NO03G05280, NO03G05280 (gene) Nannochloropsis oceanica

Overview
NameNO03G05280
Unique NameNO03G05280
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1732
Alignment locationchr3:1505674..1507405 +

Link to JBrowse

Properties
Property NameValue
DescriptionProtein of unknown function (DUF819)
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1505674..1507405 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008537DUF819
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO03G05280 vs. NCBI_GenBank
Match: EWM29967.1 (Protein of unknown function DUF819 [Nannochloropsis gaditana])

HSP 1 Score: 585.5 bits (1508), Expect = 1.600e-163
Identity = 338/474 (71.31%), Postives = 374/474 (78.90%), Query Frame = 0
Query:   25 VLPSGSYLPPANTLVTPMVPFYPTTTAITTLVLRRRAAPFP--SIATTNTVATRLAVATG-----TNGAIPFAATLTTGLHASPWWVWSMLLLASTAGVAAERSKVGAALSSPLITMAVALVVCNLGLLPAVAPAYATVNKFLVPLAIPLLLLDANLFKVLTQTGRLLRSFALGSIGTVLGTLVAAWLVPLRNLGVDGKEGWTIAAALASRHIGGAVNFVAVSETLATSAELTAAGIAADNLVVSFYFGLLFWLARRILPEXXXXXXXXXXXXXXXEKEEWVGRARVIEAADAPALGYLKALSLSCVLCMVGTWVGEGLLSGAISSLPIISLLSVTIATLFPRACASITEPAGHLAVILMNLFFSVTGAQGKLGKVLATAPRLFLFSAVQLFVHLAFLLGAGRGLFRLPFKELLIASNANVGGPTTAAAMAGSKKWKSLVLPGILTGILGYASATFIGLVLGRRVLAKMMMSSV 492
            ++ S +++PP   L+       P+    TT   +   AP P  +I+   + +T+   A G      +GAIPF ATL   +  SPWWVWSMLLLAST GVAAER+K+GAALSSPLITMAVALV CNLG LP+ APAY +VNKFLVPLAIPLLLLDANLFKVLTQTGRLLRSF LGSIGTVLGTL+AAW VPL +LG  GKEGW IAAALASRHIGGAVNFVAVSETL  SAELTAAGIAADNLVVSFYFGLLFWLAR + PE         XXXX     E V +A    A + P+LGYLKALSL+ +LCMVGTWV EGLL GAISS+P+ISLLSV  ATLFPRAC+S+TEPAGHLAVILMNLFFSVTGAQGKL +VL TAPRLFL SAVQL  HL FLLGAGRGL RLP KELL+ASNANVGGPTTAAAMAGSK+WKSLVLPGILTGILGYASATFIGL LGR VLAK++   V
Sbjct:   19 IMTSDAFVPPRPRLMPIEHLTGPSIARPTTYATKGGPAPLPFRAISDPASFSTKRLAAMGCTQHVASGAIPFTATLMASMQTSPWWVWSMLLLASTTGVAAERTKIGAALSSPLITMAVALVACNLGFLPSAAPAYTSVNKFLVPLAIPLLLLDANLFKVLTQTGRLLRSFVLGSIGTVLGTLIAAWFVPLGSLGAAGKEGWMIAAALASRHIGGAVNFVAVSETLGMSAELTAAGIAADNLVVSFYFGLLFWLARDLEPEDEVLHANGGXXXXPKGTREPVEQA-TWSATEPPSLGYLKALSLASLLCMVGTWVSEGLLQGAISSIPVISLLSVATATLFPRACSSVTEPAGHLAVILMNLFFSVTGAQGKLSQVLVTAPRLFLLSAVQLVFHLTFLLGAGRGLLRLPLKELLVASNANVGGPTTAAAMAGSKRWKSLVLPGILTGILGYASATFIGLALGRSVLAKIVTRGV 491          
BLAST of NO03G05280 vs. NCBI_GenBank
Match: CBN76833.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 308.1 bits (788), Expect = 4.800e-80
Identity = 185/410 (45.12%), Postives = 253/410 (61.71%), Query Frame = 0
Query:  102 WWVWSMLLLASTAGVAAERSKVGAALSSPLITMAVALVVCNLGLLPAVAPAYATVNKFLVPLAIPLLLLDANLFKVLTQTGRLLRSFALGSIGTVLGTLVAAWLVPLRNLGVDGKEGWTIAAALASRHIGGAVNFVAVSETLATSAELTAAGIAADNLVVSFYFGLLFWLARRILPEXXXXXXXXXXXXXXXEK-------------------EEWVGRARVIEAADAPALGYLKALSLSCVLCMVGTWVGEGLLSGAISSLPIISLLSVTIATLFPRACASITEPAGHLAVILMNLFFSVTGAQGKLGKVLATAPRLFLFSAVQLFVHLAFLLGAGRGLFRLPFKELLIASNANVGGPTTAAAMAGSKKWKSLVLPGILTGILGYASATFIGLVLGRRVLAKMMMSSVG 493
            W+VW++L+ +S+AG+ +ER++ GAA+SSPL+TM + + +CN+G++PA +PAY TVN+  VPLA+PLLL DA+L KVL   G LL  F +G+ GTV+GT  AA +VP   LG+ G +GW IA+ALA+RHIGGAVN+VAV ETL  SA+   AG+AADN+VVS YF  LFW+ +   P+                K                                                LC+ G  + +    G +S++P+++L++V  AT  P     +      L ++LM LFF+VTGAQG L  V+ TAP L +FS VQ+ VH   L+G GR LFRLPF+EL +ASNANVGGPTTAAAMA +K WK+LVLP +LTG+LGYA+ATFIG+ +G   L K +++  G
Sbjct:  160 WYVWAVLIASSSAGLWSERTRWGAAVSSPLVTMLLTITLCNVGVIPAASPAYDTVNQVFVPLAVPLLLFDADLQKVLRFAGTLLACFVIGAAGTVIGTAAAAAVVP---LGLGG-DGWKIASALAARHIGGAVNYVAVCETLGVSADAIVAGLAADNMVVSLYFIFLFWITK---PDRQEEPTPATTTRQGSTKAIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCLCGELLSKVAFGGRVSAIPLVTLVTVAGATAAPSWVGRLGSVGAQLGILLMQLFFAVTGAQGSLAVVMGTAPSLLVFSLVQIAVHFGVLVGVGR-LFRLPFRELALASNANVGGPTTAAAMAAAKGWKNLVLPALLTGVLGYATATFIGVGIGHAFL-KALVAGAG 560          
BLAST of NO03G05280 vs. NCBI_GenBank
Match: OEU10011.1 (DUF819-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 293.9 bits (751), Expect = 9.400e-76
Identity = 181/377 (48.01%), Postives = 252/377 (66.84%), Query Frame = 0
Query:  104 VWSMLLLASTAGVAAE-RSKVGAALSSPLITMAVALVVCNLGLLPAVAPAYATVNKFLVPLAIPLLLLDANLFKVLTQTGRLLRSFALGSIGTVLGTLVAAWLVPLRNLGVDGKEGWTIAAALASRHIGGAVNFVAVSETLATSAELTAAGIAADNLVVSFYFGLLFWLARRILPEXXXXXXXXXXXXXXXEKEEWVGRARVIEAADAPALGYLKALSLSCVLCMVGTWVGEGLLSGAISSLPIISLLSVTIATLFPRACASITEPAGHLAVILMNLFFSVTGAQGKLGKVLATAPRLFLFSAVQLFVHLAFLLGAGRGLFRLPFKELLIASNANVGGPTTAAAMAGSKKWKSLVLPGILTGILGYASATFIGLVLG 480
            V +++L  ST G + E R+ +G ALS+PL TMA+AL+  N+G++P  +P Y  VN+F VPLAIPLLL D++L +V+  TG LL +F +G+  TV  T++   ++PL++LG  G  GW +A ALA+RHIGGA+NFVAV+ETL    +  AA IAADN+VV+ YF  LF +A+   P+ XXXXX           E+  G+   I     P L    +LS++  L   GT++ + LL   +SSLP+IS L+V  AT FP+  +S++E    L VI + +FF+ +GA G +  VL  AP LF FSA+Q+ +H A L+  GRG+F+LP +EL +ASNANVGGPTTAAAMA +K+WK LVLP +L GILGY++AT + L LG
Sbjct:    1 VLTLILWLSTFGTSLERRTMIGKALSAPLATMAIALIFANIGIIPFQSPIYTIVNRFFVPLAIPLLLFDSDLKRVIKDTGTLLTAFGVGAFATVFATIITFPIIPLKSLG--GDVGWRVACALAARHIGGAINFVAVAETLNIGGDAVAAAIAADNVVVALYFAFLFSIAKADNPKDXXXXXAQQFTISEVAVED--GKPSSI---TLPTLAI--SLSVASSLVTAGTFLTKVLLPAGVSSLPLISTLTVIAATAFPKFFSSLSETGTALGVIFVQMFFACSGAAGSIRMVLEKAPSLFAFSALQIGIHFATLMAIGRGIFKLPKRELYLASNANVGGPTTAAAMAQAKEWKKLVLPALLIGILGYSTATALALGLG 368          
BLAST of NO03G05280 vs. NCBI_GenBank
Match: GAX15432.1 (hypothetical protein FisN_8Lh269 [Fistulifera solaris])

HSP 1 Score: 292.7 bits (748), Expect = 2.100e-75
Identity = 179/384 (46.61%), Postives = 244/384 (63.54%), Query Frame = 0
Query:   97 LHASPWWVWSMLLLASTAGVAAE-RSKVGAALSSPLITMAVALVVCNLGLLPAVAPAYATVNKFLVPLAIPLLLLDANLFKVLTQTGRLLRSFALGSIGTVLGTLVAAWLVPLRNLGVDGKEGWTIAAALASRHIGGAVNFVAVSETLATSAELTAAGIAADNLVVSFYFGLLFWLARRILPEXXXXXXXXXXXXXXXEKEEWVGRARVIEAADAPALGYLKALSLSCVLCMVGTWVGEGLLSGAISSLPIISLLSVTIATLFPRACASITEPAGHLAVILMNLFFSVTGAQGKLGKVLATAPRLFLFSAVQLFVHLAFLLGAGRGLFRLPFKELLIASNANVGGPTTAAAMAGSKKWKSLVLPGILTGILGYASATFIGLVLG 480
            LH+ P++  S +LL ST G++ E R+ VG ALS+PL TMA+AL V N+G++P  AP Y+ +NKF+VPLA+P+LL D++L +V+  TG LL +F +G++ TV  TLVA  LVP+ +L   G   W +A ALA+RHIGGA+NFVAV+ETL  +  + +A IAADN+VV+ YF +LF LA+  +P                + E  +  +    +++        ALS+S  L  +G    + LL    SSLP+ S L+V  AT+FP   A I      L ++ + +FF+V+GA G +  V   AP LF FS  Q+  H   L+G GRGL RL   EL +ASNANVGGPTTAAAMA +K+WK LVLP +LTGILGYA AT I L+LG
Sbjct:   67 LHSDPFFCLSAILLLSTFGISLERRTVVGKALSAPLATMALALFVANVGIVPFEAPIYSVINKFIVPLAVPMLLFDSDLRRVIRDTGSLLVAFGVGALATVAATLVAFPLVPMLSL---GDNNWRVACALAARHIGGAINFVAVAETLQIAGSVVSAAIAADNVVVALYFAMLFALAKETVP---LSKSEESIVQVQGDYEYSITDSSNSPSSEMDLPSVAMALSVSASLVTIGGLFTKLLLPKGTSSLPLTSALTVIAATIFPHFFARIRTAGTALGIVFIQMFFAVSGAAGSIRLVFQQAPALFAFSVAQVAAHFGILMGIGRGLLRLDANELYLASNANVGGPTTAAAMAQAKQWKRLVLPALLTGILGYAIATPIALMLG 444          
BLAST of NO03G05280 vs. NCBI_GenBank
Match: XP_008439290.1 (PREDICTED: uncharacterized membrane protein YjcL-like [Cucumis melo])

HSP 1 Score: 288.5 bits (737), Expect = 3.900e-74
Identity = 174/387 (44.96%), Postives = 247/387 (63.82%), Query Frame = 0
Query:  102 WWVWSMLLLASTAGVAAERSKVGAALSSPLITMAVALVVCNLGLLPAVAPAYATVNKFLVPLAIPLLLLDANLFKVLTQTGRLLRSFALGSIGTVLGTLVAAWLVPLRNLGVDGKEGWTIAAALASRHIGGAVNFVAVSETLATSAELTAAGIAADNLVVSFYFGLLFWLARRILPEXXXXXXXXXXXXXXXEKEEWVGRARVIEAADAPALGYLKALSLSCVLCMVGTWVGE--GLLSGAISSLPIISLLSVTIATLFPRACASITEPAGHLAVILMNLFFSVTGAQGKLGKVLATAPRLFLFSAVQLFVHLAFLLGAGRGLFRLPFKELLIASNANVGGPTTAAAMAGSKKWKSLVLPGILTGILGYASATFIGLVLGRRVLAKM 487
            W  W++L      G+ +E++K+G+ALS  L++  V L   N G++ + APA+ATV +FL+PLA+PLLL  A+L +V+  TG LL +F LGS+GT +GT+VA +LVP+R+LG D    W IAAAL  RHIGGAVN+VA+S+ L  S  + AAG+AADN++ + YF  LF LA ++ PE               EK+     A V  +   P L    A+++S  +C VG+++ +  G+  G   S+P I+ + V +AT+FP+  A +      +A+ILM +FF+V GA G +  V+ TAP +F+F+ VQ+ VHLA ++G G+ L R   K LLIASNANVGGPTTA  MA +K W S+V+PGIL GI G A ATF+G+  G  VL  M
Sbjct:   96 WGNWTVLFSIGAFGIWSEKTKIGSALSGALVSTLVGLAASNFGIIASDAPAFATVLEFLLPLAVPLLLFRADLRRVIKSTGTLLLAFLLGSVGTTVGTVVAYFLVPMRSLGQD---SWKIAAALMGRHIGGAVNYVAISDALGVSPSVLAAGLAADNVICAVYFATLFALASKVPPE-------STTLDNGVEKD-----AEVEPSNKLPVLQSASAIAVSFAICKVGSYLTKYFGIQGG---SMPAITAVIVVLATIFPKLFAYLAPSGEAMALILMQVFFAVVGASGNVWSVINTAPSIFIFAFVQISVHLAIIIGLGK-LLRFDLKSLLIASNANVGGPTTACGMATAKGWSSMVIPGILAGIFGIAIATFLGIGFGTMVLKYM 463          
BLAST of NO03G05280 vs. NCBI_GenBank
Match: XP_024396919.1 (uncharacterized protein LOC112292556 [Physcomitrella patens] >PNR38980.1 hypothetical protein PHYPA_019258 [Physcomitrella patens])

HSP 1 Score: 288.1 bits (736), Expect = 5.100e-74
Identity = 183/400 (45.75%), Postives = 249/400 (62.25%), Query Frame = 0
Query:   91 ATLTTGLHAS--PWWVWSMLLLASTAGVAAERSKVGAALSSPLITMAVALVVCNLGLLPAVAPAYATVNKFLVPLAIPLLLLDANLFKVLTQTGRLLRSFALGSIGTVLGTLVAAWLVPLRNLGVDGKEGWTIAAALASRHIGGAVNFVAVSETLATSAELTAAGIAADNLVVSFYFGLLFWLARRILPEXXXXXXXXXXXXXXXEKEEWVGRARVIEAADAPALGYLKALSLSCVLCMVGTWVGE--GLLSGAISSLPIISLLSVTIATLFPRACASITEPAGHLAVILMNLFFSVTGAQGKLGKVLATAPRLFLFSAVQLFVHLAFLLGAGRGLFRLPFKELLIASNANVGGPTTAAAMAGSKKWKSLVLPGILTGILGYASATFIGLVLGRRVLAKM 487
            A+L T L A+   W  W++LL A   G+ +E++K G+ALS  L++  V L   N+G++ + APAY  VNKFL+PLA+PLLL  A++ +VL  TGRLL  F +GS+ TVLGTL A  +VPL++LG D   GW I AAL SRHIGGAVN+VAV+E L  S  + AAG+AADNL+ + YF  LF LA +I PE                  E  G+ +V+E +         AL+LS  +C  G  V +  G   G+I+    I+ + VT+AT+FP    S+      +A ILM +FF+  GA G +  V+ TAP LF FS  Q+ VHL  ++G GR  F+   +E+L+ASNANVGGPTTA  MA +K W+SL++P IL GI G A ATF+G+ +G  VL+KM
Sbjct:   89 ASLATPLIAATDSWGTWTVLLAAGAFGLWSEKTKWGSALSGALVSTLVGLFASNVGIIASEAPAYVIVNKFLLPLAVPLLLFGADMRRVLGSTGRLLGIFCIGSVATVLGTLAAMVMVPLKSLGPD---GWKIGAALMSRHIGGAVNYVAVTEALGASPSIVAAGLAADNLICAVYFTTLFALASKIPPEQASTSGKVEGFV------EGRGQVQVLEGS--------IALALSATICTGGVAVAKHFGFQGGSIA---CITGIVVTLATMFPTWVGSLAPSGEGIANILMQIFFATVGANGSVRNVIETAPALFFFSLAQIAVHLGIVIGVGR-FFKFEMREILLASNANVGGPTTAGGMATAKGWRSLLVPSILIGIFGIAIATFLGIAIGYSVLSKM 467          
BLAST of NO03G05280 vs. NCBI_GenBank
Match: PSS33039.1 (Protein of unknown function DUF819 protein [Actinidia chinensis var. chinensis])

HSP 1 Score: 288.1 bits (736), Expect = 5.100e-74
Identity = 170/382 (44.50%), Postives = 241/382 (63.09%), Query Frame = 0
Query:  101 PWWVWSMLLLASTAGVAAERSKVGAALSSPLITMAVALVVCNLGLLPAVAPAYATVNKFLVPLAIPLLLLDANLFKVLTQTGRLLRSFALGSIGTVLGTLVAAWLVPLRNLGVDGKEGWTIAAALASRHIGGAVNFVAVSETLATSAELTAAGIAADNLVVSFYFGLLFWLARRILPEXXXXXXXXXXXXXXXEKEEWVGRARVIEAAD-APALGYLKALSLSCVLCMVGTWVGE--GLLSGAISSLPIISLLSVTIATLFPRACASITEPAGHLAVILMNLFFSVTGAQGKLGKVLATAPRLFLFSAVQLFVHLAFLLGAGRGLFRLPFKELLIASNANVGGPTTAAAMAGSKKWKSLVLPGILTGILGYASATFIGLVLG 480
            PW  W+ L      G+ +E++KVG+ LS  L+++ V L   NLG++ + APAY  V KFL+PLA+PLLL  A+L +V+  TG+LL +F +GS+ T +GT VA +LVP+R+LG D   GW IAAAL  RHIGGAVN+VA+SE L  S  + A+G+AADN++ + YF  LF LA +I PE                     G  + +E ++  P L    A+++S  +C +GT++ +  G+  G   SLP I+ + V +AT FPR    +      +A+ILM +FF+V G  G +  V+ TAP +F+F+ +Q+ VHLA +LG G+ L R+  + LL+ASNANVGGPTTA  MA +K W SLV+PGIL GI G A ATF+G+  G
Sbjct:   78 PWGTWTALFATGAFGIWSEKTKVGSTLSGALVSILVGLAASNLGIISSEAPAYGIVMKFLLPLAVPLLLFRADLRRVIRDTGKLLLAFLIGSVATTIGTAVAFFLVPMRSLGQD---GWKIAAALMGRHIGGAVNYVAISEALGVSPSVLASGLAADNVICAVYFTTLFALASKIPPESSASTNDD-------------GSNKELETSNKLPVLQTAMAIAVSFAICKIGTFLTKYFGIQGG---SLPAITAIVVILATAFPRQFGQLAPSGEAMALILMQVFFTVVGVSGNIRNVIYTAPSIFMFALIQISVHLAIILGVGK-LLRIDLRLLLLASNANVGGPTTACGMATAKGWTSLVIPGILAGIFGIAIATFLGIAFG 439          
BLAST of NO03G05280 vs. NCBI_GenBank
Match: GAQ88782.1 (hypothetical protein KFL_004590040 [Klebsormidium nitens])

HSP 1 Score: 287.7 bits (735), Expect = 6.700e-74
Identity = 192/435 (44.14%), Postives = 262/435 (60.23%), Query Frame = 0
Query:   58 RRRAAPFPSIATTNTVATRLAVATGTNGAIPFAATLTTGL---HASP------WWVWSMLLLASTAGVAAERSKVGAALSSPLITMAVALVVCNLGLLPAVAPAYATVNKFLVPLAIPLLLLDANLFKVLTQTGRLLRSFALGSIGTVLGTLVAAWLVPLRNLGVDGKEGWTIAAALASRHIGGAVNFVAVSETLATSAELTAAGIAADNLVVSFYFGLLFWLARRILPEXXXXXXXXXXXXXXXEKEEWVGRARVIEAADAPALGYLKALSLSCVLCMVGTWVGE----GLLSGAISSLPIISLLSVTIATLFPRACASITEPAGHLAVILMNLFFSVTGAQGKLGKVLATAPRLFLFSAVQLFVHLAFLLGAGRGLFRLPFKELLIASNANVGGPTTAAAMAGSKKWKSLVLPGILTGILGYASATFIGLVLG 480
            R   AP P +A  ++ AT  A           A +L T L    ASP      W VW+ LL A  AG+ +E++ +G ALS PL++  + L + NLG+LPA APAYA VNKFL+PLA+PLLL  A++ +V ++TGRL  +F LG+  TV G+  A  L PLR+LG D   GW +AAAL SRHIGGAVN+VAVSE L TS+ + AAG+AADNL+ + YF L+F LA  I P+                 EE      V+E +         AL+LS  +C VG+ + +     +L G I   P ++ + V +ATL P+   ++      LAVILM +FF+  GA G +  V+ TAP LF FSA+Q+ VHLA  LG G+ L     ++LL+ASNANVGGP+TAA MA +K W++ ++P IL GI GYA+ATF+ + +G
Sbjct:   74 RSHTAP-PCVAAVSSPATAAAPLASV------AVSLRTQLQQWQASPLVGNSEWAVWAFLLAAGAAGLWSEKTTLGQALSGPLVSTLIGLALSNLGVLPAAAPAYAVVNKFLLPLAVPLLLFSADIKRVFSETGRLWLAFLLGAAATVAGSFAALSLFPLRSLGED---GWKMAAALMSRHIGGAVNYVAVSEALQTSSSMVAAGLAADNLICALYFTLVFALAAGIPPDQPSAATSSPITSAALPPEEGKSTFTVLEGS--------TALALSAAICAVGSRLSKLPALRVLGGGI---PCMTAVVVALATLLPKQVGALAPAGEALAVILMQVFFATVGASGSVAYVVTTAPSLFAFSALQITVHLALTLGFGK-LLGFSRRDLLLASNANVGGPSTAAGMATAKGWRASLVPAILVGIFGYATATFLSIYVG 486          
BLAST of NO03G05280 vs. NCBI_GenBank
Match: XP_004140757.1 (PREDICTED: uncharacterized protein LOC101211894 [Cucumis sativus] >KGN57405.1 hypothetical protein Csa_3G183390 [Cucumis sativus])

HSP 1 Score: 287.3 bits (734), Expect = 8.800e-74
Identity = 173/388 (44.59%), Postives = 247/388 (63.66%), Query Frame = 0
Query:  102 WWVWSMLLLASTAGVAAERSKVGAALSSPLITMAVALVVCNLGLLPAVAPAYATVNKFLVPLAIPLLLLDANLFKVLTQTGRLLRSFALGSIGTVLGTLVAAWLVPLRNLGVDGKEGWTIAAALASRHIGGAVNFVAVSETLATSAELTAAGIAADNLVVSFYFGLLFWLARRILPEXXXXXXXXXXXXXXXEKEEWVGRARVIEAAD-APALGYLKALSLSCVLCMVGTWVGE--GLLSGAISSLPIISLLSVTIATLFPRACASITEPAGHLAVILMNLFFSVTGAQGKLGKVLATAPRLFLFSAVQLFVHLAFLLGAGRGLFRLPFKELLIASNANVGGPTTAAAMAGSKKWKSLVLPGILTGILGYASATFIGLVLGRRVLAKM 487
            W  W++L      G+ +E++KVG+ALS  L++  V L   N G++ + APA+A V +FL+PLA+PLLL  A+L +V+  TG LL +F LGS+GT +GT+VA +LVP+R+LG D    W IAAAL  RHIGGAVN+VA+S+ L  S  + AAG+AADN++ + YF  LF LA ++ PE                 +  VG+   +E ++  P L    A+++S  +C VG+++ +  G+  G   S+P I+ + V +AT+FP+  A +      +A+ILM +FF+V GA G +  V+ TAP +FLF+ VQ+ VHL  ++G G+ L R   K LLIASNANVGGPTTA  MA +K W S+V+PGIL GI G A ATF+G+  G  VL  M
Sbjct:   96 WGNWTVLFSIGAFGIWSEKTKVGSALSGALVSTLVGLAASNFGIIASDAPAFAIVLEFLLPLAVPLLLFRADLRRVIKSTGTLLLAFLLGSVGTTVGTVVAYFLVPMRSLGQD---SWKIAAALMGRHIGGAVNYVAISDALGVSPSVLAAGLAADNVICAVYFATLFALASKVPPEPTTL-------------DNGVGKDAEVEPSNKLPVLQSASAVAVSFAICKVGSYLTKYFGIQGG---SMPAITAVIVVLATIFPKLFAYLAPSGEAMALILMQVFFAVVGASGNVWSVINTAPSIFLFAFVQISVHLVIIIGLGK-LLRFDLKSLLIASNANVGGPTTACGMATAKGWSSMVIPGILAGIFGIAMATFLGIGFGMMVLKYM 463          
BLAST of NO03G05280 vs. NCBI_GenBank
Match: EFJ18129.1 (hypothetical protein SELMODRAFT_113569 [Selaginella moellendorffii])

HSP 1 Score: 287.0 bits (733), Expect = 1.100e-73
Identity = 182/390 (46.67%), Postives = 239/390 (61.28%), Query Frame = 0
Query:   98 HASPWWVWSMLLLASTAGVAAER-SKVGAALSSPLITMAVALVVCNLGLLPAVAPAYATVNKFLVPLAIPLLLLDANLFKVLTQTGRLLRSFALGSIGTVLGTLVAAWLVPLRNLGVDGKEGWTIAAALASRHIGGAVNFVAVSETLATSAELTAAGIAADNLVVSFYFGLLFWLARRILPEXXXXXXXXXXXXXXXEKEEWVGRARVIEAADAPALGYLKALSLSCVLCMVGTWVGEGLLSGAISSLPIISLLSVTIATLFPRACASITEPAGHLAVILMNLFFSVTGAQGKLGKVLATAPRLFLFSAVQLFVHLAFLLGAGRGLFRLPFKELLIASNANVGGPTTAAAMAGSKKWKSLVLPGILTGILGYASATFIGLVLGRRVLAKM 487
            H   W  WS+LL +   G+ +ER +K G+ALS  L++   AL   NLG+L   +  Y TVN FL+PLAIPLLL  A++ +VLT TGRLL  F LGS+ T++GTLVA  LVPL  LG D   GW IAAAL SRHIGGAVN+VAVSE L  S  + A+G+AADNL+ + YF  LF LA  I  E               EK E     +V+EA+         AL++S  +C  G W    ++     S+ +I+ L+V +AT+FP     +      LA++LM +FF+  GA G +  VLATAP LFLF  VQ+ VHL  +LG G+ L  +  + LL+ASNANVGGPTTAA MA +K W SL++PGIL GI G + ATF+ + LG  +L K+
Sbjct:   60 HLDAWKTWSVLLASGAFGLWSERNTKWGSALSGALVSTLFALFSSNLGILATESSVYGTVNAFLLPLAIPLLLFSADMKRVLTSTGRLLLVFLLGSVATIIGTLVAMKLVPLTGLGTD---GWKIAAALMSRHIGGAVNYVAVSEALGASPSVVASGLAADNLICAVYFTTLFALASSIPAEEKTGLENTTSPESKNEKAE----IKVLEAS--------FALAISAGVCSAGVWC-SNIIGYRSGSMAVITALAVILATMFPSRLGPLVSTGQGLALLLMQVFFATVGASGSIRSVLATAPSLFLFCVVQIGVHLLIVLGVGK-LLGVEKRLLLLASNANVGGPTTAAGMATAKGWTSLIVPGILAGIFGISIATFLSIALGITLLQKL 432          
The following BLAST results are available for this feature:
BLAST of NO03G05280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29967.11.600e-16371.31Protein of unknown function DUF819 [Nannochloropsi... [more]
CBN76833.14.800e-8045.12conserved unknown protein [Ectocarpus siliculosus][more]
OEU10011.19.400e-7648.01DUF819-domain-containing protein, partial [Fragila... [more]
GAX15432.12.100e-7546.61hypothetical protein FisN_8Lh269 [Fistulifera sola... [more]
XP_008439290.13.900e-7444.96PREDICTED: uncharacterized membrane protein YjcL-l... [more]
XP_024396919.15.100e-7445.75uncharacterized protein LOC112292556 [Physcomitrel... [more]
PSS33039.15.100e-7444.50Protein of unknown function DUF819 protein [Actini... [more]
GAQ88782.16.700e-7444.14hypothetical protein KFL_004590040 [Klebsormidium ... [more]
XP_004140757.18.800e-7444.59PREDICTED: uncharacterized protein LOC101211894 [C... [more]
EFJ18129.11.100e-7346.67hypothetical protein SELMODRAFT_113569 [Selaginell... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005343NSK005343Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05280.1NO03G05280.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|521593gene_1742Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100200g10gene673Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05280.1NO03G05280.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05280 ID=NO03G05280|Name=NO03G05280|organism=Nannochloropsis oceanica|type=gene|length=1732bp
CACCACAGACATCCTTAGACCGCGTTGGTCCGTCTTTTTCTTCTAAACAT
TGCCGTCGCTGCTGTAGCCAACACGTACTGCTACTTGCCGTTGCTGTATC
GCCACACTTCCCCCGCCATCTTTCTTCCTATTTCAGAAACATATGAGGCC
GCCGCTCATTCCTTGCCTCGGCATCGCCACCATCGCTAGCGTTATCTCGA
CGATAAGCGCCTTTGTCTTGCCATCAGGATCCTATCTCCCGCCTGCCAAC
ACGCTTGTCACGCCCATGGTGCCTTTCTACCCTACGACGACTGCCATCAC
TACCCTTGTCCTCCGTCGTCGAGCGGCGCCCTTCCCCTCTATTGCCACGA
CCAACACCGTCGCAACCCGCCTAGCAGTAGCCACGGGTACGAATGGTGCT
ATTCCATTCGCCGCGACCTTGACGACGGGCCTGCATGCCTCGCCGTGGTG
GGTTTGGTCGATGCTTCTCCTCGCGTCAACCGCCGGTGTGGCCGCCGAAC
GCTCTAAGGTTGGAGCCGCCCTTTCATCCCCTCTTATTACCATGGCCGTA
GCCCTCGTTGTGTGCAACCTCGGCCTTCTCCCCGCCGTTGCACCCGCCTA
CGCTACTGTCAATAAGTTTCTAGTTCCTTTAGCCATTCCTCTCCTCCTTC
TCGACGCCAACCTCTTTAAAGTCCTCACCCAAACCGGTCGCTTGCTCCGT
TCCTTCGCCCTCGGCAGCATTGGCACGGTCCTTGGGACGCTTGTGGCTGC
GTGGCTTGTGCCGTTGAGGAATTTAGGGGTGGATGGAAAGGAGGGATGGA
CGATTGCGGCAGCCTTGGCCTCAAGGCATATTGGAGGAGCTGTTAATTTT
GTGGCGGTTAGCGAGACGTTGGCGACCTCTGCTGAGCTCACCGCAGCAGG
CATCGCCGCGGATAATCTGGTGGTGTCGTTCTATTTTGGTTTGCTTTTCT
GGCTGGCCCGGCGTATTTTGCCGGAGGAGGAGGAGGAAGAGGGGCAGGGC
GGAGGGGTGGCAGGGGAAGGAGAGAAAGAGGAATGGGTTGGGCGAGCCAG
GGTAATAGAAGCAGCCGACGCTCCTGCCCTTGGGTATTTGAAGGCCCTCA
GCCTGTCGTGCGTCCTTTGTATGGTTGGCACGTGGGTTGGCGAAGGGCTG
CTGAGTGGAGCTATCTCGAGTTTGCCCATCATCTCCCTCCTGTCTGTCAC
CATTGCCACTCTATTCCCTCGAGCCTGCGCGAGCATCACGGAACCCGCAG
GCCATCTCGCTGTCATCCTCATGAATCTTTTCTTCTCCGTCACTGGTGCC
CAAGGAAAATTGGGCAAGGTCTTGGCGACGGCTCCCCGTCTTTTCCTCTT
CTCCGCTGTCCAACTTTTCGTTCACCTCGCTTTCCTCCTAGGGGCGGGCA
GAGGCCTCTTTCGCCTCCCTTTCAAGGAGCTGTTGATCGCATCGAACGCC
AACGTCGGGGGCCCAACAACAGCAGCAGCCATGGCGGGGAGTAAGAAGTG
GAAGAGTCTCGTGCTGCCAGGCATACTTACGGGTATCCTAGGGTACGCCT
CAGCGACGTTCATTGGCTTGGTCCTTGGGAGGAGGGTGCTAGCGAAGATG
ATGATGAGTAGCGTGGGAGGAAGTTGAGGTTGAGGGGAAGAGGTGGCGAC
GAAACGTTTTGGATTCGTACACTAATTAGAGAAAGTGAAGAGTGACAATT
TGGGAAAAGAGAAGGAAAAGTTGAATCGGGGG
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protein sequence of NO03G05280.1

>NO03G05280.1-protein ID=NO03G05280.1-protein|Name=NO03G05280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=495bp
MRPPLIPCLGIATIASVISTISAFVLPSGSYLPPANTLVTPMVPFYPTTT
AITTLVLRRRAAPFPSIATTNTVATRLAVATGTNGAIPFAATLTTGLHAS
PWWVWSMLLLASTAGVAAERSKVGAALSSPLITMAVALVVCNLGLLPAVA
PAYATVNKFLVPLAIPLLLLDANLFKVLTQTGRLLRSFALGSIGTVLGTL
VAAWLVPLRNLGVDGKEGWTIAAALASRHIGGAVNFVAVSETLATSAELT
AAGIAADNLVVSFYFGLLFWLARRILPEEEEEEGQGGGVAGEGEKEEWVG
RARVIEAADAPALGYLKALSLSCVLCMVGTWVGEGLLSGAISSLPIISLL
SVTIATLFPRACASITEPAGHLAVILMNLFFSVTGAQGKLGKVLATAPRL
FLFSAVQLFVHLAFLLGAGRGLFRLPFKELLIASNANVGGPTTAAAMAGS
KKWKSLVLPGILTGILGYASATFIGLVLGRRVLAKMMMSSVGGS*
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Synonyms
Publications