NO03G04770, NO03G04770 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G04770
Unique Name	NO03G04770
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2792
Alignment location	chr3:1355200..1357991 +

Link to JBrowse

Properties


Property Name	Value
Description	Glutaredoxin 3

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:1355200..1357991 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity
GO:0009055	electron transfer activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR004480	Monothiol_GRX-rel
IPR013766	Thioredoxin_domain
IPR002109	Glutaredoxin

Homology

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BLAST of NO03G04770 vs. NCBI_GenBank
Match: EWM29897.1 (glutaredoxin 3 [Nannochloropsis gaditana])

HSP 1 Score: 516.9 bits (1330), Expect = 5.100e-143
Identity = 261/370 (70.54%), Postives = 293/370 (79.19%), Query Frame = 0

Query:    1 MEGSSTGRVVDVMSKAQWDALLKDGIPAVAFFWADWHEPSKLQGQMDLVFTHLAALHPSLHFFRVEAEAVPDVSVIFSIAVVPTFVFLREGKITDKQEGAHSAELAKKVQAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGTDGSLENRLKRLITQAPVVVFMKGSPSNPRCGFSRSLVELLKSEQIAFASFDILEDNEVRQGLKVYSDWKTYPQLYVNGELVGGLDIVKEMVVEGGNSGRLKEELGIKDVPLSSVPSASSAPSSAPSLETRLTALINKAPVMLFMKGDPATPRCGFSNQMVSILQKAGVAFDTFDILSDEEVRQGLKKLSQWPTYPQLYVKGELIGGLDIVKELQETGELESALKG 371
            M  +    V+DVMSKAQWD LLKD  P VAFFWADWHEPSK QGQMD VFTHLAALHPSL F RVEAEAVP+VSV+F I+VVP+FVF ++GK+ DKQEGAH AELAKK+Q+                               +G+ G L +RLK LITQAPVV+FMKGS SNPRCGFSRS+VELLK+E+IAFASFDIL+D+EVRQGLK YSDWKTYPQLYVNGELVGGLDIVKEMVVEG  SGRLKE LGIK++P S    A+S       LETRL AL+N APVMLFMKGDPA P+CGFSNQMVSIL+K GVAF +FDIL DEEVRQGLKK+SQWPTYPQLYVKGEL+GGLDIVKE++E GEL+SALKG
Sbjct:    1 MTANGAREVIDVMSKAQWDTLLKDDFPTVAFFWADWHEPSKPQGQMDSVFTHLAALHPSLRFLRVEAEAVPEVSVLFGISVVPSFVFFQKGKVADKQEGAHPAELAKKIQSLSAAAAALSTRTGNSDAVLVAANATTVKETASGSTGGLNHRLKALITQAPVVLFMKGSSSNPRCGFSRSMVELLKTEKIAFASFDILQDDEVRQGLKDYSDWKTYPQLYVNGELVGGLDIVKEMVVEGA-SGRLKEALGIKELPES---DAASPADDVNPLETRLKALVNAAPVMLFMKGDPAAPKCGFSNQMVSILKKTGVAFQSFDILQDEEVRQGLKKISQWPTYPQLYVKGELVGGLDIVKEMEEGGELDSALKG 366

[Close]

BLAST of NO03G04770 vs. NCBI_GenBank
Match: ETI40977.1 (Grx4 family monothiol glutaredoxin [Phytophthora parasitica P1569])

HSP 1 Score: 338.6 bits (867), Expect = 2.500e-89
Identity = 182/364 (50.00%), Postives = 238/364 (65.38%), Query Frame = 0

Query:    6 TGRVVDVMSKAQWD-ALLKDGIPAVAFFWADWHEPSKLQGQMDLVFTHLAALHPSLHFFRVEAEAVPDVSVIFSIAVVPTFVFLREGKITDKQEGAHSAELAKKVQAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGTDGSLENRLKRLITQAPVVVFMKGSPSNPRCGFSRSLVELLKSEQIAFASFDILEDNEVRQGLKVYSDWKTYPQLYVNGELVGGLDIVKEMVVEGGNSGRLKEELGIKDVPLSSVPSASSAPSSAPSLETRLTALINKAPVMLFMKGDPATPRCGFSNQMVSILQKAGVAFDTFDILSDEEVRQGLKKLSQWPTYPQLYVKGELIGGLDIVKELQETGELESAL 369
            TG VV V S AQ+D A  ++   +V+FFWA++HE  +  GQ+D+V   LA LHP + F +V AE +P++S  F IAVVPTFV  +   + DK EGA+ AELAK+V             XXX                    D +L+ RLK+LI+ +PV++FMKG+P+ P+CGFSR +V LL  E+I F +FDIL D+EVRQGLK +S+W TYPQLYVNG L+GGLDIVKEM  EG     + E+LG+      +V  A +A       +  L AL+N APV+LFMKG P+ P+CGFS + V +L+   +AF +FDILSDE+VRQGLKK S WPTYPQLYVKG+LIGGLDI+ E+ E G+L   L
Sbjct:    5 TGSVVSVQSAAQFDEATARESTLSVSFFWAEFHEACRPNGQLDVVVRQLATLHPRIRFLKVAAEELPELSERFQIAVVPTFVIAQGRAVLDKLEGANVAELAKRVDVLSKSVAKSSSTXXXTAEEAPKP-----------LDDALQYRLKKLISASPVMLFMKGNPTEPKCGFSRQMVTLLNEEKIQFGTFDILNDDEVRQGLKQFSNWPTYPQLYVNGSLIGGLDIVKEMKSEGS----IVEQLGL----TKNVEEAEAA------FQESLRALVNSAPVLLFMKGTPSEPKCGFSKKTVKLLRDHQIAFSSFDILSDEQVRQGLKKFSNWPTYPQLYVKGKLIGGLDILNEMAEDGDLSEQL 343

[Close]

BLAST of NO03G04770 vs. NCBI_GenBank
Match: ETK81081.1 (Grx4 family monothiol glutaredoxin [Phytophthora parasitica] >ETL34499.1 Grx4 family monothiol glutaredoxin [Phytophthora parasitica] >ETP10758.1 Grx4 family monothiol glutaredoxin [Phytophthora parasitica CJ01A1])

HSP 1 Score: 338.6 bits (867), Expect = 2.500e-89
Identity = 179/364 (49.18%), Postives = 235/364 (64.56%), Query Frame = 0

Query:    6 TGRVVDVMSKAQWD-ALLKDGIPAVAFFWADWHEPSKLQGQMDLVFTHLAALHPSLHFFRVEAEAVPDVSVIFSIAVVPTFVFLREGKITDKQEGAHSAELAKKVQAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGTDGSLENRLKRLITQAPVVVFMKGSPSNPRCGFSRSLVELLKSEQIAFASFDILEDNEVRQGLKVYSDWKTYPQLYVNGELVGGLDIVKEMVVEGGNSGRLKEELGIKDVPLSSVPSASSAPSSAPSLETRLTALINKAPVMLFMKGDPATPRCGFSNQMVSILQKAGVAFDTFDILSDEEVRQGLKKLSQWPTYPQLYVKGELIGGLDIVKELQETGELESAL 369
            TG VV V S AQ+D A  ++   +V+FFWA++HE  +  GQ+D+V   LA LHP + F +V AE +P++S  F IAVVPTFV  +   + DK EGA+ AELAK+V                                    D +L+ RLK+LI+ +PV++FMKG+P+ P+CGFSR +V LL  E+I F +FDIL D+EVRQGLK +S+W TYPQLYVNG L+GGLDIVKEM  EG     + E+LG+      +V  A +A       +  L AL+N APV+LFMKG P+ P+CGFS + V +L+   +AF +FDILSDE+VRQGLKK S WPTYPQLYVKG+LIGGLDI+ E+ E G+L   L
Sbjct:    5 TGSVVSVQSAAQFDEATARESTLSVSFFWAEFHEACRPNGQLDVVVRQLATLHPRIRFLKVAAEELPELSERFQIAVVPTFVIAQGRAVLDKLEGANVAELAKRVDVLSKSVAKSSSTSTAEEAPKP-------------LDDALQYRLKKLISASPVMLFMKGNPTEPKCGFSRQMVALLNEEKIQFGTFDILNDDEVRQGLKQFSNWPTYPQLYVNGSLIGGLDIVKEMKSEGS----IVEQLGL----TKNVEEAEAA------FQESLRALVNSAPVLLFMKGTPSEPKCGFSKKTVKLLRDHQIAFSSFDILSDEQVRQGLKKFSNWPTYPQLYVKGKLIGGLDILNEMAEDGDLSEQL 341

[Close]

BLAST of NO03G04770 vs. NCBI_GenBank
Match: XP_008894608.1 (Grx4 family monothiol glutaredoxin [Phytophthora parasitica INRA-310] >ETM40993.1 Grx4 family monothiol glutaredoxin [Phytophthora parasitica] >ETN20746.1 Grx4 family monothiol glutaredoxin [Phytophthora parasitica INRA-310] >ETO69650.1 Grx4 family monothiol glutaredoxin [Phytophthora parasitica P1976] >KUF84468.1 Monothiol glutaredoxin-S17 [Phytophthora nicotianae])

HSP 1 Score: 338.6 bits (867), Expect = 2.500e-89
Identity = 182/364 (50.00%), Postives = 238/364 (65.38%), Query Frame = 0

Query:    6 TGRVVDVMSKAQWD-ALLKDGIPAVAFFWADWHEPSKLQGQMDLVFTHLAALHPSLHFFRVEAEAVPDVSVIFSIAVVPTFVFLREGKITDKQEGAHSAELAKKVQAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGTDGSLENRLKRLITQAPVVVFMKGSPSNPRCGFSRSLVELLKSEQIAFASFDILEDNEVRQGLKVYSDWKTYPQLYVNGELVGGLDIVKEMVVEGGNSGRLKEELGIKDVPLSSVPSASSAPSSAPSLETRLTALINKAPVMLFMKGDPATPRCGFSNQMVSILQKAGVAFDTFDILSDEEVRQGLKKLSQWPTYPQLYVKGELIGGLDIVKELQETGELESAL 369
            TG VV V S AQ+D A  ++   +V+FFWA++HE  +  GQ+D+V   LA LHP + F +V AE +P++S  F IAVVPTFV  +   + DK EGA+ AELAK+V             XXX                    D +L+ RLK+LI+ +PV++FMKG+P+ P+CGFSR +V LL  E+I F +FDIL D+EVRQGLK +S+W TYPQLYVNG L+GGLDIVKEM  EG     + E+LG+      +V  A +A       +  L AL+N APV+LFMKG P+ P+CGFS + V +L+   +AF +FDILSDE+VRQGLKK S WPTYPQLYVKG+LIGGLDI+ E+ E G+L   L
Sbjct:    5 TGSVVSVQSAAQFDEATARESTLSVSFFWAEFHEACRPNGQLDVVVRQLATLHPRIRFLKVAAEELPELSERFQIAVVPTFVIAQGRAVLDKLEGANVAELAKRVDVLSKSVAKSSSTXXXTAEEAPKP-----------LDDALQYRLKKLISASPVMLFMKGNPTEPKCGFSRQMVALLNEEKIQFGTFDILNDDEVRQGLKQFSNWPTYPQLYVNGSLIGGLDIVKEMKSEGS----IVEQLGL----TKNVEEAEAA------FQESLRALVNSAPVLLFMKGTPSEPKCGFSKKTVKLLRDHQIAFSSFDILSDEQVRQGLKKFSNWPTYPQLYVKGKLIGGLDILNEMAEDGDLSEQL 343

[Close]

BLAST of NO03G04770 vs. NCBI_GenBank
Match: ETP38898.1 (Grx4 family monothiol glutaredoxin [Phytophthora parasitica P10297])

HSP 1 Score: 338.6 bits (867), Expect = 2.500e-89
Identity = 182/364 (50.00%), Postives = 238/364 (65.38%), Query Frame = 0

Query:    6 TGRVVDVMSKAQWD-ALLKDGIPAVAFFWADWHEPSKLQGQMDLVFTHLAALHPSLHFFRVEAEAVPDVSVIFSIAVVPTFVFLREGKITDKQEGAHSAELAKKVQAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGTDGSLENRLKRLITQAPVVVFMKGSPSNPRCGFSRSLVELLKSEQIAFASFDILEDNEVRQGLKVYSDWKTYPQLYVNGELVGGLDIVKEMVVEGGNSGRLKEELGIKDVPLSSVPSASSAPSSAPSLETRLTALINKAPVMLFMKGDPATPRCGFSNQMVSILQKAGVAFDTFDILSDEEVRQGLKKLSQWPTYPQLYVKGELIGGLDIVKELQETGELESAL 369
            TG VV V S AQ+D A  ++   +V+FFWA++HE  +  GQ+D+V   LA LHP + F +V AE +P++S  F IAVVPTFV  +   + DK EGA+ AELAK+V             XXX                    D +L+ RLK+LI+ +PV++FMKG+P+ P+CGFSR +V LL  E+I F +FDIL D+EVRQGLK +S+W TYPQLYVNG L+GGLDIVKEM  EG     + E+LG+      +V  A +A       +  L AL+N APV+LFMKG P+ P+CGFS + V +L+   +AF +FDILSDE+VRQGLKK S WPTYPQLYVKG+LIGGLDI+ E+ E G+L   L
Sbjct:    5 TGSVVSVQSAAQFDEATARESTLSVSFFWAEFHEACRPNGQLDVVVRQLATLHPRIRFLKVAAEELPELSERFQIAVVPTFVIAQGRAVLDKLEGANVAELAKRVDVLSKSVAKSSSTXXXTAEEAPKP-----------LDDALQYRLKKLISASPVMLFMKGNPTEPKCGFSRQMVALLNEEKIQFGTFDILNDDEVRQGLKQFSNWPTYPQLYVNGSLIGGLDIVKEMKSEGS----IVEQLGL----TKNVEEAEAA------FQESLRALVNSAPVLLFMKGTPSEPKCGFSKKTVKLLRDHQIAFSSFDILSDEQVRQGLKKFSNWPTYPQLYVKGKLIGGLDILNEMAEDGDLSEQL 343

[Close]

BLAST of NO03G04770 vs. NCBI_GenBank
Match: GAX97944.1 (Grx4 family monothiol glutaredoxin [Pythium insidiosum])

HSP 1 Score: 338.2 bits (866), Expect = 3.200e-89
Identity = 202/366 (55.19%), Postives = 253/366 (69.13%), Query Frame = 0

Query:    4 SSTGRVVDVMSKAQWDAL-LKDGIPAVAFFWADWHEPSKLQGQMDLVFTHLAALHPSLHFFRVEAEAVPDVSVIFSIAVVPTFVFLREGKITDKQEGAHSAELAKKVQAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGTDGSLENRLKRLITQAPVVVFMKGSPSNPRCGFSRSLVELLKSEQIAFASFDILEDNEVRQGLKVYSDWKTYPQLYVNGELVGGLDIVKEMVVEGGNSGRLKEELGIKDVPLSSVPSASSAPSSAPSLETRLTALINKAPVMLFMKGDPATPRCGFSNQMVSILQKAGVAFDTFDILSDEEVRQGLKKLSQWPTYPQLYVKGELIGGLDIVKELQETGELESAL 369
            ++ G VVDV   AQ+D L  ++   +++FFWA++HE  +  GQ+D+VF  LA LHP + F +V AE V ++S  F IAVVPTFV  +   + +K EGA+ AELAK+V           XXXXXXXXXXXXXXXXXXXXX    D +LE RLK+LI  +PV++FMKGSPS P+CGFSR +V LL +E I F +FDIL DN+VRQGLK +S+W TYPQLYVNG L+GGLDIVKEM  EG     L E LG+      SV  A +A       +  L AL+N APV+LFMKG P  P+CGFS + V +L+   + F +FDILSDE+VRQGLKK S WPTYPQLYV+G+LIGGLDI+ E+ E GEL   L
Sbjct:    5 ATPGTVVDVQDVAQFDELTARETTLSISFFWAEFHELCRPNGQIDVVFKQLATLHPRIRFLKVAAEDVAELSERFQIAVVPTFVVAQGKSVLEKLEGANVAELAKRVDVL--SKSLAKXXXXXXXXXXXXXXXXXXXXXAAPVDAALEYRLKKLINASPVMLFMKGSPSEPKCGFSRQIVALLNAENIQFGTFDILNDNDVRQGLKQFSNWPTYPQLYVNGSLIGGLDIVKEMKAEGS----LVEHLGLS----KSVEEAEAA------FQESLRALVNSAPVLLFMKGSPQEPKCGFSKKTVKLLRDHHIPFSSFDILSDEQVRQGLKKFSNWPTYPQLYVRGKLIGGLDILNEMAEDGELSEQL 354

[Close]

BLAST of NO03G04770 vs. NCBI_GenBank
Match: XP_002903619.1 (glutaredoxin, putative [Phytophthora infestans T30-4] >EEY55395.1 glutaredoxin, putative [Phytophthora infestans T30-4])

HSP 1 Score: 337.8 bits (865), Expect = 4.200e-89
Identity = 178/364 (48.90%), Postives = 234/364 (64.29%), Query Frame = 0

Query:    6 TGRVVDVMSKAQWD-ALLKDGIPAVAFFWADWHEPSKLQGQMDLVFTHLAALHPSLHFFRVEAEAVPDVSVIFSIAVVPTFVFLREGKITDKQEGAHSAELAKKVQAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGTDGSLENRLKRLITQAPVVVFMKGSPSNPRCGFSRSLVELLKSEQIAFASFDILEDNEVRQGLKVYSDWKTYPQLYVNGELVGGLDIVKEMVVEGGNSGRLKEELGIKDVPLSSVPSASSAPSSAPSLETRLTALINKAPVMLFMKGDPATPRCGFSNQMVSILQKAGVAFDTFDILSDEEVRQGLKKLSQWPTYPQLYVKGELIGGLDIVKELQETGELESAL 369
            TG VV V S AQ+D A  ++   +V+FFWA++HE  +  GQ+D+V   LA LHP + F +V AE +P++S  F IAVVPTFV  +   + DK EGA+ AELAK+V                                    D +LE RLK+LI+ +PV++FMKG+P+ P+CGFSR +V LL  E+I F +FDIL D+EVRQGLK +S+W TYPQLYVNG L+GGLDIVKEM  EG     + E+LG+      +V  A +A       +  L AL+N APV+LFMKG P+ P+CGFS + V +L+   + F +FDILSDE+VRQGLKK S WPTYPQLYVKG+L+GGLDI+ E+ E G+L   L
Sbjct:    5 TGSVVSVQSVAQFDEATARESTLSVSFFWAEFHEACRPNGQLDVVVRQLATLHPRIRFLKVAAEEIPELSERFQIAVVPTFVVAQGRAVLDKLEGANVAELAKRVDVLSKSVAKSSSTSASTAEDAPKP-----------LDDALEYRLKKLISASPVMLFMKGNPTEPKCGFSRQMVALLNEEKIQFGTFDILNDDEVRQGLKQFSNWPTYPQLYVNGSLIGGLDIVKEMKSEGS----IVEQLGL----TKNVEEAEAA------FQESLRALVNSAPVLLFMKGHPSEPKCGFSKKTVKLLRDHQIGFSSFDILSDEQVRQGLKKFSNWPTYPQLYVKGKLVGGLDILNEMAEDGDLSEQL 343

[Close]

BLAST of NO03G04770 vs. NCBI_GenBank
Match: ETL87752.1 (Grx4 family monothiol glutaredoxin [Phytophthora parasitica])

HSP 1 Score: 337.0 bits (863), Expect = 7.200e-89
Identity = 182/364 (50.00%), Postives = 237/364 (65.11%), Query Frame = 0

Query:    6 TGRVVDVMSKAQWD-ALLKDGIPAVAFFWADWHEPSKLQGQMDLVFTHLAALHPSLHFFRVEAEAVPDVSVIFSIAVVPTFVFLREGKITDKQEGAHSAELAKKVQAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGTDGSLENRLKRLITQAPVVVFMKGSPSNPRCGFSRSLVELLKSEQIAFASFDILEDNEVRQGLKVYSDWKTYPQLYVNGELVGGLDIVKEMVVEGGNSGRLKEELGIKDVPLSSVPSASSAPSSAPSLETRLTALINKAPVMLFMKGDPATPRCGFSNQMVSILQKAGVAFDTFDILSDEEVRQGLKKLSQWPTYPQLYVKGELIGGLDIVKELQETGELESAL 369
            TG VV V S AQ+D A  ++   +V+FFWA++HE  +  GQ+D+V   LA LHP + F +V AE +P++S  F IAVVPTFV  +   + DK EGA+ AELAK+V             XXX                    D +L+ RLK+LI+ +PV++FMKG+P+ P+CGFSR +V LL  E+I F +FDIL D EVRQGLK +S+W TYPQLYVNG L+GGLDIVKEM  EG     + E+LG+      +V  A +A       +  L AL+N APV+LFMKG P+ P+CGFS + V +L+   +AF +FDILSDE+VRQGLKK S WPTYPQLYVKG+LIGGLDI+ E+ E G+L   L
Sbjct:    5 TGSVVSVQSAAQFDEATARESTLSVSFFWAEFHEACRPNGQLDVVVRQLATLHPRIRFLKVAAEELPELSERFQIAVVPTFVIAQGRAVLDKLEGANVAELAKRVDVLSKSVAKSSSTXXXTAEEAPKP-----------LDDALQYRLKKLISASPVMLFMKGNPTEPKCGFSRQMVALLNEEKIQFGTFDILNDVEVRQGLKQFSNWPTYPQLYVNGSLIGGLDIVKEMKSEGS----IVEQLGL----TKNVEEAEAA------FQESLRALVNSAPVLLFMKGTPSEPKCGFSKKTVKLLRDHQIAFSSFDILSDEQVRQGLKKFSNWPTYPQLYVKGKLIGGLDILNEMAEDGDLSEQL 343

[Close]

BLAST of NO03G04770 vs. NCBI_GenBank
Match: OWZ01543.1 (Grx4 family monothiol glutaredoxin [Phytophthora megakarya])

HSP 1 Score: 335.5 bits (859), Expect = 2.100e-88
Identity = 177/364 (48.63%), Postives = 234/364 (64.29%), Query Frame = 0

Query:    6 TGRVVDVMSKAQWD-ALLKDGIPAVAFFWADWHEPSKLQGQMDLVFTHLAALHPSLHFFRVEAEAVPDVSVIFSIAVVPTFVFLREGKITDKQEGAHSAELAKKVQAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGTDGSLENRLKRLITQAPVVVFMKGSPSNPRCGFSRSLVELLKSEQIAFASFDILEDNEVRQGLKVYSDWKTYPQLYVNGELVGGLDIVKEMVVEGGNSGRLKEELGIKDVPLSSVPSASSAPSSAPSLETRLTALINKAPVMLFMKGDPATPRCGFSNQMVSILQKAGVAFDTFDILSDEEVRQGLKKLSQWPTYPQLYVKGELIGGLDIVKELQETGELESAL 369
            TG VV V S AQ+D A  ++   +V+FFWA++HE  +  GQ+D+V   LA LHP + F +V AE + ++S  F IAVVPTFV  +   + DK EGA+ AELAK+V                                    D +L+ RLK+LI+ +PV++FMKG+P+ P+CGFSR +V LL  ++I F +FDIL+D+EVRQGLK +SDW TYPQLYVNG LVGGLDI+KEM  EG     + E+LG+      +V  A +A       +  L AL+N APV+LFMKG P+ P+CGFS + V +L+   +AF +FDILSDE+VRQGLKK S WPTYPQLYVKG L+GGLDI+ E+ E G+L   L
Sbjct:    5 TGSVVSVQSVAQFDEATARESTLSVSFFWAEFHEACRPNGQLDVVVRQLATLHPRIRFLKVAAEELSELSERFQIAVVPTFVIAQGRAVLDKLEGANVAELAKRVDVLSKSVAKNTSTTSEDAPKP--------------LDDALQYRLKKLISASPVMLFMKGNPTEPKCGFSRQMVALLNEDKIQFGTFDILQDDEVRQGLKQFSDWPTYPQLYVNGSLVGGLDILKEMKAEGS----IVEQLGL----TKNVEEAEAA------FQESLRALVNSAPVLLFMKGTPSDPKCGFSKKTVKLLRDHQIAFSSFDILSDEQVRQGLKKFSNWPTYPQLYVKGTLVGGLDILNEMAEEGDLSEQL 340

[Close]

BLAST of NO03G04770 vs. NCBI_GenBank
Match: XP_024573889.1 (grx4 family monothiol glutaredoxin [Plasmopara halstedii] >CEG37520.1 grx4 family monothiol glutaredoxin [Plasmopara halstedii])

HSP 1 Score: 333.6 bits (854), Expect = 8.000e-88
Identity = 173/364 (47.53%), Postives = 233/364 (64.01%), Query Frame = 0

Query:    6 TGRVVDVMSKAQWD-ALLKDGIPAVAFFWADWHEPSKLQGQMDLVFTHLAALHPSLHFFRVEAEAVPDVSVIFSIAVVPTFVFLREGKITDKQEGAHSAELAKKVQAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGTDGSLENRLKRLITQAPVVVFMKGSPSNPRCGFSRSLVELLKSEQIAFASFDILEDNEVRQGLKVYSDWKTYPQLYVNGELVGGLDIVKEMVVEGGNSGRLKEELGIKDVPLSSVPSASSAPSSAPSLETRLTALINKAPVMLFMKGDPATPRCGFSNQMVSILQKAGVAFDTFDILSDEEVRQGLKKLSQWPTYPQLYVKGELIGGLDIVKELQETGELESAL 369
            TG VV V S AQ+D A  ++   +V FFWAD+H+  +  GQ+D+V   LA LHP + FF+V AE +P++S  F I VVPTFV  +   + DK E A+ A+LAK+V                                    D +L+ RL++LI+ +PV++FMKG+PS P+CGFSR +V LL  E+I F SFDIL D++VRQGLK YS+W TYPQLYVNG+LVGGLDI+ EM  EG  + +LK +  +++              +  + E  L AL+N APV+LFMKG P+ P+CGFS + V +L++  +AF +FDILSD++VRQGLKK S WPTYPQLYVKG+LIGGLDI+ E+ E G+L   L
Sbjct:    5 TGSVVIVQSIAQFDEATARESTISVTFFWADFHDACRPNGQLDVVVRQLATLHPRIRFFKVAAEELPELSERFQIEVVPTFVIAQGRSVLDKLENANVADLAKRVDVL------------SKSVVQNSTLAATTKEPAKALDEALQYRLQKLISASPVMLFMKGNPSEPKCGFSRQIVALLNDEKIQFGSFDILNDDQVRQGLKEYSNWPTYPQLYVNGKLVGGLDILNEMKSEGSIAEQLKLKKNVEE--------------AEAAFEEGLRALVNSAPVLLFMKGTPSEPKCGFSQKTVKLLREHEIAFSSFDILSDDQVRQGLKKFSNWPTYPQLYVKGKLIGGLDILNEMAEDGDLSEQL 342

The following BLAST results are available for this feature:

BLAST of NO03G04770 vs. NCBI_GenBank

BLAST of NO03G04770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM29897.1	5.100e-143	70.54	glutaredoxin 3 [Nannochloropsis gaditana]	[more]
ETI40977.1	2.500e-89	50.00	Grx4 family monothiol glutaredoxin [Phytophthora p...	[more]
ETK81081.1	2.500e-89	49.18	Grx4 family monothiol glutaredoxin [Phytophthora p...	[more]
XP_008894608.1	2.500e-89	50.00	Grx4 family monothiol glutaredoxin [Phytophthora p...	[more]
ETP38898.1	2.500e-89	50.00	Grx4 family monothiol glutaredoxin [Phytophthora p...	[more]
GAX97944.1	3.200e-89	55.19	Grx4 family monothiol glutaredoxin [Pythium insidi...	[more]
XP_002903619.1	4.200e-89	48.90	glutaredoxin, putative [Phytophthora infestans T30...	[more]
ETL87752.1	7.200e-89	50.00	Grx4 family monothiol glutaredoxin [Phytophthora p...	[more]
OWZ01543.1	2.100e-88	48.63	Grx4 family monothiol glutaredoxin [Phytophthora m...	[more]
XP_024573889.1	8.000e-88	47.53	grx4 family monothiol glutaredoxin [Plasmopara hal...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL069	nonsL069	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR000	ncniR000	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR054	ngnoR054	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK005406	NSK005406	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO03G04770.1	NO03G04770.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|573084	gene_1683	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100035g19	gene726	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO03G04770.1	NO03G04770.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO03G04770 ID=NO03G04770|Name=NO03G04770|organism=Nannochloropsis oceanica|type=gene|length=2792bp
ATTGAAAGCTCGGCTCGCAACTTCATACTTTTACACTCGTTCATGTTAGA
AAAGCATGTGCGGAAATTGGGGTGTGTTCGACTCCGCACCCGTAACTAGC
AGCCATTCTTAAATATTCATTTGAGATTTCTACGTAAGTGCTGGCCCAGG
TGTGTGTTCGACGGGGAGGATAACCTTAAATAGCAAAGGCATCCTTAAAT
AGCGAAAGAAACCCTAAAATTGCGAAAGCAAGCCCATTCACAAGCATAAG
CGAGACCCAGGAGTCCATTATCAACATGTCCATGTGTTTCTTGTCCTCCT
GCCAAGTGGCCCCCAAGGGCCCAATAATTTAAAACTCTTTAAATTCTCAC
ATGCAAGGCTTCAAGGCATTTGCCAACATGATGCCCTTTACGACCTCTTC
TTTCCTCTTTCCTCACACAGACACATTCACATACACAAAATTGTCTTGAG
GAGTCTGCGAAGGCAGAGTGGCGCTTGGTCTATCCAACATGGACCCACAC
ATGATGGATGTTGATGACAAAGACAACATCGTGATCGTCGTGGCCCTTCC
GTACATGTACCTCTTTGAAGGACACTAGCTTCCCAGTGCGTCTTGGAATC
TGAATCCAAACCGACCTCGTACATAGCCGCAGCTCTTCGACGACTTTGCT
GATGATATGTTCCTGACGATGCACCGGTTTACCAAGGAGCAGGTGTGGTA
CCATGCTCCGTATGGTACATGCTCCCCAGACTCCGCATCGACACAGTTGT
CGAGTTAGAAGGGTAAGCACTTATGGCTAATGTTGACTGTCTTGCACACG
CTAATCTTCCCAAAGGCACAGGCTGTGGTTCTAGACCTTTAACTGGCTCT
CCCCCTCTCGTACCGTTTACCTCATCGCCCGCCTAATAACATGGGAAGGA
TGCAAAAAATGTGTGGAGGGATGGTGTTTGTGATGCCTCTTGGCCGCAAT
GCCCATCCTTACTCTACTCGAGGCGCATTGGAAAAAGTTGTACGGACATG
ACCGCACACAAATAACAAAATGGACAAATTACATGCTGGAGTACCTCGGC
AACTGCGCATCATATCGCCCATCGCTTGTTCCCGGTCCTTCTTCCGGTTT
GCTTCCCTCGCAAAGTCACGCTGCGCAAACAACACACAAACCCACAGCAC
CTCATCGCGACCATCACTATGGAGGGAAGCAGCACCGGTCGGGTTGTCGA
CGTCATGTCCAAGGCGCAATGGGATGCCTTGCTCAAAGgtaaagttttga
tggtgatggtgatgacgacgaagcttgtccccatatagaacaaattgcac
tgggtgcctcttactggcagcgaagcgccctttcaaagtcccacgcccgt
agccacacatactatctacatctgtgagtatcgcgatgcctttccgtggt
cgtattagtcctccacaagcaccataatccccatccactagcagcacagc
acatacatgcactacagcgtgatagtaccattcacaggagtcaagcagtc
gagcgttatctcggcatgacatggtagacgcgttatgcttctgttgggcg
tggttgatgctactgctatcattttttgtgtgtaaaaatggcacttaacc
cccctaacttttcagcatttttttcgcacccatccttctaacctatacca
tctccaccacacaagATGGCATCCCTGCCGTTGCCTTCTTCTGGGCCGAC
TGGCACGAACCATCCAAGCTTCAAGGGCAAATGGACTTAGTTTTCACGCA
CCTCGCCGCTCTTCACCCCTCTCTCCACTTTTTCCGGGTGGAGGCCGAGG
CCGTACCAGACGTCTCCGTCATCTTTAGCATAGCCGTCGTTCCCACCTTC
GTCTTTCTCCGGGAAGGCAAGATTACAGACAAACAAGAAGGAGCACACTC
TGCCGAGCTAGCTAAGAAAGTCCAGGCTTTTGCCGCAGCAGCTGCTTCCT
TGCCACCCCCCACTTCCGCCGGTGTCGACGCTTCCATACAGCAGCAGCAG
CAGCAACAGCAGCAACCTCTCACTGGCACGGACGGCAGCCTTGAGAACCG
TCTCAAGCGGTTAATCACCCAAGCTCCCGTGGTGGTCTTTATGAAGGGCT
CTCCCTCAAACCCTCGTTGCGGCTTCTCCCGCTCGCTTGTCGAGCTGCTT
AAATCTGAACAAATCGCCTTTGCCTCTTTCGACATTTTGGAAGACAATGA
GGTGAGACAAGGGTTGAAAGTCTACTCGGACTGGAAGACCTACCCTCAGC
TTTACGTCAACGGCGAGCTCGTAGGTGGGTTAGACATAGTGAAAGAAATG
GTGGTGGAGGGAGGGAACTCGGGTCGCCTCAAGGAAGAGCTGGGCATTAA
GGACGTCCCTCTTTCCTCCGTTCCCTCCGCCTCTTCTGCCCCCTCCTCCG
CCCCCTCCCTCGAAACCCGCCTCACGGCGCTTATCAACAAGGCCCCAGTC
ATGCTCTTTATGAAAGGAGATCCCGCGACACCCAGGTGTGGGTTTAGCAA
CCAGATGGTATCGATTTTGCAAAAAGCAGGCGTGGCCTTTGATACCTTCG
ACATCCTTAGCGACGAGGAAGTGAGGCAAGGGTTGAAGAAGCTCTCGCAG
TGGCCGACCTATCCCCAGTTGTACGTGAAAGGGGAATTGATCGGAGGGTT
GGACATTGTGAAGGAACTGCAGGAGACGGGGGAGTTAGAGAGTGCCTTGA
AGGGTTAGAGGGGAGGGAGGGAGGGAAGGGGAAGGGAGGGATGCAAGGAA
GGGAGGATATTGAAATGAAGGAAGAGGAGTAACAAAGTGCAC

protein sequence of NO03G04770.1

>NO03G04770.1-protein ID=NO03G04770.1-protein|Name=NO03G04770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=371bp
MEGSSTGRVVDVMSKAQWDALLKDGIPAVAFFWADWHEPSKLQGQMDLVF
THLAALHPSLHFFRVEAEAVPDVSVIFSIAVVPTFVFLREGKITDKQEGA
HSAELAKKVQAFAAAAASLPPPTSAGVDASIQQQQQQQQQPLTGTDGSLE
NRLKRLITQAPVVVFMKGSPSNPRCGFSRSLVELLKSEQIAFASFDILED
NEVRQGLKVYSDWKTYPQLYVNGELVGGLDIVKEMVVEGGNSGRLKEELG
IKDVPLSSVPSASSAPSSAPSLETRLTALINKAPVMLFMKGDPATPRCGF
SNQMVSILQKAGVAFDTFDILSDEEVRQGLKKLSQWPTYPQLYVKGELIG
GLDIVKELQETGELESALKG*

Synonyms

Publications