NO03G03880, NO03G03880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G03880 vs. NCBI_GenBank
Match: XP_005855202.1 (ania-6a type cyclin, partial [Nannochloropsis gaditana CCMP526] >EKU21157.1 ania-6a type cyclin, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 509.6 bits (1311), Expect = 1.300e-140 Identity = 243/284 (85.56%), Postives = 258/284 (90.85%), Query Frame = 0 Query: 42 DGEWHEVVLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRRSLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPLHPFSLV 326 DGEWHEVVLLPR +LRESPS+RLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRA TSE AQ P PGK+PR FLFDAFT AMGCVFLASKLEEKPRAPRDV+FVFHHMCRRRR L PSLLEVTS RYHDLREALL IEKYVLKELGFGFY++MDHPHKFILYYIKTL G+P LAQRAWNYLNDSLRLDCCVR+RAELIAC AL+MA+RDL +KLPD PPW+ LFGASL E+R VGN ILSLY ++DEEGEE PLRWLEPLHP SLV Sbjct: 39 DGEWHEVVLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRRGLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPLHPGSLV 322
BLAST of NO03G03880 vs. NCBI_GenBank
Match: EWM29818.1 (ania-6a type cyclin [Nannochloropsis gaditana]) HSP 1 Score: 502.7 bits (1293), Expect = 1.600e-138 Identity = 239/279 (85.66%), Postives = 254/279 (91.04%), Query Frame = 0 Query: 42 DGEWHEVVLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRRSLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPLH 321 DGEWHEVVLLPR +LRESPS+RLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRA TSE AQ P PGK+PR FLFDAFT AMGCVFLASKLEEKPRAPRDV+FVFHHMCRRRR L PSLLEVTS RYHDLREALL IEKYVLKELGFGFY++MDHPHKFILYYIKTL G+P LAQRAWNYLNDSLRLDCCVR+RAELIAC AL+MA+RDL +KLPD PPW+ LFGASL E+R VGN ILSLY ++DEEGEE PLRWLEPLH Sbjct: 39 DGEWHEVVLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRRGLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPLH 317
BLAST of NO03G03880 vs. NCBI_GenBank
Match: CBJ28076.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 276.6 bits (706), Expect = 1.900e-70 Identity = 141/280 (50.36%), Postives = 183/280 (65.36%), Query Frame = 0 Query: 42 DGEWHEVVLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRRSLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPE--LAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL 320 D WH ++LPR+IL PS V E HRI+GCEL+QEAG+LLR PQVVM TAQ L RFFYR+ T FDAF+ AMGC+ LA K+EE PR PR V+ VFH M RR + P+++ + LR+ +L +E +VLKELGFGFYN+MDHPHKFILYY++ L E ++QRAWNY+NDSLR D +R+R+E+IACAA++MA+R L IKLPD+PPW+ LF A + E+ E+ N IL+LYH+ + +LEPL Sbjct: 58 DEAWHRTIILPRDILDNPPSGEHEVDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTK-------------------FDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRIGVDPAIV-IPPESLRVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRP-------KVAFLEPL 310
BLAST of NO03G03880 vs. NCBI_GenBank
Match: GAY03478.1 (kinesin-like protein [Pythium insidiosum]) HSP 1 Score: 275.0 bits (702), Expect = 5.400e-70 Identity = 142/283 (50.18%), Postives = 188/283 (66.43%), Query Frame = 0 Query: 49 VLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL---HPFSL 325 VLLP EIL SPS++ G+P VER HR +GCELI+EAG+LLR PQVVM TAQT+ HRFFYR++ FDAF A GCVFLA+K+EE+P+ +DV+ VF+ + RRR+ +L LL+V Y R+ L+ +E+ +L +LGF Y++M+HPHK+ILYYIK L GS LAQ+AW YLNDSLR+D CVR+RAE IACAA+F+A+R L++KLP SPPWY LF + V AI +LY ++ + WLEPL +PF++ Sbjct: 1775 VLLPTEILSLSPSKQDGIPADVERDHRFWGCELIEEAGVLLRLPQVVMVTAQTMLHRFFYRKSLRE-------------------FDAFRVAFGCVFLAAKVEEQPKRMKDVLSVFYAIYRRRKWGKTALSQQLLDVDGDSYFLWRDWLVIVERQLLIDLGFSLYDIMEHPHKYILYYIKILDGSKALAQQAWGYLNDSLRIDLCVRHRAEAIACAAIFLASRTLQVKLPQSPPWYALFDVDHATLLAVAKAIWALYKRE-------KIVWLEPLTEVNPFAV 2031
BLAST of NO03G03880 vs. NCBI_GenBank
Match: XP_024583933.1 (ania-6a type cyclin [Plasmopara halstedii] >CEG47564.1 ania-6a type cyclin [Plasmopara halstedii]) HSP 1 Score: 263.8 bits (673), Expect = 1.200e-66 Identity = 134/283 (47.35%), Postives = 184/283 (65.02%), Query Frame = 0 Query: 49 VLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL---HPFSL 325 VLLP L SPS GVP AVER HR FGCELIQEAG+LLR PQVVMATAQTL RFFYR++ FDAF A+ C+FLA+K+EEKP+ +DV+ VF+ M RRR+ ++ L+++ + + R L+ +E+ VL +LGF Y++ +HPHK++LYY+K L G LAQ+AW Y+NDSLR D CVRY+A+ IACAA+F+A+R L++ LP++PPWY LF + +++ V I+ LY Q+ L+W+EPL +PF + Sbjct: 10 VLLPTPSLARSPSLEDGVPPAVERMHRSFGCELIQEAGVLLRLPQVVMATAQTLLQRFFYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVVSVFYAMYRRRKWHCSTVAQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSITEHPHKYVLYYVKVLDGRSALAQQAWGYINDSLRTDLCVRYKAQAIACAAIFLASRFLKVALPENPPWYKLFDVNKSQLYAVSIVIMGLYKQE-------KLQWVEPLTEANPFEV 266
BLAST of NO03G03880 vs. NCBI_GenBank
Match: OWZ17776.1 (Cyclin-L1 [Phytophthora megakarya]) HSP 1 Score: 262.7 bits (670), Expect = 2.800e-66 Identity = 134/283 (47.35%), Postives = 183/283 (64.66%), Query Frame = 0 Query: 49 VLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL---HPFSL 325 V+LP L+ SPS G+ ER HR FGCELIQEAG+LLR PQVV+ATAQTL HRF+YR++ FDAF A+ C+FLA+K+EEKP+ +DV+ VF+ M RRR+ ++ L++V + + R L+ +E+ VL +LGF YNV +HPHK++LYY+K L GS LAQ+AW Y+NDSLR D CVRY+A++IACAA+F+A+R + LP++PPWY LF T++ V AI+ LY Q+ E WLEPL +PF++ Sbjct: 8 VVLPASSLQRSPSLEDGISSDTERLHRSFGCELIQEAGVLLRLPQVVLATAQTLLHRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVLGVFYAMLRRRKWRRTTVTQQLVDVDGATFSQWRMWLIMVERQVLIDLGFSVYNVTEHPHKYVLYYVKVLDGSSTLAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYSLFDVEKTQLYAVSVAIMQLYKQEKVE-------WLEPLTETNPFAV 264
BLAST of NO03G03880 vs. NCBI_GenBank
Match: XP_009539474.1 (hypothetical protein PHYSODRAFT_320213 [Phytophthora sojae] >EGZ05102.1 hypothetical protein PHYSODRAFT_320213 [Phytophthora sojae]) HSP 1 Score: 262.3 bits (669), Expect = 3.600e-66 Identity = 134/283 (47.35%), Postives = 180/283 (63.60%), Query Frame = 0 Query: 49 VLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL---HPFSL 325 V+LP +L SPS+ GV ER HR FGCELIQEAG+LLR PQV +ATAQTL RF+YR++ FDAF A+ C+FLA+K+EEKP+ RDV+ VF+ M RRR+ ++ L+++ + + R L+ +E+ VL +LGF YNV HPHKF+LYY+K L GSP+LAQ+AW Y+NDSLR D CVRY A++IACAA+F+A+R R+ LP+ PPWY LF ++ V AI+ LY Q + WLEPL +PF++ Sbjct: 9 VVLPASVLARSPSRADGVSAETERLHRAFGCELIQEAGVLLRLPQVALATAQTLLQRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIRDVLSVFYAMLRRRKWRRTTVAQQLVDLEGATFAQWRMWLIMVERQVLIDLGFSVYNVAQHPHKFVLYYVKVLDGSPQLAQQAWGYINDSLRADLCVRYSAQVIACAAIFLASRFQRVALPERPPWYQLFDVDQAQLYAVSVAIMELYKQP-------KIEWLEPLTETNPFAV 265
BLAST of NO03G03880 vs. NCBI_GenBank
Match: KUF89889.1 (hypothetical protein AM588_10005054 [Phytophthora nicotianae] >KUG01430.1 Cyclin-L1-1 [Phytophthora nicotianae]) HSP 1 Score: 255.0 bits (650), Expect = 5.800e-64 Identity = 130/283 (45.94%), Postives = 181/283 (63.96%), Query Frame = 0 Query: 49 VLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL---HPFSL 325 V+LP L SPS G+ +ER HR FGCELIQEAG+LLR PQVVMATAQTL RF+YR++ FDAF A+ C+FLA+K+EEKP+ +DV+ VF+ M RRR+ ++ L+++ + + R L+ +E+ VL +LGF Y+V +HPHK++LYY+K L GS LAQ+AW Y+NDSLR D CVRY+A++IACAA+F+A+R + LP++PPWY LF T++ V I+ LY Q+ ++WLEPL +PF + Sbjct: 10 VVLPASSLARSPSLEDGIKPDIERLHRSFGCELIQEAGVLLRLPQVVMATAQTLLQRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVVGVFYAMFRRRKWQRSTVSQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSVTEHPHKYVLYYVKVLDGSSALAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYLLFDVDKTQLYAVSVVIMELYKQE-------KIQWLEPLTETNPFEV 266
BLAST of NO03G03880 vs. NCBI_GenBank
Match: XP_002905581.1 (cyclin-L1, putative [Phytophthora infestans T30-4] >EEY68422.1 cyclin-L1, putative [Phytophthora infestans T30-4]) HSP 1 Score: 253.1 bits (645), Expect = 2.200e-63 Identity = 130/283 (45.94%), Postives = 178/283 (62.90%), Query Frame = 0 Query: 49 VLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL---HPFSL 325 V+LP L SPS GV ER HR FGCELIQEAG+LLR PQVV ATAQTL RF+YR++ FDAF A+ C+FLA+K+EEKP+ +DVI VF+ M RRR+ ++ L+++ + + R L+ +E+ VL +LGF Y+V +HPHK++LYY+K L GS LAQ+AW Y+NDSLR D CVRY+A++IACAA+F+A+R + LP++PPWY LF T++ I+ LY Q+ ++WLEPL +PF + Sbjct: 10 VVLPAPSLARSPSLEDGVTSTTERLHRSFGCELIQEAGVLLRLPQVVTATAQTLLQRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVIGVFYAMFRRRKWQRSTVSQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSVTEHPHKYVLYYVKVLDGSSALAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYSLFDVDKTQLYAASVVIMELYKQE-------KIQWLEPLTETNPFEV 266
BLAST of NO03G03880 vs. NCBI_GenBank
Match: XP_008895207.1 (hypothetical protein PPTG_04693, partial [Phytophthora parasitica INRA-310] >ETI38696.1 hypothetical protein F443_15662, partial [Phytophthora parasitica P1569] >ETL85587.1 hypothetical protein L917_14927, partial [Phytophthora parasitica] >ETN19349.1 hypothetical protein PPTG_04693, partial [Phytophthora parasitica INRA-310] >ETO67459.1 hypothetical protein F444_15644, partial [Phytophthora parasitica P1976]) HSP 1 Score: 252.3 bits (643), Expect = 3.700e-63 Identity = 129/283 (45.58%), Postives = 180/283 (63.60%), Query Frame = 0 Query: 49 VLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL---HPFSL 325 V+LP L SPS + +ER HR FGCELIQEAG+LLR PQVVMATAQTL RF+YR++ FDAF A+ C+FLA+K+EEKP+ +DV+ VF+ M RRR+ ++ L+++ + + R L+ +E+ VL +LGF Y+V +HPHK++LYY+K L GS LAQ+AW Y+NDSLR D CVRY+A++IACAA+F+A+R + LP++PPWY LF T++ V I+ LY Q+ ++WLEPL +PF + Sbjct: 10 VVLPASSLARSPSLEDDIKPDIERLHRSFGCELIQEAGVLLRLPQVVMATAQTLLQRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVVGVFYAMFRRRKWQRSTVSQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSVTEHPHKYVLYYVKVLDGSSALAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYLLFDVDKTQLYAVSVVIMELYKQE-------KIQWLEPLTETNPFEV 266 The following BLAST results are available for this feature:
BLAST of NO03G03880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G03880 ID=NO03G03880|Name=NO03G03880|organism=Nannochloropsis oceanica|type=gene|length=2122bpback to top protein sequence of NO03G03880.1 >NO03G03880.1-protein ID=NO03G03880.1-protein|Name=NO03G03880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=593bpback to top Synonyms
Publications
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