NO03G04560, NO03G04560 (gene) Nannochloropsis oceanica

Overview
NameNO03G04560
Unique NameNO03G04560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2180
Alignment locationchr3:1311242..1313421 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1311242..1313421 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO03G04560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL066nonsL066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR048ngnoR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04560.1NO03G04560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04560.1NO03G04560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04560 ID=NO03G04560|Name=NO03G04560|organism=Nannochloropsis oceanica|type=gene|length=2180bp
GGGGCATCGGATGATGCCATGGGAGTACCCTGGCCCCCTTTTGCCCTGTT
GCATTGGGCATCACCGCTCTCTCAGCACACTTTGCCCTTCATAAGAACTG
GCACTTGACCAAAAAAGGCACCTTGCCTGCCCATTTTACATTTTTTCCAC
CACCAGACAGGATCCATGGCGCCTACTATTTGTAACCCCATCCTACCCAC
TTCAGCACGTACTCCACGGGGCGACGAACTTTTACGCGCACGTTGTCATC
ATTTGTGTGCCTTGGTCTGCGGAGTTGGAGTCGTGATCTTGAATAAGACG
ATTAAACTTCTTCAACAGATTTTCACGGCTCTGTCCCTCCCTTTTTTCCC
CTCCAAAAACACAGAAATGTCCCCGTCAACTGAGACTGCTAAAGCCAAGC
GACTGGATGTGGCCATCCGGAAGGATTCACCCAAGACACTGGAGGTGAAA
TGCGTTTTATGTCCACTGACTCATGGCTAGTCTTGGAATTTTCCCTCGAA
TATATCCTTGAAGACTTTGCGGGAAGCTGCGTTCCTTTGAGCCTTCGGTG
AAACAGGCGGTGACGAACGGTTGGTCCAGGTCGACATGGATTCATTTTAG
GGCCGACAACGGGGCTTTTAAGCGGTTCTGGCTTCTAGATCATGGGTTGG
AGTCACGGGAGGTGTCGGCTCACTGTGTTTAATGCCTCATCAATGGCCGG
AAAGAACCTGCTGCCTTCCGTAAAAGGAGGCGCAATGACAACCAGGCGGG
GAGGGGAGGAGGGAGGGAGGGAGAGAGGAGGAGGAAAGGGAGGAAGGGGA
GGAAAAGGAGGAAAAGGAGGCAGAGGACGAAGAGGAGGAGCGGGAAGATC
GAGAGGAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGAGTAGGAGTAGGAG
GAACAGGAGGAGGGACAGGAGGGAGAGGAGGAGAGAGAGAAGTAGCAACA
GGTGTAGGAAGAAGAAGAGGAGTAGCACAACAGGAGGTGGAGGAGGAGCG
AGAGGAGCGGCAGCAGCAACAGCAACAGGAGGAGGAGGGAAAGGCAGCAG
GTGGAGCAAGAGGAGCAGCAGGAGGAAGAGGAGGAGGGGGGAGGGGAGGG
CATGGAAAGGGGGGAAGCGGCGGAGGCCCTGTGATCGTGAACCCGGAAGA
GGTCCAAGCTTTCATCAACGAGGGACGACGGCTTCTAAAGCTGGAGGGTT
CCCACATCCTGAAAGTGACGAGTTTGATCTCAGTGGAGAAACTCTTTCTC
CCGTACCTATACCATATCTTGCACGAGTATCACCTTAAAGGCCTGGCGGT
ACAACGGGGGATAGAGGAGAATTCCGGGATGCAAGCGGAGAACGGAGGGA
ATGTTTGCCATCGGGGTTTTTTAAATCGCTCCAGTCTGCAGGTGTCAACC
GCCATGAAGCGGCGGTTGACACCTGGGTACACATTGTTGAAGAAGGTGGC
GAATGGTAAACCGGAGATGGCCGAGGCAGCATGGGAGGCAGAATGTCTTG
ACTGGTTGGGCCGTCTGGGAGAGATGAGTCAGAATGATTCTTGTAAGGAC
TGAGTGGGAGGAAACATTCAGAATCTGAGACATTCGAAAGCATCGGGAGT
TTAATCGCCGGATTTCAGCGGATGGTGTCTCGATGACGGTCAACTTGAAA
ATGACGACGGAGAAACTAGAGCAGGACCGACAGCAGAGGCTGGAAAACCT
GCAGCCAGACAGAGATCCGTGCTTTGGATCGGTCCCGGTCGTGTCAAACG
TTTGACGGCACTGGACTCGCAGACAATGAAAATCAAAACTTTGACGCGAG
GAGAGTACAACGAGATGGGGCGGATCAAAACACTCAACGAAGATGGTCTC
TTGGGAGACTTTCCTCCACGATGCAAACAGTGCATTGCCAAACTCTCGCG
CGTTCGCTTCTTCTCTCATCTAAGATCCCACAATTGATCGTAATGTACAA
TCAGCTCGAGGTAAGCACTTCGAATGTGACAGCACGTCTCGATCAATCGT
GGGACAGTAGGTGCGAAAGAAGTGGGCACGCAAGAGCATGGCTGTGCATA
TATATCGGGGAAGCAGAAGCTTATGGATAGTTTCTTCGCTGGTTTGACGG
GGTCAGGGCAAACGTAGCCCGTCGTTGCATATGGGCCGGCTTCCTTCCAT
CAAAAAAGAGAGGGGCGATCTCGTTACCGT
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protein sequence of NO03G04560.1

>NO03G04560.1-protein ID=NO03G04560.1-protein|Name=NO03G04560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=304bp
MGWSHGRCRLTVFNASSMAGKNLLPSVKGGAMTTRRGGEEGGRERGGGKG
GRGGKGGKGGRGRRGGAGRSRGAAAAAAAAGGVGVGGTGGGTGGRGGERE
VATGVGRRRGVAQQEVEEEREERQQQQQQEEEGKAAGGARGAAGGRGGGG
RGGHGKGGSGGGPVIVNPEEVQAFINEGRRLLKLEGSHILKVTSLISVEK
LFLPYLYHILHEYHLKGLAVQRGIEENSGMQAENGGNVCHRGFLNRSSLQ
VSTAMKRRLTPGYTLLKKVANGKPEMAEAAWEAECLDWLGRLGEMSQNDS
CKD*
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Synonyms
Publications