NO03G05450, NO03G05450 (gene) Nannochloropsis oceanica

Overview
NameNO03G05450
Unique NameNO03G05450
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2872
Alignment locationchr3:1558844..1561715 +

Link to JBrowse

Properties
Property NameValue
DescriptionTetratricopeptide repeat family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1558844..1561715 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
IPR001440TPR_1
IPR019734TPR_repeat
Homology
BLAST of NO03G05450 vs. NCBI_GenBank
Match: EWM30007.1 (tetratricopeptide repeat family protein [Nannochloropsis gaditana])

HSP 1 Score: 512.7 bits (1319), Expect = 1.300e-141
Identity = 270/377 (71.62%), Postives = 293/377 (77.72%), Query Frame = 0
Query:    2 LSSRRLLFLGALERFLNKGGRIGKVTVAGTGLVGE-------EALALGFQPTTP--AP---EDPSISPILNGDLQQTLPHLRALSLTPGGSASALVLNILGRLEHDAQNFKTAADLYTQALTLHPNSSSIFQNLGGAFASQGEHQLAFASFQRAIDLNVNDRYTYFKLGIMYEQLATGKFKEAAEHALSCYAFYVDGREGGRDTDALTIYGNLLLTRLCPEEAVAVYKRALALEEGLWNVWFNLANAYLKLGLKAEAIAALQRTLALNPKV-----------------------PTDTDPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFSEGALGPVTAEGSNEALTRALNKSMRILDLGCGT 344
            LS    L LGA+ERFLN+GGRIG+VTV   G  G         A ALGF+P  P  AP   +  +  P+L G L   LP L+ALS     S SAL+LN+LGRLEHDAQNFK A+DLYTQALTL PNSS+IFQNLG AFASQGEHQLAFASFQRAIDLN NDRYTYFKLG+MYEQLATGK+KEAAEHALSCYAFYVDGREGG DTDALTIYGNLL+ RLCP EAV VYKRALALE GLWNVWFN+ANAYLK+G K +AI ALQ+TL+LNP V                       P + DPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLF+EGA+GPVT EGS EAL RALNKSMRILDLGCGT
Sbjct:  177 LSPAHSLILGAMERFLNRGGRIGQVTVGDAGQEGRGLEPLQASATALGFRPIPPEGAPAKDKGQAGRPVLQGGLTDVLPELQALSRDTSASGSALLLNVLGRLEHDAQNFKAASDLYTQALTLQPNSSTIFQNLGAAFASQGEHQLAFASFQRAIDLNANDRYTYFKLGMMYEQLATGKYKEAAEHALSCYAFYVDGREGGEDTDALTIYGNLLVKRLCPAEAVEVYKRALALEAGLWNVWFNMANAYLKIGEKEDAIIALQQTLSLNPNVSAARHLLLSITGAQGGGEGGAAAPVEADPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFTEGAMGPVTPEGSGEALLRALNKSMRILDLGCGT 553          
BLAST of NO03G05450 vs. NCBI_GenBank
Match: CBJ25665.1 (Methyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 351.7 bits (901), Expect = 3.900e-93
Identity = 213/529 (40.26%), Postives = 299/529 (56.52%), Query Frame = 0
Query:   13 LERFLNKGGRIG--KVTVAGTGLVGEEALALGFQPTTPAPEDPSISPILNGDLQQTLPHLRALSLTPG---GSASALVLNILGRLEHDAQNFKTAADLYTQALTLHPNSSSIFQNLGGAFASQGEHQLAFASFQRAIDLNVNDRYTYFKLGIMYEQLATGKFKEAAEHALSCYAFYVDGREGGRDTDALTIYGNLLLTRLCPEEAVAVYKRALALEEGLWNVWFNLANAYLKLGLKAEAIAALQRTLALNPK-----------VPTDTDP---------AYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFSEGALGPVTAEGSNEALTRALNKSMRILDLGCGTGLCGAWFTDYSTRMVGVDLSPKMLAQAQKKLVYDELYDRDLREWVKEEATKSPAPTYDIIVSADVLQYLGSLEEVFLSTSLLLEPRRGLFAFTLEELQADYGQ-------AARDGGRAARGFTLGETGRFLHTRAYVERALAHAGLAVETAISYSPRVERGEPVPGFLYVVRR 510
            + RFLN G RI   +V +  +    +     GF  +  A  +  +  +L GD    L  ++A SLT G   G+  A+V+N++ RL HDA N + A D Y +AL L P  S +F+ LGGA+ SQG+HQ+AFAS+Q+AI+L   D   Y KLG++YE LA GK++EA +HA+ C+ +Y+    G  DTD LT  GNL + RL P  AV  Y+RALA+++ L NVWFNLANAYLKLG + EA   L+  L L+P               + DP         AY  ELFDYYAP YD HM++ LLYT PR+LR+ +++V N T  S            N  +   LN S+ ILDLGCGTGL G+WF DY+ ++VGVD+SP ML  A KK  Y EL   D+R ++      S    +D++V+A+ LQYLG LE V    S +L+P  G F+FT++  + + G+                 G++L   G + ++R Y+ER     G  +     +S  V+RGE  PG++ V R+
Sbjct:  220 INRFLNDGARISQLRVEIDDSPQSVDYYSRHGFIRSVEAASEGRV--LLAGDRVAALGAIQA-SLTGGDDQGTVGAVVMNLMARLLHDAGNLQGAVDAYLKALELDPTRSEVFRGLGGAYQSQGQHQMAFASYQQAINLAPWDLLAYLKLGMLYEDLAVGKYEEAGDHAIRCFQYYLQ-HSGSEDTDVLTRLGNLQVMRLDPGSAVETYRRALAVDKSLSNVWFNLANAYLKLGEEEEAATCLKEKLRLDPDPNAGVSARYLLASLEADPGRLTESDQLAYARELFDYYAPKYDDHMRKKLLYTGPRLLRKNMKEVYNATFQS---FPDEIQSAHNGDVLSYLNGSLDILDLGCGTGLIGSWFKDYARKLVGVDISPTMLDMATKKGCYHELRRGDVRAYL----AASEEQQFDLVVAAETLQYLGPLETVVADASKVLKP-GGYFSFTVDRRRTNEGEXXXXXXXXXXXXXXXXXGYSLKTDGTYAYSRGYLERLARLGGYEIVVLKRHSTMVQRGEAAPGYMGVFRK 736          
BLAST of NO03G05450 vs. NCBI_GenBank
Match: EZQ05893.1 (methyltransferase type 12 [Azospirillum brasilense])

HSP 1 Score: 155.6 bits (392), Expect = 4.100e-34
Identity = 126/399 (31.58%), Postives = 183/399 (45.86%), Query Frame = 0
Query:  111 TLHPNSSSIFQNLGGAFASQGEHQLAFASFQRAIDLNVNDRYTYFKLGIMYEQLATGKFKEAAEHALSCYAFYVDGREGGRDTDALTIYGNLLLTRLCPEEAVAVYKRALALEEGLWNVWFNLANAYLKLGLKAEAIAALQRTLALNPKVPTDTDPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFSEGALGPVTAEGSNEALTRALNKSMRILDLGCGTGLCGAWFTDYSTRMVGVDLSPKMLAQAQKKLVYDELYDRDLREWVKEEATKSPAPTYDIIVSADVLQYLGSLEEVFLSTSLLLEPRRGLFAFTLEELQADYGQAARDGGRAARGFTLGETGRFLHTRAYVERALAHAGLAVETAISYSPRVERGEPVPGFLYVVRR 510
            T  P+S++    L  A A+ G    A   ++ A+ L   DR    +L  +          EA +   +        R    D D     G   +    P +A+   +RA    EGL        ++  +LG  A  IAAL+           D   AYV  LFD YA  +DQ +   L Y+AP +LR+ V +           LGPV+  G+           +R+LDLGCGTGL G  F   +  + GVDL+P+M+ +A+ + +YDEL   D+       A ++    +D++V+ADVL YLG L  +F   +  L P  G FA T+E L         DG  A  G+TLG + R+ H+ AY+    A AGL V      SPR E+G  VPG L++V +
Sbjct:    9 TERPDSATARLGLARALAAAGRRDAALEEYREAVALRPGDREAALELAAL--------LVEAGDALGAVELLQPLSRRDPEDADLHAAIGRAWIALQEPVKALTALRRA----EGL--------DSDGRLGC-AALIAALEGGAG------EDLSAAYVRALFDRYADRFDQDLVGKLGYSAPALLREAVDR-----------LGPVSERGA---------PGLRVLDLGCGTGLAGVAFRPLAGHLAGVDLAPRMVEKARARALYDELSVGDV-----VAAVEAVPGAWDLLVAADVLVYLGDLTALFAGAAKALRP-AGRFAATVERL---------DGEAATSGYTLGPSRRYAHSEAYLREMAAAAGLTVLLMEPCSPRREKGVGVPGLLFIVEK 345          
BLAST of NO03G05450 vs. NCBI_GenBank
Match: WP_063634374.1 (methyltransferase domain-containing protein [Azospirillum humicireducens] >ANC91274.1 methyltransferase domain-containing protein [Azospirillum humicireducens])

HSP 1 Score: 152.9 bits (385), Expect = 2.700e-33
Identity = 130/414 (31.40%), Postives = 193/414 (46.62%), Query Frame = 0
Query:  106 YTQALTLHPNSSSIFQNLGGAFASQGEHQLAFASFQRAIDLNVNDRYTYFKLGIMYEQLATGKFKEAAEHALSCYAFYVDGREGGRD-TDALTIYGNLLLTRLCPEEAVAVYKRALALEEGLWNVWFNL--------ANAYLKLGLKAEAIAALQRTL-ALNPKVPTDTDPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFSEGALGPVTAEGSNEALTRALNKSMRILDLGCGTGLCGAWFTDYSTRMVGVDLSPKMLAQAQKKLVYDELYDRDLREWVKEEATKSPAPTYDIIVSADVLQYLGSLEEVFLSTSLLLEPRRGLFAFTLEELQADYGQAARDGGRAARGFTLGETGRFLHTRAYVERALAHAGLAVETAISYSPRVERGEPVPGFLYVVRR 510
            Y +A+ L P + +    L  A    GE   A A +  ++  +        +LG+ +   A+G+ +EA E      A   + R+      +ALT+ G+ L      +     ++   A+   L   W  L        A  + +   + E +A ++R + AL      D   AYV  LFD YA  +DQ +   L Y AP +LR  V + +           P TA              +RILDLGCGTGL G  F   +  + GVDLSP+M+ +A+++ +YD+L   D    V E   +SP   +D++V+ADVL Y+G L  VF + +L L  R G FA T+E L A+          +A  F LG T R+ H  AYV R+   AG AV      +PR E+G PV G L+V+ R
Sbjct:   73 YRRAVLLDPATWTWRLMLADALRQCGEIDAAHALY--SVLASERSDSAAVRLGLAHCLSASGRHEEALEEFREALALRPNDRDAALALAEALTMTGDALAAVELLQPLGRRHQDDAAVHHALGRCWLALREPAKAMSALRHARDAAEGEEVAPIERLIAALEAGAGADLSAAYVRALFDRYADRFDQDLVGRLGYAAPDLLRAAVDRAV-----------PGTA-------------GLRILDLGCGTGLAGVTFKPLAAHLAGVDLSPRMVEKARQRGLYDDLGVGD----VVEVMERSPG-GWDLLVAADVLVYIGDLAPVFAAAALALS-RGGHFAATVERLPAE----------SALEFALGATRRYAHAEAYVRRSAEEAGFAVCLMEPCTPRREKGLPVSGLLFVLER 444          
BLAST of NO03G05450 vs. NCBI_GenBank
Match: WP_012974031.1 (SAM-dependent methyltransferase [Azospirillum lipoferum] >BAI72052.1 methyltransferase [Azospirillum sp. B510])

HSP 1 Score: 152.5 bits (384), Expect = 3.500e-33
Identity = 132/419 (31.50%), Postives = 187/419 (44.63%), Query Frame = 0
Query:  103 ADLYTQALTLHPNSSSIFQNLGGAFASQGEHQLAFASFQRAIDLNVNDRYTYFKLGIMYEQLATGKFKEAAEHALSCYAFYVDGREGGRD-TDALTIYGNLLLTRLCPEEAVAVYKRALALEEGLWNVWFNLANAYLKLG--------LKAEAIAALQRTL-ALNPKVPTDTDPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFSEGALGPVTAEGSNEALTRALNKSMRILDLGCGTGLCGAWFTDYSTRMVGVDLSPKMLAQAQKKLVYDELYDRDLREWVKEEATKSPAPTYDIIVSADVLQYLGSLEEVFLSTSLLLEPRRGLFAFTLEELQADYGQAARDGGRAARGFTLGETGRFLHTRAYVERALAHAGLAVETAISYSPRVERGEPVPGFLYVVRRKR 512
            A  +  A+ L P + +    L  A    GE   A+A F RA+  + +D     +LG+     A G+ +EA E      A      E      +ALT  G+ L      +     ++ A ++   L   W  L      L          + +  AA+ R + AL      D   AYV  LFD YA  +DQ +   L Y AP +LR  V +++           P  A              +RILDLGCGTGL G  F   +  + GVDLSP+M+ +A+++ +YD+L   D+      EA +  A  +D++V+ADVL YLG L  VF + +  L P  G FA T+E L A          +A   F LG T R+ H  +YV      AG  V      +PR E+G PVPG L+VV R R
Sbjct:   70 AACFQHAVILDPGNWTWRLMLADALRQCGEIDAAYALF-RALAADRSDS-APARLGLARCLGALGRPEEALEEYREAVALRPSDSESVLALAEALTASGDALAAVELLQPLSRQFEEAASVHHALGRCWLALREPVKALAALRHARDIAEGDEAAAIDRLIAALEAGEGADLSAAYVRALFDRYADRFDQDLVGKLGYAAPDLLRSAVDRLM-----------PAAA-------------GLRILDLGCGTGLAGVSFRSLAAHLAGVDLSPRMVEKARQRALYDDLTVGDV-----VEAMERTAGGWDLLVAADVLVYLGDLVPVFAAAARAL-PVGGRFAATVERLPAG------PETQATESFVLGATRRYAHAESYVRETAEAAGFTVRLMEPCTPRREKGVPVPGLLFVVERGR 450          
BLAST of NO03G05450 vs. NCBI_GenBank
Match: WP_085120425.1 (methyltransferase domain-containing protein [Tistlia consotensis] >SME88115.1 Predicted methyltransferase, contains TPR repeat [Tistlia consotensis USBA 355] >SNR24474.1 Predicted methyltransferase, contains TPR repeat [Tistlia consotensis])

HSP 1 Score: 147.5 bits (371), Expect = 1.100e-31
Identity = 115/338 (34.02%), Postives = 153/338 (45.27%), Query Frame = 0
Query:  200 GNLLLTRLCPEEAVAVYKRALALEEGLWNVWFNLANAYLKLGLKAEAIAALQRTLALNP----------------KVPTDTDPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFSEGALGPVTAEGSNEALTRALNKSMRILDLGCGTGLCGAWFTDYSTRMVGVDLSPKMLAQAQKKLVYDELYDRDLREWVK------------EEATKSPAPTYDIIVSADVLQYLGSLEEVFLSTSLLLEPRRGLFAFTLEELQADYGQAARDGGRAARGFTLGETGRFLHTRAYVERALAHAGLAVETAISYSPRVERGEPVPGFLYVVRR 510
            G  LL    P  A    + AL +++G    WF LA A  K G +  A AA +R LAL P                  P     AY+  LFD YAP +++ +++ L Y AP +L + V                        A+T A     R+LDLGCGTGLCG  F + +  + GVDLSP ML  A+ + VYD L   +   ++             E A ++P   +D+IV+ADVL YLG L  +F + +  L P  GLFAFTLE          RD   A   F L  + R+ H  A V    A AG         S R+E G PVPG L ++RR
Sbjct:   15 GLTLLADGRPAAAAKAIEAALEIDDGYAEAWFALAEARAKAGHRRRAAAAYRRYLALQPDDALGAGLRLALLGAAAAPGRPPEAYLRRLFDQYAPRFERALRQRLGYDAPELLAEAV-----------------------AAVTPADAAPRRVLDLGCGTGLCGPLFRERAVWLEGVDLSPGMLGLARARKVYDALVAEEAERYLATVVRTGEAAGSGEGAARTP---FDLIVAADVLVYLGDLAPLFRAAASALRP-GGLFAFTLE----------RDESEA---FRLQPSQRYAHHPASVAALAAAAGFETLQLAPVSCRLEAGRPVPGLLVLLRR 312          
BLAST of NO03G05450 vs. NCBI_GenBank
Match: WP_085089354.1 (methyltransferase domain-containing protein [Azospirillum oryzae] >SMF75466.1 Predicted methyltransferase, contains TPR repeat [Azospirillum oryzae])

HSP 1 Score: 147.1 bits (370), Expect = 1.500e-31
Identity = 101/268 (37.69%), Postives = 138/268 (51.49%), Query Frame = 0
Query:  243 KAEAIAALQRTL-ALNPKVPTDTDPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFSEGALGPVTAEGSNEALTRALNKSMRILDLGCGTGLCGAWFTDYSTRMVGVDLSPKMLAQAQKKLVYDELYDRDLREWVKEEATKSPAPTYDIIVSADVLQYLGSLEEVFLSTSLLLEPRRGLFAFTLEELQADYGQAARDGGRAARGFTLGETGRFLHTRAYVERALAHAGLAVETAISYSPRVERGEPVPGFLYVVRR 510
            + +  AA++R + AL      D   +YV  LFD YA  +DQ +   L YTAP ILR  V +V      + GA G                  +RILDLGCGTGL G  F   ++R+ GVDLSP+M+ +A+++ +YDEL   D+      EA +     +D++V+ADVL Y+G L  VF + +  L P  G FA T+E L  D          A   F LG T R+ H+  YV      AGL +      SPR E+G PVPG L+V +R
Sbjct:  217 EGDEAAAIERLIAALEAGEGADLSASYVRALFDRYADRFDQDLVGKLGYTAPDILRSAVDRV------TPGAAG------------------LRILDLGCGTGLAGVAFKPLASRLAGVDLSPRMVEKARQRRLYDELTVGDV-----VEAMERAPGNWDLLVAADVLVYIGDLVPVFAAAARALPP-GGHFAATVERLPGD------PAAPAGATFALGATRRYAHSEQYVRATAEAAGLLIRLMEPCSPRREKGIPVPGLLFVAQR 448          
BLAST of NO03G05450 vs. NCBI_GenBank
Match: WP_059399423.1 (SAM-dependent methyltransferase [Azospirillum brasilense] >ALJ38068.1 methyltransferase (plasmid) [Azospirillum brasilense] >OPH14704.1 methyltransferase [Azospirillum brasilense] >OPH22762.1 methyltransferase [Azospirillum brasilense])

HSP 1 Score: 146.7 bits (369), Expect = 1.900e-31
Identity = 100/292 (34.25%), Postives = 148/292 (50.68%), Query Frame = 0
Query:  233 LANAYLKLGLKAEAIAALQRT---------------LALNPKVPTDTDPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFSEGALGPVTAEGSNEALTRALNKSMRILDLGCGTGLCGAWFTDYSTRMVGVDLSPKMLAQAQKKLVYDELYDRDLREWVKEEATKSPAPTYDIIVSADVLQYLGSLEEVFLSTSLLLEPRRGLFAFTLEELQADYGQAARDGGRAARGFTLGETGRFLHTRAYVERALAHAGLAVETAISYSPRVERGEPVPGFLYVVRR 510
            +  A++ L   A+A+ AL+R                 AL+     D   AYV  LFD YA  +DQ +   L Y+AP +LR+ V +           LGP +  G++          +R+LDLGCGTGL G  F   +  + GVDL+P+M+ +A+ + +YDEL   D+       A ++    +D++V+ADVL YLG+L  +F   +  L P  G FA T+E L         DG  AA G+ LG + R+ H+ AY+    A AGL V      SPR E+G  VPG L+++ +
Sbjct:  200 IGRAWIMLQEPAKALTALRRAEGLDSDGRLGCAALIAALDGGAGADLSAAYVRALFDRYADRFDQDLVGKLGYSAPALLREAVDR-----------LGPASDPGAS---------GLRVLDLGCGTGLAGVAFRPLAAHLAGVDLAPRMVEKARARALYDELSVGDV-----VAAVEAVPGAWDLLVAADVLVYLGNLTALFEGAAKALRP-EGRFAATVERL---------DGEAAASGYALGPSRRYAHSEAYLREMAAAAGLTVRLMEPCSPRREKGVGVPGLLFILEK 456          
BLAST of NO03G05450 vs. NCBI_GenBank
Match: WP_014247473.1 (SAM-dependent methyltransferase [Azospirillum lipoferum] >CBS86451.1 conserved protein of unknown function; Putative methyltransferase and TPR domains [Azospirillum lipoferum 4B])

HSP 1 Score: 146.0 bits (367), Expect = 3.300e-31
Identity = 131/420 (31.19%), Postives = 188/420 (44.76%), Query Frame = 0
Query:  100 KTAADLYTQALTLHPNSSSIFQNLGGAFASQGEHQLAFASFQRAIDLNVNDRYTYFKLGIMYEQLATGKFKEAAEHALSCYAFYVDGREGGRD-TDALTIYGNLLLTRLCPEEAVAVYKRALALEEGLWNVWFNL--------ANAYLKLGLKAEAIAALQRTL-ALNPKVPTDTDPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFSEGALGPVTAEGSNEALTRALNKSMRILDLGCGTGLCGAWFTDYSTRMVGVDLSPKMLAQAQKKLVYDELYDRDLREWVKEEATKSPAPTYDIIVSADVLQYLGSLEEVFLSTSLLLEPRRGLFAFTLEELQADYGQAARDGGRAARGFTLGETGRFLHTRAYVERALAHAGLAVETAISYSPRVERGEPVPGFLYVVRR 510
            +TAA  Y  A  L P + +    L  A    GE   A A +  ++           +LG+ +   A  +  EA E      A   + R+      +ALT+ G+ L      +     ++    +   L   W  L        A  + +   + +  A ++R + AL      D   AYV  LFD YA  +DQ +   L Y AP +LR  V +V+       GA G                  +RILDLGCGTGL G  F   +  + GVDLSP+M+ +A+++ +YDEL   D+      EA +     +D++V+ADVL Y+G L  VF + +  L P  G FA T+E L         DG  +A  F LG T R+ H  AYV R+   AG AV      +PR E+G PV G L+VV R
Sbjct:   68 RTAA-CYRHAAMLDPTNWTWRLMLADALRQCGETDAAHAIY--SVLAGERSDSAAVRLGLAHCLSARRRHDEALEEFREAVALRPNDRDAVLALAEALTVAGDALAAVELLQPLGRRHEDDATVHHALGRCWLALREPAKALSALRHARDAAEGDEAAPIERLIAALEAGEGADLSAAYVRALFDRYADRFDQDLVGKLGYAAPDLLRAAVDRVM------PGAAG------------------LRILDLGCGTGLAGVTFKPLAAHLAGVDLSPRMVEKARQRGLYDELGVGDV-----VEAMERAPGGWDLLVAADVLVYIGDLAPVFAAAARAL-PTGGRFAATVERL--------ADG--SAEEFCLGATRRYAHAEAYVRRSAEEAGFAVRLMEPCAPRREKGVPVAGLLFVVER 444          
BLAST of NO03G05450 vs. NCBI_GenBank
Match: AIB13813.1 (methyltransferase (plasmid) [Azospirillum brasilense])

HSP 1 Score: 146.0 bits (367), Expect = 3.300e-31
Identity = 101/292 (34.59%), Postives = 145/292 (49.66%), Query Frame = 0
Query:  233 LANAYLKLGLKAEAIAALQRT---------------LALNPKVPTDTDPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFSEGALGPVTAEGSNEALTRALNKSMRILDLGCGTGLCGAWFTDYSTRMVGVDLSPKMLAQAQKKLVYDELYDRDLREWVKEEATKSPAPTYDIIVSADVLQYLGSLEEVFLSTSLLLEPRRGLFAFTLEELQADYGQAARDGGRAARGFTLGETGRFLHTRAYVERALAHAGLAVETAISYSPRVERGEPVPGFLYVVRR 510
            +  A++ L    +A+ AL+R                 AL      D   AYV  LFD YA  +DQ +   L Y+AP +LR+ V +           LGPV+  G+           +R+LDLGCGTGL G  F   +  + GVDL+P+M+ +A+ + +YDEL   D+       A ++    +D++V+ADVL YLG L  +F   +  L P  G FA T+E L         DG  A  G+TLG + R+ H+ AY+    A AGL V      SPR E+G  VPG L++V +
Sbjct:  174 IGRAWIALQEPVKALTALRRAEGLDSDGRLGCAALIAALEGGAGEDLSAAYVRALFDRYADRFDQDLVGKLGYSAPALLREAVDR-----------LGPVSERGA---------PGLRVLDLGCGTGLAGVAFRPLAGHLAGVDLAPRMVEKARARALYDELSVGDV-----VAAVEAVPGAWDLLVAADVLVYLGDLTALFAGAAKALRP-AGRFAATVERL---------DGEAATSGYTLGPSRRYAHSEAYLREMAAAAGLTVLLMEPCSPRREKGVGVPGLLFIVEK 430          
The following BLAST results are available for this feature:
BLAST of NO03G05450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30007.11.300e-14171.62tetratricopeptide repeat family protein [Nannochlo... [more]
CBJ25665.13.900e-9340.26Methyltransferase [Ectocarpus siliculosus][more]
EZQ05893.14.100e-3431.58methyltransferase type 12 [Azospirillum brasilense... [more]
WP_063634374.12.700e-3331.40methyltransferase domain-containing protein [Azosp... [more]
WP_012974031.13.500e-3331.50SAM-dependent methyltransferase [Azospirillum lipo... [more]
WP_085120425.11.100e-3134.02methyltransferase domain-containing protein [Tistl... [more]
WP_085089354.11.500e-3137.69methyltransferase domain-containing protein [Azosp... [more]
WP_059399423.11.900e-3134.25SAM-dependent methyltransferase [Azospirillum bras... [more]
WP_014247473.13.300e-3131.19SAM-dependent methyltransferase [Azospirillum lipo... [more]
AIB13813.13.300e-3134.59methyltransferase (plasmid) [Azospirillum brasilen... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005328NSK005328Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05450.1NO03G05450.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100974g2gene638Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05450.1NO03G05450.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05450 ID=NO03G05450|Name=NO03G05450|organism=Nannochloropsis oceanica|type=gene|length=2872bp
ATGCTGTCTTCCCGCCGGCTCCTCTTTTTGGGGGCTTTGGAACGATTTTT
GAATAAAGGAGGACGAATCGGCAAGGTCACAGTGGCGGGAACAGGATTGG
TGGGAGAGGAGGCACTGGCCCTCGGGTTCCAACCCACAACTCCTGCGCCC
GAGGACCCCTCCATCTCCCCCATCCTCAATGGGGACCTCCAACAAACCCT
CCCCCACCTCCGTGCCCTCTCCCTCACCCCCGGCGGATCTGCCTCCGCCT
TGGTTCTCAACATACTCGGCCGTTTGGAGCACGATGCCCAAAACTTCAAG
ACGGCGGCCGACTTGTACACACAAGCCCTCACCCTACACCCCAACTCCTC
CTCAATCTTCCAAAATCTGGGGGGGGCCTTCGCGTCCCAAGGAGAGCACC
AACTGGCGTTTGCCTCCTTCCAACGTGCCATTGACTTAAACGTTAACGAC
CGTTACACGTATTTCAAACTGGGTATCATGTACGAGCAGCTGGCGACGGG
TAAATTCAAAGAGGCGGCGGAACATGCCTTGAGTTGCTATGCGTTTTATG
TGGATGGGAGGGAGGGAGGGAGGGACACCGACGCCTTGACCATCTACGGA
AATCTCCTGTTGACGCGCTTGTGTCCCGAGGAGGCTGTGGCGGTGTACAA
GCGGGCGTTGGCGCTGGAGGAGGGGCTGTGGAATGTGTGGTTTAATTTGG
CGAATGCCTACCTGAAGCTGGGGCTGAAGGCGGAGgtaggggggagggag
ggagggatggagggaaggaggggcgtttaattgtcttaaattatctaatt
cctctcgtcttcctcctcttattctcctttgtcgacgccacccttggatc
cctaccttccctctttccctcattccttctctccccccctccctcattcc
cttagGCCATCGCCGCCCTCCAGCGCACCTTGGCTCTTAATCCCAAGgtg
accgccgcgaggcacctcctcctctccatctccggggggggggcagggga
gaggaagggggagagggaggggtgcagGTACCCACGGATACAGACCCGGC
CTATGTAGTGGAGCTGTTTGACTACTACGCCCCTACCTATGACCAGCACA
TGAAGGAAGGgtgagcgatgcgatccctgcctctttttctcccttccccc
ctcctttcttccctccgtaaggctgtcttcgtctcctccttgcatgttgt
aaactgtgtctctaaccctccctccctccctccctccctctctccctcca
gACTCCTCTACACCGCCCCTCGCATCCTCCGACAAGAAGTGCGGAAGGTA
CTGAACCACACCCTCTTCTCTGAAGGAGCGCTGGGGCCAGTCACAGCGGA
AGGGAGCAACGAAGCTCTCACACGCGCGCTCAATAAAAGCATGCGAATCC
TTGACCTGGGCTGTGGCACGgtacatcccttgttttcctccctccctccc
tccctccctctctccctccttcgctttcctttatctgcgttcttggccat
ggcaggataccttcgctcaacctccctccctccctccctccctgcctccc
tgcctccctcagGGCCTGTGCGGCGCGTGGTTCACCGATTACTCTACCCG
GATGGTGGGGGTCGACCTCTCCCCCAAGATGCTAGCCCAGGCCCAGAAGA
AGCTTGTCTACGACGAGCTCTACGACCGCGACTTGCGCGAGTGGGTCAAG
GAAGAGGCTACCAAGAGgtacctacgtcttgccccccttccctccctccc
tcggttgtggtgctggtttgtcttgtggttgtacagatcggatcgggccg
tgggactcgttccaggtcaccaggtggaggagccgagaaacacccttcac
tcacacactcacaaatacacaaatgcattggtcatgtacaaatatgttta
tgtatcgcaaaaacaccaatacgtatatcatatttaaaaaaatgtatata
caagtacacatacatacaagtacacatatacacatatatatacatatata
tacatatatatacatatatatatatatatgtatgtatgcttacatataaa
catatgcacacattattataaacacgcgtatacacagCCCCGCCCCTACG
TACGACATAATCGTCTCCGCGGACGTCCTGCAATACCTGGGCTCGCTCGA
GGAGGTCTTCCTGTCCACTTCCCTCCTCCTCGAACCTCGCCGCGGTTTGT
TCGCCTTTACTCTGGAGGAGCTGCAGGCTGATTATGGGCAGGCAGCGAGG
GACGGAGGGAGGGCGGCCCGTGGATTCACGCTTGGAGAGACAGgtgggtg
ggtatggttgtgggtgaatgtggatgtggatggataggggtagatttggg
tgggtgtgggtgaatgtggatgtgaatattagatggatattgatgtgggt
gggtgtaagtgtgggttgatgtgggtgtgggtggtgcatgggtgggtgtg
gatgtgaatattagatggatattgatgcgggtggatgtgggtgtggatgc
ggggatgggtaggtcggctggtggatctacacaagtttccaggttttcgg
gtccatgggttcactccatacttgcctgtctctctgtctccttcattttc
ctctgacagtgtggccctcccattgatttgggatggacatatattcatcg
ctccctccctccattcctccttccctccttccctcctccctccctccctc
cctccctcctccagGTCGGTTCCTCCACACGAGGGCCTACGTGGAGCGAG
CCTTGGCTCATGCCGGGTTGGCGGTAGAAACGGCTATCAGTTACTCCCCG
CGCGTGGAGAGGGGGGAACCTGTCCCGGGGTTTCTGTACGTCGTGAGACG
GAAAAGGGACGGGTTGGTTTGA
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protein sequence of NO03G05450.1

>NO03G05450.1-protein ID=NO03G05450.1-protein|Name=NO03G05450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=516bp
MLSSRRLLFLGALERFLNKGGRIGKVTVAGTGLVGEEALALGFQPTTPAP
EDPSISPILNGDLQQTLPHLRALSLTPGGSASALVLNILGRLEHDAQNFK
TAADLYTQALTLHPNSSSIFQNLGGAFASQGEHQLAFASFQRAIDLNVND
RYTYFKLGIMYEQLATGKFKEAAEHALSCYAFYVDGREGGRDTDALTIYG
NLLLTRLCPEEAVAVYKRALALEEGLWNVWFNLANAYLKLGLKAEAIAAL
QRTLALNPKVPTDTDPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEV
RKVLNHTLFSEGALGPVTAEGSNEALTRALNKSMRILDLGCGTGLCGAWF
TDYSTRMVGVDLSPKMLAQAQKKLVYDELYDRDLREWVKEEATKSPAPTY
DIIVSADVLQYLGSLEEVFLSTSLLLEPRRGLFAFTLEELQADYGQAARD
GGRAARGFTLGETGRFLHTRAYVERALAHAGLAVETAISYSPRVERGEPV
PGFLYVVRRKRDGLV*
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Synonyms
Publications