPSGAFRQWVMVGGHTLLAALLARRYSRLDPKKLSSIKAFYKSIWDLFYLEYVLYPFL 401
            +++V+   +  AF  PS P ++  + + F LP+  + LP+    F   +       +A                G ++ +L ALY+FTRPHTIRGTIL S+ G  R  ++ P S   AN    LPRA +G++ALL GN FIVGINQIYD DIDK+NKPFLP+A+  MS + AW  V+ +   G  + K  F PL+F +Y+ GI  G +YS+PP   K+ P++A  TIA VRGF LNFGVYYAV++ALG  F+W+P V FI RFMT FA+VIA++KDLPD EGD+ Y ++TFAT++GVA IA+GAT  L LNY+ A+  G+++P+G FR   M+GGH  LAA+L  R+ +L    + S+K +YK IWDLFYLEYVLY  +
Sbjct:    6 IILVLSLTSASAF-CPSKPFAIGLQTHTFQLPKTQSRLPAVEGDFDPEAISRAKEEAAA---------------GSMKARLRALYKFTRPHTIRGTILGSIAGTTRALLDTPGSIASANWGIMLPRAFIGMVALLLGNAFIVGINQIYDEDIDKMNKPFLPVASGEMSKRFAWIAVVVSFLSGPLLVKKFFPPLLFKLYSFGIFLGAIYSIPPVRTKKNPVLAGLTIATVRGFLLNFGVYYAVKDALGASFSWSPKVAFIARFMTTFASVIAITKDLPDVEGDKAYQIETFATKIGVARIAKGATFCLLLNYIHALATGLLSPAGVFRMIPMIGGHIALAAVLIARFRQLQADSIQSVKKYYKHIWDLFYLEYVLYTLI 368          
BLAST of NO03G05740 vs. NCBI_GenBank
Match: XP_002293015.1 (tocopherol polyprenyltransferase-like protein, partial [Thalassiosira pseudonana CCMP1335] >EED89476.1 tocopherol polyprenyltransferase-like protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 325.1 bits (832), Expect = 3.100e-85
Identity = 167/297 (56.23%), Postives = 211/297 (71.04%), Query Frame = 0
Query:  106 ALYRFTRPHTIRGTILASLMGVLRCYIEHPKSF--ANPLQPLPRALLGLLALLCGNIFIVGINQIYDVDIDKVNKPFLPLAAQRMSGKSAWAVVLAACAGGLAITKSAFSPLIFNMYAAGILAGTLYSVPPFYFKRFPLVAATTIAFVRGFSLNFGVYYAVREALGIPFAWNPIVLFITRFMTVFAAVIAVSKDLPDTEGDRKYDVQTFATRVGVANIARGATAVLFLNYVSAVVQGVVNPSGAFRQWVMVGGHTLLAALLARRYSRLDPKKLSSIKAFYKSIWDLFYLEYVLYPFL 401
            ALY+FTRPHTIRGTILAS+ G +R  ++ P +   AN    LPRA++G++ALL GN +IVGINQI+D +ID +NKPFLP+A+  MS   AW VV  +   G  I    F  L+F +Y  G   G +YS+PP   KR PL A  TIA VRGF LNFGVYYAV++A+G PF W+P V FI RFMT FA VIAV+KDLPD EGD+ Y++ TFAT++GV  IA+GAT  LFLNY+ A++ GV++ +G FR   M+GGH  LAALL  R+  LDP+ + SIK +YK IWDLFY EYVLY  +
Sbjct:    1 ALYKFTRPHTIRGTILASIAGTIRALVDTPGAIATANWGAMLPRAVIGMVALLLGNAYIVGINQIFDREIDVLNKPFLPVASGEMSKGIAWGVVGFSGIVGPLIVYKFFPILLFKLYMLGWTLGGIYSIPPIRTKRNPLAAGLTIASVRGFLLNFGVYYAVKDAIGAPFVWSPKVSFIARFMTAFATVIAVTKDLPDIEGDKAYNISTFATKIGVPKIAKGATLCLFLNYIHAILTGVLSKAGTFRALPMIGGHAALAALLLTRFKELDPESMPSIKKYYKHIWDLFYAEYVLYTLI 297          
BLAST of NO03G05740 vs. NCBI_GenBank
Match: OEU13480.1 (hypothetical protein FRACYDRAFT_189402 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 324.3 bits (830), Expect = 5.200e-85
Identity = 167/308 (54.22%), Postives = 219/308 (71.10%), Query Frame = 0
Query:   96 KQGGVRDKLDALYRFTRPHTIRGTILASLMGVLRCYIEHPK--SFANPLQPLPRALLGLLALLCGNIFIVGINQIYDVDIDKVNKPFLPLAAQRMSGKSAWAVVLAACAGGLAITKSAFSPLIFNMYAAGILAGTLYSVPPFYFKRFPLVAATTIAFVRGFSLNFGVYYAVREALGIPFAWNPIVLFITRFMTVFAAVIAVSKDLPDTEGDRKYDVQTFATRVGVANIARGATAVLFLNYVSAVVQGVVNPS-GAFRQWVMVGGHTLLAALLARRYSRLDPKKLSSIKAFYKSIWDLFYLEYVLYPFL 401
            + G ++ ++ ALY+FTRPHTIRGTILAS+ G +R  ++ P   S  N    LPRA++G+ ALL GN FIVGINQIYD +ID++NKPFLP+A+  MS ++AW  V+ +   G  + K+ F PL+F +Y  GI  G +YSVPP   K+ P++A  TIA VRGF LNFGVYYAV++A+G PF W+P V FI RFM  FA+VIAV+KDLPD EGD+ Y ++T ATR G   IA+GAT  L LNYV A++ G++  S  AFR   MVGGH  L ++L  RY +L+P+ L+SIK +YK IWDLFYLEY LY  +
Sbjct:   20 ESGSIKARVRALYKFTRPHTIRGTILASIAGTIRALVDTPGAISTVNWSILLPRAVVGMTALLLGNAFIVGINQIYDKEIDEMNKPFLPVASGEMSKRTAWIAVVVSGVLGPILVKAFFPPLLFQLYCFGIFLGGIYSVPPIRTKKNPILAGMTIATVRGFLLNFGVYYAVKDAIGAPFGWSPKVAFIARFMVAFASVIAVTKDLPDMEGDKAYQIETLATRFGAKRIAQGATVCLSLNYVHAILTGLLAKSTDAFRMIPMVGGHLALVSMLIFRYRQLNPESLASIKQYYKHIWDLFYLEYGLYTLI 327          
BLAST of NO03G05740 vs. NCBI_GenBank
Match: GAX28573.1 (homogentisate solanesyltransferase [Fistulifera solaris])

HSP 1 Score: 322.8 bits (826), Expect = 1.500e-84
Identity = 166/329 (50.46%), Postives = 219/329 (66.57%), Query Frame = 0
Query:   98 GGVRDKLDALYRFTRPHTIRGTILASLMGVLRCYIEHPKSF--ANPLQPLPRALLGLLALLCGNIFIVGINQIYDVDIDKVNKPFLPLAAQRMSGKSAWAVVLAACAGGLAITKSAFSPLIFNMYAAGILAGTLYSVPPFYFKRFPLVAATTIAFVRGFSLNFGVYYAVREALGIPFAWNPIVLFITRFMTVFAAVIAVSKDLPDTEGD------------------------RKYDVQTFATRVGVANIARGATAVLFLNYVSAVVQGVVNPSGAFRQWVMVGGHTLLAALLARRYSRLDPKKLSSIKAFYKSIWDLFYLEYVLYPFL 401
            G ++ +L ALY+FTRPHTIRGTIL S+ G  R  ++ P S   AN    LPRA +G++ALL GN FIVGINQIYD DIDK+NKPFLP+A+  MS + AW  V+ +   G  + K  F PL+F +Y+ GI  G +YS+PP   K+ P++A  TIA VRGF LNFGVYYAV++ALG  F+W+P V FI RFMT FA+VIA++KDLPD EGD                        + Y ++TFAT++GVA IA+GAT  L LNY+ A+  G++ P+G F+   M+GGH  LA +L  R+ +L+   + S+K +YK IWDLFYLEYVLY  +
Sbjct:   64 GSMKARLRALYKFTRPHTIRGTILGSIAGTTRALLDTPGSIASANWGIMLPRAFIGMVALLLGNAFIVGINQIYDEDIDKMNKPFLPVASGEMSKRFAWIAVVVSFLSGPLLVKKFFPPLLFKLYSFGIFLGAIYSIPPVRTKKNPVLAGLTIATVRGFLLNFGVYYAVKDALGASFSWSPKVAFIARFMTTFASVIAITKDLPDVEGDKVSAKLRNALSSVHSVCTNIVGDIKAYQIETFATKIGVARIAKGATFCLLLNYIHALATGLLLPAGVFKMIPMIGGHIALATILVARFRQLEADSIQSVKKYYKHIWDLFYLEYVLYTLI 392          
BLAST of NO03G05740 vs. NCBI_GenBank
Match: XP_005718207.1 (unnamed protein product [Chondrus crispus] >CDF38322.1 unnamed protein product [Chondrus crispus])

HSP 1 Score: 313.9 bits (803), Expect = 7.100e-82
Identity = 168/312 (53.85%), Postives = 209/312 (66.99%), Query Frame = 0
Query:   89 GLNLPPSKQGGVRDKLDALYRFTRPHTIRGTILASLMGVLRCYIEHPKSFANPLQPLPRALLGLLALLCGNIFIVGINQIYDVDIDKVNKPFLPLAAQRMSGKSAWAVVLAACAGGLAITKSAFSPLIFNMYAAGILAGTLYSVPPFYFKRFPLVAATTIAFVRGFSLNFGVYYAVREALGIPFAWNPIVLFITRFMTVFAAVIAVSKDLPDTEGDRKYDVQTFATRVGVANIARGATAVLFLNYVSAVVQGVVNPSGAFRQWVMVGGHTLLAALLARRYSRLDPKKLSSIKAFYKSIWDLFYLEYVLYPFL 401
            G + P     G    L A  +FTRPHTIRGTIL S  G  R  ++  K     L  LP A+LG+LALL GN FIVGINQIYDV +DK+NKPFLPLAA  MS + AWA+VL++   GLAI +  FS LIF +YA G+  G LYSVPPF FKR+P +AA TI+ VRGF +NFGVY+A + ALGIPF W+P + F+  FMT+FA VIA+SKDLPD +GD    V TFATRVG   I     A+L +NY+ A+   V +P+GAFR+ VM  GH +L   L      +DP   +SIK FY+ IW LFY EY+L+PF+
Sbjct:    4 GADSPSPDPPGPSGLLQAFVKFTRPHTIRGTILGSFAGCARALLDSTKLINWAL--LPTAVLGMLALLLGNAFIVGINQIYDVRVDKINKPFLPLAAGEMSIRLAWAIVLSSAFTGLAIVRLCFSRLIFGLYAFGMSFGALYSVPPFRFKRYPALAAITISCVRGFLMNFGVYHATKSALGIPFTWSPPITFLAVFMTIFACVIALSKDLPDMKGDLAEGVPTFATRVGPRKIVNIVVALLGINYLGAIATAVFSPAGAFRRVVMGLGHLVLGGRLFLYQRNIDPNSQTSIKDFYRFIWQLFYSEYLLFPFI 313          
BLAST of NO03G05740 vs. NCBI_GenBank
Match: XP_005794564.1 (hypothetical protein EMIHUDRAFT_95285 [Emiliania huxleyi CCMP1516] >EOD42135.1 hypothetical protein EMIHUDRAFT_95285 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 313.2 bits (801), Expect = 1.200e-81
Identity = 179/369 (48.51%), Postives = 223/369 (60.43%), Query Frame = 0
Query:   55 PRRTTSL--PSSSSAFAHSSSPLYSSASAGAIPLEGGLNLPPSKQGGVRDKLDALYRFTRPHTIRGTILASLMGVLRCYIEHPKSFANPLQPLPRALLGLLALLCGNIFIVGINQIYDVDIDKVNKPFLPLAAQRMSGKSAWAVVLAACAGGLAITKSAFSPLIFNMYAAGILAGTLYSVPPFYFKRFPLVAATTIAFVRG---------------------FSLNFGVYYAVREALGIPFAWNPIVLFITRFMTVFAAVIAVSKDLPDTEGDRKYDVQTFATRVGVANIARGATAVLFLNYVSAVVQGVVNPSGAFRQWVMVGGHTLLAALLARRYSRLDPKKLSSIKAFYKSIWDLFYLEYVLYPFL 401
            P RT  +  P S       S    +S  A A    GG  L     G       A+Y F+RPHT+RGT+LA   GV R  IE P+  A     LPRA+LG++AL+ GN+FIVGINQIYDV+ID+VNKPFLP+AA  MS  +AWAVV A+  GG+ + +S F  LIF +Y+ G+  G LYSVPPF+ KRFPL+A   IA  RG                     F LNFGVYYA REALG+ F W+P V F+ RFMTV+  VIA +KDLPD EGDRK  ++TFATR+G   +A  ATA+L LNYV A+   +    G FR  +M GGH L A  L   + RL+    +SIK FY  IW+LFY EY+LY F+
Sbjct:   20 PSRTLRVHGPVSRDRLGQHSYARATSPIASADEPSGGTTLASRAAGAA----SAVYAFSRPHTVRGTLLACGTGVGRALIESPERLALLPALLPRAMLGVVALVLGNLFIVGINQIYDVEIDQVNKPFLPIAAGAMSPAAAWAVVCASLCGGMGLVRSLFGGLIFQLYSFGLAIGALYSVPPFHLKRFPLLAGLIIACCRGIPPPPSPGCRTPLPLLTLSPRFLLNFGVYYATREALGLGFRWSPQVSFLARFMTVYGVVIAATKDLPDVEGDRKGGIETFATRLGTGRVAAAATAMLALNYVGAIATALAAAPGVFRTTLMAGGHALAAGWLGLAWRRLEVASAASIKRFYGQIWNLFYFEYILYLFI 384          
BLAST of NO03G05740 vs. NCBI_GenBank
Match: XP_005705728.1 (homogentisate solanesyltransferase [Galdieria sulphuraria] >EME29208.1 homogentisate solanesyltransferase [Galdieria sulphuraria])

HSP 1 Score: 309.3 bits (791), Expect = 1.700e-80
Identity = 157/297 (52.86%), Postives = 213/297 (71.72%), Query Frame = 0
Query:  104 LDALYRFTRPHTIRGTILASLMGVLRCYIEHPKSFANPLQPLPRALLGLLALLCGNIFIVGINQIYDVDIDKVNKPFLPLAAQRMSGKSAWAVVLAACAGGLAITKSAFSPLIFNMYAAGILAGTLYSVPPFYFKRFPLVAATTIAFVRGFSLNFGVYYAVREALGIPFAWNPIVLFITRFMTVFAAVIAVSKDLPDTEGDRKYDVQTFATRVGVANIARGATAVLFLNYVSAVVQGVVNPSGAFRQWVMVGGHTLLAALLARRYSRLDPKKLSSIKAFYKSIWDLFYLEYVLYPFL 401
            L+A+ +F+RPHT+RGT+LA++ G LR  +E     +  L  L RALLG++AL+ GNIFIVGINQIYD+D+DKVNKPFLPLAA+ M    AW VV+ +   G+AIT+  FS LIF +Y +G+  G LYS+PPF  +R+P +AA TI+FVRGF LNFGVY+A + ALG+ F WNPI++F   FMT++A VIA++KDLPD +GD++Y V+TFA ++GV  + +  T +L  NY+ A+V G+V P G F +  M+  H+ LA L  R   RL P    S+ AFY+SIW+LFY EY + PFL
Sbjct:   74 LEAISKFSRPHTVRGTLLAAISGCLRAILEGGFFVSKSL--LFRALLGVIALILGNIFIVGINQIYDIDVDKVNKPFLPLAAREMELSLAWLVVVISGICGVAITRVCFSRLIFYLYISGLSFGALYSLPPFRLRRWPWMAAITISFVRGFLLNFGVYHATKAALGLRFQWNPIIVFTACFMTIYACVIALAKDLPDVQGDKQYRVETFAAKMGVEKVVKMVTMLLLSNYIFAIVVGLVAPYGTFSRKTMLLTHSCLALLWIRESKRLQPNNKQSLIAFYRSIWNLFYAEYCILPFL 368          
BLAST of NO03G05740 vs. NCBI_GenBank
Match: KOO33513.1 (homogentisate solanesyltransferase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 308.9 bits (790), Expect = 2.300e-80
Identity = 167/305 (54.75%), Postives = 201/305 (65.90%), Query Frame = 0
Query:  103 KLDALYRFTRPHTIRGTILASLMGVLRCYIEHPKSFANPLQPLPRALLGLLALLCGNIFIVGINQIYDVDIDKVNKPFLPLAAQRMSGKSAWAVVLAACAGGLAITKSAFSPLIFNMYAAGILAGTLYSVPPFYFKRFPLVAATTIAFVRGFSLNFGVYYAVREALGIPFAWNPIVLFITRFMTVFAAVIAVSKDLPDTEGDRKYDVQTFATRVGVANIARGATAVLFLNYVSAVVQGVVNPSGAFRQWVMVGGHTLLAALLARRYSRL-------DPKKLSSIKAFYKSIWDLFYLEYVLYPFL 401
            K  A+Y F+RPHTIRGT+LA   GV R  IE P   A     +PRA LG+LALL GN+FIVGINQIYDV ID +NKPFLP+AA R+S ++AW +V  +   GLAI K  F+PLIF +YA G   G LYSVPPF  KRFPL A  TIA  RGF LNFGVYYA REALG+ F W+  V F+ RFMTV+AAVIAV+KDL D +GDR+  + T A R G   +A GA+AVL LNYV A+    +   G FR+  M GGH L A  L     +L            + IKA+YK IW+LFY EY +YPF+
Sbjct:   16 KATAVYAFSRPHTIRGTLLACFTGVARALIESPVYLALLPALMPRAALGVLALLLGNLFIVGINQIYDVKIDVINKPFLPIAAGRISPRAAWWLVACSGLTGLAIVKRFFNPLIFGLYAFGTTIGALYSVPPFQLKRFPLAAGLTIATCRGFLLNFGVYYATREALGLGFIWSAPVAFLARFMTVYAAVIAVTKDLGDVDGDREGGIDTLALRFGPMAVATGASAVLALNYVGAIATAALAAPGTFRRVFMAGGHALAACWLVAITRKLRAATAPGAQPSAAEIKAYYKQIWNLFYFEYAMYPFI 320          
The following BLAST results are available for this feature:
BLAST of NO03G05740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30055.13.200e-15977.00tocopherol polyprenyltransferase-like protein [Nan... [more]
CEL95874.18.100e-9453.65unnamed protein product [Vitrella brassicaformis C... [more]
GAX19896.11.000e-8847.76homogentisate solanesyltransferase [Fistulifera so... [more]
XP_002293015.13.100e-8556.23tocopherol polyprenyltransferase-like protein, par... [more]
OEU13480.15.200e-8554.22hypothetical protein FRACYDRAFT_189402 [Fragilario... [more]
GAX28573.11.500e-8450.46homogentisate solanesyltransferase [Fistulifera so... [more]
XP_005718207.17.100e-8253.85unnamed protein product [Chondrus crispus] >CDF383... [more]
XP_005794564.11.200e-8148.51hypothetical protein EMIHUDRAFT_95285 [Emiliania h... [more]
XP_005705728.11.700e-8052.86homogentisate solanesyltransferase [Galdieria sulp... [more]
KOO33513.12.300e-8054.75homogentisate solanesyltransferase [Chrysochromuli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005292NSK005292Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05740.1NO03G05740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573475gene_1787Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100225g6gene599Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05740.1NO03G05740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05740 ID=NO03G05740|Name=NO03G05740|organism=Nannochloropsis oceanica|type=gene|length=1633bp
GGACAAGAGTTGCAGCACGAGGGCGAATCCGATCGATAATCATCGTGGTG
ATGACGGCGTGGTCTAAAACATTGAAGCTCTTGCTTTGCATACCACCGCA
CATACGAAAGGGTCCTCCCCCTGTCACAGTGTTTAACCTTACGCACACAT
CTTTATCCACGCGATTTTCCCAACACGCACAAAGGGAGCCGCGCAACACC
GAGCACTCTCCACGCACGACGACGGGCTCTGACTCGCCCTCCTCCTCCTC
CTCCTCAACACCATCAAAGTCATGGCAGTGAGGTGGACGGCAAGGTCGCC
AAGACCGGCAGCTGCAGCACCATGCCTCGTGCTGACCATCCTCCTAATCG
TCGTGGGGGCTCCCACGATCCATGCCTTTATCATCCCCTCCCTTCCCCCT
TCCGTCATCGCCCGGGCCTACCCCTTTCACCTCCCTCGCCGCACTACGAG
TCTACCCTCCTCCTCCTCAGCATTTGCCCATTCCTCCTCGCCCCTCTATT
CAAGCGCCTCGGCCGGTGCCATCCCTTTGGAAGGCGGCCTTAACCTGCCC
CCGTCCAAGCAAGGCGGGGTTCGTGACAAGCTCGATGCCCTCTACCGCTT
CACCCGACCTCACACCATCCGCGGTACCATCCTTGCCTCCCTCATGGGCG
TCCTCCGCTGTTATATCGAGCATCCCAAATCCTTTGCTAATCCGCTCCAG
CCTTTGCCAAGGGCTTTGCTTGGCCTCCTGGCCTTGCTGTGCGGCAACAT
ATTCATCGTGGGCATCAACCAAATTTACGACGTAGACATCGACAAGGTCA
ATAAGCCCTTTCTTCCCCTGGCCGCCCAGCGCATGTCGGGCAAATCTGCA
TGGGCCGTGGTGTTGGCTGCTTGTGCGGGCGGGTTGGCCATTACTAAGTC
TGCTTTTAGCCCCCTCATCTTCAACATGTACGCTGCGGGCATCCTGGCGG
GAACCCTCTACTCCGTGCCGCCCTTCTACTTTAAGCGCTTCCCGCTCGTG
GCAGCAACTACTATCGCCTTTGTGCGTGGCTTTAGTTTGAACTTCGGGGT
GTACTACGCGGTGCGGGAGGCGCTGGGCATCCCGTTCGCCTGGAACCCCA
TAGTGCTCTTCATCACCCGCTTTATGACTGTCTTCGCCGCCGTTATCGCC
GTCTCCAAAGACCTGCCCGACACGGAGGGCGACCGAAAGTATGATGTTCA
AACGTTTGCCACACGGGTGGGCGTCGCAAACATTGCGCGAGGGGCGACGG
CCGTCCTCTTTCTCAACTACGTGTCGGCCGTCGTGCAGGGAGTAGTCAAC
CCAAGCGGCGCCTTCAGGCAGTGGGTGATGGTGGGGGGACACACACTCTT
GGCCGCGCTCTTGGCACGACGGTACTCAAGGCTAGACCCCAAGAAACTGA
GCTCCATCAAGGCCTTCTACAAGAGCATCTGGGATTTGTTTTACCTGGAG
TATGTACTTTACCCTTTCCTGTAGGCTTGCAGCGTAAACGGGAAAGATTT
CAATGCAAATAATGCCAACCGTTTCTTTTTATATTTGGAGCCGTACGTTT
TAAATCTTTGAGCACACGACAGCATGGTACTGGACCCAAAAGCCCACTGC
AAACAAAAAAAAACGTGTGACGACTAGAAGCGT
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protein sequence of NO03G05740.1

>NO03G05740.1-protein ID=NO03G05740.1-protein|Name=NO03G05740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=401bp
MAVRWTARSPRPAAAAPCLVLTILLIVVGAPTIHAFIIPSLPPSVIARAY
PFHLPRRTTSLPSSSSAFAHSSSPLYSSASAGAIPLEGGLNLPPSKQGGV
RDKLDALYRFTRPHTIRGTILASLMGVLRCYIEHPKSFANPLQPLPRALL
GLLALLCGNIFIVGINQIYDVDIDKVNKPFLPLAAQRMSGKSAWAVVLAA
CAGGLAITKSAFSPLIFNMYAAGILAGTLYSVPPFYFKRFPLVAATTIAF
VRGFSLNFGVYYAVREALGIPFAWNPIVLFITRFMTVFAAVIAVSKDLPD
TEGDRKYDVQTFATRVGVANIARGATAVLFLNYVSAVVQGVVNPSGAFRQ
WVMVGGHTLLAALLARRYSRLDPKKLSSIKAFYKSIWDLFYLEYVLYPFL
*
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Synonyms
Publications