NO03G05730, NO03G05730 (gene) Nannochloropsis oceanica

Overview
NameNO03G05730
Unique NameNO03G05730
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2531
Alignment locationchr3:1645428..1647958 -

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Properties
Property NameValue
DescriptionDihydrodipicolinate reductase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1645428..1647958 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009089lysine biosynthetic process via diaminopimelate
GO:0055114oxidation-reduction process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:00088394-hydroxy-tetrahydrodipicolinate reductase
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR023940DHDPR_bac
IPR022663DapB_C
IPR000846DapB_N
Homology
BLAST of NO03G05730 vs. NCBI_GenBank
Match: EWM30047.1 (Dihydrodipicolinate reductase [Nannochloropsis gaditana])

HSP 1 Score: 439.5 bits (1129), Expect = 7.700e-120
Identity = 215/253 (84.98%), Postives = 233/253 (92.09%), Query Frame = 0
Query:   24 EEESVEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQAGSEKKVYNMIDVLKAGAM 277
            +EE V+VDDGEGG+ QT+RLVKGP+TG GDEECDARLQGL+AGYR+S TRLIAVDYTHPTAVNPNG LYARHK+DFVMGTTGGDR+KL+ DV   GIYAVIAPNMAKQIVALQAGLETMA TFPGAFEGY L VVESHQSSKADTSGTAKALI+SFG L+GK Y VEDVI MIRDREGQL FGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRR+YAEGTVDAL +LA+Q G +KKV+NM+DVLKAGAM
Sbjct:   81 DEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRVVESHQSSKADTSGTAKALIASFGTLVGKPYKVEDVIAMIRDREGQLEFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRIYAEGTVDALTYLAQQHGPDKKVFNMVDVLKAGAM 333          
BLAST of NO03G05730 vs. NCBI_GenBank
Match: KOO33395.1 (dihydrodipicolinate reductase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 272.3 bits (695), Expect = 1.600e-69
Identity = 153/265 (57.74%), Postives = 184/265 (69.43%), Query Frame = 0
Query:   23 KEEESVEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFG---------VPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQ--AGSEKKVYNMIDVLKAGAM 277
            KE   V VDDG GG   TVRL        G E  D   + + A Y  S + L+ +D+THP+AVN N + YA HKL FVMGTTGGDRE LM    A G YAVIAPNMAKQIVALQA LE MA  FPG+F+GY+L+VVESHQ+SKADTSGTAKA+ +S  +L G++    + I  +R+   QL  G         VPEA L GHAFHTY L+S D +VEFQFRHNV+GR  YAEGTVDA+VFLA+Q  A +EK+VY+M+DVL+AGAM
Sbjct:   43 KEGGEVVVDDGCGGPAVTVRLY-------GTEARDELAERVKAEYPQSGS-LVCIDFTHPSAVNGNAEWYAAHKLPFVMGTTGGDREALMKCTRASGTYAVIAPNMAKQIVALQAALEQMARDFPGSFDGYSLSVVESHQTSKADTSGTAKAISASLARLSGESDFTPERIVRVREPAEQLAGGGPSHTGVSPVPEAALSGHAFHTYSLVSGDKAVEFQFRHNVLGRSTYAEGTVDAVVFLARQMVAKAEKRVYDMVDVLRAGAM 299          
BLAST of NO03G05730 vs. NCBI_GenBank
Match: EJK45557.1 (hypothetical protein THAOC_35827 [Thalassiosira oceanica])

HSP 1 Score: 265.4 bits (677), Expect = 2.000e-67
Identity = 143/256 (55.86%), Postives = 176/256 (68.75%), Query Frame = 0
Query:   24 EEESVEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDS--KTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQAGS-EKKVYNMIDVLKAGAM 277
            E  +V V D   G+   VRL+  P   +G EE    ++  LAG R++  K  ++A+DYTHP+AVN N   YA + L FVMGTTGGDR+KLMDDV +   +AVIAPNM KQIVA+QAGLE +A  FP AF GY L V ESHQ +KADTSGTAKA+I S   L    +++E  I M+RD E  L FGV E  L GHAFHTY L SPD SV+F+ +HNV GR VYAEGT DA+ FLA + GS E KVY+MIDVL++G +
Sbjct:   97 EPSTVTVTDDVTGRSADVRLI--PANEDGREE----IKSSLAGIREAAGKENVLAIDYTHPSAVNGNAVFYAENDLPFVMGTTGGDRDKLMDDVVSRKAFAVIAPNMGKQIVAMQAGLEDLATKFPSAFAGYKLKVTESHQKTKADTSGTAKAVIDSLKTLSDDDFNIEKDIEMLRDDESSLAFGVSEDALNGHAFHTYTLTSPDKSVQFELKHNVEGRTVYAEGTADAVKFLATKVGSGEGKVYSMIDVLRSGGL 346          
BLAST of NO03G05730 vs. NCBI_GenBank
Match: CBN74026.1 (dihydrodipicolinate reductase [Ectocarpus siliculosus])

HSP 1 Score: 263.5 bits (672), Expect = 7.600e-67
Identity = 142/251 (56.57%), Postives = 171/251 (68.13%), Query Frame = 0
Query:   28 VEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQAGS--EKKVYNMIDVLKAGAM 277
            V V D +GG   TV LV      +  E CD  +  L    R S   ++ VDYT P+AVN N + YA+H L+FVMGTTGGDR+ LM      G+YAVIAPNM KQIVALQ+ ++ MA  FPG+F  Y L + ESHQS+K DTSGTAKAL + F KL  + Y V+  I  +RD EGQL FGVPE  L GHAFHTY L S DG+VEFQFRHNV GR +YAEGT DA+ FLA +AGS  +K+VYNM+DVL+ G M
Sbjct:   90 VSVADPKGGDPTTVTLV----PSDDAEGCDKAVAELKR--RCSGGSVVVVDYTTPSAVNANAEFYAKHGLNFVMGTTGGDRDALMSVTEGSGVYAVIAPNMGKQIVALQSAIDNMAREFPGSFGDYKLEITESHQSAKVDTSGTAKALAADFAKLTAEDYDVKS-INKVRDTEGQLAFGVPEEHLAGHAFHTYSLKSNDGTVEFQFRHNVCGRLMYAEGTADAVEFLAGKAGSGADKRVYNMLDVLREGGM 333          
BLAST of NO03G05730 vs. NCBI_GenBank
Match: XP_002291387.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91494.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 258.8 bits (660), Expect = 1.900e-65
Identity = 139/255 (54.51%), Postives = 172/255 (67.45%), Query Frame = 0
Query:   24 EEESVEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQA--GSEKKVYNMIDVLKAGAM 277
            E  ++ V D        VRL+  P T +G  E  + L GL     D    ++A+DYTHP+AVN NG  YA +KL FVMGTTGGDR+ L+ D+ +   +AVIAPNM KQIVA+QAGLE +AA FP AF GY L V ESHQ +KADTSGTAKA+I+S  KL    + +E  I M+RD E  L FGVP+  L GHAFHTY L S DGSV+F+ +HNV GR VYAEGT DA+ FLA +   G   +VY+MIDVL+AGA+
Sbjct:   49 ESSTITVYDDVTDTSANVRLI--PATDDGRMEIVSSLAGLRESVGDK--NVLAIDYTHPSAVNANGVFYADNKLPFVMGTTGGDRDLLLSDMESREAFAVIAPNMGKQIVAMQAGLEDLAAKFPSAFAGYKLEVTESHQKTKADTSGTAKAVIASLKKLSDDDFDMEQDIEMLRDDESSLAFGVPKEALNGHAFHTYTLTSADGSVQFELKHNVSGRTVYAEGTADAVKFLASKVFEGKGGRVYSMIDVLQAGAL 299          
BLAST of NO03G05730 vs. NCBI_GenBank
Match: XP_002177788.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC50602.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 255.0 bits (650), Expect = 2.700e-64
Identity = 140/253 (55.34%), Postives = 170/253 (67.19%), Query Frame = 0
Query:   24 EEESVEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQAGSEK--KVYNMIDVLKAG 275
            E  +  V D   G   +VRLV      + D E    L   +AG + +  RL+A+DYTHP+AVN N K Y    + FVMGTTGGDR++LM DV   G + VIAPNM KQIVA+QA LE +A  +P AFEGY L VVESHQ +KADTSGTAKA+ISS   L G   +  D I+MIRD +  L FGVPE  + GHAFHTY L SPDGSV FQ +HNV GR VYAEGT DA+ FLAK+  +EK  +V+NMI+VL+ G
Sbjct:   36 EASTFIVTDTVTGTSSSVRLVP-----SSDTE---ELVSAVAGMQTASERLLAIDYTHPSAVNGNAKFYVEQNIPFVMGTTGGDRDELMKDVE--GHFCVIAPNMGKQIVAMQAALEDLANKYPSAFEGYQLEVVESHQKTKADTSGTAKAVISSIKTLAGDEKYSNDDIKMIRDEKEALAFGVPEDAMMGHAFHTYTLTSPDGSVSFQLQHNVAGRTVYAEGTADAVKFLAKKMKTEKIPRVFNMINVLEEG 278          
BLAST of NO03G05730 vs. NCBI_GenBank
Match: GAX15254.1 (4-hydroxy-tetrahydrodipicolinate reductase [Fistulifera solaris])

HSP 1 Score: 254.6 bits (649), Expect = 3.500e-64
Identity = 137/254 (53.94%), Postives = 172/254 (67.72%), Query Frame = 0
Query:   24 EEESVEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQAGS-EKKVYNMIDVLKAGAM 277
            E  ++ V D   G+KQ V+L+    T         +LQ  +AG + S   L+A+DYTHP+AVN N + Y + K+ FVMGTTGGDR++LM DV   G + VIAPNM KQIVA+QA LE +A  FPGAF+GY L+V ESHQ +KADTSGTAKA+I S  KL        + I+MIRD +  + FGVP   + GHAFHTY L S DGSV FQ +HNV GR +YAEGT DA+ FL+KQ  S E +V+NMIDVL+ GAM
Sbjct:  108 EPSTISVFDTVTGKKQDVKLIPSKET--------EKLQASIAGLKTS-GNLLAIDYTHPSAVNSNAQFYVKEKIPFVMGTTGGDRDQLMKDVQ--GHFCVIAPNMGKQIVAMQAALEDLATKFPGAFDGYKLSVTESHQKTKADTSGTAKAVIESIEKLASDDNFTIEDIKMIRDDDEAVAFGVPPDAIKGHAFHTYTLTSADGSVSFQLQHNVAGRTIYAEGTADAVKFLSKQIHSGEPRVFNMIDVLEKGAM 350          
BLAST of NO03G05730 vs. NCBI_GenBank
Match: GAX19853.1 (4-hydroxy-tetrahydrodipicolinate reductase [Fistulifera solaris])

HSP 1 Score: 249.6 bits (636), Expect = 1.100e-62
Identity = 137/254 (53.94%), Postives = 172/254 (67.72%), Query Frame = 0
Query:   24 EEESVEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQAGS-EKKVYNMIDVLKAGAM 277
            E  ++ V D    +KQ V+L+         +E + +LQ  +AG + S   L+A+DYTHP+AVN N + Y + K+ FVMGTTGGDR++LM DV   G + VIAPNM KQIVA+QA LE +A  FPGAF+GY L+V ESHQ +KADTSGTAKA+I S  KL        + I+ IRD E  + FGVP   + GHAFHTY L S DGSV FQ +HNV GR +YAEGT DA+ FL+KQ  S E +V+NMIDVLK GAM
Sbjct:   79 EPSTISVYDTVTEKKQDVKLIP-------SKEIE-KLQASIAGLKAS-GNLLAIDYTHPSAVNSNAQFYVKEKIPFVMGTTGGDRDQLMKDVQ--GHFCVIAPNMGKQIVAMQAALEDLATKFPGAFDGYKLSVTESHQKTKADTSGTAKAVIESIEKLASDDNFTIEDIKRIRDDEEAVAFGVPPDAIKGHAFHTYTLTSADGSVSFQLQHNVAGRTIYAEGTADAVKFLSKQIHSGEPRVFNMIDVLKEGAM 321          
BLAST of NO03G05730 vs. NCBI_GenBank
Match: GBG31187.1 (4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 248.4 bits (633), Expect = 2.500e-62
Identity = 139/256 (54.30%), Postives = 175/256 (68.36%), Query Frame = 0
Query:   24 EEESVEVDDGEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLL-GKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQ--AGSEKKVYNMIDVLKAGAM 277
            ++ +VE DD   G   TV LV GP       E + +L+  L   R     ++A+D+THP+AVN N +LY +  L FVMGTTGGDRE L   VA  G++A+IAPNM KQIVA QA ++TMA+T+PGAF GY L + ESHQS KADTSGTAKA++    KL  G  + VED I+ +R+ E Q  FGVP   L GHA+HTY L S DGSV F+F+HNV GRR YAEG VDA+ FLA +   G++KK+Y+MIDVLKAG M
Sbjct:   49 KDVTVEKDD---GGSVTVNLV-GP-----GSEAETQLKEALEKGRSEGKIVVAIDFTHPSAVNRNAELYVKLGLPFVMGTTGGDREALQKVVADNGLFALIAPNMCKQIVAFQAMMDTMASTYPGAFGGYGLEITESHQSGKADTSGTAKAMVEYLNKLKGGDPFDVED-IKKLRESEAQQAFGVPAEALEGHAWHTYTLKSGDGSVVFEFKHNVCGRRTYAEGVVDAVNFLAARINEGADKKLYDMIDVLKAGEM 294          
BLAST of NO03G05730 vs. NCBI_GenBank
Match: GAQ84419.1 (dihydrodipicolinate reductase [Klebsormidium nitens])

HSP 1 Score: 243.8 bits (621), Expect = 6.200e-61
Identity = 132/244 (54.10%), Postives = 165/244 (67.62%), Query Frame = 0
Query:   44 VKGPLTGNGDEEC-DARLQGLLAGYRDS--------KTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQA--GSEKKVYNMIDVLKAGAM 277
            + GP  GN    C    +Q + A  RDS           +I VDYT P AVN N + Y    + FVMGTTGGDR KL+D V   G YAVIAP M KQ+VA QA ++ MA  FPGAF GYTL V ESHQSSK DTSGTAKA++  F K LG  ++V+++ R+    E      VPE  LGGHAFHTY+LLSPDG+V F+F+HNV+GR +YA+GTVDA++FLAK+   G+++K+YNMIDVLK G+M
Sbjct:   54 ITGPKMGNSRVACGGVAVQIIGAEERDSVFDRVLNEYPNVIVVDYTLPAAVNSNAEYYISRGVPFVMGTTGGDRTKLIDTVKKAGTYAVIAPQMGKQVVAFQAAMDIMAQNFPGAFAGYTLKVTESHQSSKVDTSGTAKAIVEYFQK-LGVKFNVDEIERVRDPSEQVRRMHVPEDYLGGHAFHTYKLLSPDGTVAFEFQHNVMGRSIYAQGTVDAVLFLAKKVREGADQKLYNMIDVLKEGSM 296          
The following BLAST results are available for this feature:
BLAST of NO03G05730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30047.17.700e-12084.98Dihydrodipicolinate reductase [Nannochloropsis gad... [more]
KOO33395.11.600e-6957.74dihydrodipicolinate reductase [Chrysochromulina sp... [more]
EJK45557.12.000e-6755.86hypothetical protein THAOC_35827 [Thalassiosira oc... [more]
CBN74026.17.600e-6756.57dihydrodipicolinate reductase [Ectocarpus siliculo... [more]
XP_002291387.11.900e-6554.51predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002177788.12.700e-6455.34predicted protein, partial [Phaeodactylum tricornu... [more]
GAX15254.13.500e-6453.944-hydroxy-tetrahydrodipicolinate reductase [Fistul... [more]
GAX19853.11.100e-6253.944-hydroxy-tetrahydrodipicolinate reductase [Fistul... [more]
GBG31187.12.500e-6254.304-hydroxy-tetrahydrodipicolinate reductase 1, chlo... [more]
GAQ84419.16.200e-6154.10dihydrodipicolinate reductase [Klebsormidium niten... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005293NSK005293Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05730.3NO03G05730.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G05730.2NO03G05730.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G05730.1NO03G05730.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|627063gene_1786Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100225g7gene600Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05730.3NO03G05730.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G05730.2NO03G05730.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G05730.1NO03G05730.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05730 ID=NO03G05730|Name=NO03G05730|organism=Nannochloropsis oceanica|type=gene|length=2531bp
ACAGGCTCGGCTATCTTTTGGGCCGTGTCGTCTGCACCACGCTGCTTCCT
TATCTCCTTCTTTTGGCAGTCCAAGCCACTCTTCCCACGCCCAGCTATTG
CAATGCCTGCCGTTCCTTCCACGCGAGgtaaggcaatctcccctatttgc
cgtgccgtccccacgcttggcgccaattaaatttgccattatcccttccg
cctttataatcccctagGAGCAAGCGCACTCGTGCTCTTGCTCGTTGTCC
TCTTCCCGGCCCTGGTCACCTCCTTCGTTACCCTCCATGGTGCATACAAG
CCCCAACAGCAACCTCGGCATTCGAGCCTCCGCATGATTGCTGCCGCTCC
CAAGgtacggtcaactcctttcattcttctacatgtgtgtgcctttatca
ttctaagatatgtacttgtcgcatcggtgaccttgagatggatttatttc
catgcctgtggttctcctcccgtgctcatcccgtcctctctatctccccc
cctccctcggccatgtgccctctagGTCGCGGTGATGGTTAATGGTTTGC
CGGGTGCTATGGGCAAGGAAGTGGCTGCGGCCTGCCTGCGAAGAGGACTG
GCAGTGTGCTCGGTGGGCTTGACGGGTCCGCAAATTGGTAGGTGCGGGGA
GGGAAGAGGAGAGAAGGGAGCGAAGGAGAAATGCAGGAGGCTATCCTCAT
CGCTTCTTATATTTTTTCTTTTCTTCTCCTCCACTACCGCCATCCCAAAG
AGGAGGAGAGCGTGGAGGTGGATGATGGGGAGGGCGGCCAGAAGCAGACA
GTGCGCTTGGTGAAGGGGCCCCTCACGGGGAACGGCGACGAGGAGTGCGA
CGCCCGGTTGCAAGgtgaggcgagggggtaggatgtgggggaagtatgaa
gagaaagggcagcgtgggtgtatcgccgggtgaaatcactcgaatctggc
tcctgacttcctctctctgtcctccctccctctctccaatcctccctccc
tccctccctccctccctccctccctccctccctccctccctccctccctt
accacaccagGCCTGCTGGCCGGCTACCGTGACAGCAAAACGCGGCTGAT
TGCCGTGGACTACACTCATCCCACTGCTGTGAACCCAAATGGCAAGCTCT
ACGCCCGCCACAAGCTCGACTTCGTCATGgtacacgggcatctcctccct
ccctcctcccctccctccctccctccctccctcctgcgcttcctgcctgc
ccactctaccctccccctgtcccccttcctctaaccttaaaccagGGCAC
GACGGGCGGGGATCGGGAAAAGCTGATGGACGACGTGGCTGCGGGCGGGA
TCTACGCCGTCATTGCCCCCAATATGGCGAAGCAGATCGTGGCCTTGCAG
gtggagaggagggcagggagggagggagggagggagggagggagggaggg
agggtggaacgaaggaaaggtggcatgtcggagggaggccagaactgatg
ctcacacaatcacatacacacccgttagGCGGGCTTGGAGACGATGGCGG
CCACGTTTCCGGGGGCCTTCGAAGGCTACACCCTCAATgtacgtcgtctt
gtctgccctccctccctccacgactcgttgccgtccacccttcttcccct
ccttcgagtgtttcttatccccctttccaggaacatttgtatcgtccttg
cctctcaagtcactcggcttccctcccaccctccctcccgtcctccccct
cggccctagGTGGTGGAGTCCCACCAGAGCAGCAAGGCGGACACCAGCGG
CACGGCCAAGGCCTTGATCAGCTCCTTTGGGAAGCTGCTGGGCAAGGCCT
ACCATGTGGAGGACGTGATCCGCATGATCCGGGATCGGGAGGGGCAGgta
aggatggtggggttccggaaaggtgtgtgcgaggacgtcattaaggagaa
gccctcctgaagcaggttcttccatcccgacctccacgagagtccaacct
cttggaaaagccgccttggtatcccatccgttttcattcttttatcttct
attcctcctctcctccctccttcctccctttctctccccctctccttcag
CTCGGCTTCGGTGTGCCCGAGGCCGGTTTGGGCGGACACGCCTTCCACAC
CTACCAACTCCTCTCACCAGACGGCAGgtacaagtcaggaggggggagat
tgaggctctttatgcttttcctctttggtgatcttctctgagtgtcattc
gggcatcttccgtctttcactctcactcagaccctccctccctccctccc
tccctcccccccgccctccgtaaccctgaagCGTGGAGTTCCAATTCCGA
CACAACGTGGTGGGCCGCCGTGTCTATGCCGAGGGGACGGTGGATGCGTT
GGTATTTTTGGCTAAGCAGGCGGGCAGTGAGAAGAAGGTCTACAATATGA
TTGACGTCTTGAAGGCGGGAGCCATGTAGGGACGGAGGGAGGGTAGGGAG
GAGGGAGGGTAGGGAGGAGGGAGGGTGAGGA
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protein sequence of NO03G05730.3

>NO03G05730.3-protein ID=NO03G05730.3-protein|Name=NO03G05730.3|organism=Nannochloropsis oceanica|type=polypeptide|length=277bp
MQEAILIASYIFSFLLLHYRHPKEEESVEVDDGEGGQKQTVRLVKGPLTG
NGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFV
MGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAF
EGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDRE
GQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDA
LVFLAKQAGSEKKVYNMIDVLKAGAM*
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protein sequence of NO03G05730.2

>NO03G05730.2-protein ID=NO03G05730.2-protein|Name=NO03G05730.2|organism=Nannochloropsis oceanica|type=polypeptide|length=291bp
MPAVPSTRGASALVLLLVVLFPALVTSFVTLHGAYKPQQQPRHSSLRMIA
AAPKVAVMVNGLPGAMGKEVAAACLRRGLAVCSVGLTGPQIEEESVEVDD
GEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHP
TAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQI
VALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKL
LGKAYHVEDVIRMIRDREGQVRMVGFRKGVCEDVIKEKPS*
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protein sequence of NO03G05730.1

>NO03G05730.1-protein ID=NO03G05730.1-protein|Name=NO03G05730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=345bp
MPAVPSTRGASALVLLLVVLFPALVTSFVTLHGAYKPQQQPRHSSLRMIA
AAPKVAVMVNGLPGAMGKEVAAACLRRGLAVCSVGLTGPQIEEESVEVDD
GEGGQKQTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHP
TAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQI
VALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKL
LGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQ
FRHNVVGRRVYAEGTVDALVFLAKQAGSEKKVYNMIDVLKAGAM*
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