NO03G04070, NO03G04070 (gene) Nannochloropsis oceanica

Overview
NameNO03G04070
Unique NameNO03G04070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3072
Alignment locationchr3:1182758..1185829 -

Link to JBrowse

Properties
Property NameValue
DescriptionAdenosine deaminase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1182758..1185829 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0019239deaminase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR032466Metal_Hydrolase
IPR001365A/AMP_deaminase_dom
Homology
BLAST of NO03G04070 vs. NCBI_GenBank
Match: XP_005853436.1 (adenosine deaminase [Nannochloropsis gaditana CCMP526] >EKU22927.1 adenosine deaminase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 430.6 bits (1106), Expect = 5.600e-117
Identity = 210/286 (73.43%), Postives = 230/286 (80.42%), Query Frame = 0
Query:   71 LLRRINSNRKDGKAAVPTCRRCRAFKQLGPKLAEFLTEIPKTDLHVHLDGSPRLSTLIELAQTHGVELPAYTEEGLRTLVFHDAYDSLVDYLRGFPPIVRVMQQPGALERIAYEFAWDCINEGVRYIEPRFAPQLLATVEVDVIGVLKAAVQGLERAENEFNARTSVQDGSEPPFRFGIICCAMRVFMTDVSEYYRAFCALHKDEPPTLVYQLAASALVHAAIHAKKHLHLPIVGIDIAGQEAGFPAEAFQTAFEVAHKNFLGATVHAGEAFGPEVGRTLLQSMPC 357
            L RR+N            CRRCR FK +GP L  FLTEIPKTDLHVHLDGSPRLSTLIELAQ H V+LPAYTEEGLR LVF + YDSLVDYLRGFP IVRV+QQPGALERIAYEFAWDC+NEGV YIEPRFAPQLLAT  +DVIGVL  A +GLERA+ E+NA+ SV+DG +P F FGIICCAMR FMTDVSEYY AFC+LH+DEP  LVYQLAASAL HAAI AKK   LP+VG+DIAGQEAG+PA  FQ AFEVAHKNFLG TVHAGEAFGPE     +  + C
Sbjct:   36 LPRRVNRVNDASSDLASACRRCRVFKGMGPNLVNFLTEIPKTDLHVHLDGSPRLSTLIELAQEHHVDLPAYTEEGLRELVFRETYDSLVDYLRGFPLIVRVLQQPGALERIAYEFAWDCLNEGVLYIEPRFAPQLLATATLDVIGVLTEATRGLERAKKEYNAQQSVRDGQKPSFDFGIICCAMRTFMTDVSEYYHAFCSLHQDEPQALVYQLAASALFHAAIKAKKDHGLPVVGVDIAGQEAGYPAAEFQAAFEVAHKNFLGVTVHAGEAFGPEAVFQAITDLHC 321          
BLAST of NO03G04070 vs. NCBI_GenBank
Match: EWM29864.1 (adenosine deaminase [Nannochloropsis gaditana])

HSP 1 Score: 430.6 bits (1106), Expect = 5.600e-117
Identity = 210/286 (73.43%), Postives = 230/286 (80.42%), Query Frame = 0
Query:   71 LLRRINSNRKDGKAAVPTCRRCRAFKQLGPKLAEFLTEIPKTDLHVHLDGSPRLSTLIELAQTHGVELPAYTEEGLRTLVFHDAYDSLVDYLRGFPPIVRVMQQPGALERIAYEFAWDCINEGVRYIEPRFAPQLLATVEVDVIGVLKAAVQGLERAENEFNARTSVQDGSEPPFRFGIICCAMRVFMTDVSEYYRAFCALHKDEPPTLVYQLAASALVHAAIHAKKHLHLPIVGIDIAGQEAGFPAEAFQTAFEVAHKNFLGATVHAGEAFGPEVGRTLLQSMPC 357
            L RR+N            CRRCR FK +GP L  FLTEIPKTDLHVHLDGSPRLSTLIELAQ H V+LPAYTEEGLR LVF + YDSLVDYLRGFP IVRV+QQPGALERIAYEFAWDC+NEGV YIEPRFAPQLLAT  +DVIGVL  A +GLERA+ E+NA+ SV+DG +P F FGIICCAMR FMTDVSEYY AFC+LH+DEP  LVYQLAASAL HAAI AKK   LP+VG+DIAGQEAG+PA  FQ AFEVAHKNFLG TVHAGEAFGPE     +  + C
Sbjct:   36 LPRRVNRVNDASSDLASACRRCRVFKGMGPNLVNFLTEIPKTDLHVHLDGSPRLSTLIELAQEHHVDLPAYTEEGLRELVFRETYDSLVDYLRGFPLIVRVLQQPGALERIAYEFAWDCLNEGVLYIEPRFAPQLLATATLDVIGVLTEATRGLERAKKEYNAQQSVRDGQKPSFDFGIICCAMRTFMTDVSEYYHAFCSLHQDEPQALVYQLAASALFHAAIKAKKDHGLPVVGVDIAGQEAGYPAAEFQAAFEVAHKNFLGVTVHAGEAFGPEAVFQAITDLHC 321          
BLAST of NO03G04070 vs. NCBI_GenBank
Match: OIP35776.1 (adenosine deaminase [Deltaproteobacteria bacterium CG2_30_63_29] >PJB39926.1 adenosine deaminase family protein [Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_63_12])

HSP 1 Score: 277.3 bits (708), Expect = 7.900e-71
Identity = 133/241 (55.19%), Postives = 175/241 (72.61%), Query Frame = 0
Query:  105 FLTEIPKTDLHVHLDGSPRLSTLIELAQTHGVELPAYTEEGLRTLVFHDAYDSLVDYLRGFPPIVRVMQQPGALERIAYEFAWDCINEGVRYIEPRFAPQLLATVEVDVIGVLKAAVQGLERAENEFNARTSVQDGSEPPFRFGIICCAMRVFMTDVSEYYRAFCALHKDEPPTLVYQLAASALVHAAIHAKKHLHLPIVGIDIAGQEAGFPAEAFQTAFEVAHKNFLGATVHAGEAFGPE 346
            FL ++PKTDLHVHLDGS R+ TLIEL + + VELP+YTE GLR LVF + Y +L +YLRGF    +VMQ   ALER+AYE A D  +EGVRY+E RFAPQL     ++ + VLKA  +GL++A +E+NAR +++ G+EPPF +GII CAMR+F    SEYYR+  + H+  PP  +Y LA+  L  AA+ A+    LP+VG D+AG+EAG+PA+    AF++AHKNFL  TVHAGEA+GPE
Sbjct:    8 FLKDLPKTDLHVHLDGSLRIPTLIELCREYHVELPSYTESGLRELVFKERYQNLGEYLRGFGYTTKVMQSELALERVAYELAQDNQDEGVRYLEVRFAPQLHMHEHMNAVMVLKAVNRGLQKARDEYNAREAIKSGAEPPFEYGIIVCAMRMFQPGFSEYYRSLMSAHRYSPPKEIYNLASIELARAAVIARDRYDLPVVGFDLAGEEAGYPADDHMHAFQIAHKNFLKKTVHAGEAYGPE 248          
BLAST of NO03G04070 vs. NCBI_GenBank
Match: OGQ84176.1 (adenosine deaminase [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15] >OGR12426.1 adenosine deaminase [Deltaproteobacteria bacterium RIFOXYB12_FULL_58_9])

HSP 1 Score: 262.7 bits (670), Expect = 2.000e-66
Identity = 132/241 (54.77%), Postives = 163/241 (67.63%), Query Frame = 0
Query:  105 FLTEIPKTDLHVHLDGSPRLSTLIELAQTHGVELPAYTEEGLRTLVFHDAYDSLVDYLRGFPPIVRVMQQPGALERIAYEFAWDCINEGVRYIEPRFAPQLLATVEVDVIGVLKAAVQGLERAENEFNARTSVQDGSEPPFRFGIICCAMRVFMTDVSEYYRAFCALHKDEPPTLVYQLAASALVHAAIHAKKHLHLPIVGIDIAGQEAGFPAEAFQTAFEVAHKNFLGATVHAGEAFGPE 346
            F+ ++PKTDLHVHLDGS R+ TLIELA+   + LP+ TE GLR LVF D Y +L +YL GF   V VMQ   ALE++AYEFA D  +EGVRY+E RFAPQL     ++ I VLKA  +G+ RA  E NAR  V  GSEPPF +GIICCAMR+F    SEYY      H+  PP  VY +A+  L  AA+ A+    LP+VG D+AG+E+G+PA     AFE AH+ FL  TVHAGEA+GPE
Sbjct:   10 FIRDLPKTDLHVHLDGSIRIPTLIELAKQAHIALPSQTEGGLRELVFKDRYQNLSEYLHGFGMTVSVMQNEAALEQVAYEFAQDNYDEGVRYLEVRFAPQLHMHKHLNAIMVLKAVDRGMNRARREANARPEVASGSEPPFEYGIICCAMRMFTAGFSEYYGDLIHAHRYTPPKEVYGMASMELARAAVKARDEHGLPVVGFDLAGEESGYPAGDHYRAFEYAHRQFLKKTVHAGEAYGPE 250          
BLAST of NO03G04070 vs. NCBI_GenBank
Match: PID38583.1 (adenosine deaminase [Proteobacteria bacterium] >PIE18716.1 adenosine deaminase [Proteobacteria bacterium])

HSP 1 Score: 259.6 bits (662), Expect = 1.700e-65
Identity = 128/240 (53.33%), Postives = 166/240 (69.17%), Query Frame = 0
Query:  106 LTEIPKTDLHVHLDGSPRLSTLIELAQTHGVELPAYTEEGLRTLVFHDAYDSLVDYLRGFPPIVRVMQQPGALERIAYEFAWDCINEGVRYIEPRFAPQLLATVEVDVIGVLKAAVQGLERAENEFNARTSVQDGSEPPFRFGIICCAMRVFMTDVSEYYRAFCALHKDEPPTLVYQLAASALVHAAIHAKKHLHLPIVGIDIAGQEAGFPAEAFQTAFEVAHKNFLGATVHAGEAFGPE 346
            + ++PKTDLHVHLDGS R  TLIELA+ +GV+LP+YT  GLR  VF ++Y+SLVDYL+GF     V+Q   ALER AYE A D  +EGVRY+E RFAPQL     + +  VLK+  +GL+RA++EFN R  VQ G EPPF++ I+ CA+R F   VSEYY    ++H   PP  V+  A+  LV AAIH +   H+PI G D+AG EAG+PA+  + A+  AHK F+  TVHAGEA+GPE
Sbjct:    7 IEKLPKTDLHVHLDGSLRPETLIELAKEYGVKLPSYTTGGLRETVFKESYESLVDYLKGFSYACAVLQSELALERAAYELAIDNQDEGVRYVEVRFAPQLHVHTHLSIENVLKSVNRGLDRAKSEFNRRKEVQSGVEPPFKYAIVVCALRFFTRGVSEYYDTLLSVHGFAPPKEVFAHASMELVRAAIHVRDTYHIPITGFDLAGAEAGYPADDHREAYAYAHKYFMMKTVHAGEAYGPE 246          
BLAST of NO03G04070 vs. NCBI_GenBank
Match: OPL19413.1 (adenosine deaminase [Candidatus Aegiribacteria bacterium MLS_C])

HSP 1 Score: 258.8 bits (660), Expect = 2.900e-65
Identity = 135/241 (56.02%), Postives = 164/241 (68.05%), Query Frame = 0
Query:  105 FLTEIPKTDLHVHLDGSPRLSTLIELAQTHGVELPAYTEEGLRTLVFHDAYDSLVDYLRGFPPIVRVMQQPGALERIAYEFAWDCINEGVRYIEPRFAPQLLATVEVDVIGVLKAAVQGLERAENEFNARTSVQDGSEPPFRFGIICCAMRVFMTDVSEYYRAFCALHKDEPPTLVYQLAASALVHAAIHAKKHLHLPIVGIDIAGQEAGFPAEAFQTAFEVAHKNFLGATVHAGEAFGPE 346
            FL ++PKTDLHVHLDG  R STLIELA+  G+ELP+YTEEGLR  VF D+YDSL +YLRGF     VM+    LERIAYE A D   EGVRYIE RFAPQL A+ E+D+I  ++A   GL RA+ EFN+R  V  G EPPF +GII CAMR F    S++YR FCA+H      +V+ LA+  L  A   A+    LP+VGID+AG E G+PA     AF  A ++FL  TVHAGEA+GPE
Sbjct:    5 FLEKLPKTDLHVHLDGCVRPSTLIELARESGIELPSYTEEGLRETVFKDSYDSLNEYLRGFAYTNEVMKTREQLERIAYEVAVDNQLEGVRYIEVRFAPQLHASEEMDIIDSIRAVDDGLGRAQREFNSRPEVAGGEEPPFHYGIIACAMRFFTPSFSDWYRRFCAMHSYTNQEMVFALASLELESAVARARWDEGLPVVGIDLAGSEDGWPAINHLEAFRRAQRHFLKKTVHAGEAYGPE 245          
BLAST of NO03G04070 vs. NCBI_GenBank
Match: PIR18027.1 (adenosine deaminase [Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_49_13])

HSP 1 Score: 258.1 bits (658), Expect = 5.000e-65
Identity = 126/243 (51.85%), Postives = 166/243 (68.31%), Query Frame = 0
Query:  102 LAEFLTEIPKTDLHVHLDGSPRLSTLIELAQTHGVELPAYTEEGLRTLVFHDAYDSLVDYLRGFPPIVRVMQQPGALERIAYEFAWDCINEGVRYIEPRFAPQLLATVEVDVIGVLKAAVQGLERAENEFNARTSVQDGSEPPFRFGIICCAMRVFMTDVSEYYRAFCALHKDEPPTLVYQLAASALVHAAIHAKKHLHLPIVGIDIAGQEAGFPAEAFQTAFEVAHKNFLGATVHAGEAFGP 345
            LA  + ++PKTDLHVHLDGS R+ TLIELA+ + + LP+YTEEGLR  VF D Y+SL +YL+GF     VMQ   ALERIAYE A D   EGVRYIEPRFAPQL  +  + +  +L +  +GLERA  E N++  +++G EPPF +GII  A+R+F  + S YY+ F   H+  P    Y LAA  LV A +  +  L +PIVG D+AG+E G+PAE ++ A + AHKNF+  T+HAGEA+GP
Sbjct:    5 LANVIKKLPKTDLHVHLDGSLRIPTLIELAKKYKITLPSYTEEGLRKQVFKDKYESLGEYLKGFAFTCAVMQTEEALERIAYELAMDNFAEGVRYIEPRFAPQLHVSPNLSIEQILSSVNKGLERAAKEINSKKEIKEGKEPPFAYGIIGSALRMFRKNFSYYYKNFLEAHEYSPKEEAYSLAAMELVRAMVKTRDELGIPIVGFDLAGEEVGYPAEDYKKAAQFAHKNFMQKTIHAGEAYGP 247          
BLAST of NO03G04070 vs. NCBI_GenBank
Match: OGR02819.1 (adenosine deaminase [Deltaproteobacteria bacterium RIFOXYA12_FULL_61_11])

HSP 1 Score: 253.8 bits (647), Expect = 9.400e-64
Identity = 125/242 (51.65%), Postives = 161/242 (66.53%), Query Frame = 0
Query:  104 EFLTEIPKTDLHVHLDGSPRLSTLIELAQTHGVELPAYTEEGLRTLVFHDAYDSLVDYLRGFPPIVRVMQQPGALERIAYEFAWDCINEGVRYIEPRFAPQLLATVEVDVIGVLKAAVQGLERAENEFNARTSVQDGSEPPFRFGIICCAMRVFMTDVSEYYRAFCALHKDEPPTLVYQLAASALVHAAIHAKKHLHLPIVGIDIAGQEAGFPAEAFQTAFEVAHKNFLGATVHAGEAFGPE 346
            +F+ ++PKTDLHVHLDGS R+ T+IEL++   + LP+YTE G+  LV+ + Y  L+DYL GF   + +MQ   ALERI YEF  D + EGVRY+E RFAPQ      +D   V+ A  +GLE+A  EFN+R  V+ G EPPF +GII CAMR F   +S Y+  F   H+  P   V+ LAA  LV AA+ A+  L LPIVG D+AG EAG PAE +  A+  AHK+FL  TVHAGEA+GPE
Sbjct:    2 DFIKKLPKTDLHVHLDGSVRIPTIIELSKERKLALPSYTEAGMMELVYKERYRDLLDYLEGFRYTIAIMQDDEALERIGYEFVMDNVEEGVRYVEVRFAPQFHMNDNLDFEHVMLAVNKGLEKATTEFNSRREVKSGKEPPFYYGIIICAMRAFGRGLSTYFDRFLDSHRYSPQDRVFSLAALELVQAAVKARDELGLPIVGFDLAGAEAGHPAEYYTEAYHYAHKHFLKKTVHAGEAYGPE 243          
BLAST of NO03G04070 vs. NCBI_GenBank
Match: OFZ55945.1 (adenosine deaminase [Bdellovibrionales bacterium RIFOXYC1_FULL_54_43] >OFZ84094.1 adenosine deaminase [Bdellovibrionales bacterium RIFOXYD1_FULL_55_31])

HSP 1 Score: 253.4 bits (646), Expect = 1.200e-63
Identity = 126/244 (51.64%), Postives = 165/244 (67.62%), Query Frame = 0
Query:  102 LAEFLTEIPKTDLHVHLDGSPRLSTLIELAQTHGVELPAYTEEGLRTLVFHDAYDSLVDYLRGFPPIVRVMQQPGALERIAYEFAWDCINEGVRYIEPRFAPQLLATVEVDVIGVLKAAVQGLERAENEFNARTSVQDGSEPPFRFGIICCAMRVFMTDVSEYYRAFCALHKDEPPTLVYQLAASALVHAAIHAKKHLHLPIVGIDIAGQEAGFPAEAFQTAFEVAHKNFLGATVHAGEAFGPE 346
            + EFL +IPK+DLHVHLDGS R+ TL ELA+   ++LP+YT +GL  L+F D Y+SLVDYL+ F   + VMQ P  LERI+YEFA D INEGV Y+E RFAPQ     ++D    L++  +G+ERA+ E+N    V+ G  PPF FGII CAMR F    S+Y+  F   H    P +++ LA+  L  A +H +  L +PIVG D+AG EAG PAE  + A++ AHK+FL ATVHAGEA+GPE
Sbjct:    1 MKEFLKKIPKSDLHVHLDGSVRVGTLAELAKKQKLKLPSYTVDGLNKLLFKDQYESLVDYLQCFGSTIPVMQTPENLERISYEFAQDNINEGVCYVEVRFAPQFHVGKKMDFEKTLQSVSKGMERAQKEYNNNPKVKSGELPPFCFGIIVCAMRAFGRGFSQYFDTFLDAHVYSEPKMIHALASYELAKACVHTRDKLGIPIVGFDLAGAEAGNPAEDHKPAYQFAHKHFLHATVHAGEAYGPE 244          
BLAST of NO03G04070 vs. NCBI_GenBank
Match: PIU58492.1 (adenosine deaminase family protein [Deltaproteobacteria bacterium CG07_land_8_20_14_0_80_38_7])

HSP 1 Score: 250.8 bits (639), Expect = 7.900e-63
Identity = 118/241 (48.96%), Postives = 163/241 (67.63%), Query Frame = 0
Query:  104 EFLTEIPKTDLHVHLDGSPRLSTLIELAQTHGVELPAYTEEGLRTLVFHDAYDSLVDYLRGFPPIVRVMQQPGALERIAYEFAWDCINEGVRYIEPRFAPQLLATVEVDVIGVLKAAVQGLERAENEFNARTSVQDGSEPPFRFGIICCAMRVFMTDVSEYYRAFCALHKDEPPTLVYQLAASALVHAAIHAKKHLHLPIVGIDIAGQEAGFPAEAFQTAFEVAHKNFLGATVHAGEAFGP 345
            +F+  +PKTD+H HLDGS R+STLIE+A+ + + LP+ TE+GL+ LVF + Y  L +YL+GF     VMQ P  +ER++YE A+D  NEGV YIEPRFAPQ      + +I  L +  +G +RA+ E N +  ++ G +PPF +GII CA+R+F  + S YYR    +H D P    + +A+  LV A I A+  L +PIVGID+AG E G+PAE  + A++VAHKNFL  TVHAGEA+GP
Sbjct:    8 DFIKALPKTDIHCHLDGSLRISTLIEIAKENKILLPSNTEQGLKDLVFKENYKDLNEYLQGFQYTTAVMQTPEGIERVSYELAFDAFNEGVYYIEPRFAPQRHVNASMSIIDTLASVAKGFDRAKKEINQKPEIKSGEKPPFEYGIIGCALRMFTEEYSPYYRNLFNMHPDMPDNERFVIASLDLVRAIIKARDELGIPIVGIDLAGAEKGYPAEIHKQAYDVAHKNFLKKTVHAGEAYGP 248          
The following BLAST results are available for this feature:
BLAST of NO03G04070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853436.15.600e-11773.43adenosine deaminase [Nannochloropsis gaditana CCMP... [more]
EWM29864.15.600e-11773.43adenosine deaminase [Nannochloropsis gaditana][more]
OIP35776.17.900e-7155.19adenosine deaminase [Deltaproteobacteria bacterium... [more]
OGQ84176.12.000e-6654.77adenosine deaminase [Deltaproteobacteria bacterium... [more]
PID38583.11.700e-6553.33adenosine deaminase [Proteobacteria bacterium] >PI... [more]
OPL19413.12.900e-6556.02adenosine deaminase [Candidatus Aegiribacteria bac... [more]
PIR18027.15.000e-6551.85adenosine deaminase [Deltaproteobacteria bacterium... [more]
OGR02819.19.400e-6451.65adenosine deaminase [Deltaproteobacteria bacterium... [more]
OFZ55945.11.200e-6351.64adenosine deaminase [Bdellovibrionales bacterium R... [more]
PIU58492.17.900e-6348.96adenosine deaminase family protein [Deltaproteobac... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL066nonsL066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR048ngnoR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005458NSK005458Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G04070.2NO03G04070.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G04070.1NO03G04070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100106g16gene768Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G04070.2NO03G04070.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G04070.1NO03G04070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G04070 ID=NO03G04070|Name=NO03G04070|organism=Nannochloropsis oceanica|type=gene|length=3072bp
AGTTTATCTCCCATTTCTTCTACATATTTATTTGCAATTTTATTTGCGCC
TGTCTCAATTCTCATCAAACGTTTGAGCACATGAGTCTACATAGCTTTTC
GTGCAACTCTGCCTGTGTCTTTGCCCGGGGATCGGCTGTCATTGCGCTTC
TAAGAGGTACTTAATCGTCACAGCAATCACAGAATCACGCGGATAGTTGA
AGGGGAGGTGTTCTGGAGCAGGGCGTGGCTTTAATCGTCGTAGACAGAGC
AGTCCTACCCGAATTGTCGTGGTTGAAAGCCGTGGGGCGGTCTTCTTCAA
TTGGCAGTAAACAGCAGTACCTTTGGCCCCACGAGGCCCGCTCTAGGGGA
CCATCCAAGCTCCAATTGCAGTGAATGCTACAGGTGGTGTGCAGGGCCTT
TCCACCGAATGTCATCTAGCAGAATGTAGCGGATAAGATCACACTATAAA
GGCCTGGCCGTGGCTTCAGGTAGGCGGGACGGGAGCCAGGCTCGGTGGTA
GTGAGGTGACGTCCGGAGGGGTCCTTACAAATCGATTGGAGGGGGAGGGA
AAGAATGCTGAAAGCGTGTGGAGCTTAAGATGAGGTGTTGAATTCGGTGT
TAACATTTTGTTTGTATGAATTCATGAAGGTTCTGAGACGCAGTGTTAGT
ATGACCAGACTCTGGTCACCAGAGGCAAGCGCGAATTTTGAGGCTCGAGA
TGGGGGGGTAAAAAGTGACTGTGCCCTGGCGGCTGCGTGTGTTCAGCAAC
AAAGTGTATGTGGGTTTTGCAAGAGTTGTGAGCTGTTTATAGCTACGGAG
ATGGGTACCGAACAGTCAGTCGCTCGAGCTTTCCTACTCACTCCCTCCTT
CCACACTGGCGTACAAAGGGGAAGACAGGCAAGCCCCTGGGACTCATCGG
ACGAGAACGTGGAAGAGCGCGAGCAGGGCGACAGCAGATTGATTTAGGGT
GGAGAATGAGCAGCAAACCCTCCTCCATGGTTGACTCAGCCGCCGTCGAC
CCACCCCTCAAGGCTCCCACACTTCCAGCCTCCACCAGTATCAGCAGCAC
CGCAGGCGCCACCTTCAGTCCTGCCAAAATTCAGGGGCTTCGAACCTCTG
CCGCCGCCAGCAGCAGCAGCAGCAGCATCAACTTAGACGGCGACGACAAC
GACGACAAGGACAGCTTGCTGCGGCGGATCAACAGTAATAGAAAGGATGG
CAAGGCCGCAGTACCCACGTGTCGACGCTGCCGCGCTTTCAAGCAGCTGG
GCCCGAAACTAGCGGAGTTTCTCACAGAGATACCCAAAACGGACTTACAC
GTACACCTGGACGGGTCGCCGCGCCTTAGCACGCTGATTGAGTTGGCCCA
GACACATGGGGTGGAACTGCCGGCATACACCGAAGAGGGCCTGCGGACCT
TAGTTTTTCATGATGCCTACGACAGCTTGGTAGACTACCTGCGTGGCTTT
CCGCCGATCGTCCGCGTCATGCAACAACCTGGGGCATTGGAACGGATCGC
CTACGAGTTTGCCTGGGATTGCATTAATGAAGGCGTGCGGTACATCGAGC
CAAGATTCGCTCCGCAGCTACTGGCGACGGTGGAGGTGGATGTCATAGGA
GTTTTGAAAGCAGCAGTACAGGGGTTGGAACGGGCTGAAAATGAGTTTAA
TGCCCGAACCTCCGTGCAAGATGGAAGCGAGCCTCCGTTTCGGTTTGGCA
TCATCTGCTGTGCAATGCGTGTCTTTATGACGGACGTTTCGGAGTATTAC
CGGGCTTTTTGCGCGTTGCACAAGGACGAACCCCCTACCCTTGTCTATCA
ACTCGCCGCTTCCGCACTCGTCCACGCCGCAATCCATGCCAAAAAGCACC
TCCACCTCCCTATAGTCGGTATTGACATTGCTGGCCAAGAAGCAGGATTT
CCAGCTGAAGCTTTTCAAACAGCTTTTGAAGTGGCACATAAAAATTTCTT
GGGGGCGACAGTACACGCTGGAGAGGCCTTCGGTCCAGAGGTAGGCCGGA
CATTGCTTCAATCAATGCCTTGCTGCTCGAATCTCTTCCCTCTCCCCTCC
CTCCCTTCCCCCCTCCCTCCTTCGAAAACAGGCCGTCTTCCAAGCCATCA
CGGACCTGCATTGCGAGAGACTAGGGCATGGATACCACCTGTTCAGCGTG
GACAAAGTGACAAAGAAGGAGAATCCAGCGGCGTTTGTGGAAGGCTTGGT
TCAGTATGTGGCCAAGAGAAGGATCATGCTCGAGGTGTGCTTGACCAGTA
ACCGGCAGACGATgtgagtggactcgaagggggcggcggggagggaggga
cggagggaaaaaaagggagggatggaaatggcgacttagtagcttgcacc
taaacattcccaacgactctttttctccctgaccttcctcctttccaccc
cttcctcccttcccccctccaagGGTGGAACTCCGCGACGACATTTCGAA
GCACGCCTTGAAGGACATGCTAGCCCACGGGATCTGCGTCTCCCTCTGCA
CCGACAACCGTCTCATAAGCAACACTACCGTCGTAAAGGAACTCCTGTTG
GCTATAGAGCATTTTGCGCTGACTCCCACTGAATTGAAGACCATCATTCT
AGAAGGTTTCAAGCGTAGTTTCTTCCCCGGCAAGTACCTAGAGAAGAGGG
TCTATGTCTCCCGCATGATCAACTACTACGAGCACATAGAGCGGAAGTAC
GGGTTGCATGATTGGTATTTGTCGGAAGAGAGTGTGCGTGAAGATAGACA
TAACCCTTGCCAGCAGCAGCAAAAACAACGACAACAGCAGCAGCAAGGGG
AAGAGCAGCAGCAGCCATCGGCAGAGGGCTTGGGTGCCTTGGTGTGCGAT
ATGCACGCGAATGGTGATCGATTGCAGACGTACAGTCCACAATGCAAAGG
CCCTACGCATTTCTCACAGAAGGAGGATGGAATCCTAAAGAGGGATAAGC
ACGACCATAATCAGCACTTGGACATGCCACCCGAAGTGTTCATATGATGG
AAGGAAACTAGGAGGGTAATCAAATGACCGGATGATTGATTGACACGAGT
AAATGAGGCAAATCTGAGTGTA
back to top

protein sequence of NO03G04070.2

>NO03G04070.2-protein ID=NO03G04070.2-protein|Name=NO03G04070.2|organism=Nannochloropsis oceanica|type=polypeptide|length=432bp
MSSKPSSMVDSAAVDPPLKAPTLPASTSISSTAGATFSPAKIQGLRTSAA
ASSSSSSINLDGDDNDDKDSLLRRINSNRKDGKAAVPTCRRCRAFKQLGP
KLAEFLTEIPKTDLHVHLDGSPRLSTLIELAQTHGVELPAYTEEGLRTLV
FHDAYDSLVDYLRGFPPIVRVMQQPGALERIAYEFAWDCINEGVRYIEPR
FAPQLLATVEVDVIGVLKAAVQGLERAENEFNARTSVQDGSEPPFRFGII
CCAMRVFMTDVSEYYRAFCALHKDEPPTLVYQLAASALVHAAIHAKKHLH
LPIVGIDIAGQEAGFPAEAFQTAFEVAHKNFLGATVHAGEAFGPEVGRTL
LQSMPCCSNLFPLPSLPSPLPPSKTGRLPSHHGPALRETRAWIPPVQRGQ
SDKEGESSGVCGRLGSVCGQEKDHARGVLDQ*
back to top

protein sequence of NO03G04070.1

>NO03G04070.1-protein ID=NO03G04070.1-protein|Name=NO03G04070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=597bp
MSSKPSSMVDSAAVDPPLKAPTLPASTSISSTAGATFSPAKIQGLRTSAA
ASSSSSSINLDGDDNDDKDSLLRRINSNRKDGKAAVPTCRRCRAFKQLGP
KLAEFLTEIPKTDLHVHLDGSPRLSTLIELAQTHGVELPAYTEEGLRTLV
FHDAYDSLVDYLRGFPPIVRVMQQPGALERIAYEFAWDCINEGVRYIEPR
FAPQLLATVEVDVIGVLKAAVQGLERAENEFNARTSVQDGSEPPFRFGII
CCAMRVFMTDVSEYYRAFCALHKDEPPTLVYQLAASALVHAAIHAKKHLH
LPIVGIDIAGQEAGFPAEAFQTAFEVAHKNFLGATVHAGEAFGPEAVFQA
ITDLHCERLGHGYHLFSVDKVTKKENPAAFVEGLVQYVAKRRIMLEVCLT
SNRQTMVELRDDISKHALKDMLAHGICVSLCTDNRLISNTTVVKELLLAI
EHFALTPTELKTIILEGFKRSFFPGKYLEKRVYVSRMINYYEHIERKYGL
HDWYLSEESVREDRHNPCQQQQKQRQQQQQGEEQQQPSAEGLGALVCDMH
ANGDRLQTYSPQCKGPTHFSQKEDGILKRDKHDHNQHLDMPPEVFI*
back to top
Synonyms
Publications