jgi.p|Nanoce1779_2|645947, gene_1713 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|645947
Unique Namegene_1713
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:1303132..1307015 -

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Properties
Property NameValue
TranscriptId646033
ProteinId645947
Product nameChloride channel
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:1303132..1307015 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005216ion channel activity
GO:0005247voltage-gated chloride channel activity
Vocabulary: Biological Process
TermDefinition
GO:0006821chloride transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G05060NO03G05060Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|645947mRNA_1713-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|645947mRNA_1713Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|645947

>mRNA_1713-protein ID=mRNA_1713-protein|Name=jgi.p|Nanoce1779_2|645947|organism=Nannochloropsis oceanica|type=polypeptide|length=860bp
MRGPTTAILECKHFDKDRGPDQPPRPSSATSSSSSTSSLRLAILTRIVGK
LEKADIGLLPTTFFLVQAALIGLATGLSIITFKTLISVMETYTYGSFLTS
ALNAFGSGKPLSLAMAAIPALGGVCVGVIRETARDFPPGLNGQIEDVDKQ
KPLDLKRALLKSLAAVATLGTGCSLGPEGPAVELGVVTSRVITSKVSVEQ
RKQLLLAGAAAGVAAGFNAPIAGVFFALEIASSNGGGGSDGGGGGGGGIQ
KSTLAAILLSAVISALVARVGLKEELALRPAAYLLSNPLVELPGYLGLGV
LSGLVALSFRYLCGKFEELFAGKTRVPALNVMGKVPRFLKPVIGGALCGL
TGILFPQVLFFGYETLDGLIANQSYPALLLVGLLGLKAVMTAICLASGLV
GGLFAPSLFLGATAGAAYQKLLTFFLQSSGLVATLIPIAGPPAYAMVGAA
SVLASMFRAPLTGSLLLFELTRDYDILLPLMASAGMGSLLVELVERKRTA
DEALVREETGRGAEGGQQGEGEGGMEGRGGGEEFEDQAAAVEVLGTLLPE
GGREGGRGGSMTGAAEEGIILPGAGGGRGLIYNLRVQEALAPPPVVLGSD
TPLEEALLRLCADKSEVVVVVEGGKEGGREQQLVGVALLKELMSALERWY
DKQRAAAAASAARYVPPSRSQQLQQSEGGAGVTDNSSSSSLPFWAYTSPS
LLEDTDLDMLQAALTQVVATLDAAERAQALAEVLRQLRWSTGLTLSEVVA
RAKASQILSAEDKAIKARDLLSTRGLTLLPVVSGREGEGEGGAVLGVVDL
ASIRAAIARRETVEMVSRSVVDIAISPSSPFSSMVGMDEGAAAAARATTT
DKAARNKSS*
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Synonyms
Publications