NO03G03880, NO03G03880 (gene) Nannochloropsis oceanica

Overview
NameNO03G03880
Unique NameNO03G03880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2122
Alignment locationchr3:1139762..1141883 +

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Properties
Property NameValue
DescriptionAnia-6a type cyclin
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1139762..1141883 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf
IPR013763Cyclin-like
Homology
BLAST of NO03G03880 vs. NCBI_GenBank
Match: XP_005855202.1 (ania-6a type cyclin, partial [Nannochloropsis gaditana CCMP526] >EKU21157.1 ania-6a type cyclin, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 509.6 bits (1311), Expect = 1.300e-140
Identity = 243/284 (85.56%), Postives = 258/284 (90.85%), Query Frame = 0
Query:   42 DGEWHEVVLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRRSLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPLHPFSLV 326
            DGEWHEVVLLPR +LRESPS+RLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRA TSE AQ  P   PGK+PR FLFDAFT AMGCVFLASKLEEKPRAPRDV+FVFHHMCRRRR L PSLLEVTS RYHDLREALL IEKYVLKELGFGFY++MDHPHKFILYYIKTL G+P LAQRAWNYLNDSLRLDCCVR+RAELIAC AL+MA+RDL +KLPD PPW+ LFGASL E+R VGN ILSLY ++DEEGEE PLRWLEPLHP SLV
Sbjct:   39 DGEWHEVVLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRRGLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPLHPGSLV 322          
BLAST of NO03G03880 vs. NCBI_GenBank
Match: EWM29818.1 (ania-6a type cyclin [Nannochloropsis gaditana])

HSP 1 Score: 502.7 bits (1293), Expect = 1.600e-138
Identity = 239/279 (85.66%), Postives = 254/279 (91.04%), Query Frame = 0
Query:   42 DGEWHEVVLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRRSLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPLH 321
            DGEWHEVVLLPR +LRESPS+RLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRA TSE AQ  P   PGK+PR FLFDAFT AMGCVFLASKLEEKPRAPRDV+FVFHHMCRRRR L PSLLEVTS RYHDLREALL IEKYVLKELGFGFY++MDHPHKFILYYIKTL G+P LAQRAWNYLNDSLRLDCCVR+RAELIAC AL+MA+RDL +KLPD PPW+ LFGASL E+R VGN ILSLY ++DEEGEE PLRWLEPLH
Sbjct:   39 DGEWHEVVLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRRGLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPLH 317          
BLAST of NO03G03880 vs. NCBI_GenBank
Match: CBJ28076.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 276.6 bits (706), Expect = 1.900e-70
Identity = 141/280 (50.36%), Postives = 183/280 (65.36%), Query Frame = 0
Query:   42 DGEWHEVVLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRRSLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPE--LAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL 320
            D  WH  ++LPR+IL   PS    V    E  HRI+GCEL+QEAG+LLR PQVVM TAQ L  RFFYR+  T                    FDAF+ AMGC+ LA K+EE PR PR V+ VFH M  RR  + P+++ +       LR+ +L +E +VLKELGFGFYN+MDHPHKFILYY++ L    E  ++QRAWNY+NDSLR D  +R+R+E+IACAA++MA+R L IKLPD+PPW+ LF A + E+ E+ N IL+LYH+         + +LEPL
Sbjct:   58 DEAWHRTIILPRDILDNPPSGEHEVDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTK-------------------FDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRIGVDPAIV-IPPESLRVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRP-------KVAFLEPL 310          
BLAST of NO03G03880 vs. NCBI_GenBank
Match: GAY03478.1 (kinesin-like protein [Pythium insidiosum])

HSP 1 Score: 275.0 bits (702), Expect = 5.400e-70
Identity = 142/283 (50.18%), Postives = 188/283 (66.43%), Query Frame = 0
Query:   49 VLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL---HPFSL 325
            VLLP EIL  SPS++ G+P  VER HR +GCELI+EAG+LLR PQVVM TAQT+ HRFFYR++                      FDAF  A GCVFLA+K+EE+P+  +DV+ VF+ + RRR+    +L   LL+V    Y   R+ L+ +E+ +L +LGF  Y++M+HPHK+ILYYIK L GS  LAQ+AW YLNDSLR+D CVR+RAE IACAA+F+A+R L++KLP SPPWY LF      +  V  AI +LY ++        + WLEPL   +PF++
Sbjct: 1775 VLLPTEILSLSPSKQDGIPADVERDHRFWGCELIEEAGVLLRLPQVVMVTAQTMLHRFFYRKSLRE-------------------FDAFRVAFGCVFLAAKVEEQPKRMKDVLSVFYAIYRRRKWGKTALSQQLLDVDGDSYFLWRDWLVIVERQLLIDLGFSLYDIMEHPHKYILYYIKILDGSKALAQQAWGYLNDSLRIDLCVRHRAEAIACAAIFLASRTLQVKLPQSPPWYALFDVDHATLLAVAKAIWALYKRE-------KIVWLEPLTEVNPFAV 2031          
BLAST of NO03G03880 vs. NCBI_GenBank
Match: XP_024583933.1 (ania-6a type cyclin [Plasmopara halstedii] >CEG47564.1 ania-6a type cyclin [Plasmopara halstedii])

HSP 1 Score: 263.8 bits (673), Expect = 1.200e-66
Identity = 134/283 (47.35%), Postives = 184/283 (65.02%), Query Frame = 0
Query:   49 VLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL---HPFSL 325
            VLLP   L  SPS   GVP AVER HR FGCELIQEAG+LLR PQVVMATAQTL  RFFYR++                      FDAF  A+ C+FLA+K+EEKP+  +DV+ VF+ M RRR+    ++   L+++  + +   R  L+ +E+ VL +LGF  Y++ +HPHK++LYY+K L G   LAQ+AW Y+NDSLR D CVRY+A+ IACAA+F+A+R L++ LP++PPWY LF  + +++  V   I+ LY Q+        L+W+EPL   +PF +
Sbjct:   10 VLLPTPSLARSPSLEDGVPPAVERMHRSFGCELIQEAGVLLRLPQVVMATAQTLLQRFFYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVVSVFYAMYRRRKWHCSTVAQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSITEHPHKYVLYYVKVLDGRSALAQQAWGYINDSLRTDLCVRYKAQAIACAAIFLASRFLKVALPENPPWYKLFDVNKSQLYAVSIVIMGLYKQE-------KLQWVEPLTEANPFEV 266          
BLAST of NO03G03880 vs. NCBI_GenBank
Match: OWZ17776.1 (Cyclin-L1 [Phytophthora megakarya])

HSP 1 Score: 262.7 bits (670), Expect = 2.800e-66
Identity = 134/283 (47.35%), Postives = 183/283 (64.66%), Query Frame = 0
Query:   49 VLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL---HPFSL 325
            V+LP   L+ SPS   G+    ER HR FGCELIQEAG+LLR PQVV+ATAQTL HRF+YR++                      FDAF  A+ C+FLA+K+EEKP+  +DV+ VF+ M RRR+    ++   L++V  + +   R  L+ +E+ VL +LGF  YNV +HPHK++LYY+K L GS  LAQ+AW Y+NDSLR D CVRY+A++IACAA+F+A+R   + LP++PPWY LF    T++  V  AI+ LY Q+  E       WLEPL   +PF++
Sbjct:    8 VVLPASSLQRSPSLEDGISSDTERLHRSFGCELIQEAGVLLRLPQVVLATAQTLLHRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVLGVFYAMLRRRKWRRTTVTQQLVDVDGATFSQWRMWLIMVERQVLIDLGFSVYNVTEHPHKYVLYYVKVLDGSSTLAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYSLFDVEKTQLYAVSVAIMQLYKQEKVE-------WLEPLTETNPFAV 264          
BLAST of NO03G03880 vs. NCBI_GenBank
Match: XP_009539474.1 (hypothetical protein PHYSODRAFT_320213 [Phytophthora sojae] >EGZ05102.1 hypothetical protein PHYSODRAFT_320213 [Phytophthora sojae])

HSP 1 Score: 262.3 bits (669), Expect = 3.600e-66
Identity = 134/283 (47.35%), Postives = 180/283 (63.60%), Query Frame = 0
Query:   49 VLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL---HPFSL 325
            V+LP  +L  SPS+  GV    ER HR FGCELIQEAG+LLR PQV +ATAQTL  RF+YR++                      FDAF  A+ C+FLA+K+EEKP+  RDV+ VF+ M RRR+    ++   L+++  + +   R  L+ +E+ VL +LGF  YNV  HPHKF+LYY+K L GSP+LAQ+AW Y+NDSLR D CVRY A++IACAA+F+A+R  R+ LP+ PPWY LF     ++  V  AI+ LY Q         + WLEPL   +PF++
Sbjct:    9 VVLPASVLARSPSRADGVSAETERLHRAFGCELIQEAGVLLRLPQVALATAQTLLQRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIRDVLSVFYAMLRRRKWRRTTVAQQLVDLEGATFAQWRMWLIMVERQVLIDLGFSVYNVAQHPHKFVLYYVKVLDGSPQLAQQAWGYINDSLRADLCVRYSAQVIACAAIFLASRFQRVALPERPPWYQLFDVDQAQLYAVSVAIMELYKQP-------KIEWLEPLTETNPFAV 265          
BLAST of NO03G03880 vs. NCBI_GenBank
Match: KUF89889.1 (hypothetical protein AM588_10005054 [Phytophthora nicotianae] >KUG01430.1 Cyclin-L1-1 [Phytophthora nicotianae])

HSP 1 Score: 255.0 bits (650), Expect = 5.800e-64
Identity = 130/283 (45.94%), Postives = 181/283 (63.96%), Query Frame = 0
Query:   49 VLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL---HPFSL 325
            V+LP   L  SPS   G+   +ER HR FGCELIQEAG+LLR PQVVMATAQTL  RF+YR++                      FDAF  A+ C+FLA+K+EEKP+  +DV+ VF+ M RRR+    ++   L+++  + +   R  L+ +E+ VL +LGF  Y+V +HPHK++LYY+K L GS  LAQ+AW Y+NDSLR D CVRY+A++IACAA+F+A+R   + LP++PPWY LF    T++  V   I+ LY Q+        ++WLEPL   +PF +
Sbjct:   10 VVLPASSLARSPSLEDGIKPDIERLHRSFGCELIQEAGVLLRLPQVVMATAQTLLQRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVVGVFYAMFRRRKWQRSTVSQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSVTEHPHKYVLYYVKVLDGSSALAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYLLFDVDKTQLYAVSVVIMELYKQE-------KIQWLEPLTETNPFEV 266          
BLAST of NO03G03880 vs. NCBI_GenBank
Match: XP_002905581.1 (cyclin-L1, putative [Phytophthora infestans T30-4] >EEY68422.1 cyclin-L1, putative [Phytophthora infestans T30-4])

HSP 1 Score: 253.1 bits (645), Expect = 2.200e-63
Identity = 130/283 (45.94%), Postives = 178/283 (62.90%), Query Frame = 0
Query:   49 VLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL---HPFSL 325
            V+LP   L  SPS   GV    ER HR FGCELIQEAG+LLR PQVV ATAQTL  RF+YR++                      FDAF  A+ C+FLA+K+EEKP+  +DVI VF+ M RRR+    ++   L+++  + +   R  L+ +E+ VL +LGF  Y+V +HPHK++LYY+K L GS  LAQ+AW Y+NDSLR D CVRY+A++IACAA+F+A+R   + LP++PPWY LF    T++      I+ LY Q+        ++WLEPL   +PF +
Sbjct:   10 VVLPAPSLARSPSLEDGVTSTTERLHRSFGCELIQEAGVLLRLPQVVTATAQTLLQRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVIGVFYAMFRRRKWQRSTVSQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSVTEHPHKYVLYYVKVLDGSSALAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYSLFDVDKTQLYAASVVIMELYKQE-------KIQWLEPLTETNPFEV 266          
BLAST of NO03G03880 vs. NCBI_GenBank
Match: XP_008895207.1 (hypothetical protein PPTG_04693, partial [Phytophthora parasitica INRA-310] >ETI38696.1 hypothetical protein F443_15662, partial [Phytophthora parasitica P1569] >ETL85587.1 hypothetical protein L917_14927, partial [Phytophthora parasitica] >ETN19349.1 hypothetical protein PPTG_04693, partial [Phytophthora parasitica INRA-310] >ETO67459.1 hypothetical protein F444_15644, partial [Phytophthora parasitica P1976])

HSP 1 Score: 252.3 bits (643), Expect = 3.700e-63
Identity = 129/283 (45.58%), Postives = 180/283 (63.60%), Query Frame = 0
Query:   49 VLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL---HPFSL 325
            V+LP   L  SPS    +   +ER HR FGCELIQEAG+LLR PQVVMATAQTL  RF+YR++                      FDAF  A+ C+FLA+K+EEKP+  +DV+ VF+ M RRR+    ++   L+++  + +   R  L+ +E+ VL +LGF  Y+V +HPHK++LYY+K L GS  LAQ+AW Y+NDSLR D CVRY+A++IACAA+F+A+R   + LP++PPWY LF    T++  V   I+ LY Q+        ++WLEPL   +PF +
Sbjct:   10 VVLPASSLARSPSLEDDIKPDIERLHRSFGCELIQEAGVLLRLPQVVMATAQTLLQRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVVGVFYAMFRRRKWQRSTVSQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSVTEHPHKYVLYYVKVLDGSSALAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYLLFDVDKTQLYAVSVVIMELYKQE-------KIQWLEPLTETNPFEV 266          
The following BLAST results are available for this feature:
BLAST of NO03G03880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855202.11.300e-14085.56ania-6a type cyclin, partial [Nannochloropsis gadi... [more]
EWM29818.11.600e-13885.66ania-6a type cyclin [Nannochloropsis gaditana][more]
CBJ28076.11.900e-7050.36conserved unknown protein [Ectocarpus siliculosus][more]
GAY03478.15.400e-7050.18kinesin-like protein [Pythium insidiosum][more]
XP_024583933.11.200e-6647.35ania-6a type cyclin [Plasmopara halstedii] >CEG475... [more]
OWZ17776.12.800e-6647.35Cyclin-L1 [Phytophthora megakarya][more]
XP_009539474.13.600e-6647.35hypothetical protein PHYSODRAFT_320213 [Phytophtho... [more]
KUF89889.15.800e-6445.94hypothetical protein AM588_10005054 [Phytophthora ... [more]
XP_002905581.12.200e-6345.94cyclin-L1, putative [Phytophthora infestans T30-4]... [more]
XP_008895207.13.700e-6345.58hypothetical protein PPTG_04693, partial [Phytopht... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005509NSK005509Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G03880.1NO03G03880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|521731gene_1585Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100017g39gene812Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G03880.1NO03G03880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G03880 ID=NO03G03880|Name=NO03G03880|organism=Nannochloropsis oceanica|type=gene|length=2122bp
ACAGGACATACCAGACCAGCAGGAAGGAACAGGAGCGTCGACTTGCCCCA
TCGCGGGCGCCTTAGGCCTGAGGGCCACTGGCTTACCTGCAGCGGCATGA
TAGAGGCACCTAGCACCTTGCCCGCGATGCCATCCTTGGCAGCAGCCGCC
GCCGCAGCCGCGGAGGAAGGCATGCAACAGCAGGAGCGGGAGCAGGAGGA
GGAACACGACGACAGCGCTGACGGAGAATGGCACGAAGTGGTGTTGCTGC
CCCGGGAGATCTTGCGTGAGTCCCCCAGCCAACGCCTGGGCGTGCCTGAG
GCGGTGGAACGTCGCCACCGCATTTTTGGCTGTGAACTCATCCAGGAGGC
CGGCATCCTTCTCCGACAACCCCAAGTTGTCATGGCTACAGCTCAAACGC
TTTTCCATCGCTTCTTCTACCGCCGTGCATTCACCTCGGAAACAGCACAA
ACCCCCCCCGTCCTCACTCCTGGCAAAGCCCCCCGTGCGTTCCTTTTTGA
TGCCTTCACCGCCGCGATGGGCTGCGTCTTCCTCGCCTCCAAACTCGAGG
AGAAACCCCGGGCCCCCCGCGACGTCATCTTCGTCTTCCATCACATGTGT
CGGCGGCGTCGATCTCTCCCACCTTCCTTGCTGGAAGTCACCTCTTCTCG
GTACCATGACTTGCGCGAAGCCCTCTTGACAATTGAAAAGTACGTCCTGA
AAGAACTCGGCTTCGGGTTTTATAATGTGATGGACCACCCACATAAATTC
ATCCTCTATTACATCAAAACCTTGGGGGGTTCCCCGGAGCTTGCTCAGAG
GGCCTGGAATTATTTGAACGATAGTTTGAGGCTTGATTGCTGCGTGCGCT
ACCGCGCGGAGCTGATTGCATGTGCGGCTCTGTTTATGGCGGCGAGGGAT
TTGAGGATCAAGCTGCCTGATTCCCCGCCTTGGTATGGTTTATTCGGTGC
AAGCTTGACGGAGATTAGGGAGGTGGGGAATGCGATTCTGTCCTTGTACC
ATCAGCAGGACGAGGAAGGGGAGGAGGGACCGTTGAGGTGGTTAGAGCCG
TTACATCCCTTCAGTTTGGTGGGGATGGAGGCGTTGGGGAGGGTGGAGGG
TGGAGGGGGGGACGGAGGGAGGGGTACAGCGGGGGAGAATGCGAAGATGT
TGGTCACGACGACAAGTGGTGCACCGGGGAAAAAGAGGAGTGGGAGGGAG
GGCGGGGGGGAGGAAGGAGGGGAGGAGGAGGAGGATGCGGCAGTTACGGA
GGAGGTGGAACCCACGAGGGGGAAGAAGGAGAAGAGAGAAATGGAGAATG
GGCATGACGCGAATGAGGACAAAGGAGACGAGGATGGGGAGGAGTCTGAC
ACCGAGAAGAAGAGGCTGAGGAAGAAGAGAAAGAAGAGGCAGTCCCGCTC
CCGCTCGTCACGCTCCTCTTCCTCTTCCTCCTCTCCCCACTTCCCCTCCA
CCACTGCCACCGCTGGGGTTGCTGCTAGTGATGCTGCTGCAGACGGAGAG
AAGAAAGCAAGTAAACCCTCGTCCTTCTCTCGGTCGTTTCGACGCCAGAG
CCGATCGTCTAGCCCCCCCCTGCTGTCAAGGCCAGGAGCAGGAGCCGCGG
GAGGGAGAGAGGGAGGGAGGAGCGACGGAAACACAGGGGGCGGAGTCGTA
CCAGGAGCAGGAGTAAAAGTCGAGAGCGAGGTGGTGGAGGGAGAGAGCGT
GGACGGGAGAGGGAGAGGGAGAGGGAGAGGGTTAGAGGAAGGGAGGGAGG
GAGGAAAAGTGGGGGTGGGGGTGGGGGGAGAGATTATGACGACCGCCGGG
AGGGGGCTTCGCACCATCGAGGAGGAGCAAGGGAGGGAGGGAACAGTGGA
GGATCGCGGTCGAGGTATGATGTAGAGAGGAAGGAGAGTGGGAGTGGAAG
TGGGGCCTTAGGAGGGGGTACAGGGAAAAAGAGAGTGATAGATTTCGTAG
AGATCGATCGAGGGAGAGGTGAGAGGGAAGAGGGAGGAGGCAGTCAATAT
ATTATACGCGGGTTAGCAGTCTGGAGCCATTTAATTGATAATGGATGACA
ACGTCAAAAATATGAATGGGGATAGGAGGAGGATTGCAAAGAAGCAACTA
AGAGGCATGTTTGTACCATACC
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protein sequence of NO03G03880.1

>NO03G03880.1-protein ID=NO03G03880.1-protein|Name=NO03G03880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=593bp
MIEAPSTLPAMPSLAAAAAAAAEEGMQQQEREQEEEHDDSADGEWHEVVL
LPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQ
TLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKL
EEKPRAPRDVIFVFHHMCRRRRSLPPSLLEVTSSRYHDLREALLTIEKYV
LKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCV
RYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSL
YHQQDEEGEEGPLRWLEPLHPFSLVGMEALGRVEGGGGDGGRGTAGENAK
MLVTTTSGAPGKKRSGREGGGEEGGEEEEDAAVTEEVEPTRGKKEKREME
NGHDANEDKGDEDGEESDTEKKRLRKKRKKRQSRSRSSRSSSSSSSPHFP
STTATAGVAASDAAADGEKKASKPSSFSRSFRRQSRSSSPPLLSRPGAGA
AGGREGGRSDGNTGGGVVPGAGVKVESEVVEGESVDGRGRGRGRGLEEGR
EGGKVGVGVGGEIMTTAGRGLRTIEEEQGREGTVEDRGRGMM*
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Synonyms
Publications