NO03G05040, NO03G05040 (gene) Nannochloropsis oceanica

Overview
NameNO03G05040
Unique NameNO03G05040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1386
Alignment locationchr3:1429425..1430810 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1429425..1430810 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO03G05040 vs. NCBI_GenBank
Match: EWM29942.1 (hypothetical protein Naga_100510g3 [Nannochloropsis gaditana])

HSP 1 Score: 518.5 bits (1334), Expect = 2.000e-143
Identity = 275/410 (67.07%), Postives = 307/410 (74.88%), Query Frame = 0
Query:   20 VAEAFHVRLPLPVLRPGIAAAVTYS-------HSHXXXXXXXXXXXXXXXXXYNDQNGSGSSSRSKEGTVMDEAQLGEVEEEADLDGTGATLVMPSATTGPTSAAAPAVFQLWKRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLAIMWTGVINCISCLPMSKFRTGTSGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLTPFVTTVVDVGTLGREVSINPFE 423
            V +AFHVRL      P +A     S        SH                  +D   SG S       V++E + GE + E +      T V+ ++   P +  A A+FQLWKRRLWTKADYLHSHAVSG AFMVLGALYVL+F+GD++F G+ LA AE GVVGWVPLAIMWTGV+NCISCLPMSKFR G  GGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYP+WMAPVDP+LA+GFLAVI+HGIVNSEVALAKELEEKAPAM+PEGVW S+PS                    ERETRTEI+LNHRVASYPNLLHLPVLYN+ILGGQ WLQQ++ KFPLEPTLLFHASFGIAVANSIVFLGATLKDR+LMTLRQWLLLQVVV+TPFVTTVVDV +LGREVSINP E
Sbjct:   18 VLQAFHVRLVPKHALPALARRSPVSSLIFGPPSSHGLHHSRIRSSGFAMYNSPDDGTSSGQS------VVVEEVEKGETDLELN-----DTAVLTASVGSPATETANAMFQLWKRRLWTKADYLHSHAVSGAAFMVLGALYVLFFVGDQVFGGSALAQAERGVVGWVPLAIMWTGVVNCISCLPMSKFRAGPQGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPSWMAPVDPLLALGFLAVIVHGIVNSEVALAKELEEKAPAMSPEGVWSSTPSSPASSPDAS---------LTERETRTEIVLNHRVASYPNLLHLPVLYNVILGGQPWLQQVVAKFPLEPTLLFHASFGIAVANSIVFLGATLKDRKLMTLRQWLLLQVVVMTPFVTTVVDVWSLGREVSINPLE 407          
BLAST of NO03G05040 vs. NCBI_GenBank
Match: CEM15061.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 262.7 bits (670), Expect = 2.000e-66
Identity = 150/349 (42.98%), Postives = 200/349 (57.31%), Query Frame = 0
Query:   84 DEAQLGEVEEEADLDGTGATLVMPSATTGPTSAAAPAVFQLWKRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGW----VPLAIMWTGVINCISCLPMSKFRTGTSGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLTPFVTTVVDVGTLGREVSINPFEVYAGLI 429
            DE   G  + +A + G      +P         A  A ++  ++R+WT  D+LH HAVSG  FM LG L+  + L   +    G     + ++ W      + ++   ++NC +C+PMSKFR     G+DTKG GFKGLG GMT+L  W A + SG+YP  +    P +A  FLA I+HGI  SE AL   +         +  W    S                      E R +I+LNHRVASYPNLLHLP+L+NI +GG+ WL  +L  FP E  LL+ A+FG+A+ANSIVFLGATLKDRRLMTLR+WL LQ+VVL PFV+TVVD    G  +S+ P+EVYAGL+
Sbjct:  106 DEIMTGGADVDARVGGASDVRRIPRVNAAKVFTA--AYWRECRKRMWTSMDWLHLHAVSGVLFMGLGTLWFGWELARPVLGVEGAFEMPSPLLPWRADSASMTLLMVAILNCFTCIPMSKFR----NGHDTKGDGFKGLGTGMTLLAAWEALWVSGYYPPVLEAATPAIATAFLATIVHGIWTSEKALEGAVHRL------DAKWARGSSNRETSLSYD-------------EMRNDIVLNHRVASYPNLLHLPILWNIGIGGRGWLDTVLQSFPGESALLYDAAFGMALANSIVFLGATLKDRRLMTLREWLALQLVVLAPFVSTVVDCCVYGDSISVKPWEVYAGLV 429          
BLAST of NO03G05040 vs. NCBI_GenBank
Match: CEM02202.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 219.9 bits (559), Expect = 1.500e-53
Identity = 127/308 (41.23%), Postives = 182/308 (59.09%), Query Frame = 0
Query:  126 KRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGW----VPLAIMWTGVINCISCLPMSKFRTGTSGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLTPFVTTVVDVGTLGRE-VSINPFEVYAGLI 429
            KRRLWT+ D+LH HA+SG A++ LG L+ L+ +         L    +    W    + +A++  GV+NC+SC PMSK  +        K  GF+GLG+GMT+LG+W A + SG YP  +      +   FL +I+ GI  +E AL  +L   +       +   +P                       E R E ++ HR+ASYPNLLH P+L+N+++GG++WL ++L  FP E  LL+HA+FG+A+AN+IVFLGATL+ R+LMT RQW+ LQ+VVL PF +TVVD    G E VS+NP ++YAG I
Sbjct:  138 KRRLWTRMDWLHIHAISGVAYIGLGGLWFLWEMVGPSLGLQQLVPPPSPYDLWQADALSVALLLVGVLNCVSCAPMSKHMS------PAKSEGFEGLGVGMTLLGVWEALWVSGFYPPSLEWATDGIGAVFLFMILRGIYTAERALESDLAMISAKYALGRI--RTPGAF-------------------AEARLESMVIHRIASYPNLLHTPILWNMLVGGREWLDRVLDTFPAESILLYHAAFGMALANAIVFLGATLQHRKLMTSRQWIALQLVVLAPFWSTVVDCLVYGPETVSVNPLDMYAGFI 418          
BLAST of NO03G05040 vs. NCBI_GenBank
Match: XP_005759533.1 (hypothetical protein EMIHUDRAFT_432986 [Emiliania huxleyi CCMP1516] >EOD07104.1 hypothetical protein EMIHUDRAFT_432986 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 139.4 bits (350), Expect = 2.600e-29
Identity = 98/312 (31.41%), Postives = 157/312 (50.32%), Query Frame = 0
Query:  126 KRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLA--------IMWTGVINCISCLPMSKFRTGTS-GGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELE--EKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLT-PFVTTVVDVGTLGREVSINPFEVYA 426
            +RRLWT+AD++H HAVSG  F+ LG  +++Y            +H  N +   VP+A        ++  G++N +S +PMSKF +       D K  GF   G G+T + ++ A++FSG YP ++ P D  + + +  V      N EV L +  +  E+     P                             E+E R + IL +R+AS+PNL  L  +Y+I  GG  WLQQ   ++P++ T ++H     A+  ++     TL+DR+L+TL Q LL+ +V  T P V+ ++D  T G  V+I+P E +A
Sbjct:  157 RRRLWTRADFMHIHAVSGAYFLFLGIPWLVY------------SHVTNALDTSVPMATSGPFLTSLLVAGLVNALSAVPMSKFNSNKMLDMRDLKANGFTFGGTGLTTMCLYIAWWFSGDYPDFLRPFDIPIFLFWALVCAGTTANWEVMLQQNFQANERRRVKVP-----------------------------EKEMRQKAIL-YRLASWPNLTQLSFMYSIPFGGAAWLQQCTAQWPMQSTPMYHYGIASAMGYALSMFSETLRDRKLVTLEQDLLVLIVGFTFPMVSVLLDGLTYGSAVTISPPEYWA 426          
BLAST of NO03G05040 vs. NCBI_GenBank
Match: EJK67640.1 (hypothetical protein THAOC_11301 [Thalassiosira oceanica])

HSP 1 Score: 131.7 bits (330), Expect = 5.300e-27
Identity = 101/363 (27.82%), Postives = 168/363 (46.28%), Query Frame = 0
Query:   69 NGSGSSSRSKEGTVMDEAQLGEVEEEADLDGTGATLVMPSATTGPTSAAAPAVFQLWKRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLAIMWTGVINCISCLPMSKFRTGTSGGY-DTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVV-VLTPFVTTVVDVGTLGREVSINPFE---VYAG 427
            N  G S   K   +     L +VE++AD     A L + S  T              +RRLWTKAD++H HA++GT F+ LG  ++LY        G        G  G    +++ TG+ N +S +PMS+F +     + D K  GF   G G+T + +W A++FSG YP  + P++      + A+ +    N E  L +  E            K +                       ++   +  L +R+AS+PNL  L  + +I LGG++W+  +   +P++   ++H     A+  ++  L  TL+DR+L+ L+  L+L +   L P V+ VVD  T G  ++INP +   ++AG
Sbjct:  313 NSFGPSMIGKGAQLPSVRDLKKVEDKADSPFAEALLAIDSTGT-------------IRRRLWTKADFMHIHAITGTYFLALGMAWLLY----SHVVGFQNPEQMMGTTGPFLASLLLTGLGNALSAIPMSRFSSDKMFDFEDLKANGFTIGGTGLTCMSLWVAWWFSGSYPDALEPLNTAFFFLWAAICVGSTANWEYMLQQNFENSTGKARRGKFGKQT-----------------------QDEMNKKALLYRIASWPNLTQLMFISSIPLGGREWVGSMTDTWPMQMIPMYHYGLVSAIGYALSMLAETLRDRKLIDLQTDLMLLIFGFLIPIVSVVVDSVTYGDAITINPLDYWVIFAG 635          
BLAST of NO03G05040 vs. NCBI_GenBank
Match: XP_005783002.1 (hypothetical protein EMIHUDRAFT_442486 [Emiliania huxleyi CCMP1516] >EOD30573.1 hypothetical protein EMIHUDRAFT_442486 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 131.0 bits (328), Expect = 9.100e-27
Identity = 98/323 (30.34%), Postives = 157/323 (48.61%), Query Frame = 0
Query:  126 KRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLA--------IMWTGVINCISCLPMSKFRTGTS-GGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELE--EKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGG-----------QDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLT-PFVTTVVDVGTLGREVSINPFEVYA 426
            +RRLWT+AD++H HAVSG  F+ LG  +++Y            +H  N +   VP+A        ++  G++N +S +PMSKF +       D K  GF   G G+T + ++ A++FSG YP ++ P D  + + +  V      N EV L +  +  E+     P                             E+E R + IL +R+AS+PNL  L  +Y+I  GG             WLQQ   ++P++ T ++H     A+  ++     TL+DR+L+TL Q LL+ +V  T P V+ ++D  T G  V+I+P E +A
Sbjct:  157 RRRLWTRADFMHIHAVSGAYFLFLGIPWLVY------------SHVTNALDTSVPMATSGPFLTSLLVAGLVNALSAVPMSKFNSNKMLDMRDLKANGFTFGGTGLTTMCLYIAWWFSGDYPDFLRPFDIPIFLFWALVCAGTTANWEVMLQQNFQANERRRVKVP-----------------------------EKEMRQKAIL-YRLASWPNLTQLSFMYSIPFGGAASLGQGPVLRAAWLQQCTAQWPMQSTPMYHYGIASAMGYALSMFSETLRDRKLVTLEQDLLVLIVGFTFPMVSVLLDGLTYGSAVTISPPEYWA 437          
BLAST of NO03G05040 vs. NCBI_GenBank
Match: CBJ25962.1 (expressed unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 127.5 bits (319), Expect = 1.000e-25
Identity = 94/350 (26.86%), Postives = 160/350 (45.71%), Query Frame = 0
Query:   80 GTVMDEAQLGEVEEEADLDGTGATLVMPSATTGPTSAAAPAVFQLWKRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLAIMWTGVINCISCLPMSKFRTGTSGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLL-HLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLTPFVTTVVDVGTLGREVSINPFEVYAGLI 429
            G V  E      EE   L  T     +P       +A  P    + +RR+ TK D++H HA SG  ++  G+LY+L  +G ELF G      +      +PL ++  G +N  S +PM+  R+                G+ ++ + +W A++ SG YPA +AP DP LA   L++++   V +E  +  E  ++   +  +G  ++                    + +  +   E    +R  SY +L+ + P LY  ++ G  W+++L   FP  P LLFHA   +A + SI FL  TL  RRL+  +    +Q +   P V +++D   +G   + NP ++Y G +
Sbjct:  136 GAVAQEEVRQAGEEVVRLTATTVARALPGTW---LTAGLPKWMHILRRRMITKEDWMHLHASSGALYIAGGSLYLLGVIGMELFTGT----PQLDTTSALPLCVLGFGALNTFSSIPMANTRSWVLS------------GLCLSTMQLWNAWYVSGAYPASLAPADPWLAAANLSLLVIACVEAEEQILAEKRQR-EILAQKGRRRTG------------------KIHIRGDDHVEGDAMNRAGSYGSLIFNAPHLYATLV-GSGWVERLGEAFPDSPALLFHAYVALATSTSIAFLAPTLYQRRLIDAKMMSSMQFLTFAPAVMSLIDASVMGAAATNNPIDIYLGFL 446          
BLAST of NO03G05040 vs. NCBI_GenBank
Match: XP_009036969.1 (hypothetical protein AURANDRAFT_64248 [Aureococcus anophagefferens] >EGB08238.1 hypothetical protein AURANDRAFT_64248 [Aureococcus anophagefferens])

HSP 1 Score: 127.1 bits (318), Expect = 1.300e-25
Identity = 110/336 (32.74%), Postives = 157/336 (46.73%), Query Frame = 0
Query:   99 GTGATLVMPSATTGPTSAAAPAVFQLW-KRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAE-NGVVGWVPLAIMWTGVINCISCLPM-SKFRTGTSGGYDTKGA-GFKGLGIGMTMLGIWTAYFFSGHYPAWM-APVDPVLAIGFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWL-LLQVVVLTPFVTTVVDVGTLGREVSINPFEVYAGLI 429
            GT   L +P     P +A  P V   + KR+LWTK D+ HSHAVSG AF+ LG  ++      E  AGA  A A  +G  G   LAI+  GV N +S LPM S  R   +   D   A  F+  G    +   W  ++FSG YPA++   VD  L +  +A I   I  SE ++A    + A      G   S                      +      ++    R+ SYPNL  LPVL N++LGG+ WL ++L +FP +  LL H  F  A++ +I F   TL+DR ++ +   L +L      PF+T  VDV       ++NP +   G +
Sbjct:  146 GTFLELEVPDLAPAPPAAPRPRVTAAYLKRKLWTKLDFAHSHAVSGAAFLALGVGWLGAVARGEA-AGAVEAGARIHG--GPASLAILAVGVWNSVSALPMASDERVYVTRDLDRYHALAFRWGGSAQLVACAWLCWWFSGLYPAFVPGVVDGALCLAAMASIAWVIYFSEESIAVVDRKVAEGGFVHGKRASE---------------------LTAGEHAQLSALARLGSYPNLFQLPVLANVLLGGRPWLDRVLDEFPHQSALLHHYLFACALSYAITFFATTLRDRNVIGITADLAMLATGTALPFLTMFVDVAAFPAATTLNPLDYNVGFL 457          
BLAST of NO03G05040 vs. NCBI_GenBank
Match: XP_009038043.1 (hypothetical protein AURANDRAFT_64930 [Aureococcus anophagefferens] >EGB07426.1 hypothetical protein AURANDRAFT_64930 [Aureococcus anophagefferens])

HSP 1 Score: 125.9 bits (315), Expect = 2.900e-25
Identity = 104/336 (30.95%), Postives = 162/336 (48.21%), Query Frame = 0
Query:   96 DLDGTGATLVMPSATTGPTSAAAPAVF-QLWKRRLWTKADYLHSHAVSGTAFMVLGALYVLYFLGDELFAGAGLAHAENGVVGWVPLAIMWTGVINCISCLPMSKFRTGTSGGY-DTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAIGFLAVIIHGIVNSEVALAKEL---EEKAPAMTPEGVWKSSPSXXXXXXXXXXXXXXXXXLAVERETRTEIILNHRVASYPNLLHLPVLYNIIL-GGQDWLQQLLLKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVV-VLTPFVTTVVDVGTLGREVSINPFEVY 425
            ++D   AT+       G    A  AVF    +RRLWTKAD++H+HA SG  F+V   L++LY       AG   A A     G +  +++  GV N ++ +PM++F +       D K  GF   G G+T++ IW A +FSG YPA + P  P   + + +V     +N E+ L +     EE    M   G  K+                     A   E   + IL +R+AS+PNL  L  LY++ L     W   ++ ++P +  L +H  F  AV  ++     TL+DR+L++LR  L++ VV V  P V+  +D   LG  V++NP + +
Sbjct:   93 EMDLAKATVDASEGLAGLGGDAIAAVFGDTVRRRLWTKADFMHAHAASGAYFLVGAPLWLLY--SHATAAGHLDAVATWRFDGPLETSLLVAGVANALTAIPMARFSSNKMFDVTDLKANGFTFGGAGLTLMSIWIAAWFSGGYPAALLPAGPAFFLLWASVCAGTTLNWEIMLQQNFEAAEEANKEMATRGGRKTD-------------LERKFKTATPEELNEKAIL-YRLASWPNLTQLLFLYSLCLPDAAMWWAGVVERYPNQGVLGYHYGFASAVGYALSMFSETLRDRKLVSLRVDLIILVVGVFLPMVSVGLDGVLLGDTVTVNPLDYW 412          
The following BLAST results are available for this feature:
BLAST of NO03G05040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 9
Match NameE-valueIdentityDescription
EWM29942.12.000e-14367.07hypothetical protein Naga_100510g3 [Nannochloropsi... [more]
CEM15061.12.000e-6642.98unnamed protein product [Vitrella brassicaformis C... [more]
CEM02202.11.500e-5341.23unnamed protein product [Vitrella brassicaformis C... [more]
XP_005759533.12.600e-2931.41hypothetical protein EMIHUDRAFT_432986 [Emiliania ... [more]
EJK67640.15.300e-2727.82hypothetical protein THAOC_11301 [Thalassiosira oc... [more]
XP_005783002.19.100e-2730.34hypothetical protein EMIHUDRAFT_442486 [Emiliania ... [more]
CBJ25962.11.000e-2526.86expressed unknown protein [Ectocarpus siliculosus][more]
XP_009036969.11.300e-2532.74hypothetical protein AURANDRAFT_64248 [Aureococcus... [more]
XP_009038043.12.900e-2530.95hypothetical protein AURANDRAFT_64930 [Aureococcus... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005377NSK005377Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05040.1NO03G05040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573185gene_1711Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100510g3gene702Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05040.1NO03G05040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05040 ID=NO03G05040|Name=NO03G05040|organism=Nannochloropsis oceanica|type=gene|length=1386bp
ACTACAGGGCACGCAATGAAGGCTTCACCACCCCTTTTTACCTCAACCCT
AGCCGCGCTGGCCCTGCTCGCGGTCGCCGAGGCTTTCCACGTCCGCCTCC
CTCTTCCAGTTCTGAGACCAGGAATAGCAGCCGCCGTCACATACTCCCAT
TCCCATCCCAGCTCCAGCTCTGGCCTGATCTTTATGCGAAGAAGAAGGAC
CGTTCTCTACAATGATCAGAATGGTAGCGGCAGCAGCAGCCGCAGCAAGG
AAGGCACTGTGATGGATGAGGCGCAGCTGGGAGAGGTAGAGGAAGAGGCC
GACCTAGACGGCACCGGGGCGACGCTTGTCATGCCCTCCGCCACTACCGG
ACCCACCTCGGCCGCAGCTCCTGCCGTGTTCCAGCTCTGGAAGCGACGGT
TGTGGACCAAGGCGGATTATCTCCATTCGCACGCCGTGTCGGGCACAGCG
TTCATGGTGCTTGGGGCGCTCTATGTCCTATATTTCCTTGGGGACGAGCT
TTTTGCCGGGGCGGGCTTGGCGCACGCTGAGAACGGGGTGGTAGGATGGG
TTCCTCTGGCCATTATGTGGACAGGTGTGATCAACTGCATAAGTTGCTTG
CCCATGTCCAAGTTTCGGACAGGGACCAGTGGCGGGTACGACACGAAGGG
GGCGGGTTTTAAGGGGTTGGGGATTGGAATGACCATGCTGGGGATATGGA
CGGCTTATTTCTTCTCGGGACACTACCCTGCGTGGATGGCACCAGTTGAT
CCAGTCCTGGCAATCGGGTTCTTGGCGGTGATTATCCATGGCATCGTGAA
CTCGGAGGTGGCTTTAGCGAAAGAGCTGGAAGAGAAGGCGCCGGCCATGA
CCCCTGAGGGAGTGTGGAAGTCCTCCCCCTCTTCCTCTGACGAGACCGAC
CCAACCGCAGCAGCTGCAGCGACCCAACAGCAGCTGGCCGTCGAAAGAGA
GACACGCACGGAGATCATTCTCAATCACCGCGTGGCTTCCTACCCTAATC
TGCTGCACCTTCCCGTCCTCTACAACATTATTCTCGGAGGCCAAGACTGG
CTGCAGCAGCTCCTCCTCAAGTTTCCCCTCGAGCCCACCCTCCTCTTTCA
TGCCTCCTTCGGGATTGCTGTAGCGAACAGCATTGTATTTTTGGGTGCCA
CCTTGAAGGATCGACGATTGATGACCTTACGGCAATGGCTGTTGTTGCAG
GTGGTGGTGTTGACTCCGTTCGTCACCACAGTGGTGGATGTGGGAACGTT
GGGAAGAGAGGTGAGCATTAATCCGTTTGAGGTGTATGCGGGCTTGATCG
GCTGAGGGGGGACTGAAGCGGAGGAGGGGGGCATTATGCAGGGGCGGACG
CGATGGTCTTCGGGATTGCTGGAGGGAGGGCAGAAA
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protein sequence of NO03G05040.1

>NO03G05040.1-protein ID=NO03G05040.1-protein|Name=NO03G05040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=430bp
MKASPPLFTSTLAALALLAVAEAFHVRLPLPVLRPGIAAAVTYSHSHPSS
SSGLIFMRRRRTVLYNDQNGSGSSSRSKEGTVMDEAQLGEVEEEADLDGT
GATLVMPSATTGPTSAAAPAVFQLWKRRLWTKADYLHSHAVSGTAFMVLG
ALYVLYFLGDELFAGAGLAHAENGVVGWVPLAIMWTGVINCISCLPMSKF
RTGTSGGYDTKGAGFKGLGIGMTMLGIWTAYFFSGHYPAWMAPVDPVLAI
GFLAVIIHGIVNSEVALAKELEEKAPAMTPEGVWKSSPSSSDETDPTAAA
AATQQQLAVERETRTEIILNHRVASYPNLLHLPVLYNIILGGQDWLQQLL
LKFPLEPTLLFHASFGIAVANSIVFLGATLKDRRLMTLRQWLLLQVVVLT
PFVTTVVDVGTLGREVSINPFEVYAGLIG*
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Synonyms
Publications