NO03G03970, NO03G03970 (gene) Nannochloropsis oceanica

Overview
NameNO03G03970
Unique NameNO03G03970
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1532
Alignment locationchr3:1159825..1161356 +

Link to JBrowse

Properties
Property NameValue
DescriptionRae1-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1159825..1161356 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006406mRNA export from nucleus
GO:0008152metabolic process
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR037631Gle2/RAE1
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Vocabulary: Cellular Component
TermDefinition
GO:0005623cell
Homology
BLAST of NO03G03970 vs. NCBI_GenBank
Match: EWM29795.1 (rae1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 707.2 bits (1824), Expect = 2.700e-200
Identity = 334/375 (89.07%), Postives = 349/375 (93.07%), Query Frame = 0
Query:    1 MSWGGLGGQTLGSTQQPAASSDLKLPHTQADGISSLAFAPSDTLNLVAAGSWDNSVRLWNLQEQASQGLGMPSQ-PNIMATPIGEIKHQAAVLDVCMSAEGNVFSGGCDNKAMMWTPNPAGGPPQTQQIAEHSAPIKCIAHVPQLPCVITGSWDQTVKFWDMRSPSPAHQLQLPHKVLTMDCRYPFLCVGTSNKEVYVYNLAGGIRPHKPGGAPIQSQIKAFQTRTLSMFPDCSGFAIGNIEGRVAIHYIDHRQGDKTVEFAYKCHRVDAKESPNKTAEIHAVNAISFHNRYGTFATAGADGSYAFWDKDKRQRLKPPTRMNAPISCASFNQRGDLYGYAVSYDWSKGSEHYNKQGPNDIYIHMVKEDEIKPKKK 375
            MSWGGL  QT+GST QP AS DLKLP TQADGISSLAFAPS+TLNLVAAGSWDNSVRLWNLQEQASQGLGM SQ P IMATP+GEIKHQ  VLDVCMS EGNVFS GCDNKAMMWTPNPAGG PQTQQIAEHSAPIKCIAHVPQLPC++TGSWDQTVKFWDMR  SPAHQ QLPHK+  MDCRYP+LCV TSNKEVYVYNLAGGIRP KPGGAPIQSQIKAFQTR LSMFPDCSGFAIGNIEGRVAIHYIDHRQGDKTVEFAYKCHR+DAK++PNKTAEI+AVN+ISFHNRYGTFATAGADGSYAFWDKDKRQRLK PTR NAPISCASFN RGDLYGYAVSYDWSKGSEHYNKQ PND++IH+VKEDEIKPKKK
Sbjct:   45 MSWGGLSSQTVGST-QPVASPDLKLPDTQADGISSLAFAPSETLNLVAAGSWDNSVRLWNLQEQASQGLGMASQGPGIMATPVGEIKHQGPVLDVCMSPEGNVFSAGCDNKAMMWTPNPAGGAPQTQQIAEHSAPIKCIAHVPQLPCIVTGSWDQTVKFWDMRQSSPAHQFQLPHKITAMDCRYPYLCVATSNKEVYVYNLAGGIRPLKPGGAPIQSQIKAFQTRCLSMFPDCSGFAIGNIEGRVAIHYIDHRQGDKTVEFAYKCHRIDAKDTPNKTAEIYAVNSISFHNRYGTFATAGADGSYAFWDKDKRQRLKAPTRFNAPISCASFNHRGDLYGYAVSYDWSKGSEHYNKQQPNDVFIHVVKEDEIKPKKK 418          
BLAST of NO03G03970 vs. NCBI_GenBank
Match: XP_001418430.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO96723.1 predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 291.6 bits (745), Expect = 3.500e-75
Identity = 158/374 (42.25%), Postives = 230/374 (61.50%), Query Frame = 0
Query:    1 MSWGGLGGQTLGSTQQPA-ASSDLKLPHTQADGISSLAFAPSDTLNLVAAGSWDNSVRLWNLQEQASQGLGMPSQPNIMATPIGEIKHQAAVLDVCMSAEG-NVFSGGCDNKAMMWTPNPAGGPPQTQQIAEHSAPIKCIAHVPQLPCVITGSWDQTVKFWDMRSPSPAHQLQLPHKVLTMDCRYPFLCVGTSNKEVYVYNLAGGIRPHKPGGAPIQSQIKAFQTRTLSMFPDCSGFAIGNIEGRVAIHYIDHRQGDKTVEFAYKCHRVDAKESPNKTAEIHAVNAISFHNRYGTFATAGADGSYAFWDKDKRQRLKPPTRMNAPISCASFNQRGDLYGYAVSYDWSKGSEHYNKQGPNDIYIHMVKEDEIKPK 373
            MSWG        +TQ PA  + D  + +   DGISSL+++P  T N + A +WD  V  +   E A+ G  MP             KH+A VL    S++G +VF+GGCDN A  W  + A G  Q  QIA+H   I+ +A + Q+  ++TGSWD+T+K+WD R P+PA Q+QLP +   +D  +P L VG + +++ ++NL+    P+K   +P++     +QTR ++ FPD SG+ +G+IEGRVA+ +++     K   F +KCHR         T +I+AVN+ISFH  +GTF TAGADG++ FWDKD +QRLK  T+ +APISC +FN+ G +Y YAVSYDWSKG ++     PN+IY+H V E E+KP+
Sbjct:    1 MSWG------QAATQAPANPNGDFLVANPPNDGISSLSWSP--TGNFLVATAWDGDVYCY---EVANNGQAMPK---------ASTKHEAPVLCSSWSSDGASVFTGGCDNIAKKW--DLASG--QATQIAQHDGAIRHMAWIEQVGLLVTGSWDRTLKYWDTRQPNPALQVQLPERCYALDVTHPLLVVGCAERQIQIFNLSNPQVPYKQLLSPLK-----YQTRCVATFPDRSGYLVGSIEGRVAVQHVEDNLQSK--NFTFKCHR-------EGTQDIYAVNSISFHPTFGTFVTAGADGNFNFWDKDSKQRLKNMTKCSAPISCGNFNRDGTIYAYAVSYDWSKGGDNPLSNTPNNIYLHAVNETEVKPR 336          
BLAST of NO03G03970 vs. NCBI_GenBank
Match: XP_008873869.1 (hypothetical protein H310_09551 [Aphanomyces invadans] >ETV97660.1 hypothetical protein H310_09551 [Aphanomyces invadans])

HSP 1 Score: 290.4 bits (742), Expect = 7.800e-75
Identity = 161/381 (42.26%), Postives = 222/381 (58.27%), Query Frame = 0
Query:    1 MSWGGLGGQTLGSTQQPAASSDLKLPHTQADGISSLAFAPSDTLNLVAAGSWDNSVRLWNLQEQASQGLGMPSQPNIMATPIGEIKHQAAVLDVCMSAEGN-VFSGGCDNKAMMWTPNPAGGPPQTQQIAEHSAPIKCIAHVPQLPCVITGSWDQTVKFWDMRSPSPAHQLQLPHKVLTMDCRYPFLCVGTSNKEVYVYNLAGGIRPHKPGG--APIQSQIKAFQTRTLSMFPDCSGFAIGNIEGRVAIHYIDHRQGDKTVEFAYKCHRVDAKESPNKTAEIHAVNAISFHNRYGTFATAGADGSYAFWDKDKRQRL----KPPTRMNAPISCASFNQRGDLYGYAVSYDWSKGSEHYNKQGPNDIYIHMVKEDEIKPKKK 375
            MS+GG G     +  +  A+SD  +P    D I  ++++P  T N++AAGSWDN VR W +Q Q +         N  A    +  H+  VL    S +G+ VFSG CD  AMMW     GG  Q QQIA+H  PI+ I H+ Q  CV+TGSWD+TVK+WD RSP P   +QL  +V  +D  YP + V T++K+V+ ++L       KP    A ++S +K +QTR ++ FPD +GFA G+IEGRV+I ++D +  D+  +F++K HR       N T+ I+ V +ISFH   G  AT GADGSYAFWDKD R+ L    K P      IS   FN+ G+++ YA SYDW KG EHYN Q  N I +H V  +++  K K
Sbjct:    1 MSFGGFGASAAATASK--AASDYDVPPDVPDSIQDISWSP--TANILAAGSWDNHVRCWEVQHQGA---------NFQAVARAQFAHKGPVLCTAFSGDGSTVFSGSCDKTAMMW---QLGGNSQGQQIAQHDQPIRSIQHIAQANCVVTGSWDKTVKYWDSRSPQPQATVQLSERVYALDVSYPLMVVATADKQVHCFDL------KKPSQIYATLKSTLK-YQTRCIAAFPDATGFAAGSIEGRVSIQHVDEKARDR--DFSFKAHR------DNTTSSIYPVTSISFHQNSGRIATTGADGSYAFWDKDARKLLTNFAKIPNYQG--ISAGKFNKTGEIFAYATSYDWHKGVEHYNPQARNVIRLHHVDANDMTVKVK 348          
BLAST of NO03G03970 vs. NCBI_GenBank
Match: XP_009034444.1 (hypothetical protein AURANDRAFT_58787 [Aureococcus anophagefferens] >EGB10866.1 hypothetical protein AURANDRAFT_58787 [Aureococcus anophagefferens])

HSP 1 Score: 290.0 bits (741), Expect = 1.000e-74
Identity = 159/360 (44.17%), Postives = 221/360 (61.39%), Query Frame = 0
Query:   20 SSDLKLPHTQADGISSLAFAPSDTLNLVAAGSWDNSVRLWNLQEQASQGLGMPSQPNIMATPIGEIKHQAAVLDVCMSAEG-NVFSGGCDNKAMMWTPNPAGGPPQTQQIAEHSAPIKCIAHVPQLPCVITGSWDQTVKFWDMRSPSPAHQLQLPHKVLTMDCRYPFLCVGTSNKEVYVYNL--AGGIRPHKPGGAPIQSQIKAFQTRTLSMFPDCSGFAIGNIEGRVAIHYIDHRQGDKTVEFAYKCHR--VDAKESPNKTAEIHAVNAISFHNRYGTFATAGADGSYAFWDKDKRQRLKPPTRMNAPISCASFNQRGDLYGYAVSYDWSKGSEHYNKQGPNDIYIHMVKEDEIKPKKK 375
            ++D  +P++ +DG+SSL F+ S     + A SW ++V  W  + Q ++G+G  +Q N+   P  +I   A  L   MSA+  NVF G  D  A MWT     G PQ Q   +H API+ I  VP L CV TGSWD+T+K WD+R P+P   +QLP +  +MD  +P + V T+ +++ VY+L  A   RP++   +P++      QTR +  FPD  GFAIG+IEGRVAIH++D +   K   FA+KCHR   D +     T  I+AVN I+FHN  GTFATAG+DG + FWDKD +QRL    R + PISCA+F+  G LY YA+SYDWS+GSE +    PN I +H V++DEI  + K
Sbjct:   13 NNDTVVPNSPSDGVSSLTFSASS--QFLVASSWASTVSCW--ETQVAEGMG-SAQVNV--APRAQITVPAPALCTSMSADSQNVFVGLGDGTAQMWTL----GQPQAQTFGKHDAPIRSIHFVPALSCVFTGSWDKTIKCWDVRQPTPTASVQLPERCYSMDVAHPLMVVATAERKLCVYDLSNANWQRPYRVEDSPLK-----HQTRCVRCFPDREGFAIGSIEGRVAIHHVDAKDAHK--NFAFKCHRDTQDGRAGQASTCNIYAVNDIAFHN-LGTFATAGSDGVFNFWDKDSKQRLMAFKRADRPISCAAFSPAGTLYAYALSYDWSRGSESHTPTDPNTIMLHKVQKDEITQRNK 353          
BLAST of NO03G03970 vs. NCBI_GenBank
Match: XP_009838669.1 (hypothetical protein H257_12962 [Aphanomyces astaci] >ETV71820.1 hypothetical protein H257_12962 [Aphanomyces astaci])

HSP 1 Score: 288.5 bits (737), Expect = 3.000e-74
Identity = 160/379 (42.22%), Postives = 220/379 (58.05%), Query Frame = 0
Query:    1 MSWGGLGGQTLGSTQQPAASSDLKLPHTQADGISSLAFAPSDTLNLVAAGSWDNSVRLWNLQEQASQGLGMPSQPNIMATPIGEIKHQAAVLDVCMSAEGN-VFSGGCDNKAMMWTPNPAGGPPQTQQIAEHSAPIKCIAHVPQLPCVITGSWDQTVKFWDMRSPSPAHQLQLPHKVLTMDCRYPFLCVGTSNKEVYVYNLAGGIRPHKPGG--APIQSQIKAFQTRTLSMFPDCSGFAIGNIEGRVAIHYIDHRQGDKTVEFAYKCHRVDAKESPNKTAEIHAVNAISFHNRYGTFATAGADGSYAFWDKDKRQRLKPPTRM--NAPISCASFNQRGDLYGYAVSYDWSKGSEHYNKQGPNDIYIHMVKEDEIKPKKK 375
            MS+GG G   +      AA +D  +P    D I  +A++P  T N++AAGSWDN VR W +Q+Q +         N  A    +  H+  VL    S +G+ VFSG CD  AMMW     GG  Q QQIA+H  PI+ I H+ Q  CV+TGSWD+TVK+WD RSP P   +QL  +V  +D  YP + V T++K+++ ++L       KP    A ++S +K +QTR ++ FPD SGFA G+IEGRV+I ++D +  D+  +F++K HR       N T  I+ V +ISFH   G  AT GADGSYAFWDKD R+ L    ++     IS   FN+ G+++ YA SYDW KG EHYN Q  N I +H V   ++  K K
Sbjct:    1 MSFGGFGSAAVTPAASRAA-ADYDVPPDVPDSIQDIAWSP--TANVLAAGSWDNHVRCWEVQQQGA---------NFQAVARAQFAHKGPVLCTAFSGDGSTVFSGSCDKTAMMW---QLGGNSQGQQIAQHDQPIRSIQHIAQANCVVTGSWDKTVKYWDTRSPQPQATVQLSDRVYALDVSYPLMVVATADKQIHCFDL------KKPSQIYATLKSSLK-YQTRCIAAFPDASGFAAGSIEGRVSIQHVDEKARDR--DFSFKAHR------DNTTNSIYPVTSISFHQNSGRIATTGADGSYAFWDKDARKLLTNFAKLPNYQGISVGKFNKTGEIFAYATSYDWHKGVEHYNPQARNVIRLHHVDAADMTVKAK 349          
BLAST of NO03G03970 vs. NCBI_GenBank
Match: XP_005702778.1 (hypothetical protein isoform 1 [Galdieria sulphuraria] >EME26258.1 hypothetical protein isoform 1 [Galdieria sulphuraria])

HSP 1 Score: 286.6 bits (732), Expect = 1.100e-73
Identity = 155/385 (40.26%), Postives = 224/385 (58.18%), Query Frame = 0
Query:    2 SWGGLGGQTLGSTQQPAA-----SSDLKLPHTQADGISSLAFAPSDTL--NLVAAGSWDNSVRLWNLQEQASQGLGMPSQPNIMATPIGEIKHQAAVLDVCMSAEG-NVFSGGCDNKAMMWTPNPAGGPPQTQQIAEHSAPIKCIAHVPQL----PCVITGSWDQTVKFWDMRSP--SPAHQLQLPHKVLTMDCRYPFLCVGTSNKEVYVYNLAGGIRPHKPGGAPIQSQIKAFQTRTLSMFPDCSGFAIGNIEGRVAIHYIDHRQGDKTVEFAYKCHRVDAKESPNKTAEIHAVNAISFHNRYGTFATAGADGSYAFWDKDKRQRLKPPTRMNAPISCASFNQRGDLYGYAVSYDWSKGSEHYNKQGPNDIYIHMVKEDEIKPK 373
            S+G  G  +L S     A     ++D  +  +  D +SS+AF+P      N + AGSWDN VRLW +Q                 +PIG I+H+A VLDV  SA+G  +FS GC+    MW P       Q Q IA+H API+C+     L    P V+TGSWD+T+K+WD R+   +P   + LP +V  MD   P L V T+N+   VY++     P++   +P++     +Q+R +++F D +GFA+G+IEGRV I YI  ++ D+ + FAYKCHR       ++   I AVNAISFH  +GTF+TAG+DG + FWDKD + RL    ++N PI+C +FN  G ++GYAV YDWS+G E+ +    N I +H VK +E++PK
Sbjct:    7 SFGNPGTSSLASAAGVTAGIHNPNNDKLVNQSPNDTVSSIAFSPKALAPNNFIVAGSWDNEVRLWQIQASGD------------TSPIGMIQHEAPVLDVAWSADGMTIFSVGCERTGKMWNP----ATNQVQPIAQHDAPIRCVRFASDLGTGSPAVVTGSWDKTLKYWDPRASTNTPLGTVTLPERVYAMDVLGPVLVVATANRRTLVYDIRNPTTPYRDKESPMR-----YQSRCVAIFTDMTGFALGSIEGRVGIEYI--QEADQKLSFAYKCHR-------DRNNRIFAVNAISFHPVFGTFSTAGSDGYFNFWDKDSKMRLHQFQQVNQPITCTAFNHDGTIFGYAVGYDWSQGVENRDPNAKNYILLHAVKPEEVRPK 361          
BLAST of NO03G03970 vs. NCBI_GenBank
Match: PRP77990.1 (hypothetical protein PROFUN_14078 [Planoprotostelium fungivorum] >PRP84124.1 hypothetical protein PROFUN_04115 [Planoprotostelium fungivorum])

HSP 1 Score: 286.6 bits (732), Expect = 1.100e-73
Identity = 160/367 (43.60%), Postives = 219/367 (59.67%), Query Frame = 0
Query:   10 TLGSTQQPAASSDLKLPHTQADGISSLAFAPSDTLNLVAAGSWD--NSVRLWNLQEQASQGLGMPSQPNIMATPIGEIKHQAAVLDVCMSAEG-NVFSGGCDNKAMMWTPNPAGGPPQTQQIAEHSAPIKCIAHVPQLPCVITGSWDQTVKFWDMRSPSPAHQLQLPHKVLTMDCRYPFLCVGTSNKEVYVYNLAGGIRPHKPGGAPIQSQIKAFQTRTLSMFPDCSGFAIGNIEGRVAIHYIDHRQGDKTVEFAYKCHRVDAKESPNKTAEIHAVNAISFHNRYGTFATAGADGSYAFWDKDKRQRLKPPTRMNAPISCASFNQRGDLYGYAVSYDWSK---GSEHYNKQGPNDIYIHMVKEDEIK 371
            TLG+T +     DL+LP    DGISSL+F+P    N + +GSWD  N VR W +      G G        A P   + H A VL    S++G +VFSG CD KA MW+     G  Q+QQI +H+  IK +A V QL C++T SWD+T+KFWD +SP+P H  QLP +V  MD R     V T+N+EV +Y++       K   +P++     +Q+RT++ F D SGFAIG+ EGRV I YI  +  D    FA+KCHRV+       T +++AVN IS H ++GTF+T G+DG++ FWDKD +QRLK   +++ PIS  ++N  G ++ YAVSYDW K   GSE+YN      I+IH   E EIK
Sbjct:    3 TLGNTPK-----DLELPSPPGDGISSLSFSPK--ANFLVSGSWDVSNQVRCWEV-----NGAG--------ANPKAAMSHDAPVLCTAWSSDGQSVFSGACDGKAKMWSL----GTGQSQQIGQHAGAIKSMAWVDQLNCLVTASWDKTLKFWDGKSPNPVHTTQLPERVYCMDIRGSLGVVATANREVLIYDIKNPANFFKKIPSPLK-----YQSRTIACFIDQSGFAIGSSEGRVGIQYI--QDSDSAKNFAFKCHRVN-------TVDVYAVNQISMHPQWGTFSTCGSDGTFTFWDKDSKQRLKQFPQLSQPISATAWNADGSIFAYAVSYDWHKVKQGSEYYNPNVKPQIFIHPTPESEIK 331          
BLAST of NO03G03970 vs. NCBI_GenBank
Match: CBJ31271.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 286.2 bits (731), Expect = 1.500e-73
Identity = 158/375 (42.13%), Postives = 220/375 (58.67%), Query Frame = 0
Query:   18 AASSDLKLPHTQADGISSLAFAPSDTLNLVAAGSWDNSVRLWNLQEQASQGLGMPSQPNIMATPIGEIKHQAAVLDVCMSAEG-NVFSGGCDNKAMMWTPNPAGGPPQT-QQIAEHSAPIKCIAHVPQLPCVITGSWDQTVKFWDMRSPSPAHQLQLPHKVLTMDCRYPFLCVGTSNKEVYVYNLAGGIRPHKPGGAPIQSQIKAFQTRTLSMFPDCSGFAIGNIEGRVAIHYIDHR---------------QGDKTVEFAYKCHRVDAKESPNKTAEIHAVNAISFHNRYGTFATAGADGSYAFWDKDKRQRLKP-PTRMNAPISCASFNQRGDLYGYAVSYDWSKGSEHYNKQGPNDIYIHMVKEDEIKPKKK 375
            A  +D  LP   +DG+S + F+P  T NL+ AGSWDN VR+W LQ       G  +QP I A P  +I H A VL    SA+G  VFSGG   +  MW+    G P  T QQI  H A +K +  +P++  V + SWD+TVKFWD R+ +PA  + L  +  +MD +   + V T+++++ VYNL G    + P    +      +QTR +S+FPD  GFA+G+IEGRV I Y   +                G+  + FA+KCHRV   +S      +++VN+I+FH +YGTFATAG+DG++ FWDKD RQRLK    +    IS   F+  G L+GYA+SYDWS+G EH N Q  N+I++H V +DEIKP+ K
Sbjct:    8 AGKADYALPSAPSDGVSDITFSP--TGNLITAGSWDNGVRVWELQR------GYGTQP-ITAVPKAQINHDAPVLCTDFSADGTKVFSGGASKQVNMWS---LGQPGTTGQQIGVHDAAVKTVRFIPEMNLVASASWDRTVKFWDTRTSTPAAVVTLCERAYSMDTKGAMMVVATADRKICVYNL-GSWTTNGPAPQTMTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFSEQAAKQQAASGYKPATTYGNTKLSFAFKCHRVAGAQS-----SVYSVNSIAFH-KYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGNTISVCKFSPDGGLFGYAMSYDWSQGVEHANPQATNNIFVHAVADDEIKPRPK 363          
BLAST of NO03G03970 vs. NCBI_GenBank
Match: OAX43137.1 (WD40 repeat-like protein [Rhizopogon vinicolor AM-OR11-026])

HSP 1 Score: 284.6 bits (727), Expect = 4.300e-73
Identity = 156/379 (41.16%), Postives = 224/379 (59.10%), Query Frame = 0
Query:    1 MSWGGLGGQTLGSTQQPAASSDLKLPHTQADGISSLAFAPSDTLNLVAAGSWDNSVRLWNLQEQASQGLGMPSQPNIMATPIGEIKHQAAVLDVCMSAEGN-VFSGGCDNKAMMWTPNPAGGPPQTQQIAEHSAPIKCIAHV--PQLPCVITGSWDQTVKFWDMRSPSPAHQLQLPHKVLTMDCRYPFLCVGTSNKEVYVYNLAGGIRPHKPGGAPIQSQIKAFQTRTLSMFPDC--SGFAIGNIEGRVAIHYIDHRQGDKTVEFAYKCHRVDAKESPNKTAEIHAVNAISFHNRYGTFATAGADGSYAFWDKDKRQRLKPPTRMNAPISCASFNQRGDLYGYAVSYDWSKGSEHYNKQGPNDIYIHMVKEDEIKPKKK 375
            MS+ G G  T  +T   AA  D+++P    D ISSL+F+P+   + +A GSWDN+VRL+ +      G G  +Q   M        HQ  VL VC + EGN V SGG DN A M+         Q+QQ+A+H AP+K +  +  PQ   + TGSWD+TVK+WDMR+P+P   +QLP +  +MD +YP + V T+ + + ++NL      +K   +P++     +QTR +S F +   SGFA+G++EGRVAI Y++ +  D    F++KCHR D   +    A ++AVN ISFH  +GTF+T G+DG+  FWDKD R RLK       PIS  +FN+ G ++ YAVSYDWSKG        PN + +H  K+DE+K + K
Sbjct:    1 MSFFGTG--TTSTTPAAAAEKDIEVPDAPTDSISSLSFSPA--ADYLAVGSWDNNVRLYEV------GAGGQTQGKAM------YSHQGPVLSVCWNKEGNKVISGGADNAARMFDITNG----QSQQVAQHDAPVKVVKWIETPQGGILATGSWDKTVKYWDMRTPAPVATVQLPERCYSMDVQYPLMVVATAERHIQIFNLTNPNAAYKTIASPLK-----WQTRVVSCFTNSTNSGFAVGSVEGRVAIQYVEEK--DSQNNFSFKCHRKDQTPNSKDQALVYAVNDISFHPVHGTFSTGGSDGTIHFWDKDARTRLKTFEAAPGPISATTFNRNGTIFAYAVSYDWSKGHSGMTPGHPNKLMLHACKDDEVKRRPK 352          
BLAST of NO03G03970 vs. NCBI_GenBank
Match: PSC71119.1 (Rae1 [Micractinium conductrix])

HSP 1 Score: 284.6 bits (727), Expect = 4.300e-73
Identity = 150/371 (40.43%), Postives = 217/371 (58.49%), Query Frame = 0
Query:    8 GQTLGSTQQPAASSDLKLPHTQADGISSLAFAPSDTLNLVAAGSWDNSVRLWNLQEQASQGLGMPSQPNIMATPIGEIKHQAAVLDVCMSAEGN-VFSGGCDNKAMMWTPNPAGGPPQTQQIAEHSAPIKCIAHVPQLPCVITGSWDQTVKFWDMRSPSPAHQLQLPHKVLTMDCRYPFLCVGTSNKEVYVYNLAGGIRPHKPGGA--PIQSQIKAFQTRTLSMFPDCSGFAIGNIEGRVAIHYIDHRQGDKTVEFAYKCHRVDAKESPNKTAEIHAVNAISFHNRYGTFATAGADGSYAFWDKDKRQRLKPPTRMNAPISCASFNQRGDLYGYAVSYDWSKG-SEHYNKQGPNDIYIHMVKEDEIKPKKK 375
            G   G+      + DL++P+T +D ISSL F+P+   NL+ A SW   V  W++Q                A P   I     V+    SA+G+ VF+GGCDN   MW         QTQQ+A H+AP++ +  + Q+  ++TGSWD+TVK+WDMRSP+  H  Q+P +V  MD     + VGT+++++ V+NL        PG     +QS +K +QTR +S FPD SG+ +G+IEGRVA+H+++     K   F +KCHR           +++AVN +SFH ++GTF TAG+DG+Y FWDKD +QRLK   + + PI C  FN+ G +Y YAVSYDWS+G SEH      N IY+H  +E E+K + +
Sbjct:    5 GTAFGAAANSNPNKDLEVPNTPSDSISSLKFSPAS--NLMVATSWSGQVLCWDVQATG------------QAIPKAAITSDKPVMCSAWSADGSTVFAGGCDNGVKMWNL----ATNQTQQLAAHAAPVRHVFFIQQMNMLVTGSWDKTVKYWDMRSPNAVHTQQMPERVYAMDVSQELMVVGTADRQIQVFNLG------NPGAVYKSLQSPLK-YQTRCISAFPDKSGYLVGSIEGRVAVHHVEDNLQSK--NFTFKCHR--------DGNDVYAVNNMSFHPQFGTFVTAGSDGAYNFWDKDSKQRLKAMAKCSMPIPCGDFNRDGSIYAYAVSYDWSRGYSEHNPATAKNYIYLHAPQEAEVKSRNR 340          
The following BLAST results are available for this feature:
BLAST of NO03G03970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29795.12.700e-20089.07rae1-like protein [Nannochloropsis gaditana][more]
XP_001418430.13.500e-7542.25predicted protein [Ostreococcus lucimarinus CCE990... [more]
XP_008873869.17.800e-7542.26hypothetical protein H310_09551 [Aphanomyces invad... [more]
XP_009034444.11.000e-7444.17hypothetical protein AURANDRAFT_58787 [Aureococcus... [more]
XP_009838669.13.000e-7442.22hypothetical protein H257_12962 [Aphanomyces astac... [more]
XP_005702778.11.100e-7340.26hypothetical protein isoform 1 [Galdieria sulphura... [more]
PRP77990.11.100e-7343.60hypothetical protein PROFUN_14078 [Planoprotosteli... [more]
CBJ31271.11.500e-7342.13conserved unknown protein [Ectocarpus siliculosus][more]
OAX43137.14.300e-7341.16WD40 repeat-like protein [Rhizopogon vinicolor AM-... [more]
PSC71119.14.300e-7340.43Rae1 [Micractinium conductrix][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005499NSK005499Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G03970.1NO03G03970.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|535816gene_1593Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100017g32gene805Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G03970.1NO03G03970.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G03970 ID=NO03G03970|Name=NO03G03970|organism=Nannochloropsis oceanica|type=gene|length=1532bp
CGGTGATGCGTAAACATGGTGTGAAGTGCTTGAGATCACGAGGAACATGG
CAAAACCGACAAGTCACAGTGAAAATCATCGACGATCGCTCGAGGCATAG
GACTCTTCATCGGATGTGACCTACCACTTGCCACCTCTCAATACTCCAAA
CTCCGCGAATGTACCCTACTACCACATGGTCGGGCATCCTTCATTGTAGT
TCTTGCCCTGCGGTCGGTGGGGCGCGACCTGAAATTTCCCGTCTCACGCA
ACACCATTATTCCCGTCACAGGCCCCTCCTTCTTTACGTCCTCCTTATTG
CGCTCGCGGCCATCACCGACCACTTCCATCGTCCATCTACAGCATCATCA
TGTCGTGGGGCGGTTTGGGGGGACAGACACTGGGGAGCACGCAGCAGCCT
GCCGCGTCATCAGACCTAAAGCTCCCACACACGCAAGCTGATGGCATCTC
GTCCCTGGCCTTTGCGCCGTCCGACACCCTGAACCTGGTAGCGGCAGGAT
CATGGGATAATTCCGTCCGCCTCTGGAATTTGCAAGAACAAGCCTCTCAA
GGTTTGGGCATGCCATCACAGCCTAATATCATGGCTACACCCATCGGTGA
GATAAAGCACCAAGCTGCTGTACTGGACGTATGCATGTCAGCCGAGGGCA
ACGTCTTTTCCGGAGGCTGCGACAACAAGGCCATGATGTGGACTCCTAAC
CCCGCCGGCGGCCCACCACAAACCCAGCAAATTGCCGAACACAGCGCACC
GATCAAATGCATTGCCCACGTGCCCCAGCTCCCCTGTGTCATCACAGGTT
CCTGGGACCAGACCGTCAAGTTCTGGGATATGAGGTCACCCTCTCCCGCG
CATCAGCTCCAGCTTCCTCACAAAGTTCTCACGATGGACTGCCGCTACCC
TTTTTTATGCGTGGGTACATCGAACAAAGAAGTCTATGTCTATAATCTGG
CCGGGGGCATTCGCCCGCATAAGCCAGGAGGGGCGCCTATTCAGTCGCAG
ATCAAGGCGTTCCAGACCCGGACATTGAGCATGTTTCCTGATTGCTCGGG
ATTCGCCATTGGGAATATCGAGGGACGTGTCGCAATCCATTACATTGATC
ATCGTCAGGGGGATAAAACGGTGGAGTTTGCGTACAAATGCCACAGGGTG
GACGCAAAGGAAAGTCCGAATAAGACCGCGGAGATCCACGCCGTCAATGC
CATTTCGTTCCACAATAGATACGGTACATTTGCCACAGCGGGCGCAGATG
GTTCGTACGCGTTCTGGGATAAGGATAAGCGGCAGCGGCTGAAGCCACCG
ACGAGGATGAATGCCCCCATTTCGTGTGCGTCGTTTAATCAACGAGGGGA
CTTGTATGGGTATGCCGTGAGTTACGATTGGAGTAAGGGTTCAGAGCATT
ACAATAAGCAGGGGCCCAATGATATTTATATTCACATGGTGAAGGAAGAT
GAGATTAAACCCAAGAAGAAGTAGAGTCGGTGGGGTTGGAGGGTGGTGGT
TAAAAAGCAACAGCGCTTGTATAAATACTGAC
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protein sequence of NO03G03970.1

>NO03G03970.1-protein ID=NO03G03970.1-protein|Name=NO03G03970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=375bp
MSWGGLGGQTLGSTQQPAASSDLKLPHTQADGISSLAFAPSDTLNLVAAG
SWDNSVRLWNLQEQASQGLGMPSQPNIMATPIGEIKHQAAVLDVCMSAEG
NVFSGGCDNKAMMWTPNPAGGPPQTQQIAEHSAPIKCIAHVPQLPCVITG
SWDQTVKFWDMRSPSPAHQLQLPHKVLTMDCRYPFLCVGTSNKEVYVYNL
AGGIRPHKPGGAPIQSQIKAFQTRTLSMFPDCSGFAIGNIEGRVAIHYID
HRQGDKTVEFAYKCHRVDAKESPNKTAEIHAVNAISFHNRYGTFATAGAD
GSYAFWDKDKRQRLKPPTRMNAPISCASFNQRGDLYGYAVSYDWSKGSEH
YNKQGPNDIYIHMVKEDEIKPKKK*
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Synonyms
Publications