NO03G05060, NO03G05060 (gene) Nannochloropsis oceanica

Overview
NameNO03G05060
Unique NameNO03G05060
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2913
Alignment locationchr3:1432423..1435335 -

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Properties
Property NameValue
Descriptionchloride channel E
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1432423..1435335 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005247voltage-gated chloride channel activity
GO:0005247voltage-gated chloride channel activity
Vocabulary: Biological Process
TermDefinition
GO:0006821chloride transport
GO:0055085transmembrane transport
GO:1902476chloride transmembrane transport
GO:0055085transmembrane transport
GO:0006821chloride transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR014743Cl-channel_core
IPR000644CBS_dom
IPR001807Cl-channel_volt-gated
Homology
BLAST of NO03G05060 vs. NCBI_GenBank
Match: CBJ30998.1 (Chloride channel protein EriC [Ectocarpus siliculosus])

HSP 1 Score: 352.1 bits (902), Expect = 5.700e-93
Identity = 250/579 (43.18%), Postives = 334/579 (57.69%), Query Frame = 0
Query:  175 FLVQAALIGLATGLSIITFKTLISVMETYTYGSFLTSALNAFGSGKPLSLAMAAIPALGGVCVGVIRET--ARDFPPGLNGQIEDVDKQKPLDLKRALLKSLAAVATLGTGCSLGPEGPAVELGVVTSRVIT--SKVSVEQRKQLLLAGAAAGVAAGFNAPIAGVFFALEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVARVGLKEELALRPAAYLLSNPLVELPGYLGLGVLSGLVALSFRYLCGKFEELFAGKTRVPALNVMGKVPRFLKPVIGGALCGLTGILFPQVLFFGYETLDGLIANQ-SYPALLLVGLLGLKAVMTAICLASGLVGGLFAPSLFLGATAGAAYQKLL-------------------TFFLQ---------SSGLVATLIPIAGPPAYAMVGAASVLASMFRAPLTGSLLLFELTRDYDILLPLMASAGMGSLLVELVERKRTADEALVREETGRGAEGGQQGXXXXXXXXXXXXEEFEDQAAAVEVLGTLLPEGGREGGRGGSMTGAAEEGIILPGAGGGRGLIYNL--RVQEALAPPPVVLGSDTPLEEAL 719
            FL+ AAL+G+ TG ++  FKTLI  ++ ++Y       +     G   +   A IP LG + V  +      + + PGL G  E+VD+Q P   +R L K+LAAVATLGTG SLGPEGPAVELGV +SR ++  SK+SV++++ LL AGAAAGVAAGFNAPIAG+FFALEI                                 SAL+A++GL +EL+LRPA Y L +PL+ELP YLGLGV++GLVA+ F+Y   K  ++F G    P    M K P++ KP++  A+ G  G+ FPQVLFFGY+TLD L+AN  SY   LL  L   KA++TA  L SGLVGG FAPSLFLGATAGAAYQ++L                   TF L            G +++L+ IAG PAYAMVGAA+VL++++RAPLTGSLLLFELT+DYDI+LPLMA+AG+ SL+VE+  R   AD   V+                              +  ++E+       G +  G+   + G       + G GGGR  + +   +V +AL P  + L +DTPL EA+
Sbjct:  138 FLIMAALLGVITGTAVTIFKTLIGAVKKFSYDDL----IGRVPPGAASTCIGAFIPVLGAIGVVSLMWALQLKSYGPGLGGLTEEVDRQVPWRPRRTLGKTLAAVATLGTGNSLGPEGPAVELGVASSRWVSAMSKLSVQRQRMLLGAGAAAGVAAGFNAPIAGIFFALEI---------VKDTFNTNYNSKSFIAATLLCAVVSALMAKIGLHDELSLRPAEYNLESPLIELPLYLGLGVVAGLVAVMFKYFSRKSADVFKG--NFPGFGWMKKAPQWSKPIMMAAVTGTVGVFFPQVLFFGYDTLDKLLANTGSYSLPLLCFLCVAKALLTAGALGSGLVGGTFAPSLFLGATAGAAYQRILQGCLTAFRSTAGPSLDAASTFLLPVTSVLGLGGPGGDLSSLLTIAGSPAYAMVGAAAVLSALYRAPLTGSLLLFELTKDYDIVLPLMAAAGVSSLVVEVFSR---ADAPAVQP---------------------------MPRDMSLEI-------GLKISGKADKLMGK------IQGGGGGRESLESCTSKVTDALVPRILALTADTPLPEAM 658          
BLAST of NO03G05060 vs. NCBI_GenBank
Match: CEM31324.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 344.0 bits (881), Expect = 1.500e-90
Identity = 227/458 (49.56%), Postives = 284/458 (62.01%), Query Frame = 0
Query:  168 GLLPTTFFLVQAALIGLATGLSIITFKTLISVMETYTYGSF---LTSALNAFGSGKPLSLAMAAIPALGGVCVGVIRETARDFPPGLNGQIEDVDKQKPLDLKRALLKSLAAVATLGTGCSLGPEGPAVELGVVTSRVITS--KVSVEQRKQLLLAGAAAGVAAGFNAPIAGVFFALEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVARVGLKEELA-LRPAAYLLSNPLVELPGYLGLGVLSGLVALSFRYLCGKFEELFAGKTRVPALNVMGKVPRFLKPVIGGALCGLTGILFPQVLFFGYETLDGLIANQSYPALLLVGLLGLKAVMTAICLASGLVGGLFAPSLFLGATAGAAYQKLLTFFLQSSGLVATLIP----------IAGPPAYAMVGAASVLASMFRAPLTGSLLLFELTRDYDILLPLMASAGMGSLLVELVERKR 610
            G    + +L  A L G+ TGLS+  FK  I++++  TYG     +T +L   G       A   +PALGG+ VG++RE    F PGL G + +VD +K    ++ L KS A VATLGTGCSLGPEGPAVELGV  SR+++    +S+++R+QLL AGAAAGVAAGFNAP+AGVFFALEI                                 SAL AR+GL E LA + P +Y L NPLVELP Y+GLG +SG V++ F+      E  F G   V     M +VPR LKPVIGG LCG+ G  FPQVLF  Y TLD ++ + S PA  L+ LL LK VMTAI   SGLVGG FAPSLFLGA AGAAYQK+L    +    +A  +P          +A   AYA+VGAASVL++++RAPLTG+LLLFELT +YDI+LP  ASAG+GSLL EL +R R
Sbjct:  144 GFAAESAYLSTAILTGVLTGLSVTAFKRSINLVQGLTYGDLAKVVTPSLGILG-------AALLVPALGGLLVGILRELV-GFTPGLKGSLNEVDNRKNCAFQKQLAKSGAGVATLGTGCSLGPEGPAVELGVSCSRLVSQFFSMSLDRRRQLLSAGAAAGVAAGFNAPVAGVFFALEI---------VTAAKDNVGVPRTSIAGTVLCAVVSALTARIGLAETLAFVPPPSYSLLNPLVELPLYVGLGAVSGAVSILFKRALESAELAFEG--AVSRFKWMQRVPRILKPVIGGLLCGVVGFWFPQVLFSQYGTLDKVLTSASDPASSLILLLFLKMVMTAISAGSGLVGGTFAPSLFLGAVAGAAYQKVLAPATEQVVGLAAGLPLFQSVLGGEGVAPAGAYALVGAASVLSAVYRAPLTGTLLLFELTHNYDIVLPAGASAGLGSLLAELADRPR 582          
BLAST of NO03G05060 vs. NCBI_GenBank
Match: XP_005707536.1 (chloride channel/carrier, CIC family [Galdieria sulphuraria] >EME31016.1 chloride channel/carrier, CIC family [Galdieria sulphuraria])

HSP 1 Score: 315.8 bits (808), Expect = 4.500e-82
Identity = 206/454 (45.37%), Postives = 268/454 (59.03%), Query Frame = 0
Query:  169 LLPTTFFLVQAALIGLATGLSIITFKTLISVMETYTYGS-FLTSALNAFGSGKPLSLAMAAIPALGGVCVGVIRETARDFPPGLNGQIEDVDKQKPLDLKRALLKSLAAVATLGTGCSLGPEGPAVELGVVTSRVITSKVSVEQRKQL--LLAGAAAGVAAGFNAPIAGVFFALEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVARVGLKEELALRPAAYLLSNPLVELPGYLGLGVLSGLVALSFRYLCGKFEELFAGKTRVPALNVMGKVPRFLKPVIGGALCGLTGILFPQVLFFGYETLDGLIANQSYPALLLVGLLGLKAVMTAICLASGLVGGLFAPSLFLGATAGAAYQKLL-------------TFFLQSSGLVATLIPIAGPPAYAMVGAASVLASMFRAPLTGSLLLFELTRDYDILLPLMASAGMGSLLVELVE 607
            L P +  L+ AAL+G+  G  +  FKTLI ++  ++YG  F  + L  FG        +  IP LGG  V ++R   ++   GLN  IE V + KP++L R   K+ AAV TLGTGCSLGPEGP+VE+G   SR+ ++   +   KQL  L  GAAAG AAGFNAPIAGVFFALEI                                 SALV++ GL    A     Y + +P+VELP YL LG+L+G+ +L  +Y        F GK  +     M  VP   KP +GG L GL  + FPQ+LFFGY+TLD L+A+  +P  LL  LL LK ++T++ L SGLVGG FAP+LF+GAT GA Y KLL             +F    S  +++++ IAGPPAY+MVG A+VL+ +FRAPLT SLLLFELTRDY I+LPLMAS+G+ S LVE VE
Sbjct:   96 LPPDSSLLLLAALVGIGGGAGVTLFKTLIRLVSEWSYGDHFAGNLLYLFG-----RYNIIFIPTLGGFLVSLLRSRKQELGGGLNEIIEQVKQGKPVNLSRLFFKNAAAVVTLGTGCSLGPEGPSVEIGAAVSRLFSNWFRLSSEKQLWVLATGAAAGFAAGFNAPIAGVFFALEI-----VLGSSVIRNGLDATGNSTVAMLLLSSALSALVSQAGLGSSPAFSLPKYEILSPIVELPLYLLLGLLAGVASLGLKYSLQWGSNFFQGKLSIS--EWMKAVPTVTKPFLGGLLNGLIALFFPQILFFGYDTLDALLADSDFPLQLLFTLLFLKPIVTSLSLGSGLVGGTFAPTLFVGATLGACYAKLLAQIDYGILHVMNQSFGSWLSSGMSSILLIAGPPAYSMVGMAAVLSGVFRAPLTSSLLLFELTRDYRIVLPLMASSGLSSWLVETVE 537          
BLAST of NO03G05060 vs. NCBI_GenBank
Match: EWM29943.1 (cl- channel voltage-gated family protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 314.7 bits (805), Expect = 1.000e-81
Identity = 167/187 (89.30%), Postives = 180/187 (96.26%), Query Frame = 0
Query:  155 LTRIVGKLEKADIGLLPTTFFLVQAALIGLATGLSIITFKTLISVMETYTYGSFLTSALNAFGSGKPLSLAMAAIPALGGVCVGVIRETARDFPPGLNGQIEDVDKQKPLDLKRALLKSLAAVATLGTGCSLGPEGPAVELGVVTSRVITSKVSVEQRKQLLLAGAAAGVAAGFNAPIAGVFFALEI 342
            LTR+V KLE+ADIGL+PTT FL+QAALIGLATGLSIITFKTLISVMETYTYG+FLTSALNAFGSGKPLSLAMAAIPALGGVCVGVIRE AR+FPPGL+GQ E+VDKQKPLD+KRA+LKSLAAVATLGTGCSLGPEGPAVELGVV SR++T K S+EQRKQLLLAGAAAGVAAGFNAPIAGVFFALEI
Sbjct:  144 LTRLVEKLEEADIGLVPTTAFLMQAALIGLATGLSIITFKTLISVMETYTYGNFLTSALNAFGSGKPLSLAMAAIPALGGVCVGVIREAAREFPPGLSGQAEEVDKQKPLDVKRAVLKSLAAVATLGTGCSLGPEGPAVELGVVASRLVTLKASLEQRKQLLLAGAAAGVAAGFNAPIAGVFFALEI 330          
BLAST of NO03G05060 vs. NCBI_GenBank
Match: XP_002183492.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45192.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 313.2 bits (801), Expect = 2.900e-81
Identity = 214/485 (44.12%), Postives = 271/485 (55.88%), Query Frame = 0
Query:  172 TTFFLVQAALIGLATGLSIITFKTLISVMETYTYG-SFLTSALNAFGSGKPLSLAMAAIPALGGVCVGVIRETARD-FPPGLNGQIEDVDKQKPLDLK-----------RALLKSLAAVATLGTGCSLGPEGPAVELGVVTSR-------VITSKVSVEQRKQLLLAGAAAGVAAGFNAPIAGVFFALEI--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVARVGLKEELALRPAAYLLSNPLVELPGYLGLGVLSGLVALSFRYLCGKFEELFAGKTRVPAL-NVMGKVPRFLKPVIGGALCGLTGILFPQVLFFGYETLDGLIANQSYPALLLVGLLGLKAVMTAICLASGLVGGLFAPSLFLGATAGAAYQKLLTFFLQS-------------SGLVATLIPIAGPPAYAMVGAASVLASMFRAPLTGSLLLFELTRDYDILLPLMASAGMGSLLVELVERK 609
            + F+L +AAL+G+ATG+S+  FK  I  +    Y  SFL            L    + +PA+GGV VG++    R  FPPGL G ++ VD+Q    L              L KS AAV TLGTGCSLGPEGP VE+G+  +R          S+        LL  GAAAGVAAGFNAP+AGVFF LE+                                               SALVAR  L + L L  + Y L  PL+ELP YL LGV+SG VA SF       +  F+G+    ++ + M  +P  +KPVIGG  CGL G++FPQ+LFFGYETL+ L+AN S P  LL  LL +K +MTA+   SGLVGG FAPSLFLGA  GAA+  + T   Q+             S   A ++ +A  PAYAMVGAASVLA++FRAPLT SLLLFELTRDYD++LPLMASAG+GSL+ +++E K
Sbjct:  125 SAFYLAEAALVGVATGISVAVFKLSIEFIREVCYNQSFLY-----------LPAVRSVVPAVGGVAVGILYWAGRGAFPPGLRGTVQLVDQQDRRGLTVDTTQKVKTQIDFLRKSTAAVFTLGTGCSLGPEGPCVEIGMNVARGCMDVKPEFLSRPRPHWNVCLLNCGAAAGVAAGFNAPLAGVFFTLEVMQSALNGVRQEEQEKQTLQGNNSDLNAASNAVSATENITPILLASVLSALVARTILGDTLVLSLSEYSLETPLIELPLYLLLGVISGFVAFSFSKAANWSQAFFSGEVGGESIQSFMSCLPEPVKPVIGGFACGLVGLVFPQILFFGYETLNSLLANASLPTSLLFSLLIVKTIMTAVSAGSGLVGGTFAPSLFLGAMVGAAFHNVATIVFQTLMTSFPWESVGVLSSTAAPVLVLADVPAYAMVGAASVLAALFRAPLTASLLLFELTRDYDVILPLMASAGVGSLVGDILEDK 598          
BLAST of NO03G05060 vs. NCBI_GenBank
Match: XP_002177841.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50655.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 297.7 bits (761), Expect = 1.300e-76
Identity = 206/465 (44.30%), Postives = 264/465 (56.77%), Query Frame = 0
Query:  171 PTTFFLVQAALIGLATGLSIITFKTLISVMETYTYGSFLTSALNAFGSGKPLSLAMAAIPALGGVCVGVIRETARDFPPGLNGQIEDVDKQKPLDLK----------RALLKSLAAVATLGTGCSLGPEGPAVELGVVTSRV---ITSKVSVEQR---KQLLLAGAAAGVAAGFNAPIAGVFFALEI------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVARVGLKEELALR-PAAYLLSNPLVELPGYLGLGVLSGLVALSFRYLCGKFEELFAGKTRVP--ALNVMGKVPRFLKPVIGGALCGLTGILFPQVLFFGYETLDGLIANQSYPALLLVGLLGLKAVMTAICLASGLVGGLFAPSLFLGATAGAAYQKLLTFFLQSS-GLVATLIP-IAGPPAYAMVGAASVLASMFRAPLTGSLLLFELTRDYDILLPLMASAGMGSLLVELVERK 609
            PT + L QA ++G+ TG S+  FK  I+ +++  Y          F    P  + M  +PA+GG  VGV+     DFPPGL G + +VDK+    ++          R L KS AA  TLGTGCSLGPEGP VE+G+  +R    I+ + +  QR   + LL  GAAAGV+AGFNAPIAG FFALEI                                       SAL AR  L + L L    +Y L  PL+ELP Y+ LG++SG V+ +F       + +F G        + V    P F KPVIGG LCGL GI FPQ+LFFGY+ L+ L+AN S P  LL+ LL  K  +TAI   SGLVGG FAPSLFLGA  GAA+  +++  L    GL A   P +A  PAYAMVGA SVLA++FRAPLT  LLLFE+TRDYD++LPLMASAG GS+  ++++ K
Sbjct:  111 PTAYDLFQAGIVGIFTGFSVALFKLSINAVKSLCYRQI-------FFQTNP--VLMVTVPAMGGAAVGVLM-LLGDFPPGLRGTVIEVDKESQGTVQKLRDRVQTQFRFLRKSAAATVTLGTGCSLGPEGPCVEIGMDVARSCMDISRRTAERQRLWNRMLLSCGAAAGVSAGFNAPIAGTFFALEIMHRMFSSIDGEENADKDASAGLSSLNTATIAPVLIASVMSALCARTLLGDHLVLALGGSYSLKKPLIELPLYMVLGLVSGTVSFAFSRAANLSQAVFVGDYGSDRFRMGVRSLSPAF-KPVIGGILCGLVGIKFPQILFFGYDCLNPLLANNSLPTPLLLSLLAAKISITAISAGSGLVGGTFAPSLFLGAVTGAAFHNIVSSILYCGLGLSAASGPLLADVPAYAMVGAGSVLAALFRAPLTACLLLFEVTRDYDVILPLMASAGFGSVFADVLDGK 564          
BLAST of NO03G05060 vs. NCBI_GenBank
Match: XP_005536888.1 (probable CLC-type chloride channel [Cyanidioschyzon merolae strain 10D] >BAM80852.1 probable CLC-type chloride channel [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 297.4 bits (760), Expect = 1.700e-76
Identity = 198/464 (42.67%), Postives = 261/464 (56.25%), Query Frame = 0
Query:  161 KLEKADIGLLPTTFFLVQAALIGLATGLSIITFKTLISVMETYTYGSFLTSALNAFGSGKPLSLAMAAIPALGGVCVGVIRETARDFPPGLNGQIEDVDKQKPLDLKRALLKSLAAVATLGTGCSLGPEGPAVELGVVTSRVITS--------KVSVEQRKQLLLAGAAAGVAAGFNAPIAGVFFALEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVARVGLKEELALRPAAYLLSNPLVELPGYLGLGVLSGLVALSFRYLCGKFEELFAGKTRVPALNVMGKVPRFLKPVIGGALCGLTGILFPQVLFFGYETLDGLIANQSYPALLLVGLLGLKAVMTAICLASGLVGGLFAPSLFLGATAGAAYQK--------LLTFFLQSSGLVATL-----IPIAGPPAYAMVGAASVLASMFRAPLTGSLLLFELTRDYDILLPLMASAGMGSLLVE 604
            +L+  D G+L     LV AAL+G  TGL +  FKT I  +  + YG  +  AL  F      SL + A+P +GG CV  ++        G+   +  ++K +      A++K++AAV TLG+GCSLGPEGP+VE+G   +R+I          ++S E+ +QL   G AAGVAAGFNAP AGV FA EI                                 S+LVAR+GL E  A     Y L NPL+ELP YLGLG L+GL +L FR      + L  G+        + ++P   +P+ GG L G+ G +FPQ+LFFGY+ LD L+A+ ++   LL GLL LK +MTA  L SGLVGG FAP+LF+GA  GA Y K        LL    ++ G          IPIAGPPAYAMVG A+VLA MFRAPLTG LLLFE+TRDY I+LPLMA  G+ + + +
Sbjct:   72 RLQSPDSGVL-----LVLAALVGAGTGLGVTLFKTAIRGVSDFGYGDTVAGALLPFVG----SLNLIAVPTMGGACVSFLKLRFGALDGGIEAMLRSMEKNERFQSAGAIVKAIAAVFTLGSGCSLGPEGPSVEIGASVARLIPQWASERLQWRLSSERLRQLFACGCAAGVAAGFNAPFAGVLFANEI------AQRAGGNHTESGTGASTTPALLVASALSSLVARLGLGERPAFSIPNYDLRNPLLELPLYLGLGFLAGLASLGFR------KALLLGQNLYQCTG-LRRIPVAWRPLCGGLLNGMVGFVFPQILFFGYDMLDALLADTNFSIPLLAGLLFLKPLMTAASLGSGLVGGTFAPALFVGANLGALYCKSIECAGNALLAIVFKTLGATTATALSGSIPIAGPPAYAMVGMAAVLAGMFRAPLTGCLLLFEMTRDYRIILPLMAGVGVSTWIAD 513          
BLAST of NO03G05060 vs. NCBI_GenBank
Match: WP_007355298.1 (MULTISPECIES: chloride channel protein [Kamptonema] >CBN56085.1 Cl-channel, voltage-gated family protein (fragment) [[Oscillatoria] sp. PCC 6506])

HSP 1 Score: 283.9 bits (725), Expect = 1.900e-72
Identity = 190/462 (41.13%), Postives = 262/462 (56.71%), Query Frame = 0
Query:  151 RLAILTRIVGKLEKADIGLLPTTFFLVQAALIGLATGLSIITFKTLISVMETYTYGSFLTSALNAFGSGKPLSLAMAAIPALGGVCVGVIRETARDFPPGLNGQIEDVDKQKPLDLKRALLKSLAAVATLGTGCSLGPEGPAVELGVVTSRVITSKVSVEQRKQLLL--AGAAAGVAAGFNAPIAGVFFALEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVARVGLKEELALRPAAYLLSNPLVELPGYLGLGVLSGLVALSFRYLCGKFEELFAGKTRVPALNVMGKVPRFLKPVIGGALCGLTGILFPQVLFFGYETLDGLIANQSYPALLLVGLLGLKAVMTAICLASGLVGGLFAPSLFLGATAGAAYQKLLTFFLQSSGLVATLIPIAGPPAYAMVGAASVLASMFRAPLTGSLLLFELTRDYDILLPLMASAGMGSLLVELVERKRT 611
            R + LTR + +L  +     P T  L+ + LIG  TG  ++TF  LI ++ +     F    +   G G P   A+A IP LGGV +G++R   RDF P ++  I      + L   + + K +AA  +LGTG SLGPE P+VE+G     ++   + + Q +Q LL  AGAAAG+AAGFNAPIAGVFFALE+                                 SA++A++ L  + A     Y + +PL ELP Y+GLG+L+  V+L++       E  F GK  +P    + K+PR + P+IGGA  GL  +  PQ+L  GYET++ ++ +  +   LL+ LLG K  MTA+ L SGLVGG+FAP++FLGA+ G+AY   L      SG       +AGPPAYAMVG A+VLA   RAPLT  LL+FELTRDY I+LPLMA+ G+   LVELV R+ T
Sbjct:   20 RASRLTRFLNRLHPS-----PETLLLILSLLIGGVTGAGVVTFHYLIHLIHSLMMEDF----MGVIGGGSP--WALACIPILGGVAIGLMRWWFRDFGPNMSSLIAASQGLQELSPLKPIAKMVAASVSLGTGASLGPEAPSVEIGANFGMLLAQVLQLSQERQRLLLGAGAAAGLAAGFNAPIAGVFFALEV-------------VLGSTFATSSVSVVLLAAVVSAVIAQISLGAQPAFALPVYEVRSPL-ELPLYMGLGLLASCVSLAYTEAIQLAERCFQGK--IPGFAWLAKLPRPIHPIIGGACVGLVALQLPQILGVGYETVEAMLQDVKFSLPLLLLLLGAKLGMTAVSLGSGLVGGIFAPAMFLGASLGSAYGIFLAMLPAMSG------HVAGPPAYAMVGMAAVLAGSARAPLTSILLMFELTRDYRIVLPLMAAVGLSVWLVELVNRRST 448          
BLAST of NO03G05060 vs. NCBI_GenBank
Match: WP_017287036.1 (CBS domain-containing protein [Leptolyngbya boryana] >BAS58310.1 Cl- channel voltage-gated family protein [Leptolyngbya boryana IAM M-101] >BAS64658.1 Cl- channel voltage-gated family protein [Leptolyngbya boryana dg5] >BAY55478.1 chloride channel protein [Leptolyngbya boryana NIES-2135])

HSP 1 Score: 280.4 bits (716), Expect = 2.100e-71
Identity = 182/439 (41.46%), Postives = 263/439 (59.91%), Query Frame = 0
Query:  171 PTTFFLVQAALIGLATGLSIITFKTLISVMETYTYGSFLTSALNAFGSGKPLSLAMAAIPALGGVCVGVIRETARDFPPGLNGQIEDVDKQKPLDLKRALLKSLAAVATLGTGCSLGPEGPAVELGVVTSRVI--TSKVSVEQRKQLLLAGAAAGVAAGFNAPIAGVFFALEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVARVGLKEELALRPAAYLLSNPLVELPGYLGLGVLSGLVALSFRYLCGKFEELFAGKTRVPALNVMGKVPRFLKPVIGGALCGLTGILFPQVLFFGYETLDGLIANQSYPALLLVGLLGLKAVMTAICLASGLVGGLFAPSLFLGATAGAAYQKLLTF-FLQSSGLVATLIPIAGPPAYAMVGAASVLASMFRAPLTGSLLLFELTRDYDILLPLMASAGMGSLLVELVE 607
            P T  L+ A +IG   GL ++ F+ LI +    T    L   +  FG     +  +A +P LGG+ VG++R   ++F PG++G I  V   K +   R ++K++AA  +LGTG SLGPEGP+VE+G     ++  + KVS ++++ LL AGAAAG+AAGFNAPIAGVFFALE+                                 SAL+A++GL  + A    AY + +PL ELP YLGLG+ + +V++++        ++F GK  +P    M K+PR  +P++GG   GL  +  PQ+L  GY+T++ ++ +  +  LLL+ LL +K +MTA+ L SGL+GG+FAP++FLGAT GAAY K+L F F   +G       IA PPAYAMVG A+VLA+   APLT  LLLFE+TRDY I+LPLMA+ G+   L  L++
Sbjct:   33 PDTIVLLLAVVIGGGAGLGVLMFRYLIELFHRLTLED-LMGTIGHFG-----AWTLACVPTLGGILVGLMRWLTKEFSPGISGLIAAVQAGKEMSPTRPIIKTVAAAVSLGTGASLGPEGPSVEVGANFGLLVGQSLKVSRDRQRLLLGAGAAAGLAAGFNAPIAGVFFALEV-------------VLGTTFETSAASIVLLSAVVSALIAQIGLGGQPAFALPAYEVRSPL-ELPLYLGLGLFACVVSIAYTTSLKWASDVFQGK--IPGTVWMAKIPREAQPILGGLCVGLVALKLPQILGVGYDTVEAMLRDVQFSLLLLMTLLVVKLLMTAVSLGSGLIGGMFAPAMFLGATLGAAYGKVLPFVFPMFAG------SIAAPPAYAMVGMAAVLAASVNAPLTSILLLFEMTRDYRIVLPLMAAVGLSVWLANLLK 443          
BLAST of NO03G05060 vs. NCBI_GenBank
Match: WP_026082121.1 (CBS domain-containing protein [Fischerella sp. PCC 9339])

HSP 1 Score: 279.6 bits (714), Expect = 3.600e-71
Identity = 185/448 (41.29%), Postives = 262/448 (58.48%), Query Frame = 0
Query:  171 PTTFFLVQAALIGLATGLSIITFKTLISVMETYTYGSFLTSALNAFGSGKPLSLAMAAIPALGGVCVGVIRETARDFPPGLNGQIEDVDKQKPLDLKRALLKSLAAVATLGTGCSLGPEGPAVELGVVTSRVITSKVSVEQRKQLLL--AGAAAGVAAGFNAPIAGVFFALEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVARVGLKEELALRPAAYLLSNPLVELPGYLGLGVLSGLVALSFRYLCGKFEELFAGKTRVPALNVMGKVPRFLKPVIGGALCGLTGILFPQVLFFGYETLDGLIANQSYPALLLVGLLGLKAVMTAICLASGLVGGLFAPSLFLGATAGAAYQKLLTFFLQS-SGLVATLIPIAGPPAYAMVGAASVLASMFRAPLTGSLLLFELTRDYDILLPLMASAGMGSLLVELVERKRTADEAL 616
            P T  L  A LIG  +G+ ++TF  LI ++      + L S +  +G     +  +A +P LGG+ VG++R   +DF PGL+  I D  K +     R + K LAA  +LG+G SLGPEGP+VE+G     +++  + V Q +Q LL  AGAAAG+AAGFNAPIAGVFFALE+                                 +A +A +GL  + A     Y + +PL ELP YLGLG+ + +V+L++  L    +  FAGK  VP  +++GK+P  + P+IGG + GLT +  PQ+L  GYET++ ++ +  +   LL+ LL +K  MTAI   SG VGG+FAP++FLGA+ G+AY K+L     + SG       +A PPAYAMVG A+VLA+  RAPLT  LLLFELTRDY I+LPLMA+ G+   LVE ++    ++  L
Sbjct:   36 PETIVLFLALLIGSGSGMGVVTFHYLIQLIHHLMLEN-LMSVIGVWG-----AWTLACVPILGGLIVGLMRWRTQDFGPGLSSLIADSQKGEVKRQLRPVTKMLAAAVSLGSGASLGPEGPSVEIGANFGMLVSVVLQVSQERQRLLLGAGAAAGLAAGFNAPIAGVFFALEV------------VLGATSFATSAVSVVLLAAVVAAFIAHIGLGGQPAFALPVYQVRSPL-ELPLYLGLGLWASVVSLTYTQLIRLAKACFAGK--VPGFSILGKIPLPIHPIIGGLIIGLTALYLPQILGIGYETIEAMLQDVEFSLQLLILLLVVKLAMTAISAGSGFVGGVFAPAMFLGASLGSAYAKILANVAPAISGF------MAAPPAYAMVGMAAVLAASVRAPLTAILLLFELTRDYRIVLPLMAAVGLSVWLVERIKPNANSNSNL 456          
The following BLAST results are available for this feature:
BLAST of NO03G05060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ30998.15.700e-9343.18Chloride channel protein EriC [Ectocarpus siliculo... [more]
CEM31324.11.500e-9049.56unnamed protein product [Vitrella brassicaformis C... [more]
XP_005707536.14.500e-8245.37chloride channel/carrier, CIC family [Galdieria su... [more]
EWM29943.11.000e-8189.30cl- channel voltage-gated family protein, partial ... [more]
XP_002183492.12.900e-8144.12predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002177841.11.300e-7644.30predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_005536888.11.700e-7642.67probable CLC-type chloride channel [Cyanidioschyzo... [more]
WP_007355298.11.900e-7241.13MULTISPECIES: chloride channel protein [Kamptonema... [more]
WP_017287036.12.100e-7141.46CBS domain-containing protein [Leptolyngbya boryan... [more]
WP_026082121.13.600e-7141.29CBS domain-containing protein [Fischerella sp. PCC... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005375NSK005375Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05060.1NO03G05060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|645947gene_1713Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Chloridegene699Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05060.1NO03G05060.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05060 ID=NO03G05060|Name=NO03G05060|organism=Nannochloropsis oceanica|type=gene|length=2913bp
ATGATGGGAGCAGGGCAAGATGACAAGGCTATGATCGACGCGGGCTTGCC
ACCATCCAGAAGAAAACGGCGCACGAGAATAAGACCCCTCCTTCCACCCT
CAACAGCAGCAGCCTCAGCATCATCATTACCAGCCAACTCGTCCTCCTCT
ACCTCACCGTCTCCTTTCCTCCATCCCCTCTGTCTCTGCGCATGCGTCGT
CATCCTCCTCTTCCTCCCCATTAGCACCGCGGCCTTCTGCCTTCCACCCT
CCTCCCCGCACTACCGCCGCCTCCTCTCCCCCACCCCTCCCTGCTTCTCC
TCCCCCACGCACAAGAGCGTTCCCTCCCGCTCCTTCACCCTACCCCAACG
CCCTTCCTCTTCCCCCCTCACACGCACCTCTTTCAGTGGGCCCGATCAAC
CTCCCCGTCCTTCCTCCGCCACCTCTTCCTCCTCCTCCACCTCCTCCCTC
CGCCTCGCCATCCTCACCCGCATCGTCGGCAAATTGGAGAAAGCCGATAT
AGGCCTCCTGCCCACCACATTCTTCCTCGTCCAAGCCGCGCTCATCGGTC
TTGCCACGGGCTTGAGTATTATTACGTTCAAAACACTCATTAGTGTGATG
GAAACGTACACCTACGGGAGTTTCTTGACATCGGCCTTAAATGCCTTTGG
GTCAGGTAAGCCCCTCTCCTTGGCAATGGCGGCCATCCCTGCCCTGGGCG
GTGTATGTGTGGGGGTCATCAGAGAGACAGCTAGAGACTTTCCTCCTGGA
TTGAACGGGCAGATCGAAGACGTCGACAAACAGAAGCCGTTGGATTTGAA
ACGGGCGTTACTCAAGTCCCTGGCGGCCGTTGCGACTCTGGGCACGGGGT
GCTCTCTTGGTCCTGAAGGGCCGGCAGTCGAGCTCGGGGTTGTGACGTCA
CGTGTGATTACAAGCAAGGTAAGTGTGGAGCAACGGAAGCAATTGTTGTT
GGCGGGGGCGGCCGCCGGGGTCGCCGCTGGGTTTAATGCTCCTATTGCCG
GGGTGTTTTTTGCGTTGGAGATCGCGAGCAGCAACGGGGGAGGAGGGAGC
GATGGAGGAGGAGGAGGAGGAGGGGGGATACAGAAATCGACCTTGGCGGC
CATCTTACTGTCGGCGGTGATCAGTGCGTTGGTGGCAAGAGTCGGTTTGA
AGGAGGAGCTGGCACTACGGCCTGCGGCTTATCTGCTCTCGAACCCCCTG
GTGGAATTACCTGGCTATCTGGGTCTGGGGGTGTTGAGTGGCCTCGTCGC
CTTGAGCTTCCGATACCTCTGCGGTAAATTCGAGGAATTGTTCGCAGGGA
AGACGCGGGTGCCTGCATTGAATGTCATGGGGAAGGTGCCACGCTTTCTG
AAGCCGGTCATAGGCGGGGCCTTGTGCGGACTCACTGGTATACTGTTCCC
TCAGGTCCTTTTCTTTGGGTATGAGACATTGGATGGATTGATCGCGAACC
AAAGCTACCCGGCACTGCTGCTGGTGGGACTGTTGGGGCTCAAGGCGGTG
ATGACCGCCATCTGCCTCGCATCTGGATTGGTCGGTGGTCTCTTTGCCCC
TTCCCTTTTCTTGGGAGCGACTGCCGGGGCCGCGTATCAAAAACTGCTGA
CGTTTTTCTTGCAGTCTTCCGGCTTGGTGGCTACCTTGATTCCGATTGCA
GGACCTCCGGCTTACGCTATGGTGGGTGCGGCGAGTGTATTGGCCTCCAT
GTTTCGGGCGCCGTTGACTGGCAGTTTATTGCTGTTTGAATTGACGAGGG
ACTACGACATTTTGTTGCCGTTGATGGCTAGTGCGGGAATGGGGTCTTTG
CTAGTGGAGCTGGTGGAGAGAAAGAGGACGGCGGATGAGGCGTTGGTGCG
TGAGGAAACCGGTCGAGGAGCTGAAGGAGGGCAACAGGGGGAGGGGGAAG
GAGGGATGGAGGGACGGGGAGGGGGGGAAGAGTTTGAGGACCAGGCGGCA
GCGGTAGAGGTGCTGGGGACATTGCTGCCGGAGGGAGGGAGGGAGGGAGG
GAGGGGAGGGTCGATGACGGGAGCTGCGGAGGAGGGCATCATCTTACCCG
GGGCTGGGGGGGGGCGAGGGCTTATCTATAATTTGCGGGTGCAGGAGGCC
CTTGCCCCTCCTCCTGTGGTATTGGGGTCCGACACGCCGTTGGAAGAAGC
CTTGTTAAGACTGTGTGCGGACAAGTCCGAGGTGGTGGTGGTGGTGGAAG
GGGGGAAGGAGGGAGGGAGGGAGCAGCAGTTGGTAGGGGTGGCGTTGTTG
AAGGAATTGATGAGTGCGTTGGAGAGGTGGTACGACAAACAGCGAGCGGC
TGCTGCTGCTTCTGCTGCGCGCTACGTCCCTCCTTCTCGCTCTCAGCAGC
TACAGCAATCTGAAGGCGGGGCTGGCGTGACCGATAATTCGTCCTCATCC
TCTCTCCCTTTTTGGGCCTACACCTCCCCCTCCCTTCTCGAAGACACGGA
CCTGGACATGCTCCAGGCAGCACTAACGCAAGTCGTCGCTACTCTTGACG
CTGCTGAGCGGGCACAAGCACTCGCAGAGGTTCTGCGGCAGCTCCGCTGG
TCCACGGGTTTGACATTGTCGGAGGTGGTGGCCCGTGCGAAGGCATCCCA
GATATTGAGCGCTGAGGATAAGGCGATCAAGGCCCGGGATTTGCTGTCGA
CACGAGGTTTGACGTTGTTACCGGTGGTGAGTGGGAGGGAGGGAGAGGGG
GAGGGAGGGGCAGTCTTGGGGGTGGTGGATCTAGCGAGTATTCGCGCGGC
GATTGCGAGGAGGGAAACGGTAGAGATGGTGAGTAGGAGTGTGGTTGACA
TCGCCATCTCGCCGTCCTCGCCTTTCTCCTCAATGGTGGGGATGGATGAA
GGTGCGGCGGCAGCAGCAAGAGCCACAACAACGGACAAGGCGGCACGTAA
CAAAAGTTCTTAG
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protein sequence of NO03G05060.1

>NO03G05060.1-protein ID=NO03G05060.1-protein|Name=NO03G05060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=971bp
MMGAGQDDKAMIDAGLPPSRRKRRTRIRPLLPPSTAAASASSLPANSSSS
TSPSPFLHPLCLCACVVILLFLPISTAAFCLPPSSPHYRRLLSPTPPCFS
SPTHKSVPSRSFTLPQRPSSSPLTRTSFSGPDQPPRPSSATSSSSSTSSL
RLAILTRIVGKLEKADIGLLPTTFFLVQAALIGLATGLSIITFKTLISVM
ETYTYGSFLTSALNAFGSGKPLSLAMAAIPALGGVCVGVIRETARDFPPG
LNGQIEDVDKQKPLDLKRALLKSLAAVATLGTGCSLGPEGPAVELGVVTS
RVITSKVSVEQRKQLLLAGAAAGVAAGFNAPIAGVFFALEIASSNGGGGS
DGGGGGGGGIQKSTLAAILLSAVISALVARVGLKEELALRPAAYLLSNPL
VELPGYLGLGVLSGLVALSFRYLCGKFEELFAGKTRVPALNVMGKVPRFL
KPVIGGALCGLTGILFPQVLFFGYETLDGLIANQSYPALLLVGLLGLKAV
MTAICLASGLVGGLFAPSLFLGATAGAAYQKLLTFFLQSSGLVATLIPIA
GPPAYAMVGAASVLASMFRAPLTGSLLLFELTRDYDILLPLMASAGMGSL
LVELVERKRTADEALVREETGRGAEGGQQGEGEGGMEGRGGGEEFEDQAA
AVEVLGTLLPEGGREGGRGGSMTGAAEEGIILPGAGGGRGLIYNLRVQEA
LAPPPVVLGSDTPLEEALLRLCADKSEVVVVVEGGKEGGREQQLVGVALL
KELMSALERWYDKQRAAAAASAARYVPPSRSQQLQQSEGGAGVTDNSSSS
SLPFWAYTSPSLLEDTDLDMLQAALTQVVATLDAAERAQALAEVLRQLRW
STGLTLSEVVARAKASQILSAEDKAIKARDLLSTRGLTLLPVVSGREGEG
EGGAVLGVVDLASIRAAIARRETVEMVSRSVVDIAISPSSPFSSMVGMDE
GAAAAARATTTDKAARNKSS*
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Synonyms
Publications