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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr3 | genome | chr3:1139762..1141883 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO03G03880.1 vs.
Match: XP_005855202.1 (ania-6a type cyclin, partial [Nannochloropsis gaditana CCMP526]; EKU21157.1 ania-6a type cyclin, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 517.7 bits (1332), Expect = 4.800e-143 Identity = 275/389 (70.69%), Postives = 305/389 (78.41%), Query Frame = 0
Query: 1 MIEAPSTLPAMPSLAAAAAAAAEEGMQQQEREQEEEHDDSADGEWHEVVLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRRSLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPLHPFSLVGMEALGRVEGGGGDGGRGTA-GENAKMLVTTTSGAPGKKRSGREGGGEEGGEEEEDAAVTEEVE 389
M++A +P P+ A A A E+ E + D S DGEWHEVVLLPR +LRESPS+RLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRA TSE AQ P PGK+PR FLFDAFT AMGCVFLASKLEEKPRAPRDV+FVFHHMCRRRR L PSLLEVTS RYHDLREALL IEKYVLKELGFGFY++MDHPHKFILYYIKTL G+P LAQRAWNYLNDSLRLDCCVR+RAELIAC AL+MA+RDL +KLPD PPW+ LFGASL E+R VGN ILSLY ++DEEGEE PLRWLEPLHP SLV MEAL +VEG G G+G GE ++ +PG + G EEG E+ ++E E
Sbjct: 1 MVQASPLVPTAPAQAEEAPATKED---VSLGELDGLEDVSVDGEWHEVVLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRRGLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPLHPGSLVAMEALRKVEGKEGKEGKGKGQGE--------STDSPG---AMEVDGAEEGSEKHGGGGASKEGE 375
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO03G03880.1 ID=NO03G03880.1|Name=NO03G03880.1|organism=Nannochloropsis oceanica|type=mRNA|length=2122bp ACAGGACATACCAGACCAGCAGGAAGGAACAGGAGCGTCGACTTGCCCCA TCGCGGGCGCCTTAGGCCTGAGGGCCACTGGCTTACCTGCAGCGGCATGA TAGAGGCACCTAGCACCTTGCCCGCGATGCCATCCTTGGCAGCAGCCGCC GCCGCAGCCGCGGAGGAAGGCATGCAACAGCAGGAGCGGGAGCAGGAGGA GGAACACGACGACAGCGCTGACGGAGAATGGCACGAAGTGGTGTTGCTGC CCCGGGAGATCTTGCGTGAGTCCCCCAGCCAACGCCTGGGCGTGCCTGAG GCGGTGGAACGTCGCCACCGCATTTTTGGCTGTGAACTCATCCAGGAGGC CGGCATCCTTCTCCGACAACCCCAAGTTGTCATGGCTACAGCTCAAACGC TTTTCCATCGCTTCTTCTACCGCCGTGCATTCACCTCGGAAACAGCACAA ACCCCCCCCGTCCTCACTCCTGGCAAAGCCCCCCGTGCGTTCCTTTTTGA TGCCTTCACCGCCGCGATGGGCTGCGTCTTCCTCGCCTCCAAACTCGAGG AGAAACCCCGGGCCCCCCGCGACGTCATCTTCGTCTTCCATCACATGTGT CGGCGGCGTCGATCTCTCCCACCTTCCTTGCTGGAAGTCACCTCTTCTCG GTACCATGACTTGCGCGAAGCCCTCTTGACAATTGAAAAGTACGTCCTGA AAGAACTCGGCTTCGGGTTTTATAATGTGATGGACCACCCACATAAATTC ATCCTCTATTACATCAAAACCTTGGGGGGTTCCCCGGAGCTTGCTCAGAG GGCCTGGAATTATTTGAACGATAGTTTGAGGCTTGATTGCTGCGTGCGCT ACCGCGCGGAGCTGATTGCATGTGCGGCTCTGTTTATGGCGGCGAGGGAT TTGAGGATCAAGCTGCCTGATTCCCCGCCTTGGTATGGTTTATTCGGTGC AAGCTTGACGGAGATTAGGGAGGTGGGGAATGCGATTCTGTCCTTGTACC ATCAGCAGGACGAGGAAGGGGAGGAGGGACCGTTGAGGTGGTTAGAGCCG TTACATCCCTTCAGTTTGGTGGGGATGGAGGCGTTGGGGAGGGTGGAGGG TGGAGGGGGGGACGGAGGGAGGGGTACAGCGGGGGAGAATGCGAAGATGT TGGTCACGACGACAAGTGGTGCACCGGGGAAAAAGAGGAGTGGGAGGGAG GGCGGGGGGGAGGAAGGAGGGGAGGAGGAGGAGGATGCGGCAGTTACGGA GGAGGTGGAACCCACGAGGGGGAAGAAGGAGAAGAGAGAAATGGAGAATG GGCATGACGCGAATGAGGACAAAGGAGACGAGGATGGGGAGGAGTCTGAC ACCGAGAAGAAGAGGCTGAGGAAGAAGAGAAAGAAGAGGCAGTCCCGCTC CCGCTCGTCACGCTCCTCTTCCTCTTCCTCCTCTCCCCACTTCCCCTCCA CCACTGCCACCGCTGGGGTTGCTGCTAGTGATGCTGCTGCAGACGGAGAG AAGAAAGCAAGTAAACCCTCGTCCTTCTCTCGGTCGTTTCGACGCCAGAG CCGATCGTCTAGCCCCCCCCTGCTGTCAAGGCCAGGAGCAGGAGCCGCGG GAGGGAGAGAGGGAGGGAGGAGCGACGGAAACACAGGGGGCGGAGTCGTA CCAGGAGCAGGAGTAAAAGTCGAGAGCGAGGTGGTGGAGGGAGAGAGCGT GGACGGGAGAGGGAGAGGGAGAGGGAGAGGGTTAGAGGAAGGGAGGGAGG GAGGAAAAGTGGGGGTGGGGGTGGGGGGAGAGATTATGACGACCGCCGGG AGGGGGCTTCGCACCATCGAGGAGGAGCAAGGGAGGGAGGGAACAGTGGA GGATCGCGGTCGAGGTATGATGTAGAGAGGAAGGAGAGTGGGAGTGGAAG TGGGGCCTTAGGAGGGGGTACAGGGAAAAAGAGAGTGATAGATTTCGTAG AGATCGATCGAGGGAGAGGTGAGAGGGAAGAGGGAGGAGGCAGTCAATAT ATTATACGCGGGTTAGCAGTCTGGAGCCATTTAATTGATAATGGATGACA ACGTCAAAAATATGAATGGGGATAGGAGGAGGATTGCAAAGAAGCAACTA AGAGGCATGTTTGTACCATACC back to topprotein sequence of NO03G03880.1 >NO03G03880.1-protein ID=NO03G03880.1-protein|Name=NO03G03880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=593bp MIEAPSTLPAMPSLAAAAAAAAEEGMQQQEREQEEEHDDSADGEWHEVVL LPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQ TLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKL EEKPRAPRDVIFVFHHMCRRRRSLPPSLLEVTSSRYHDLREALLTIEKYV LKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCV RYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSL YHQQDEEGEEGPLRWLEPLHPFSLVGMEALGRVEGGGGDGGRGTAGENAK MLVTTTSGAPGKKRSGREGGGEEGGEEEEDAAVTEEVEPTRGKKEKREME NGHDANEDKGDEDGEESDTEKKRLRKKRKKRQSRSRSSRSSSSSSSPHFP STTATAGVAASDAAADGEKKASKPSSFSRSFRRQSRSSSPPLLSRPGAGA AGGREGGRSDGNTGGGVVPGAGVKVESEVVEGESVDGRGRGRGRGLEEGR EGGKVGVGVGGEIMTTAGRGLRTIEEEQGREGTVEDRGRGMM* back to topmRNA from alignment at chr3:1139762..1141883+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO03G03880.1 ID=NO03G03880.1|Name=NO03G03880.1|organism=Nannochloropsis oceanica|type=mRNA|length=2122bp|location=Sequence derived from alignment at chr3:1139762..1141883+ (Nannochloropsis oceanica) ACAGGACATACCAGACCAGCAGGAAGGAACAGGAGCGTCGACTTGCCCCA
TCGCGGGCGCCTTAGGCCTGAGGGCCACTGGCTTACCTGCAGCGGCATGA
TAGAGGCACCTAGCACCTTGCCCGCGATGCCATCCTTGGCAGCAGCCGCC
GCCGCAGCCGCGGAGGAAGGCATGCAACAGCAGGAGCGGGAGCAGGAGGA
GGAACACGACGACAGCGCTGACGGAGAATGGCACGAAGTGGTGTTGCTGC
CCCGGGAGATCTTGCGTGAGTCCCCCAGCCAACGCCTGGGCGTGCCTGAG
GCGGTGGAACGTCGCCACCGCATTTTTGGCTGTGAACTCATCCAGGAGGC
CGGCATCCTTCTCCGACAACCCCAAGTTGTCATGGCTACAGCTCAAACGC
TTTTCCATCGCTTCTTCTACCGCCGTGCATTCACCTCGGAAACAGCACAA
ACCCCCCCCGTCCTCACTCCTGGCAAAGCCCCCCGTGCGTTCCTTTTTGA
TGCCTTCACCGCCGCGATGGGCTGCGTCTTCCTCGCCTCCAAACTCGAGG
AGAAACCCCGGGCCCCCCGCGACGTCATCTTCGTCTTCCATCACATGTGT
CGGCGGCGTCGATCTCTCCCACCTTCCTTGCTGGAAGTCACCTCTTCTCG
GTACCATGACTTGCGCGAAGCCCTCTTGACAATTGAAAAGTACGTCCTGA
AAGAACTCGGCTTCGGGTTTTATAATGTGATGGACCACCCACATAAATTC
ATCCTCTATTACATCAAAACCTTGGGGGGTTCCCCGGAGCTTGCTCAGAG
GGCCTGGAATTATTTGAACGATAGTTTGAGGCTTGATTGCTGCGTGCGCT
ACCGCGCGGAGCTGATTGCATGTGCGGCTCTGTTTATGGCGGCGAGGGAT
TTGAGGATCAAGCTGCCTGATTCCCCGCCTTGGTATGGTTTATTCGGTGC
AAGCTTGACGGAGATTAGGGAGGTGGGGAATGCGATTCTGTCCTTGTACC
ATCAGCAGGACGAGGAAGGGGAGGAGGGACCGTTGAGGTGGTTAGAGCCG
TTACATCCCTTCAGTTTGGTGGGGATGGAGGCGTTGGGGAGGGTGGAGGG
TGGAGGGGGGGACGGAGGGAGGGGTACAGCGGGGGAGAATGCGAAGATGT
TGGTCACGACGACAAGTGGTGCACCGGGGAAAAAGAGGAGTGGGAGGGAG
GGCGGGGGGGAGGAAGGAGGGGAGGAGGAGGAGGATGCGGCAGTTACGGA
GGAGGTGGAACCCACGAGGGGGAAGAAGGAGAAGAGAGAAATGGAGAATG
GGCATGACGCGAATGAGGACAAAGGAGACGAGGATGGGGAGGAGTCTGAC
ACCGAGAAGAAGAGGCTGAGGAAGAAGAGAAAGAAGAGGCAGTCCCGCTC
CCGCTCGTCACGCTCCTCTTCCTCTTCCTCCTCTCCCCACTTCCCCTCCA
CCACTGCCACCGCTGGGGTTGCTGCTAGTGATGCTGCTGCAGACGGAGAG
AAGAAAGCAAGTAAACCCTCGTCCTTCTCTCGGTCGTTTCGACGCCAGAG
CCGATCGTCTAGCCCCCCCCTGCTGTCAAGGCCAGGAGCAGGAGCCGCGG
GAGGGAGAGAGGGAGGGAGGAGCGACGGAAACACAGGGGGCGGAGTCGTA
CCAGGAGCAGGAGTAAAAGTCGAGAGCGAGGTGGTGGAGGGAGAGAGCGT
GGACGGGAGAGGGAGAGGGAGAGGGAGAGGGTTAGAGGAAGGGAGGGAGG
GAGGAAAAGTGGGGGTGGGGGTGGGGGGAGAGATTATGACGACCGCCGGG
AGGGGGCTTCGCACCATCGAGGAGGAGCAAGGGAGGGAGGGAACAGTGGA
GGATCGCGGTCGAGGTATGATGTAGAGAGGAAGGAGAGTGGGAGTGGAAG
TGGGGCCTTAGGAGGGGGTACAGGGAAAAAGAGAGTGATAGATTTCGTAG
AGATCGATCGAGGGAGAGGTGAGAGGGAAGAGGGAGGAGGCAGTCAATAT
ATTATACGCGGGTTAGCAGTCTGGAGCCATTTAATTGATAATGGATGACA
ACGTCAAAAATATGAATGGGGATAGGAGGAGGATTGCAAAGAAGCAACTA
AGAGGCATGTTTGTACCATACC back to topCoding sequence (CDS) from alignment at chr3:1139762..1141883+ >NO03G03880.1 ID=NO03G03880.1|Name=NO03G03880.1|organism=Nannochloropsis oceanica|type=CDS|length=1779bp|location=Sequence derived from alignment at chr3:1139762..1141883+ (Nannochloropsis oceanica) ATGATAGAGGCACCTAGCACCTTGCCCGCGATGCCATCCTTGGCAGCAGC CGCCGCCGCAGCCGCGGAGGAAGGCATGCAACAGCAGGAGCGGGAGCAGG AGGAGGAACACGACGACAGCGCTGACGGAGAATGGCACGAAGTGGTGTTG CTGCCCCGGGAGATCTTGCGTGAGTCCCCCAGCCAACGCCTGGGCGTGCC TGAGGCGGTGGAACGTCGCCACCGCATTTTTGGCTGTGAACTCATCCAGG AGGCCGGCATCCTTCTCCGACAACCCCAAGTTGTCATGGCTACAGCTCAA ACGCTTTTCCATCGCTTCTTCTACCGCCGTGCATTCACCTCGGAAACAGC ACAAACCCCCCCCGTCCTCACTCCTGGCAAAGCCCCCCGTGCGTTCCTTT TTGATGCCTTCACCGCCGCGATGGGCTGCGTCTTCCTCGCCTCCAAACTC GAGGAGAAACCCCGGGCCCCCCGCGACGTCATCTTCGTCTTCCATCACAT GTGTCGGCGGCGTCGATCTCTCCCACCTTCCTTGCTGGAAGTCACCTCTT CTCGGTACCATGACTTGCGCGAAGCCCTCTTGACAATTGAAAAGTACGTC CTGAAAGAACTCGGCTTCGGGTTTTATAATGTGATGGACCACCCACATAA ATTCATCCTCTATTACATCAAAACCTTGGGGGGTTCCCCGGAGCTTGCTC AGAGGGCCTGGAATTATTTGAACGATAGTTTGAGGCTTGATTGCTGCGTG CGCTACCGCGCGGAGCTGATTGCATGTGCGGCTCTGTTTATGGCGGCGAG GGATTTGAGGATCAAGCTGCCTGATTCCCCGCCTTGGTATGGTTTATTCG GTGCAAGCTTGACGGAGATTAGGGAGGTGGGGAATGCGATTCTGTCCTTG TACCATCAGCAGGACGAGGAAGGGGAGGAGGGACCGTTGAGGTGGTTAGA GCCGTTACATCCCTTCAGTTTGGTGGGGATGGAGGCGTTGGGGAGGGTGG AGGGTGGAGGGGGGGACGGAGGGAGGGGTACAGCGGGGGAGAATGCGAAG ATGTTGGTCACGACGACAAGTGGTGCACCGGGGAAAAAGAGGAGTGGGAG GGAGGGCGGGGGGGAGGAAGGAGGGGAGGAGGAGGAGGATGCGGCAGTTA CGGAGGAGGTGGAACCCACGAGGGGGAAGAAGGAGAAGAGAGAAATGGAG AATGGGCATGACGCGAATGAGGACAAAGGAGACGAGGATGGGGAGGAGTC TGACACCGAGAAGAAGAGGCTGAGGAAGAAGAGAAAGAAGAGGCAGTCCC GCTCCCGCTCGTCACGCTCCTCTTCCTCTTCCTCCTCTCCCCACTTCCCC TCCACCACTGCCACCGCTGGGGTTGCTGCTAGTGATGCTGCTGCAGACGG AGAGAAGAAAGCAAGTAAACCCTCGTCCTTCTCTCGGTCGTTTCGACGCC AGAGCCGATCGTCTAGCCCCCCCCTGCTGTCAAGGCCAGGAGCAGGAGCC GCGGGAGGGAGAGAGGGAGGGAGGAGCGACGGAAACACAGGGGGCGGAGT CGTACCAGGAGCAGGAGTAAAAGTCGAGAGCGAGGTGGTGGAGGGAGAGA GCGTGGACGGGAGAGGGAGAGGGAGAGGGAGAGGGTTAGAGGAAGGGAGG GAGGGAGGAAAAGTGGGGGTGGGGGTGGGGGGAGAGATTATGACGACCGC CGGGAGGGGGCTTCGCACCATCGAGGAGGAGCAAGGGAGGGAGGGAACAG TGGAGGATCGCGGTCGAGGTATGATGTAG back to top
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