NO03G05500, NO03G05500 (gene) Nannochloropsis oceanica

Overview
NameNO03G05500
Unique NameNO03G05500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1404
Alignment locationchr3:1579381..1580784 -

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Properties
Property NameValue
DescriptionFormamidopyrimidine-dna glycosylase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1579381..1580784 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0003906DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0003684damaged DNA binding
GO:0003824catalytic activity
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0006284base-excision repair
GO:0006289nucleotide-excision repair
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR010979Ribosomal_S13-like_H2TH
IPR035937MutM-like_N-ter
IPR012319DNA_glycosylase/AP_lyase_cat
IPR015886DNA_glyclase/AP_lyase_DNA-bd
Homology
BLAST of NO03G05500 vs. NCBI_GenBank
Match: EWM30020.1 (formamidopyrimidine-dna glycosylase [Nannochloropsis gaditana])

HSP 1 Score: 467.2 bits (1201), Expect = 5.800e-128
Identity = 228/362 (62.98%), Postives = 278/362 (76.80%), Query Frame = 0
Query:    1 MPELPEVAALVAALENEAKSKRLLRVLTKEAGGGPRDGLYDDLVFSGTEEQEMHRVLEGRALTGVGRKGKHLWMELSLLPSPPSTSAAFGVGNGRRGGDEGARNTSTLTTSSAPQEDKRFVLFHMGMTGSLLFQHVAIPQYRSFSLDVSKGWPPKFCKAQFIFGNC-EEGKDDEAIQLAFCDQRRWGRVQLLPAGVKDPRMEAPLKELAPDAWKERPSLQVFRDKLKETDIAIKAALLDQGRVLSGLGNWVCDEVLFQAKVDPARRCKALTEGDVRRVWESVDYVCATACAANARSEGFPTGWLFHYRWAKTKKDMAGAKGPEGRRMVFETVGGRTTAIVPSVQRVRRGGDEEKEMGEPGED 362
            MPELPEVAAL +A++ E   +RL+ VLTKE GGGPR GLYDDLVF   +EQE+HR +EGR LT VGR+GKHLWME  L  S PS S     G   RG    ++ + T+       +D RFVLFHMGMTGSL+FQHVAIPQYRSF+LDV++GWPPK CKA+F+F    +EG  +  ++LAFCDQRRWGR+Q+LPAGV DPR E+PLKELAPDAW ERP L VF ++LK TDI +KAALLDQ R++ G+GNWV DEVL+QA  DPA++C  L E +VRRVWE + +VC TACA N RSE FP+ WLFH+RWAK+KKD AG +GP+GRR+VFETVGGRTTAIVPSVQR++ G  ++K  GE  E+
Sbjct:    1 MPELPEVAALASAIKKEVIGRRLVHVLTKEQGGGPRHGLYDDLVFGKADEQEVHRSMEGRVLTAVGRRGKHLWME--LCDSFPSCSQ----GRNHRGSAIPSKASKTM------DDDTRFVLFHMGMTGSLVFQHVAIPQYRSFALDVTEGWPPKHCKAEFVFEESPKEGDRNNELRLAFCDQRRWGRIQILPAGVVDPRTESPLKELAPDAWMERPDLAVFAERLKGTDIPVKAALLDQHRIVCGVGNWVADEVLYQAGADPAKKCSVLKEEEVRRVWEMLAHVCGTACAVNGRSEAFPSDWLFHFRWAKSKKDKAGVRGPDGRRVVFETVGGRTTAIVPSVQRIKGGRIKDKVEGEVVEE 350          
BLAST of NO03G05500 vs. NCBI_GenBank
Match: KOO27539.1 (hypothetical protein Ctob_009641 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 202.2 bits (513), Expect = 3.500e-48
Identity = 129/346 (37.28%), Postives = 174/346 (50.29%), Query Frame = 0
Query:    1 MPELPEVAALVAALENEAKSKRLLRVLTKEAGGGPRDGLYDDLVFSGTEEQE--MHRVLEGRALTGVGRKGKHLWMELSLLPSPPSTSAAFGVGNGRRGGDEGARNTSTLTTSSAPQEDKRFVLFHMGMTGSLLFQHVAIPQYRSFSLDVSKGWPPKFCKAQFIFGNCEEGKDDEAIQLAFCDQRRWGRVQLLPAGVKDPRMEAPLKELAPDAWKERPSLQVFRDKLKETDIAIKAALLDQGRVLSGLGNWVCDEVLFQAKVDPARRCKALTEGDVRRVWESVDYVCATACAANARSEGFPTGWLFHYRWAKTKKDMAGAKGPEGRRMVFETVGGRTTAIVPSVQR 345
            MPELPEV      L     S+R+   +T E GGGPRDGL+D++VF   E     +  +LEG+ L  V R+GK LW+ LS   SPP                                     +L H GMTG+ + + VA   Y+ F +   + WPP+F K +  F   E G       LAFCD RR GR++L      DP+ E P + LAPD   +      + + L      IKA LLDQ  ++SG+GNWV DEVLF A V P   C++L++  V R+  ++ +V   A +  A+ E FP  WLFHYRW K    + G +   G  + F TVGGRT+A+V S QR
Sbjct:    1 MPELPEVETARNLLATHCVSQRITMAVTVEGGGGPRDGLFDEIVFDDKEADAAIVSSLLEGKQLVEVRRRGKQLWLVLS---SPP------------------------------------HLLAHFGMTGAFVVRGVAAQSYKEFRVH-DEAWPPRFTKLELQF---EAGN-----ALAFCDPRRLGRLRLR----ADPQNEEPWRSLAPDPLIDPIEKGRWLEVLAAKGCNIKALLLDQAALVSGVGNWVADEVLFHAGVHPEAICRSLSDAQVDRLRAALTHVLNVAVSCGAKDEEFPRDWLFHYRWGKVPGTVPGER---GGAITFLTVGGRTSAVVLSRQR 291          
BLAST of NO03G05500 vs. NCBI_GenBank
Match: XP_005776340.1 (putative formamidopyrimidine-DNA glycosylase [Emiliania huxleyi CCMP1516] >EOD23911.1 putative formamidopyrimidine-DNA glycosylase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 200.3 bits (508), Expect = 1.300e-47
Identity = 130/344 (37.79%), Postives = 176/344 (51.16%), Query Frame = 0
Query:    1 MPELPEVAALVAALENEAKSKRLLRVLTKEAGGGPRDGLYDDLVFSGTEEQEMHRV-LEGRALTGVGRKGKHLWMELSLLPSPPSTSAAFGVGNGRRGGDEGARNTSTLTTSSAPQEDKRFVLFHMGMTGSLLFQHVAIPQYRSFSLDVSKGWPPKFCKAQFIFGNCEEGKDDEAIQLAFCDQRRWGRVQLLPAGVKDPRMEAPLKELAPDAWKERPSLQVFRDKLKETDIAIKAALLDQGRVLSGLGNWVCDEVLFQAKVDPARRCKALTEGDVRRVWESVDYVCATACAANARSEGFPTGWLFHYRWAKTKKDMAGAKGPEGRRMVFETVGGRTTAIVPSVQ 344
            MPELPEV A  + +E     +R+  ++  E GGGPR+G +DD V +     ++  + L+ R + GV R+GK LW+EL                    G  +G    + L             L HMGMTG+++ Q VA P Y+SF++D    WPP+F K + +  +   G     ++LAF D RR+GRV L  A   DP    PL  LA D   + PS + F   L+     IKAALLDQGRV+ G+GNWV DEVL+QA V PA  C++L+E  +  +   V  VC  AC    R   FP          +T   MA   G    R+ F+TVGGRTTA VP+ Q
Sbjct:    1 MPELPEVEAQRSTIEAATLGRRIATLIAVEQGGGPREGQFDDKVIAEEVTPDVLAITLQDRWVLGVRRRGKQLWLEL--------------------GESKGGACCACL-------------LIHMGMTGAVIVQGVAAPVYKSFAVD-ETAWPPRFTKLELLMADA-AGVSAPCVRLAFTDPRRFGRVLLRGA---DPFSRPPLSALAADPVTDPPSAEAFASVLRRVRAPIKAALLDQGRVVCGVGNWVADEVLYQAGVLPAAPCESLSEEQLAAIHAQVLAVCTAACGRLERGCDFP---------GQTSGSMASPLG----RIHFDTVGGRTTAFVPARQ 293          
BLAST of NO03G05500 vs. NCBI_GenBank
Match: XP_005792640.1 (putative formamidopyrimidine-DNA glycosylase [Emiliania huxleyi CCMP1516] >EOD40211.1 putative formamidopyrimidine-DNA glycosylase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 200.3 bits (508), Expect = 1.300e-47
Identity = 130/344 (37.79%), Postives = 176/344 (51.16%), Query Frame = 0
Query:    1 MPELPEVAALVAALENEAKSKRLLRVLTKEAGGGPRDGLYDDLVFSGTEEQEMHRV-LEGRALTGVGRKGKHLWMELSLLPSPPSTSAAFGVGNGRRGGDEGARNTSTLTTSSAPQEDKRFVLFHMGMTGSLLFQHVAIPQYRSFSLDVSKGWPPKFCKAQFIFGNCEEGKDDEAIQLAFCDQRRWGRVQLLPAGVKDPRMEAPLKELAPDAWKERPSLQVFRDKLKETDIAIKAALLDQGRVLSGLGNWVCDEVLFQAKVDPARRCKALTEGDVRRVWESVDYVCATACAANARSEGFPTGWLFHYRWAKTKKDMAGAKGPEGRRMVFETVGGRTTAIVPSVQ 344
            MPELPEV A  + +E     +R+  ++  E GGGPR+G +DD V +     ++  + L+ R + GV R+GK LW+EL                    G  +G    + L             L HMGMTG+++ Q VA P Y+SF++D    WPP+F K + +  +   G     ++LAF D RR+GRV L  A   DP    PL  LA D   + PS + F   L+     IKAALLDQGRV+ G+GNWV DEVL+QA V PA  C++L+E  +  +   V  VC  AC    R   FP          +T   MA   G    R+ F+TVGGRTTA VP+ Q
Sbjct:    1 MPELPEVEAQRSTIEAATLGRRIATLIAVEQGGGPREGQFDDKVIAEEVTPDVLAITLQDRWVLGVRRRGKQLWLEL--------------------GESKGGACCACL-------------LIHMGMTGAVIVQGVAAPVYKSFAVD-ETAWPPRFTKLELLMADA-AGVSAPCVRLAFTDPRRFGRVLLRGA---DPFSRPPLSALAADPVTDPPSAEAFASVLRRVRAPIKAALLDQGRVVCGVGNWVADEVLYQAGVLPAAPCESLSEEQLAAIHAQVLAVCTAACGRLERGCDFP---------GQTSGSMASPLG----RIHFDTVGGRTTAFVPARQ 293          
BLAST of NO03G05500 vs. NCBI_GenBank
Match: XP_016604971.1 (formamidopyrimidine-DNA glycosylase [Spizellomyces punctatus DAOM BR117] >KNC96931.1 formamidopyrimidine-DNA glycosylase [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 193.0 bits (489), Expect = 2.100e-45
Identity = 143/470 (30.43%), Postives = 210/470 (44.68%), Query Frame = 0
Query:    1 MPELPEVAALVAALENEAKSKRLLRVLTKEAGGGPRDGLYDDLVFSGTEEQEMHRVLEGRALTGVGRKGKHLWMELSLLPSPPSTSAAFGVGNGRRGGDEGARNTSTLTTSSAPQEDKRFVLFHMGMTGSLLFQHVAIPQYRSFSLDVSKGWPPKFCKAQFIFGNCEEGKDDEAIQLAFCDQRRWGRVQLLPAGVKDPRMEAPLKELAPDAWKERPSLQVFRDKLKETDIAIKAALLDQGRVLSGLGNWVCDEVLFQAKVDPARRCKALTEGDVRRVWESVDYVCATACAANARSEGFPTGWLFHYRWAKTKKDMAGAKGPEGRRMVFETVGGRTTAIVPSVQRV-------RRGGDEEKEMGEPGEDGAXXXXXXXXXXXXXXXXXQIMTKK-----------KISKGKRCVKEEVMEEEVGIGRGDEKAESPSIISERAIKVIKMEKDVKMNIPASEKTTTPRRSSPR 453
            MPELPEV      + +   +K ++ V T          + DD+V+ G   QE    ++GR L   GR+GK  ++ L   P P                                       + H+GMTGS+  +  A  +Y+ FS      WPP+F K    F        D+  +LAF D RR  R++L+     DP +  P+ EL  D     P L VF + +++    IKA LLDQ    +G+GNWV DEVLFQA+V PA+   +LT+ ++  + + + +V  TA A NA S  FP  WLFHYRW K +     AK P+G  + FETV GRTTAIVP+VQ++       RR    + E+ E  + GA                 +I  ++           + ++ KR VK+E+   E    +   K++             ++   +K   P +  T TPRR S R
Sbjct:    1 MPELPEVERARLLIHSNFLNKAIVDVET----------VVDDIVYQGCTNQEFATKVKGRTLVDTGRRGKVFYLILDQHPCP---------------------------------------VLHLGMTGSVRIKGQAGLEYKDFS-TAGDDWPPRFYKFVIRF--------DDGQELAFTDMRRLARIRLVDG---DPLLHPPISELGFDPLLSMPDLDVFSETVRKRKCPIKALLLDQA-FSAGVGNWVADEVLFQARVHPAQNTVSLTDAELAALHDQLSFVIKTAVAVNADSSKFPNDWLFHYRWGKGRVTNREAKMPDGSNIKFETVAGRTTAIVPAVQKLHGNTIIGRRKNKTKSELKEE-DTGASHPDAAEEVPIKGNGRKRIKVERDQDIADVESSPRTTRRKRIVKQEITSPEAAEFKPPAKSK-------------RLRTPIKKEEPQTSSTATPRRHSTR 394          
BLAST of NO03G05500 vs. NCBI_GenBank
Match: GAM41609.1 (hypothetical protein TCE0_042r14855 [Talaromyces cellulolyticus])

HSP 1 Score: 191.8 bits (486), Expect = 4.700e-45
Identity = 123/361 (34.07%), Postives = 179/361 (49.58%), Query Frame = 0
Query:    1 MPELPEVAALVAALENEAKSKRLLRVLTKEAGGGPRDGLYDDLVF--SGTEEQEMHRVLEGRALTGVGRKGKHLWMELSLLPSPPSTSAAFGVGNGRRGGDEGARNTSTLTTSSAPQEDKRFVLFHMGMTGSLLFQHVAIPQYRSFSLDVSKGWPPKFCKAQFIFGNCEEGKDDEAIQLAFCDQRRWGRVQLLPAGVKDPRMEAPLKELAPDAWKERPSLQV--FRDKLKETDIAIKAALLDQGRVLSGLGNWVCDEVLFQAKVDPARRCKALTEGDVRRVWESVDYVCATACAANARSEGFPTGWLFHYRWAKTKKDMAGAKGPEGRRMVFETVGGRTTAIVPSVQRVRRGGDEEKEMGE 358
            MPEL EVA +V  +      K L  V  +           DD+V+  +GT   E  + ++G  + G G++GK+ W+ +S    PP                                     V+ H GMTG +  ++     YR+ + D  K WPPK+ K  F+    E  K     + AF D RR  RV+L+     D R   PLKE  PD   ++  L +   +DK+K   + IKA LLDQ  + SG+GNW+ DE+L+ AK+ P +    LT+  ++++  S+DYVC T+    A SE FP  WLF +RW+K KK+      P G ++VF TVGGRT+A+VPSVQ  R+ G   KE+ +
Sbjct:    1 MPELAEVARIVHFIRKHLVGKTLANVQAQN----------DDIVYGKAGTSAAEFQKTMQGNKIVGAGQQGKYFWITMS---KPP------------------------------------HVVMHFGMTGWMKIKNADTYYYRTTNAD-DKDWPPKYWK--FLLETDETPK----TEAAFVDPRRLARVRLVDCPADDIRQYTPLKENGPDPVTDKDILTIEWLQDKIKSKKVPIKALLLDQANI-SGIGNWMGDEILYHAKIHPEQYSNTLTDEQIKQLHTSIDYVCTTSVGVLADSEQFPEEWLFKHRWSKGKKNQPSVL-PNGNKIVFLTVGGRTSAVVPSVQ--RKTGPVAKEISD 301          
BLAST of NO03G05500 vs. NCBI_GenBank
Match: KUL91209.1 (hypothetical protein ZTR_01754 [Talaromyces verruculosus])

HSP 1 Score: 191.8 bits (486), Expect = 4.700e-45
Identity = 124/361 (34.35%), Postives = 178/361 (49.31%), Query Frame = 0
Query:    1 MPELPEVAALVAALENEAKSKRLLRVLTKEAGGGPRDGLYDDLVFS--GTEEQEMHRVLEGRALTGVGRKGKHLWMELSLLPSPPSTSAAFGVGNGRRGGDEGARNTSTLTTSSAPQEDKRFVLFHMGMTGSLLFQHVAIPQYRSFSLDVSKGWPPKFCKAQFIFGNCEEGKDDEAIQLAFCDQRRWGRVQLLPAGVKDPRMEAPLKELAPDAWKERPSLQV--FRDKLKETDIAIKAALLDQGRVLSGLGNWVCDEVLFQAKVDPARRCKALTEGDVRRVWESVDYVCATACAANARSEGFPTGWLFHYRWAKTKKDMAGAKGPEGRRMVFETVGGRTTAIVPSVQRVRRGGDEEKEMGE 358
            MPEL EVA +V  +      K L  V  +           DD+V+   GT   E  + ++G  + G G++GK+ W+ +S    PP                                     V+ H GMTG +  ++     YR+ + D  K WPPK+ K  F+    E  K     + AF D RR  RV+L+     D R   PLKE  PD   ++  L V   +DK+K   + IKA LLDQ  + SG+GNW+ DE+L+ +K+ P +    LT+  ++++  S+DYVCAT+    A SE FP  WLF +RW K KK+      P G ++VF TVGGRT+A+VPSVQ  R+ G   KE+ +
Sbjct:    1 MPELAEVARIVHFIRKHLVDKTLANVQAQN----------DDIVYGKVGTSAAEFQKTMQGNTIVGAGQQGKYFWITMS---KPP------------------------------------HVVMHFGMTGWMKIKNADTYYYRTTNAD-DKEWPPKYWK--FLLETDETPK----TEAAFVDPRRLARVRLVDCPADDIRQYTPLKENGPDPVTDKDILTVEWLQDKIKSKKVPIKALLLDQANI-SGIGNWMGDEILYHSKIHPEQYSNTLTDEQIKQLHTSIDYVCATSVGVLADSEQFPDEWLFKHRWGKGKKNQPSVL-PNGNKIVFLTVGGRTSAVVPSVQ--RKTGPVAKEISD 301          
BLAST of NO03G05500 vs. NCBI_GenBank
Match: PCH03951.1 (hypothetical protein PENOC_036120 [Penicillium occitanis] >PCH09380.1 Ribosomal protein S13-like, H2TH [Penicillium occitanis])

HSP 1 Score: 191.8 bits (486), Expect = 4.700e-45
Identity = 123/361 (34.07%), Postives = 179/361 (49.58%), Query Frame = 0
Query:    1 MPELPEVAALVAALENEAKSKRLLRVLTKEAGGGPRDGLYDDLVF--SGTEEQEMHRVLEGRALTGVGRKGKHLWMELSLLPSPPSTSAAFGVGNGRRGGDEGARNTSTLTTSSAPQEDKRFVLFHMGMTGSLLFQHVAIPQYRSFSLDVSKGWPPKFCKAQFIFGNCEEGKDDEAIQLAFCDQRRWGRVQLLPAGVKDPRMEAPLKELAPDAWKERPSLQV--FRDKLKETDIAIKAALLDQGRVLSGLGNWVCDEVLFQAKVDPARRCKALTEGDVRRVWESVDYVCATACAANARSEGFPTGWLFHYRWAKTKKDMAGAKGPEGRRMVFETVGGRTTAIVPSVQRVRRGGDEEKEMGE 358
            MPEL EVA +V  +      K L  V  +           DD+V+  +GT   E  + ++G  + G G++GK+ W+ +S    PP                                     V+ H GMTG +  ++     YR+ + D  K WPPK+ K  F+    E  K     + AF D RR  RV+L+     D R   PLKE  PD   ++  L +   +DK+K   + IKA LLDQ  + SG+GNW+ DE+L+ AK+ P +    LT+  ++++  S+DYVC T+    A SE FP  WLF +RW+K KK+      P G ++VF TVGGRT+A+VPSVQ  R+ G   KE+ +
Sbjct:    1 MPELAEVARIVHFIRKHLVGKTLANVQAQN----------DDIVYGKAGTSAAEFQKTMQGNKIVGAGQQGKYFWITMS---KPP------------------------------------HVVMHFGMTGWMKIKNADTYYYRTTNAD-DKDWPPKYWK--FLLETDETPK----TEAAFVDPRRLARVRLVDCPADDIRQYTPLKENGPDPVTDKDILTIEWLQDKIKSKKVPIKALLLDQANI-SGIGNWMGDEILYHAKIHPEQYSNTLTDEQIKQLHTSIDYVCTTSVGVLADSEQFPEEWLFKHRWSKGKKNQPSVL-PNGNKIVFLTVGGRTSAVVPSVQ--RKTGPVAKEISD 301          
BLAST of NO03G05500 vs. NCBI_GenBank
Match: XP_002341637.1 (formamidopyrimidine-DNA glycosylase, putative [Talaromyces stipitatus ATCC 10500] >EED24250.1 formamidopyrimidine-DNA glycosylase, putative [Talaromyces stipitatus ATCC 10500])

HSP 1 Score: 189.1 bits (479), Expect = 3.100e-44
Identity = 118/348 (33.91%), Postives = 174/348 (50.00%), Query Frame = 0
Query:    1 MPELPEVAALVAALENEAKSKRLLRVLTKEAGGGPRDGLYDDLVF--SGTEEQEMHRVLEGRALTGVGRKGKHLWMELSLLPSPPSTSAAFGVGNGRRGGDEGARNTSTLTTSSAPQEDKRFVLFHMGMTGSLLFQHVAIPQYRSFSLDVSKGWPPKFCKAQFIFGNCEEGKDDEAIQLAFCDQRRWGRVQLLPAGVKDPRMEAPLKELAPDAWKERP--SLQVFRDKLKETDIAIKAALLDQGRVLSGLGNWVCDEVLFQAKVDPARRCKALTEGDVRRVWESVDYVCATACAANARSEGFPTGWLFHYRWAKTKKDMAGAKGPEGRRMVFETVGGRTTAIVPSVQR 345
            MPEL EVA +V  +      + L  V  +           DD+V+  +GT   E  + ++G  +TG G++GK+ W+ ++    PP                                     V+ H GMTG L  ++     YR+ + D  K WPPK+ K  F+    E  K     + AF D RR  R++L+     D R   PL+E  PD   ++   +L   RDK+K   + IKA LLDQ  + SG+GNW+ DE+L+ +K+ P +    LT   ++++  S+DYVC T+    A SE FP  WLF +RW K KK+ + A  P G ++VF TVGGRT+A+VP+VQR
Sbjct:    1 MPELAEVARIVHFIRKHLVGRTLANVQVQN----------DDIVYGKAGTTAAEFQKAMQGNKITGAGQQGKYFWITMA---KPP------------------------------------HVVMHFGMTGWLKIRNADTYYYRTTNAD-DKEWPPKYWK--FLLETDETPK----TEAAFVDPRRLARIRLVDCPADDIRKYTPLRENGPDPLTDKDILTLDWLRDKIKGKKVPIKALLLDQANI-SGIGNWMGDEILYHSKIHPEQYSNTLTNEQIQQLHNSIDYVCTTSVRVLADSEQFPEDWLFKHRWGKGKKNQSSAL-PNGNKIVFLTVGGRTSAVVPAVQR 290          
BLAST of NO03G05500 vs. NCBI_GenBank
Match: OJJ40537.1 (hypothetical protein ASPWEDRAFT_100210 [Aspergillus wentii DTO 134E9])

HSP 1 Score: 188.3 bits (477), Expect = 5.200e-44
Identity = 125/366 (34.15%), Postives = 183/366 (50.00%), Query Frame = 0
Query:    1 MPELPEVAALVAALENEAKSKRLLRVLTKEAGGGPRDGLYDDLVF--SGTEEQEMHRVLEGRALTGVGRKGKHLWMELSLLPSPPSTSAAFGVGNGRRGGDEGARNTSTLTTSSAPQEDKRFVLFHMGMTGSLLFQHVAIPQYRSFSLDVSKGWPPKFCKAQFIFGNCEEGKDDEAIQLAFCDQRRWGRVQLLPAGVKDPRMEAPLKELAPD--AWKERPSLQVFRDKLKETDIAIKAALLDQGRVLSGLGNWVCDEVLFQAKVDPARRCKALTEGDVRRVWESVDYVCATACAANARSEGFPTGWLFHYRWAKTKKDMAGAKGPEGRRMVFETVGGRTTAIVPSVQRVRRGGDEEKEMGEPGEDG 363
            MPEL EV+ +V  +      K L +V T+          +DD+V+  +GT   E  + ++G+ + G G++GK+ W+ +S   SPP                                      + H GM+G L  +      YRS   +  K WPPK+ K         E  +D   + AF D RR  RV+L+     + R   PLKE  PD  A K+  + +   DKL+   + IKA LLDQ  + SG+GNW+ DE+L+ AKV P +    L++  ++R+  S+ YVC+T+    A SE FP  WLF +RW K KK+ A A  P G +++F TVGGRT+A+VPSVQ  ++ G   KE  + G DG
Sbjct:    1 MPELAEVSRIVHFIRQHLVGKTLSKVSTQ----------HDDIVYGKAGTSASEFEKAMQGKKIVGSGQQGKYFWITMS---SPP------------------------------------HAVMHFGMSGWLKIRDADTYYYRSDKPE-DKAWPPKYWKFML------ETDEDPKTEAAFVDARRLARVRLVDCPADEIRKFTPLKENGPDPVADKDIVTEKWLGDKLRSKKVPIKALLLDQANI-SGIGNWMGDEILYHAKVHPEQYSNTLSDEQIQRIHTSMHYVCSTSVDLLADSEKFPEHWLFKHRWGKGKKN-ASAVLPNGEKIIFLTVGGRTSAVVPSVQ--KKSGVVTKEDNDEGADG 306          
The following BLAST results are available for this feature:
BLAST of NO03G05500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30020.15.800e-12862.98formamidopyrimidine-dna glycosylase [Nannochlorops... [more]
KOO27539.13.500e-4837.28hypothetical protein Ctob_009641 [Chrysochromulina... [more]
XP_005776340.11.300e-4737.79putative formamidopyrimidine-DNA glycosylase [Emil... [more]
XP_005792640.11.300e-4737.79putative formamidopyrimidine-DNA glycosylase [Emil... [more]
XP_016604971.12.100e-4530.43formamidopyrimidine-DNA glycosylase [Spizellomyces... [more]
GAM41609.14.700e-4534.07hypothetical protein TCE0_042r14855 [Talaromyces c... [more]
KUL91209.14.700e-4534.35hypothetical protein ZTR_01754 [Talaromyces verruc... [more]
PCH03951.14.700e-4534.07hypothetical protein PENOC_036120 [Penicillium occ... [more]
XP_002341637.13.100e-4433.91formamidopyrimidine-DNA glycosylase, putative [Tal... [more]
OJJ40537.15.200e-4434.15hypothetical protein ASPWEDRAFT_100210 [Aspergillu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005323NSK005323Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05500.1NO03G05500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573369gene_1762Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100391g3gene627Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05500.1NO03G05500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05500 ID=NO03G05500|Name=NO03G05500|organism=Nannochloropsis oceanica|type=gene|length=1404bp
ATGCCGGAGCTCCCCGAAGTTGCTGCCCTGGTCGCTGCCCTCGAAAATGA
AGCCAAAAGTAAGCGGTTGCTTCGAGTGTTGACCAAGGAAGCGGGCGGGG
GACCCCGGGATGGTTTGTACGACGACTTGGTGTTCAGTGGCACCGAGGAG
CAGGAAATGCACCGCGTGCTGGAAGGACGTGCCTTGACAGGCGTGGGTCG
GAAGGGGAAGCATCTGTGGATGGAGCTATCCTTGCTTCCCTCCCCCCCTT
CAACCTCCGCTGCATTCGGTGTTGGGAATGGGAGAAGAGGAGGAGATGAA
GGCGCCCGCAACACTTCTACCCTAACAACCTCTTCTGCTCCTCAAGAAGA
CAAGCGCTTCGTCCTCTTCCACATGGGAATGACAGGCTCCCTCCTATTCC
AGCACGTGGCCATCCCACAATACAGATCATTTTCCCTCGACGTCTCGAAA
GGCTGGCCACCCAAGTTCTGCAAGGCCCAATTTATCTTCGGTAATTGTGA
GGAAGGGAAGGATGACGAGGCAATTCAACTAGCGTTTTGCGACCAACGAC
GGTGGGGCCGCGTACAGCTTCTACCAGCTGGAGTGAAGGACCCTCGGATG
GAGGCCCCGCTCAAAGAATTAGCGCCGGATGCCTGGAAGGAACGACCTTC
ATTGCAAGTGTTCAGGGATAAGTTAAAAGAGACCGACATTGCCATTAAGG
CGGCCTTATTGGATCAGGGGAGGGTTTTGTCGGGATTGGGCAATTGGGTG
TGCGATGAGGTGCTGTTCCAGGCCAAGGTGGACCCGGCGCGAAGGTGCAA
GGCGCTGACGGAGGGGGACGTGAGGAGGGTGTGGGAGTCGGTGGACTACG
TGTGTGCGACGGCGTGTGCGGCTAATGCGCGGAGCGAAGGATTTCCTACT
GGTTGGTTATTCCATTATCGGTGGGCCAAGACCAAGAAGGACATGGCGGG
AGCTAAGGGTCCGGAGGGGAGAAGAATGGTGTTTGAGACAGTTGGAGGGA
GGACAACGGCGATTGTGCCTTCGGTGCAGCGGGTGAGAAGGGGGGGGGAT
GAGGAGAAGGAGATGGGAGAGCCAGGAGAGGATGGGGCTGGGGTAGGTAG
AGGAAAAAGAAAACAAAAGGAGGAGGAAGATGAATTTGAACAGATCATGA
CGAAGAAGAAGATAAGCAAGGGAAAGAGGTGTGTGAAGGAAGAGGTGATG
GAAGAGGAGGTTGGTATTGGGCGAGGAGACGAGAAGGCAGAATCGCCCTC
GATCATATCCGAACGGGCCATCAAGGTGATTAAGATGGAGAAAGATGTGA
AAATGAATATACCAGCATCCGAAAAGACGACGACACCACGACGCAGCAGT
CCACGTGTGAAGGCGGGCGAAGTCAAGACGAAAGGAAAGAGAGCAAAAAA
ATGA
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protein sequence of NO03G05500.1

>NO03G05500.1-protein ID=NO03G05500.1-protein|Name=NO03G05500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=468bp
MPELPEVAALVAALENEAKSKRLLRVLTKEAGGGPRDGLYDDLVFSGTEE
QEMHRVLEGRALTGVGRKGKHLWMELSLLPSPPSTSAAFGVGNGRRGGDE
GARNTSTLTTSSAPQEDKRFVLFHMGMTGSLLFQHVAIPQYRSFSLDVSK
GWPPKFCKAQFIFGNCEEGKDDEAIQLAFCDQRRWGRVQLLPAGVKDPRM
EAPLKELAPDAWKERPSLQVFRDKLKETDIAIKAALLDQGRVLSGLGNWV
CDEVLFQAKVDPARRCKALTEGDVRRVWESVDYVCATACAANARSEGFPT
GWLFHYRWAKTKKDMAGAKGPEGRRMVFETVGGRTTAIVPSVQRVRRGGD
EEKEMGEPGEDGAGVGRGKRKQKEEEDEFEQIMTKKKISKGKRCVKEEVM
EEEVGIGRGDEKAESPSIISERAIKVIKMEKDVKMNIPASEKTTTPRRSS
PRVKAGEVKTKGKRAKK*
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Synonyms
Publications