NO03G04650, NO03G04650 (gene) Nannochloropsis oceanica

Overview
NameNO03G04650
Unique NameNO03G04650
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1650
Alignment locationchr3:1331391..1333040 -

Link to JBrowse

Properties
Property NameValue
DescriptionAminoacyl-tRNA synthetase, class Ic
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1331391..1333040 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR002305aa-tRNA-synth_Ic
Homology
BLAST of NO03G04650 vs. NCBI_GenBank
Match: EWM29924.1 (Aminoacyl-tRNA synthetase, class Ic [Nannochloropsis gaditana])

HSP 1 Score: 707.6 bits (1825), Expect = 2.300e-200
Identity = 347/427 (81.26%), Postives = 378/427 (88.52%), Query Frame = 0
Query:    1 MSVDQRFSVQATACFTVLEAPGVTQKXXXXXXXXXXXXXXXXXXXKISSSIAIGSLVNISGSGKRGPSGLIEGKEYYVSTLPLDEKFTLARSVGEECIQEEELRSLLEKKPHPVVYDGFEPSGRMHIAQGVMRAINVNKLTQCGCVFKFWVADWFALLNNKMGGDLKKIQTVGKYMIEIWRAVGMDMRNVEFLWASEEINAHSNEYWSRVMDIARLNNLARIQRCCTIMGRKDTEEMSAAQVMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDSVKIKFKPVILSHHMLMGLKEGQEKMSKSDPDSAIFMEDSEADLKRKIKKAFCPPEVVDGNPIVDYVKHIVFGYYGKIVIAFHGGESEEYTEYEKFEADYLSGKIHPGDLKPAVTVAINSILEPVRKHFETDAEAKKLLEQVKKFKTTR 428
            MSVD+RFSVQATA F+VLEAPG TQ+                     SS+++ G L +  G+  RG +GLIEGKEY+VS L  D K+ LARSVGEECIQE+ELR LLEKKPHP+VYDGFEPSGRMHIAQGVMRAIN NKLTQCGCVFKFWVADWFALLNNKMGGDLKKIQTVG+YMIEIWRAVGMDM+NVEFLWASEEINAHS+EYWSRVMDIAR+NNLARIQRCCTIMGRKDTEEMSAAQ+MYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDSVKIKFKPVI+SHHMLMGLKEGQEKMSKSDPDSAIFMEDSEADLKRKIKKAFCPPEV++GNPI+DYVKHI+FGYYGKI I F G   +EY +YE+FEADY  GKIHPGDLKPAVT+A+NSILEPVRKHFE+D  AKKLL+QVKK+KTTR
Sbjct:    1 MSVDKRFSVQATARFSVLEAPGGTQR-----SSTSSSQGAHNNTKSTSSTVSHGPL-SAGGTITRGANGLIEGKEYFVSPLSADAKYALARSVGEECIQEQELRLLLEKKPHPIVYDGFEPSGRMHIAQGVMRAINANKLTQCGCVFKFWVADWFALLNNKMGGDLKKIQTVGRYMIEIWRAVGMDMQNVEFLWASEEINAHSDEYWSRVMDIARINNLARIQRCCTIMGRKDTEEMSAAQIMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDSVKIKFKPVIISHHMLMGLKEGQEKMSKSDPDSAIFMEDSEADLKRKIKKAFCPPEVIEGNPIIDYVKHIIFGYYGKIEIEFQGNVRKEYVDYEEFEADYKGGKIHPGDLKPAVTMALNSILEPVRKHFESDPVAKKLLDQVKKYKTTR 421          
BLAST of NO03G04650 vs. NCBI_GenBank
Match: EWM29925.1 (Aminoacyl-tRNA synthetase, class Ic [Nannochloropsis gaditana])

HSP 1 Score: 681.0 bits (1756), Expect = 2.400e-192
Identity = 326/380 (85.79%), Postives = 354/380 (93.16%), Query Frame = 0
Query:   48 SSSIAIGSLVNISGSGKRGPSGLIEGKEYYVSTLPLDEKFTLARSVGEECIQEEELRSLLEKKPHPVVYDGFEPSGRMHIAQGVMRAINVNKLTQCGCVFKFWVADWFALLNNKMGGDLKKIQTVGKYMIEIWRAVGMDMRNVEFLWASEEINAHSNEYWSRVMDIARLNNLARIQRCCTIMGRKDTEEMSAAQVMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDSVKIKFKPVILSHHMLMGLKEGQEKMSKSDPDSAIFMEDSEADLKRKIKKAFCPPEVVDGNPIVDYVKHIVFGYYGKIVIAFHGGESEEYTEYEKFEADYLSGKIHPGDLKPAVTVAINSILEPVRKHFETDAEAKKLLEQVKKFKTTR 428
            SS+++ G L +  G+  RG +GLIEGKEY+VS L  D K+ LARSVGEECIQE+ELR LLEKKPHP+VYDGFEPSGRMHIAQGVMRAIN NKLTQCGCVFKFWVADWFALLNNKMGGDLKKIQTVG+YMIEIWRAVGMDM+NVEFLWASEEINAHS+EYWSRVMDIAR+NNLARIQRCCTIMGRKDTEEMSAAQ+MYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDSVKIKFKPVI+SHHMLMGLKEGQEKMSKSDPDSAIFMEDSEADLKRKIKKAFCPPEV++GNPI+DYVKHI+FGYYGKI I F G   +EY +YE+FEADY  GKIHPGDLKPAVT+A+NSILEPVRKHFE+D  AKKLL+QVKK+KTTR
Sbjct:   64 SSTVSHGPL-SAGGTITRGANGLIEGKEYFVSPLSADAKYALARSVGEECIQEQELRLLLEKKPHPIVYDGFEPSGRMHIAQGVMRAINANKLTQCGCVFKFWVADWFALLNNKMGGDLKKIQTVGRYMIEIWRAVGMDMQNVEFLWASEEINAHSDEYWSRVMDIARINNLARIQRCCTIMGRKDTEEMSAAQIMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDSVKIKFKPVIISHHMLMGLKEGQEKMSKSDPDSAIFMEDSEADLKRKIKKAFCPPEVIEGNPIIDYVKHIIFGYYGKIEIEFQGNVRKEYVDYEEFEADYKGGKIHPGDLKPAVTMALNSILEPVRKHFESDPVAKKLLDQVKKYKTTR 442          
BLAST of NO03G04650 vs. NCBI_GenBank
Match: XP_009842365.1 (tyrosine-tRNA ligase [Aphanomyces astaci] >ETV68066.1 tyrosine-tRNA ligase [Aphanomyces astaci])

HSP 1 Score: 552.0 bits (1421), Expect = 1.600e-153
Identity = 264/364 (72.53%), Postives = 311/364 (85.44%), Query Frame = 0
Query:   68 SGLIEGKEYYVSTLPLDEKFTLARSVGEECIQEEELRSLLEKKPHPVVYDGFEPSGRMHIAQGVMRAINVNKLTQCGCVFKFWVADWFALLNNKMGGDLKKIQTVGKYMIEIWRAVGMDMRNVEFLWASEEINAHSNEYWSRVMDIARLNNLARIQRCCTIMGRKDTEEMSAAQVMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDSVKIKFKPVILSHHMLMGLKEGQEKMSKSDPDSAIFMEDSEADLKRKIKKAFCPPEVVDGNPIVDYVKHIVFGYYGKIVIA----FHGGESEEYTEYEKFEADYLSGKIHPGDLKPAVTVAINSILEPVRKHFETDAEAKKLLEQVKKFKTTR 428
            S L E +++  S L LDE+F L +SVGEECI+EEELR LLEKK HP+ YDGFEPSGRMHIAQGV+R INVNKLT  GC+F+FWVADWFALLNNKMGGDLKKI+ VG+YMIEIW+AVGM+M NV+FLWAS+EIN+H++EYW+RV+D+AR  N+ARIQRCCTIMGRK+ ++MSAAQ+MYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCD  KIKFKPVI+SHHMLMGLK+GQEKMSKSDPDSAIFMED+ +D+ RKIKKA+CPP  VDGNPI+DY+KHI+F  +   V+      +GG+ + Y EY++   DYLS  IHPGDLKPA+T  +N ILEPVRKHFE   EAKKLL ++KKFK TR
Sbjct:   49 SRLHEVRDWKKSALSLDERFELCKSVGEECIKEEELRVLLEKKEHPICYDGFEPSGRMHIAQGVLRMINVNKLTSAGCIFRFWVADWFALLNNKMGGDLKKIRKVGQYMIEIWKAVGMNMDNVQFLWASDEINSHADEYWTRVIDVARKFNVARIQRCCTIMGRKEADDMSAAQMMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDEAKIKFKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTASDVSRKIKKAYCPPAQVDGNPIMDYMKHIIFPMFPDGVVVKRKEDYGGD-KTYVEYDEMVVDYLSEAIHPGDLKPALTEYLNQILEPVRKHFE-QGEAKKLLAEIKKFKVTR 410          
BLAST of NO03G04650 vs. NCBI_GenBank
Match: XP_008873065.1 (tyrosine-tRNA ligase [Aphanomyces invadans] >ETV98190.1 tyrosine-tRNA ligase [Aphanomyces invadans])

HSP 1 Score: 550.8 bits (1418), Expect = 3.700e-153
Identity = 263/363 (72.45%), Postives = 310/363 (85.40%), Query Frame = 0
Query:   68 SGLIEGKEYYVSTLPLDEKFTLARSVGEECIQEEELRSLLEKKPHPVVYDGFEPSGRMHIAQGVMRAINVNKLTQCGCVFKFWVADWFALLNNKMGGDLKKIQTVGKYMIEIWRAVGMDMRNVEFLWASEEINAHSNEYWSRVMDIARLNNLARIQRCCTIMGRKDTEEMSAAQVMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDSVKIKFKPVILSHHMLMGLKEGQEKMSKSDPDSAIFMEDSEADLKRKIKKAFCPPEVVDGNPIVDYVKHIVFGYYGKIVIAFHG---GESEEYTEYEKFEADYLSGKIHPGDLKPAVTVAINSILEPVRKHFETDAEAKKLLEQVKKFKTTR 428
            S L E +++  STL LDE+F L +SVGEECI+EEELR+LLEKK HP+ YDGFEPSGRMHIAQGV+R INVNKLT  GC+F+FWVADWFALLNNKMGGDLKKI+ VG+YMIEIW+AVGM+M NV+FLWAS+EINAH++EYW+RV+D+AR  N+ARIQRCCTIMGRK+ ++MSAAQ+MYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCD  KIKFKPVI+SHHMLMGLK+GQEKMSKSDPDSAIFMED+ +D+ RKIKKA+CPP  VDGNPI+DY+KHI+F  +   V+       G  + Y  Y++  ADYL+  IHPGDLKP++T  +N ILEPVRKHFE   EAKKLL ++KKFK TR
Sbjct:   49 SRLHEVRDWKKSTLTLDERFELCKSVGEECIKEEELRALLEKKEHPICYDGFEPSGRMHIAQGVLRMINVNKLTSAGCIFRFWVADWFALLNNKMGGDLKKIRKVGQYMIEIWKAVGMNMDNVQFLWASDEINAHADEYWTRVIDVARKFNVARIQRCCTIMGRKEADDMSAAQMMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDEAKIKFKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTVSDVSRKIKKAYCPPGEVDGNPIMDYMKHIIFPMFPDGVVVKRKEEFGGDKTYLTYDEMAADYLAEAIHPGDLKPSLTEHLNLILEPVRKHFE-QGEAKKLLAEIKKFKITR 410          
BLAST of NO03G04650 vs. NCBI_GenBank
Match: CBJ30608.1 (Tyrosine--tRNA ligase [Ectocarpus siliculosus])

HSP 1 Score: 538.9 bits (1387), Expect = 1.400e-149
Identity = 256/351 (72.93%), Postives = 295/351 (84.05%), Query Frame = 0
Query:   79 STLPLDEKFTLARSVGEECIQEEELRSLLEKKPHPVVYDGFEPSGRMHIAQGVMRAINVNKLTQCGCVFKFWVADWFALLNNKMGGDLKKIQTVGKYMIEIWRAVGMDMRNVEFLWASEEINAHSNEYWSRVMDIARLNNLARIQRCCTIMGRKDTEEMSAAQVMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDSV--KIKFKPVILSHHMLMGLKEGQEKMSKSDPDSAIFMEDSEADLKRKIKKAFCPPEVVDGNPIVDYVKHIVFGYYGKIVIAFHGGESEEYTEYEKFEADYLSGKIHPGDLKPAVTVAINSILEPVRKHFETDAEAKKLLEQVKKFKTTR 428
            S   L+E++ L RSV +ECIQEEEL+ LLE + HP+ YDGFEPSGRMHIAQGVMR INVNKLT+ GC FKFWVADWFA LNNKMGGDLKKIQTVGKYMIEIW+A GMDM NVEFLWASEEIN    EYW RVM++ARLNNL+R+QRC  IMGR +  EMS+AQ+ YPCMQCADVFFLKADICQLGLDQRKVNMLAREYCD    KIKFKPVILSHHML GLKEGQ KMSKSDPDSAIFMED+ AD+KRKIKKA+CPPEVV+GNP++DY KH++F + G++ I+F  GE   YT Y+  E D++SGKIHP +LKPAVT A+N+IL+PVR HF    +AKKLL+ V+K+K TR
Sbjct:   80 SECSLEERYELCRSVADECIQEEELKRLLEARAHPICYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWKATGMDMNNVEFLWASEEINRRPAEYWGRVMEVARLNNLSRVQRCGQIMGRAEAGEMSSAQIFYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDMTKPKIKFKPVILSHHMLAGLKEGQAKMSKSDPDSAIFMEDTAADVKRKIKKAYCPPEVVEGNPVLDYCKHLLFAWSGELTISFREGEPITYTSYDDMEKDFVSGKIHPSELKPAVTDALNAILQPVRDHF-AKGDAKKLLDTVRKYKVTR 429          
BLAST of NO03G04650 vs. NCBI_GenBank
Match: OQS04446.1 (tyrosyl-tRNA synthetase [Thraustotheca clavata])

HSP 1 Score: 536.2 bits (1380), Expect = 9.400e-149
Identity = 253/363 (69.70%), Postives = 307/363 (84.57%), Query Frame = 0
Query:   68 SGLIEGKEYYVSTLPLDEKFTLARSVGEECIQEEELRSLLEKKPHPVVYDGFEPSGRMHIAQGVMRAINVNKLTQCGCVFKFWVADWFALLNNKMGGDLKKIQTVGKYMIEIWRAVGMDMRNVEFLWASEEINAHSNEYWSRVMDIARLNNLARIQRCCTIMGRKDTEEMSAAQVMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDSVKIKFKPVILSHHMLMGLKEGQEKMSKSDPDSAIFMEDSEADLKRKIKKAFCPPEVVDGNPIVDYVKHIVFGYYGKIVIAFHG---GESEEYTEYEKFEADYLSGKIHPGDLKPAVTVAINSILEPVRKHFETDAEAKKLLEQVKKFKTTR 428
            S L E +E+  STL L+E+F + RSVGEECI++EELR+LLEKK HP+ YDGFEPSGRMHIAQG++R INVN+LT  GC+F+FWVADWFALLNNKMGGDLKKI+ VG+Y+IEIW+A GM+M NV+FLWAS+EINAH++EYW+RV+D+AR  N+ARIQRCCTIMGRK+ ++MSAAQ+MYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCD VKIK KPVI+SHHMLMGLK+GQEKMSKSDPDSAIFMED+ +D+ RKIKKA+CPP  V+ NPI+DY+KHIVF  + K V+       G  + Y  +++  ADYL+  IHPGDLKP +T  +N ILEPVR+HF +  E KKLL ++KK+K TR
Sbjct:   61 SKLNEVREWKKSTLTLEERFEICRSVGEECIKDEELRALLEKKDHPICYDGFEPSGRMHIAQGILRMINVNRLTSAGCIFRFWVADWFALLNNKMGGDLKKIRKVGQYLIEIWKAAGMNMENVQFLWASDEINAHADEYWTRVIDVARRFNIARIQRCCTIMGRKEADDMSAAQLMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDEVKIKHKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTASDVSRKIKKAYCPPGQVNDNPILDYMKHIVFPLFTKGVVVKRKEEFGGDKTYMTFDELAADYLTEAIHPGDLKPTLTDYLNQILEPVRQHF-SQGEPKKLLAEIKKYKITR 422          
BLAST of NO03G04650 vs. NCBI_GenBank
Match: XP_008606574.1 (tyrosyl-tRNA synthetase [Saprolegnia diclina VS20] >EQC40100.1 tyrosyl-tRNA synthetase [Saprolegnia diclina VS20])

HSP 1 Score: 535.4 bits (1378), Expect = 1.600e-148
Identity = 255/363 (70.25%), Postives = 304/363 (83.75%), Query Frame = 0
Query:   68 SGLIEGKEYYVSTLPLDEKFTLARSVGEECIQEEELRSLLEKKPHPVVYDGFEPSGRMHIAQGVMRAINVNKLTQCGCVFKFWVADWFALLNNKMGGDLKKIQTVGKYMIEIWRAVGMDMRNVEFLWASEEINAHSNEYWSRVMDIARLNNLARIQRCCTIMGRKDTEEMSAAQVMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDSVKIKFKPVILSHHMLMGLKEGQEKMSKSDPDSAIFMEDSEADLKRKIKKAFCPPEVVDGNPIVDYVKHIVFGYYGKIVIAFHG---GESEEYTEYEKFEADYLSGKIHPGDLKPAVTVAINSILEPVRKHFETDAEAKKLLEQVKKFKTTR 428
            S L E +E+  STL LDE+F + RSVGEECI++EEL+ LLEKK HP+ YDGFEPSGRMHIAQG++R INVN+LT  GC+F+FWVADWFALLNNKMGGDLKKI+ VG+YMIEIW+A GM+M NV+FLWAS+EINAH++EYW+RV+D+AR  N+ARIQRCCTIMGRK+ ++MSAAQ+MYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCD VKIK KPVI+SHHMLMGLK+GQEKMSKSDPDSAIFMED+ +D+ RKIKKA+CPP  V+ NPI+DY+KHI+F  +   V        G  + Y  YE+  ADY +  IHPGDLKP +T  +N ILEPVR+HF +  EAKKLL ++KKFK TR
Sbjct:   39 SKLGEVREWKKSTLSLDERFEICRSVGEECIKDEELKLLLEKKDHPICYDGFEPSGRMHIAQGILRVINVNRLTSAGCIFRFWVADWFALLNNKMGGDLKKIRKVGQYMIEIWKAAGMNMDNVQFLWASDEINAHADEYWTRVIDVARRFNIARIQRCCTIMGRKEADDMSAAQLMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDEVKIKHKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTASDVSRKIKKAYCPPGQVNDNPIMDYMKHIIFPLFTTGVTVKRKEDFGGDKTYLTYEELAADYAAEAIHPGDLKPTLTDYLNQILEPVRQHF-SQGEAKKLLAEIKKFKITR 400          
BLAST of NO03G04650 vs. NCBI_GenBank
Match: XP_012204914.1 (tyrosyl-tRNA synthetase [Saprolegnia parasitica CBS 223.65] >KDO24317.1 tyrosyl-tRNA synthetase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 535.0 bits (1377), Expect = 2.100e-148
Identity = 254/363 (69.97%), Postives = 304/363 (83.75%), Query Frame = 0
Query:   68 SGLIEGKEYYVSTLPLDEKFTLARSVGEECIQEEELRSLLEKKPHPVVYDGFEPSGRMHIAQGVMRAINVNKLTQCGCVFKFWVADWFALLNNKMGGDLKKIQTVGKYMIEIWRAVGMDMRNVEFLWASEEINAHSNEYWSRVMDIARLNNLARIQRCCTIMGRKDTEEMSAAQVMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDSVKIKFKPVILSHHMLMGLKEGQEKMSKSDPDSAIFMEDSEADLKRKIKKAFCPPEVVDGNPIVDYVKHIVFGYYGKIVIAFHG---GESEEYTEYEKFEADYLSGKIHPGDLKPAVTVAINSILEPVRKHFETDAEAKKLLEQVKKFKTTR 428
            S L E +E+  STL L+E+F + RSVGEECI++EEL+ LLEKK HP+ YDGFEPSGRMHIAQG++R INVN+LT  GC+F+FWVADWFALLNNKMGGDLKKI+ VG+YMIEIW+A GM+M NV+FLWAS+EINAH++EYW+RV+D+AR  N+ARIQRCCTIMGRK+ ++MSAAQ+MYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCD VKIK KPVI+SHHMLMGLK+GQEKMSKSDPDSAIFMED+ +D+ RKIKKA+CPP  V+ NPI+DY+KHI+F  +   V        G  + Y  YE+  ADY +  IHPGDLKP +T  +N ILEPVR+HF +  EAKKLL ++KKFK TR
Sbjct:   39 SKLAEVREWKKSTLSLEERFEICRSVGEECIKDEELKLLLEKKDHPICYDGFEPSGRMHIAQGILRVINVNRLTSAGCIFRFWVADWFALLNNKMGGDLKKIRKVGQYMIEIWKAAGMNMDNVQFLWASDEINAHADEYWTRVIDVARRFNIARIQRCCTIMGRKEADDMSAAQLMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDEVKIKHKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTASDVSRKIKKAYCPPGQVNDNPIMDYMKHIIFPLFTTGVTVKRKEDFGGDKTYLTYEELAADYAAEAIHPGDLKPTLTDYLNQILEPVRQHF-SQGEAKKLLAEIKKFKITR 400          
BLAST of NO03G04650 vs. NCBI_GenBank
Match: OQS00504.1 (tyrosyl-tRNA synthetase [Achlya hypogyna])

HSP 1 Score: 534.3 bits (1375), Expect = 3.600e-148
Identity = 254/357 (71.15%), Postives = 299/357 (83.75%), Query Frame = 0
Query:   74 KEYYVSTLPLDEKFTLARSVGEECIQEEELRSLLEKKPHPVVYDGFEPSGRMHIAQGVMRAINVNKLTQCGCVFKFWVADWFALLNNKMGGDLKKIQTVGKYMIEIWRAVGMDMRNVEFLWASEEINAHSNEYWSRVMDIARLNNLARIQRCCTIMGRKDTEEMSAAQVMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDSVKIKFKPVILSHHMLMGLKEGQEKMSKSDPDSAIFMEDSEADLKRKIKKAFCPPEVVDGNPIVDYVKHIVFGYYGKIVIAFHG---GESEEYTEYEKFEADYLSGKIHPGDLKPAVTVAINSILEPVRKHFETDAEAKKLLEQVKKFKTTR 428
            +E+  S L LDE+F L RSVGEECI+EEELR LLEKK HP+ YDGFEPSGRMHIAQG++R INVN+LT  GC+F+FWVADWFALLNNKMGGDLKKI+ VG+YMIEIW+A GM+M NV+FLWAS+EINAH++EYW+RV+D+AR  N+ARIQRCCTIMGRK+ ++MSAAQ+MYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCD VKIK KPVI+SHHMLMGLK+GQEKMSKSDPDSAIFMED+ +D+ RKIKKA+CPP  V+ NPI+DY+KHI+F  +   V        G  + Y  YE+  ADYL+  IHPGDLKP +T  +N ILEPVR HF +  E KKLL ++KKFK TR
Sbjct:   51 REWKKSELSLDERFELCRSVGEECIKEEELRLLLEKKDHPICYDGFEPSGRMHIAQGILRVINVNRLTSAGCIFRFWVADWFALLNNKMGGDLKKIRKVGQYMIEIWKAAGMNMDNVQFLWASDEINAHADEYWTRVIDVARRFNIARIQRCCTIMGRKEADDMSAAQLMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDEVKIKHKPVIISHHMLMGLKQGQEKMSKSDPDSAIFMEDTASDVSRKIKKAYCPPGQVNDNPIMDYMKHIIFPLFTTGVTVKRKEDFGGDKTYMTYEELAADYLAEAIHPGDLKPTLTDYLNQILEPVRAHF-SQGEPKKLLAEIKKFKITR 406          
BLAST of NO03G04650 vs. NCBI_GenBank
Match: GAQ78185.1 (Tyrosyl-tRNA synthetase [Klebsormidium nitens])

HSP 1 Score: 515.0 bits (1325), Expect = 2.200e-142
Identity = 250/377 (66.31%), Postives = 305/377 (80.90%), Query Frame = 0
Query:   54 GSLVNISGSGKRGPSGLIEGKEYYVSTLPLDEKFTLARSVGEECIQEEELRSLLEKKP-HPVVYDGFEPSGRMHIAQGVMRAINVNKLTQCGCVFKFWVADWFALLNNKMGGDLKKIQTVGKYMIEIWRAVGMDMRNVEFLWASEEINAHSNEYWSRVMDIARLNNLARIQRCCTIMGRKDTEEMSAAQVMYPCMQCADVFFLKADICQLGLDQRKVNMLAREYCDSVKIKFKPVILSHHMLMGLKEGQEKMSKSDPDSAIFMEDSEADLKRKIKKAFCPPEVVDGNPIVDYVKHIVFGYYGK--IVIAFHGGESEEYTEYEKFEADYLSGKIHPGDLKPAVTVAINSILEPVRKHFETDAEAKKLLEQVKKFKTTR 428
            GS + + GS     +G   G       L +DE+F LARSVGEECIQE+EL +LL KKP  PV YDGFEPSGR+HIAQGVM+A+NVNKLT+ GC+FKFWVADWFA LNNKMGGDLKKIQTVG+YMIE+W+AVGMD+ NV+FLW+SEEIN+ ++EYW  VMDIAR NNLARI RC  IMGR + +++SAAQ++YPCMQCAD+FFLKADICQLG+DQRKVNMLAREYCD +K K KP+ILSHHML GL++GQEKMSKSDP+SAIFMEDSEA++  KIKKA+CPP V+ GNPI +YVK ++  + GK  +V A   G ++ YT+  + EADY +G +HPGDLK A++  +N IL+PVR HF+ D EAKKLL QVK +KTTR
Sbjct:   11 GSAIAVPGSETDKLAGSFGG-------LSIDERFALARSVGEECIQEDELWNLLLKKPTPPVCYDGFEPSGRVHIAQGVMKALNVNKLTKAGCIFKFWVADWFAQLNNKMGGDLKKIQTVGRYMIEVWKAVGMDLTNVQFLWSSEEINSKAHEYWPLVMDIARKNNLARIVRCSQIMGRNEKDDLSAAQILYPCMQCADIFFLKADICQLGMDQRKVNMLAREYCDEIKRKNKPIILSHHMLPGLQQGQEKMSKSDPNSAIFMEDSEAEVNVKIKKAYCPPGVIQGNPIFEYVKFVLIPWSGKLNVVRAEEHGGNKTYTDIAEVEADYTAGSLHPGDLKSALSRGLNEILQPVRDHFQKDPEAKKLLTQVKSYKTTR 380          
The following BLAST results are available for this feature:
BLAST of NO03G04650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29924.12.300e-20081.26Aminoacyl-tRNA synthetase, class Ic [Nannochlorops... [more]
EWM29925.12.400e-19285.79Aminoacyl-tRNA synthetase, class Ic [Nannochlorops... [more]
XP_009842365.11.600e-15372.53tyrosine-tRNA ligase [Aphanomyces astaci] >ETV6806... [more]
XP_008873065.13.700e-15372.45tyrosine-tRNA ligase [Aphanomyces invadans] >ETV98... [more]
CBJ30608.11.400e-14972.93Tyrosine--tRNA ligase [Ectocarpus siliculosus][more]
OQS04446.19.400e-14969.70tyrosyl-tRNA synthetase [Thraustotheca clavata][more]
XP_008606574.11.600e-14870.25tyrosyl-tRNA synthetase [Saprolegnia diclina VS20]... [more]
XP_012204914.12.100e-14869.97tyrosyl-tRNA synthetase [Saprolegnia parasitica CB... [more]
OQS00504.13.600e-14871.15tyrosyl-tRNA synthetase [Achlya hypogyna][more]
GAQ78185.12.200e-14266.31Tyrosyl-tRNA synthetase [Klebsormidium nitens][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL066nonsL066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR048ngnoR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005419NSK005419Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04650.1NO03G04650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573048gene_1670Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100035g30gene735Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04650.1NO03G04650.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04650 ID=NO03G04650|Name=NO03G04650|organism=Nannochloropsis oceanica|type=gene|length=1650bp
AAACACAGTCCACCATGTCGGTCGACCAGCGGTTCTCAGTACAGGCCACG
GCATGCTTTACGGTCCTAGAGGCCCCAGGCGgtacgtaaattggttgctt
tccctcgcctcccttccctcagttcacctccccccctccaatgcctccta
tcctgtgcgcccattcattgaacccttgcacaaagaagtgccgcaagcca
catgccgaagtcatgcatggccttgtacgcgtgggaactccctttctctt
tatttttcaagcctttcctgtacatctcatcatgacacgccatctatccc
ttactcctccaacctacactagTCACGCAAAAAACCTCCTCCTCCTCGTC
CTCCTCGTCGTCGTCCTCATCCAAGCCTACAAATGGTAGCAAGATCTCTT
CCTCCATAGCAATCGGGTCACTTGTAAACATAAGCGGCAGTGGCAAGCGA
GGCCCTAGCGGGCTGATTGAAGGCAAGGAGTACTACGTTTCCACGTTGCC
TTTAGACGAGAAGTTCACCTTGGCCCGTAGCGTAGGGGAGGAATGCATTC
AAGAGGAGGAGCTACGATCTCTTCTGGAAAAGAAGCCGCATCCTGTCGTA
TATGATGGCTTTGAGCCGTCGGGGCGTATGCATATTGCGCAGGGGGTGAT
GCGTGCGATCAATGTGAATAAATTGACGCAGTGTGGGTGTGTGTTCAAGT
TTTGGGTGGCGGATTGGTTTGCGTTGTTGAATAACAAAATGGGGGGAGAC
TTAAAGAAGATTCAGACGGTGGGGAAGTACATGATAGAGATCTGGAGGGC
GGTGGGGATGGACATGAGAAATGTGGAGTTTTTGTGGGCCTCGGAAGAGA
TTAACGCACATTCGAATGAGTACTGGTCTAGGGTGATGGACATTGCCCGC
TTGAATAACCTGGCGAGAATTCAACGATGTTGTACGATCATGGGGAGGAA
GGACACGGAGGAGATGAGCGCGGCGCAAGTGATGTATCCCTGCATGCAGT
GCGCGGATGTGTTTTTTTTGAAAGCCGACATCTGTCAGTTGGGCCTCGAT
CAACGGAAGGTGAACATGCTGGCACGTGAGTATTGTGACAGTGTCAAGAT
AAAGTTCAAGCCGGTGATTTTGTCGCATCACATGTTGATGGGCCTGAAGG
AGGGGCAGGAGAAGATGAGTAAGTCAGACCCGGACAGCGCGATTTTCATG
GAGGACTCCGAGGCGGATCTGAAGAGGAAGATCAAAAAGGCTTTTTGCCC
GCCAGAGGTGGTGGATGGAAACCCGATTGTGGATTACGTGAAGCATATTG
TGTTTGGGTACTACGGTAAGATTGTCATTGCGTTCCACGGCGGGGAGAGT
GAGGAGTACACGGAGTACGAAAAGTTCGAGGCGGATTACTTGAGTGGCAA
GATTCACCCAGGGGATCTCAAGCCGGCGGTAACGGTGGCGATTAACAGTA
TCTTGGAGCCGGTCCGTAAGCATTTTGAGACGGATGCGGAGGCGAAAAAG
CTGCTGGAGCAGGTGAAGAAGTTTAAGACGACGCGATAAAATTGGGGTTT
AGGAGGAGAGAGGGAGGGGGCGTGAACGACGATGGCTACAGACAGTAGTT
GACAGTCGGTTGAAAGCAAGAGATAGCAAGCGCGAAATAAAAAAGACGCC
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protein sequence of NO03G04650.1

>NO03G04650.1-protein ID=NO03G04650.1-protein|Name=NO03G04650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=428bp
MSVDQRFSVQATACFTVLEAPGVTQKTSSSSSSSSSSSSKPTNGSKISSS
IAIGSLVNISGSGKRGPSGLIEGKEYYVSTLPLDEKFTLARSVGEECIQE
EELRSLLEKKPHPVVYDGFEPSGRMHIAQGVMRAINVNKLTQCGCVFKFW
VADWFALLNNKMGGDLKKIQTVGKYMIEIWRAVGMDMRNVEFLWASEEIN
AHSNEYWSRVMDIARLNNLARIQRCCTIMGRKDTEEMSAAQVMYPCMQCA
DVFFLKADICQLGLDQRKVNMLAREYCDSVKIKFKPVILSHHMLMGLKEG
QEKMSKSDPDSAIFMEDSEADLKRKIKKAFCPPEVVDGNPIVDYVKHIVF
GYYGKIVIAFHGGESEEYTEYEKFEADYLSGKIHPGDLKPAVTVAINSIL
EPVRKHFETDAEAKKLLEQVKKFKTTR*
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Synonyms
Publications