NO03G04250, NO03G04250 (gene) Nannochloropsis oceanica

Overview
NameNO03G04250
Unique NameNO03G04250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2586
Alignment locationchr3:1225687..1228272 -

Link to JBrowse

Properties
Property NameValue
DescriptionTransmembrane protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1225687..1228272 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002293AA/rel_permease1
Homology
[Close]
BLAST of NO03G04250 vs. NCBI_GenBank
Match: OQR90523.1 (hypothetical protein THRCLA_09308 [Thraustotheca clavata])

HSP 1 Score: 244.6 bits (623), Expect = 5.300e-61
Identity = 141/303 (46.53%), Postives = 197/303 (65.02%), Query Frame = 0 
Query:   96 LGEWSATALCGNDLLSSCLYTIGLVTQKAGKAAPLSFIFVSLVLYLIKNVYAMAVLSFPQNGGSYNVLAHVAPRPLAVLAATLSIISYIATCVVSAVSACDYLSKVIDMNSPVLASVLLLLFFAALVLTGLKESSSIALGIFLVHGITLLVLAVSCFAVATSQGFSVLWLNIDQ-PYPKITMAGSEMSSSLGIALFLGFSSAMLGVSGYETTAQCIEHLHSETFIKCLWNLWVGVTVINPLLSFLAISILPIPEINANSDTVLSRMAMVSGEWIFGEGSSMAQLFTDWMSLEAFCVLSGGMLS 398
            L EW ATA+CGND+LSSCLY  GLVT KAGK APL  + V+ +LYL + +Y   V + P NGGSYNVL +   + +A +AA+L+I+SYIAT VVS  SAC YLS  +   S V AS+ LL FFA L   G+ ES+ +AL IF++H +TL+VL V          FS+L+ N+ Q  +P++ +AG+ +S  +  ALF G S+AMLG+SG+E+++Q ++      F K L N+W GV V NPLLSFL++ ++P+  IN   +TVLS+MA+V G           Q     +S++AF VLSG +L+
Sbjct:   67 LSEWPATAICGNDILSSCLYVSGLVTAKAGKLAPLDLVLVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASIAASLAILSYIATGVVSGTSACTYLSATVPTLSVVPASIGLLFFFAVLTCMGISESAMVALVIFIIHTLTLVVLCVMSVLFMAKNNFSILYENLFQTDFPEVNVAGTWVSGDVFTALFFGTSTAMLGISGFESSSQFVQEQAPGVFPKTLKNMWWGVAVFNPLLSFLSLGVMPMSNINMFKNTVLSQMALVVG----------GQTLQTIVSIDAFIVLSGAVLT 359
[Close]
BLAST of NO03G04250 vs. NCBI_GenBank
Match: EWM28484.1 (transmembrane protein [Nannochloropsis gaditana])

HSP 1 Score: 243.8 bits (621), Expect = 9.000e-61
Identity = 138/315 (43.81%), Postives = 197/315 (62.54%), Query Frame = 0 
Query:   96 LGEWSATALCGNDLLSSCLYTIGLVTQKAGKAAPLSFIFVSLVLYLIKNVYAMAVLSFPQNGGSYNVLAHVAPRPLAVLAATLSIISYIATCVVSAVSACDYLSKVIDMNSPVLASVLLLLFFAALVLTGLKESSSIALGIFLVHGITLLVLAVSCFAVATSQGFSVLWLNIDQPYPKITMAGSEMSSSLGIALFLGFSSAMLGVSGYETTAQCIEHLHSETFIKCLWNLWVGVTVINPLLSFLAISILPIPEINANSDTVLSRMAMVSGEWI-------------FGEGSSMAQLFTDWMSLEAFCVLSGGMLS 398
            L +W ATA+CGND+++SC Y +GLVT  AGK APL+ + VS VLYLI+ +YA A+ + P NGGS+NVL +   + +A  AATL+++SYIAT VVSA SA DYL KV+ + +P+LA + LL  FA LV  G+KES+ +A  IF +H  TL +L  +C  V      S L  N   PYP + + G   S S   A+F G++SA+LGVSG+E+++Q ++      F+K L N+WVG  V NP +SFL++ +LP+  I  +   VL++MA   G+W+              G G    +    W+SL+AF VLSG +L+
Sbjct:  110 LNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHIFTLTLLC-ACSMVYVVADPSTLRENFRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTISFLSLGVLPLARIVEDESVVLAKMAKHVGDWMCGGAGAGVEASRRLGAGMGGGRWLEIWVSLDAFLVLSGSLLT 423
[Close]
BLAST of NO03G04250 vs. NCBI_GenBank
Match: XP_008865169.1 (hypothetical protein H310_03164 [Aphanomyces invadans] >ETW07094.1 hypothetical protein H310_03164 [Aphanomyces invadans])

HSP 1 Score: 243.4 bits (620), Expect = 1.200e-60
Identity = 135/307 (43.97%), Postives = 193/307 (62.87%), Query Frame = 0 
Query:   91 EKKNMLGEWSATALCGNDLLSSCLYTIGLVTQKAGKAAPLSFIFVSLVLYLIKNVYAMAVLSFPQNGGSYNVLAHVAPRPLAVLAATLSIISYIATCVVSAVSACDYLSKVIDMNSPVLASVLLLLFFAALVLTGLKESSSIALGIFLVHGITLLVLAVSCFAVATSQGFSVLWLNIDQPYPKITMAGSEMSSSLGIALFLGFSSAMLGVSGYETTAQCIEHLHSETFIKCLWNLWVGVTVINPLLSFLAISILPIPEINANSDTVLSRMAMVSGEWIFGEGSSMAQLFTDWMSLEAFCVLSGGMLS 398
            ++ + LGEW ATA+CGND+LSSCLYT G+V  +AGK AP++   V+ +LYL + +Y   V + P NGGSYN L +   + +A +AA L I+SY+AT VVS  SAC YL  VI +   V ASV LLLFFA L + G++ES+ +AL IF+VH  TL+VL             ++L  N+   YP +++AG+ +S ++  A F G  +AMLG+SG+ET+AQ +E      F K L N+W GV   NP++S L++++LP+P +  + DTVLS MA V G                WM+++AF VLSG +L+
Sbjct:   79 KQAHRLGEWPATAICGNDILSSCLYTTGIVAVRAGKLAPVAMATVAAILYLYRYIYTEVVTAIPLNGGSYNALLNTTTKRIASVAAALGILSYVATGVVSGTSACTYLQSVIPLLPVVEASVGLLLFFALLSIVGIRESAGLALVIFVVHTATLIVLCAMSIVFLVKNEATILRANLSADYPDVSVAGATLSGTVWTAFFFGMCTAMLGISGFETSAQFVEDQAPGVFPKTLRNMWWGVAAFNPMISLLSLAVLPLPVVVRHKDTVLSAMARVVG----------GPALETWMAIDAFVVLSGAVLT 375
[Close]
BLAST of NO03G04250 vs. NCBI_GenBank
Match: XP_012208270.1 (hypothetical protein SPRG_13946 [Saprolegnia parasitica CBS 223.65] >KDO21018.1 hypothetical protein SPRG_13946 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 241.9 bits (616), Expect = 3.400e-60
Identity = 139/302 (46.03%), Postives = 188/302 (62.25%), Query Frame = 0 
Query:   96 LGEWSATALCGNDLLSSCLYTIGLVTQKAGKAAPLSFIFVSLVLYLIKNVYAMAVLSFPQNGGSYNVLAHVAPRPLAVLAATLSIISYIATCVVSAVSACDYLSKVIDMNSPVLASVLLLLFFAALVLTGLKESSSIALGIFLVHGITLLVLAVSCFAVATSQGFSVLWLNIDQPYPKITMAGSEMSSSLGIALFLGFSSAMLGVSGYETTAQCIEHLHSETFIKCLWNLWVGVTVINPLLSFLAISILPIPEINANSDTVLSRMAMVSGEWIFGEGSSMAQLFTDWMSLEAFCVLSGGMLS 398
            LG+W ATA+CGND+LSSCLYT G+   KAGK AP++   V+ VLYL + +Y   V + P NGGSYNVL +   + LA +AA L I+SY+AT VVS  SAC YL+  +   + V +S+ LLL FA L + G+ ES+ +AL IF+VH ITL+VL V+          ++L  N   PYP I MAG  +  S+  ALF G S+AMLG+SG+ET+AQ +E      F K L N+W GV + NPL+SFLA+ +LP+  I A  +TVL+ M    G                W++L+AF VLSG +L+
Sbjct:   67 LGQWPATAICGNDILSSCLYTAGVAAAKAGKLAPVAMGMVAAVLYLYRFIYGEVVNAIPLNGGSYNVLLNTTSKRLASIAAALGILSYVATGVVSGTSACTYLASQVPGLAIVHSSIALLLLFAVLAIVGISESAVVALLIFIVHTITLVVLCVASIVFVIRDQGAILSSNYQAPYPDINMAGQWIDGSVWTALFFGTSTAMLGISGFETSAQFVEEQAPGVFPKTLRNMWWGVVIFNPLISFLALGVLPLEAIQAQKNTVLAAMGKAVG----------GHRLEAWVALDAFVVLSGAVLT 358
[Close]
BLAST of NO03G04250 vs. NCBI_GenBank
Match: XP_008620351.1 (hypothetical protein SDRG_15943 [Saprolegnia diclina VS20] >EQC26206.1 hypothetical protein SDRG_15943 [Saprolegnia diclina VS20])

HSP 1 Score: 240.4 bits (612), Expect = 1.000e-59
Identity = 138/302 (45.70%), Postives = 186/302 (61.59%), Query Frame = 0 
Query:   96 LGEWSATALCGNDLLSSCLYTIGLVTQKAGKAAPLSFIFVSLVLYLIKNVYAMAVLSFPQNGGSYNVLAHVAPRPLAVLAATLSIISYIATCVVSAVSACDYLSKVIDMNSPVLASVLLLLFFAALVLTGLKESSSIALGIFLVHGITLLVLAVSCFAVATSQGFSVLWLNIDQPYPKITMAGSEMSSSLGIALFLGFSSAMLGVSGYETTAQCIEHLHSETFIKCLWNLWVGVTVINPLLSFLAISILPIPEINANSDTVLSRMAMVSGEWIFGEGSSMAQLFTDWMSLEAFCVLSGGMLS 398
            LG+W ATA+CGND+LSSCLYT G+   KAGK AP++   V+ VLYL + +Y   V + P NGGSYNVL +   + LA +AA L I+SY+AT VVS  SAC YL+  +     V +S+ LL  FA L + G+ ES+ +AL IF VH ITL+VL V+          ++L  N   PYP I MAG  +  S+  ALF G S+AMLG+SG+ET+AQ +E      F K L N+W GV + NPL+SFLA+ +LP+  I A+ +TVL+ M    G                W++L+AF VLSG +L+
Sbjct:   67 LGQWPATAICGNDILSSCLYTAGVAAAKAGKLAPVAMAMVAAVLYLYRFIYGEVVNAIPLNGGSYNVLLNTTSKRLASIAAALGILSYVATGVVSGTSACTYLASQVHGLEIVHSSIALLFLFAILAIIGISESAVVALLIFAVHTITLIVLCVASIVFVIRDQGAILTSNYQAPYPDINMAGQWIDGSVWTALFFGTSTAMLGISGFETSAQFVEEQAPGVFPKTLRNMWWGVVIFNPLISFLALGVLPLSAIQAHKNTVLAAMGKAVG----------GHRLEAWVALDAFVVLSGAVLT 358
[Close]
BLAST of NO03G04250 vs. NCBI_GenBank
Match: XP_008620352.1 (hypothetical protein, variant [Saprolegnia diclina VS20] >EQC26207.1 hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 240.4 bits (612), Expect = 1.000e-59
Identity = 138/302 (45.70%), Postives = 186/302 (61.59%), Query Frame = 0 
Query:   96 LGEWSATALCGNDLLSSCLYTIGLVTQKAGKAAPLSFIFVSLVLYLIKNVYAMAVLSFPQNGGSYNVLAHVAPRPLAVLAATLSIISYIATCVVSAVSACDYLSKVIDMNSPVLASVLLLLFFAALVLTGLKESSSIALGIFLVHGITLLVLAVSCFAVATSQGFSVLWLNIDQPYPKITMAGSEMSSSLGIALFLGFSSAMLGVSGYETTAQCIEHLHSETFIKCLWNLWVGVTVINPLLSFLAISILPIPEINANSDTVLSRMAMVSGEWIFGEGSSMAQLFTDWMSLEAFCVLSGGMLS 398
            LG+W ATA+CGND+LSSCLYT G+   KAGK AP++   V+ VLYL + +Y   V + P NGGSYNVL +   + LA +AA L I+SY+AT VVS  SAC YL+  +     V +S+ LL  FA L + G+ ES+ +AL IF VH ITL+VL V+          ++L  N   PYP I MAG  +  S+  ALF G S+AMLG+SG+ET+AQ +E      F K L N+W GV + NPL+SFLA+ +LP+  I A+ +TVL+ M    G                W++L+AF VLSG +L+
Sbjct:   67 LGQWPATAICGNDILSSCLYTAGVAAAKAGKLAPVAMAMVAAVLYLYRFIYGEVVNAIPLNGGSYNVLLNTTSKRLASIAAALGILSYVATGVVSGTSACTYLASQVHGLEIVHSSIALLFLFAILAIIGISESAVVALLIFAVHTITLIVLCVASIVFVIRDQGAILTSNYQAPYPDINMAGQWIDGSVWTALFFGTSTAMLGISGFETSAQFVEEQAPGVFPKTLRNMWWGVVIFNPLISFLALGVLPLSAIQAHKNTVLAAMGKAVG----------GHRLEAWVALDAFVVLSGAVLT 358
[Close]
BLAST of NO03G04250 vs. NCBI_GenBank
Match: OQR82545.1 (hypothetical protein ACHHYP_15869 [Achlya hypogyna])

HSP 1 Score: 239.6 bits (610), Expect = 1.700e-59
Identity = 137/302 (45.36%), Postives = 186/302 (61.59%), Query Frame = 0 
Query:   96 LGEWSATALCGNDLLSSCLYTIGLVTQKAGKAAPLSFIFVSLVLYLIKNVYAMAVLSFPQNGGSYNVLAHVAPRPLAVLAATLSIISYIATCVVSAVSACDYLSKVIDMNSPVLASVLLLLFFAALVLTGLKESSSIALGIFLVHGITLLVLAVSCFAVATSQGFSVLWLNIDQPYPKITMAGSEMSSSLGIALFLGFSSAMLGVSGYETTAQCIEHLHSETFIKCLWNLWVGVTVINPLLSFLAISILPIPEINANSDTVLSRMAMVSGEWIFGEGSSMAQLFTDWMSLEAFCVLSGGMLS 398
            LG+W ATA+CGND+LSSCLYT G+   KAGK AP++   V+ VLYL + +Y   V + P NGGSYNVL +   + LA +AA L I+SY+AT VVS  SAC YL+  +     V AS+ LL+FFA L + G+ ES+ +AL IF  H ITL+VL  +        G   L  N   PYP I MAG  +  ++  ALF G S+AMLG+SG+ET+AQ +E      F K L N+W GV + NPL+SFLA+ +LP+ +I  + +TVL+ M    G           +    W++L+AF VLSG +L+
Sbjct:   67 LGQWPATAICGNDILSSCLYTAGVAAAKAGKLAPVAMAMVAAVLYLYRFIYGEVVNAIPLNGGSYNVLLNTTSKRLASIAAALGILSYVATGVVSGTSACTYLASQVPGLLVVHASIGLLVFFAVLAIIGISESAFVALAIFTAHTITLVVLCGAAIVYVIHDGGKTLAANFHAPYPDINMAGQWIDGNVWTALFFGTSTAMLGISGFETSAQFVEEQAPGVFPKTLRNMWWGVVLFNPLISFLALGVLPLQDIQDHKNTVLAAMGKAVG----------GRRLETWVALDAFVVLSGAVLT 358
[Close]
BLAST of NO03G04250 vs. NCBI_GenBank
Match: OQR90522.1 (hypothetical protein THRCLA_09309 [Thraustotheca clavata])

HSP 1 Score: 237.3 bits (604), Expect = 8.400e-59
Identity = 138/303 (45.54%), Postives = 190/303 (62.71%), Query Frame = 0 
Query:   96 LGEWSATALCGNDLLSSCLYTIGLVTQKAGKAAPLSFIFVSLVLYLIKNVYAMAVLSFPQNGGSYNVLAHVAPRPLAVLAATLSIISYIATCVVSAVSACDYLSKVIDMNSPVLASVLLLLFFAALVLTGLKESSSIALGIFLVHGITLLVL-AVSCFAVATSQGFSVLWLNIDQPYPKITMAGSEMSSSLGIALFLGFSSAMLGVSGYETTAQCIEHLHSETFIKCLWNLWVGVTVINPLLSFLAISILPIPEINANSDTVLSRMAMVSGEWIFGEGSSMAQLFTDWMSLEAFCVLSGGMLS 398
            LG+W ATA+CGND+LSSCLYT G+   KAGK AP++   V+ VLYL + +Y   V + P NGGSYNVL +   + LA +AA L I+SY+AT VVS  SAC YL+  I   + V +S+ LL FFA L + G+ ES+  AL IF+ H ITL++L  VS + V   +G  +L  N   PYP I MAG  +  +   ALF G S+AMLG+SG+ET+AQ +E      F K L N+W GV + NPL++FLA+ ++P+  I AN +TVL+ M    G           +    W++++AF VLSG +L+
Sbjct:   59 LGQWPATAICGNDILSSCLYTAGVAAAKAGKLAPVAMAMVAAVLYLYRFIYGEVVNAIPLNGGSYNVLLNTTSKRLASIAAALGILSYVATGVVSGTSACTYLASQIPSLAIVHSSITLLFFFAVLAIIGISESAMFALVIFVFHTITLVMLCGVSLYFVIQDKG-KILTANYHAPYPDINMAGQWIDGTFWTALFFGTSTAMLGISGFETSAQFVEEQAPGVFPKTLRNMWWGVILFNPLIAFLALGVMPLESIQANKNTVLAAMGKTVG----------GRHLETWVAVDAFVVLSGAVLT 350
[Close]
BLAST of NO03G04250 vs. NCBI_GenBank
Match: OQR82549.1 (hypothetical protein ACHHYP_15868 [Achlya hypogyna])

HSP 1 Score: 236.9 bits (603), Expect = 1.100e-58
Identity = 138/303 (45.54%), Postives = 197/303 (65.02%), Query Frame = 0 
Query:   96 LGEWSATALCGNDLLSSCLYTIGLVTQKAGKAAPLSFIFVSLVLYLIKNVYAMAVLSFPQNGGSYNVLAHVAPRPLAVLAATLSIISYIATCVVSAVSACDYLSKVIDMNSPVLASVLLLLFFAALVLTGLKESSSIALGIFLVHGITLLVLAVSCFAVATSQGFSVLWLNI-DQPYPKITMAGSEMSSSLGIALFLGFSSAMLGVSGYETTAQCIEHLHSETFIKCLWNLWVGVTVINPLLSFLAISILPIPEINANSDTVLSRMAMVSGEWIFGEGSSMAQLFTDWMSLEAFCVLSGGMLS 398
            L EW ATA+CGND+LSSCLY  GLVT KAGK AP+S   V+ +LYL + +Y   V + P NGGSYNVL +   + +A +AA+L+I+SYIAT VVS  SAC YLS        V +SV LL FFA L   G+ ES+  ALGIF++H +TL+ L V+     +   FS+L+ N+    +P + +AGS +S  +  ALF G S+AMLG+SG+E+++Q ++   +  F K L N+W GV V NPL+S L++ ++P+  IN   +TVL++MA+V G      G ++  +    +SL+AF VLSG +L+
Sbjct:   78 LSEWPATAICGNDILSSCLYVSGLVTAKAGKLAPVSLALVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASIAASLAILSYIATGVVSGTSACTYLSSTFPALPVVPSSVGLLFFFAVLTSMGISESAMFALGIFILHTLTLIALCVASIIFMSQNNFSILYDNLFHTDFPDVNVAGSWVSGDIFTALFFGTSTAMLGISGFESSSQFVQEQAAGVFPKTLKNMWWGVAVFNPLISLLSLGVMPMANINMFKNTVLAQMALVVG------GPTLQTI----VSLDAFIVLSGAVLT 370
[Close]
BLAST of NO03G04250 vs. NCBI_GenBank
Match: XP_009840216.1 (hypothetical protein H257_14158 [Aphanomyces astaci] >ETV70256.1 hypothetical protein H257_14158 [Aphanomyces astaci])

HSP 1 Score: 236.5 bits (602), Expect = 1.400e-58
Identity = 142/330 (43.03%), Postives = 199/330 (60.30%), Query Frame = 0 
Query:   81 GESTSECGGP-EKKNM------------LGEWSATALCGNDLLSSCLYTIGLVTQKAGKAAPLSFIFVSLVLYLIKNVYAMAVLSFPQNGGSYNVLAHVAPRPLAVLAATLSIISYIATCVVSAVSACDYLSKVIDMNSPVLASVLLLLFFAALVLTGLKESSSIALGIFLVHGITLLVLAVSCFAVATSQGFSVLWLNIDQPYPKITMAGSEMSSSLGIALFLGFSSAMLGVSGYETTAQCIEHLHSETFIKCLWNLWVGVTVINPLLSFLAISILPIPEINANSDTVLSRMAMVSGEWIFGEGSSMAQLFTDWMSLEAFCVLSGGMLS 398
            G +TSE   P E K++            LGEW ATA+CGND+LSSCLYT G+V  +AGK AP++   V+ +LYL + +Y   V + P NGGSYN L +   + +A +AA L I+SY+AT VVS  SAC YL  ++     V ASV LL FFA L + G++ES+ +AL IF+VH  TL+VL             ++L  N    YP +++AG+ +  SL  ALF G  +AMLG+SG+ET+AQ +E      F K L N+W GV + NP +SFL++++LP+P +  + DTVLS MA   G    G G         W++++AF VLSG +L+
Sbjct:   56 GSATSESADPAELKDLDATLVAATHAHRLGEWPATAICGNDILSSCLYTAGIVAVRAGKLAPVAMAVVAAILYLYRYIYGEVVNAIPLNGGSYNALLNTTTKRIASVAAALGILSYVATGVVSGTSACTYLQSLVPSLPIVHASVGLLFFFALLSIIGIRESAGVALVIFVVHTTTLIVLCGMSVVFLIQDKAAILRANFHADYPDVSVAGATVPGSLSTALFFGTCTAMLGISGFETSAQFVEDQAPGVFPKTLRNMWWGVAIFNPSISFLSLAVLPLPILTTHKDTVLSAMAKAVG----GRG------LETWVAVDAFVVLSGAVLT 375
The following BLAST results are available for this feature:
BLAST of NO03G04250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OQR90523.15.300e-6146.53hypothetical protein THRCLA_09308 [Thraustotheca c... [more]
EWM28484.19.000e-6143.81transmembrane protein [Nannochloropsis gaditana][more]
XP_008865169.11.200e-6043.97hypothetical protein H310_03164 [Aphanomyces invad... [more]
XP_012208270.13.400e-6046.03hypothetical protein SPRG_13946 [Saprolegnia paras... [more]
XP_008620351.11.000e-5945.70hypothetical protein SDRG_15943 [Saprolegnia dicli... [more]
XP_008620352.11.000e-5945.70hypothetical protein, variant [Saprolegnia diclina... [more]
OQR82545.11.700e-5945.36hypothetical protein ACHHYP_15869 [Achlya hypogyna... [more]
OQR90522.18.400e-5945.54hypothetical protein THRCLA_09309 [Thraustotheca c... [more]
OQR82549.11.100e-5845.54hypothetical protein ACHHYP_15868 [Achlya hypogyna... [more]
XP_009840216.11.400e-5843.03hypothetical protein H257_14158 [Aphanomyces astac... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL066nonsL066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR048ngnoR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|549491gene_1624Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04250.3NO03G04250.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G04250.2NO03G04250.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G04250.1NO03G04250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04250.3NO03G04250.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G04250.2NO03G04250.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G04250.1NO03G04250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04250 ID=NO03G04250|Name=NO03G04250|organism=Nannochloropsis oceanica|type=gene|length=2586bp
ATGCACTTTTTGGTTCATGGACTGCTCGCGTGAGCAGACGAGCAAATCAA
AATACTGATTGTCATCCTCCTTCGTCCTTAAACCCAAACAGCAAATCCAT
CAAATGTCTTGGGGGTTGATGGCTCTCATGTGACCAGTCCGATCTCAGCG
CGACAACGAAGTATGTCGAGGAAGGCACCAGGCTTTGTTCATAGCAGCGA
CAACGGAAGCAGTAGCTACAGCAGTGGGAGTTGTAGCAGCAACAGCAGCA
GCGCTGGTAGCAATACGGGACGACCAAGCATCGGCGAGATACGTGACTGG
TCTGCCTTGGATCAGAAGCTGGTGGAAGAAGGTGTCCCAGGAATTATGAT
CGAAAAGCCAGGAAGGATGTCAGAAAGAGGAAAGGAGGGAGGGCGGAGAA
AAGGTGAGAGCACCAGCGAGTGTGGCGGTCCGGAAAAGAAAAACATGTTG
GGAGAGTGGTCGGCAACAGCATTGTGCGGAAATGACCTGCTGTCCTCCTG
CCTCTATACAATCGGACTGGTGACGCAAAAAGCGGGAAAGGCAGCGCCTC
TGTCTTTCATTTTTGTCTCTCTTGTATTGTATCTTATTAAAAACGTGTAC
GCGATGGCCGTGCTTTCCTTCCCTCAAAACGGTGGCAGCTACAATGTCTT
GGCACATGTTGCTCCCCGACCCTTGGCAGTGTTGGCGGCCACTCTTTCCA
TTATCAGTTATATTGCTACGTGTGTGGTGTCTGCTGTGAGTGCATGTGAT
TACCTGAGTAAGGTGATTGACATGAATTCTCCTGTCTTAGCTTCCGTTCT
TCTTCTCCTCTTCTTCGCTGCCTTGGTCTTGACGGGACTTAAAGAGTCTT
CGAGCATTGCCTTGGGTATTTTCCTCGTGCACGGTATCACCCTCTTGGTA
CTGGCTGTCAGTTGTTTTGCCGTTGCTACCTCACAAGGCTTTTCGGTCCT
GTGGCTTAATATTGACCAGCCTTACCCGAAGATCACGATGGCGGGAAGTG
AGATGTCTTCTTCGTTAGGGATAGCACTATTTTTGGGATTCTCATCAGCG
ATGTTGGGTGTGAGTGGTTATGAAACGACGgtaagttagaggttcggagg
gcggatggctgaatattgtggctgtttggggtttgaaaacctttacgttt
aaggatcgcttaaatgtgcagcatgcttttacgtctgtgtctatcaatgg
tcaaacttccatattttggattgtgtcatatttgtgtcctatctctcgaa
tttcctttttttcacacatctctctgcctcccctctcaccctctcaccct
tcctcgctttctttcttcctgccgcctcttagGCACAATGCATCGAACAC
CTCCACTCCGAGACATTCATCAAATGTCTGTGGAATCTCTGGGTTGGCGT
GACAGTCATCAATCCCCTTCTCTCCTTCCTTGCCATCTCCATCCTTCCAA
TCCCTGAGATCAATGCTAACAGTGATACTGTTTTGAGCCGCATGGCCATG
GTGTCAGGGGAGTGGATATTCGGAGAGGGAAGCTCGATGGCCCAGTTGTT
TACAGATTGGATGTCGCTTGAGGCTTTTTGTGTCCTTAGTGGAGGTATGC
TGAGCTACTCAACGTCTTGAGCATGCCATATTTCTCTCTCAAACTCTCTC
CCCCTCTTCAGTCTTCTCACCATCCATTCTTTCACTCCCTCTATCGACCT
TGCTTCCCTTATCAGCGGTCCTCACGGCCTTCGTCGGACTTGATGGCCTC
GTCTTTCAAATGTCCCTTGACAAATGTCTTCCCGGCGTTTTCCTCCGAAA
AAATGGATGGCGTGGCACAAATCACTATATCATCTTCACCTTTCTCCTTC
TGTGCATCGCACTCATCGTGGCCATGGACGGCAAAGTCACTGAGCTCGCT
GGAATGTATTCCATGGCTTTTCTAGGTGTCCTCGCAACCTTTATAATGGG
GAGTATGCTCTTGAAAAACTCCCCCAAACACATCCCTTTGCTTATCGCAA
AAGGTCTGACGGTCAAGTGGTGGACACTTTGTCTATCTCTAGCCCTGATT
TGCATCTCTCTTCTGGGGAACCTACTTGGGAGCTCAAGTGTTATCATCTC
TTTCCTCTCGTATTTTCTCCCGATTTATGGGATATGCCTCATCTGTCTTT
ATGCGGATAAAGCGCGATTAGTCTGTTGTCCGGGTAGCATGACAGCCACG
AGACTCTGCCAGATATTGGTGAAAAGTGATCCGAAGGCGATCAGTCCTAG
GGAGCGCGTAAGGATAACGCTGAAGGACATTGCGCTGGGTACATTGGACA
GAGATGATACGTCTTCCCCCTCATCCTCATCCTCATCTTCGACCTCACTG
TCGTCTGCGTCTTCCTCAACCTCGCCGAGATATAAATCTGACGGGATTTC
GATAGCTTAGTCGCCGTCGCCAAAGGTGTGGAAACAAAAATAAGGAGGAA
AGATGACGGCGAAGAAAAAAAAGTAAACAGACGTAAAAGAAAAAACAGTC
AGCGTACGTAGAGATGTTGTAATAAGGTCCTCGCAATCTCCTCATGCTGA
AGATATTCCTTCAGAGACATGGCCACCAAGAGCAAT
back to top

protein sequence of NO03G04250.3

>NO03G04250.3-protein ID=NO03G04250.3-protein|Name=NO03G04250.3|organism=Nannochloropsis oceanica|type=polypeptide|length=402bp
MSRKAPGFVHSSDNGSSSYSSGSCSSNSSSAGSNTGRPSIGEIRDWSALD
QKLVEEGVPGIMIEKPGRMSERGKEGGRRKGESTSECGGPEKKNMLGEWS
ATALCGNDLLSSCLYTIGLVTQKAGKAAPLSFIFVSLVLYLIKNVYAMAV
LSFPQNGGSYNVLAHVAPRPLAVLAATLSIISYIATCVVSAVSACDYLSK
VIDMNSPVLASVLLLLFFAALVLTGLKESSSIALGIFLVHGITLLVLAVS
CFAVATSQGFSVLWLNIDQPYPKITMAGSEMSSSLGIALFLGFSSAMLGV
SGYETTAQCIEHLHSETFIKCLWNLWVGVTVINPLLSFLAISILPIPEIN
ANSDTVLSRMAMVSGEWIFGEGSSMAQLFTDWMSLEAFCVLSGGMLSYST
S*
back to top

protein sequence of NO03G04250.2

>NO03G04250.2-protein ID=NO03G04250.2-protein|Name=NO03G04250.2|organism=Nannochloropsis oceanica|type=polypeptide|length=309bp
MSRKAPGFVHSSDNGSSSYSSGSCSSNSSSAGSNTGRPSIGEIRDWSALD
QKLVEEGVPGIMIEKPGRMSERGKEGGRRKGESTSECGGPEKKNMLGEWS
ATALCGNDLLSSCLYTIGLVTQKAGKAAPLSFIFVSLVLYLIKNVYAMAV
LSFPQNGGSYNVLAHVAPRPLAVLAATLSIISYIATCVVSAVSACDYLSK
VIDMNSPVLASVLLLLFFAALVLTGLKESSSIALGIFLVHGITLLVLAVS
CFAVATSQGFSVLWLNIDQPYPKITMAGSEMSSSLGIALFLGFSSAMLGV
SGYETTVS*
back to top

protein sequence of NO03G04250.1

>NO03G04250.1-protein ID=NO03G04250.1-protein|Name=NO03G04250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=625bp
MSRKAPGFVHSSDNGSSSYSSGSCSSNSSSAGSNTGRPSIGEIRDWSALD
QKLVEEGVPGIMIEKPGRMSERGKEGGRRKGESTSECGGPEKKNMLGEWS
ATALCGNDLLSSCLYTIGLVTQKAGKAAPLSFIFVSLVLYLIKNVYAMAV
LSFPQNGGSYNVLAHVAPRPLAVLAATLSIISYIATCVVSAVSACDYLSK
VIDMNSPVLASVLLLLFFAALVLTGLKESSSIALGIFLVHGITLLVLAVS
CFAVATSQGFSVLWLNIDQPYPKITMAGSEMSSSLGIALFLGFSSAMLGV
SGYETTAQCIEHLHSETFIKCLWNLWVGVTVINPLLSFLAISILPIPEIN
ANSDTVLSRMAMVSGEWIFGEGSSMAQLFTDWMSLEAFCVLSGAVLTAFV
GLDGLVFQMSLDKCLPGVFLRKNGWRGTNHYIIFTFLLLCIALIVAMDGK
VTELAGMYSMAFLGVLATFIMGSMLLKNSPKHIPLLIAKGLTVKWWTLCL
SLALICISLLGNLLGSSSVIISFLSYFLPIYGICLICLYADKARLVCCPG
SMTATRLCQILVKSDPKAISPRERVRITLKDIALGTLDRDDTSSPSSSSS
SSTSLSSASSSTSPRYKSDGISIA*
back to top
Synonyms
Publications