NO03G03870, NO03G03870 (gene) Nannochloropsis oceanica

Overview
NameNO03G03870
Unique NameNO03G03870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1692
Alignment locationchr3:1137391..1139082 -

Link to JBrowse

Properties
Property NameValue
Descriptionhistone deacetylase 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1137391..1139082 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016575histone deacetylation
GO:0016043cellular component organization
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0004407histone deacetylase activity
GO:0016787hydrolase activity
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR023696Ureohydrolase_domain
IPR023801His_deacetylse_dom
IPR000286His_deacetylse
IPR003084His_deacetylse_1
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
BLAST of NO03G03870 vs. NCBI_GenBank
Match: EWM29801.1 (histone deacetylase 1 [Nannochloropsis gaditana])

HSP 1 Score: 761.1 bits (1964), Expect = 1.800e-216
Identity = 356/398 (89.45%), Postives = 377/398 (94.72%), Query Frame = 0
Query:    1 MSSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELLKFHSEEYVNFLSRINPDMGRNLSTNLH-KFNVGEFTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKVTDIAVNWSGGLHHAKKSEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHKYGDFFPGTGNIKDTGSKAGKNYSVNVPLEDGIDDASYEMVFKPVMEKVMEVYQPTAVVLQCGADSLTGDRLGCFNLTLKGHAKCVEMMKSYNVPLLILGGGGYAIRNVARCWAYETAVLLEEEVSDDIPKNDYLDYYAPDYKLHLPPGTKENQNSLEGLEEIKLQILQQLGQIQGAPSVQLQEVPPDWATGGGKGGEKE 398
            MSSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQEL KFHS+EYVNFLSR+NPDMGR LS+++H KFNVGE+TDCPIFDGMMEFCKIYTGCSIDGAQKLNHK+TD+AVNWSGGLHHAKK EASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFH+YGDFFPGTGNIKD G+K GK YSVNVPLE+GIDDASYE VF+PVM KVMEVYQP+AVVLQCGADSL+GDRLGCFNLTL+GHAKCVEMMK YNVPLLILGGGGYAIRNVARCWA+ET+VLLEEEVSD+IP+NDY DYYAPDYKLHLPPGT ENQNS EGLE IK+QILQQL QI GAPSVQ+QEVPPDWAT    GGE E
Sbjct:   50 MSSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELQKFHSQEYVNFLSRVNPDMGRTLSSSVHSKFNVGEYTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKITDVAVNWSGGLHHAKKGEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHRYGDFFPGTGNIKDVGAKNGKYYSVNVPLEEGIDDASYERVFRPVMAKVMEVYQPSAVVLQCGADSLSGDRLGCFNLTLRGHAKCVEMMKGYNVPLLILGGGGYAIRNVARCWAFETSVLLEEEVSDEIPRNDYYDYYAPDYKLHLPPGTTENQNSTEGLEAIKVQILQQLSQIPGAPSVQMQEVPPDWATNERGGGEDE 447          
BLAST of NO03G03870 vs. NCBI_GenBank
Match: EJK57351.1 (hypothetical protein THAOC_22614 [Thalassiosira oceanica])

HSP 1 Score: 596.7 bits (1537), Expect = 5.800e-167
Identity = 268/386 (69.43%), Postives = 321/386 (83.16%), Query Frame = 0
Query:    3 SKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELLKFHSEEYVNFLSRINPDMGRNLSTNLHKFNVGEFTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKVTDIAVNWSGGLHHAKKSEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHKYGDFFPGTGNIKDTGSKAGKNYSVNVPLEDGIDDASYEMVFKPVMEKVMEVYQPTAVVLQCGADSLTGDRLGCFNLTLKGHAKCVEMMKSYNVPLLILGGGGYAIRNVARCWAYETAVLLEEEVSDDIPKNDYLDYYAPDYKLHLPPGTKENQNSLEGLEEIKLQILQQLGQIQGAPSVQLQEVPPDWAT 389
            SK+RVSYFY  DVGH+YYGP HPMKPHR+K+ HHL+L YGLYRKMEVYR H A+  E+  FHSE+Y+NFL+++ PD  R  S  + KFNVGE+TDCP+FDG+ EF ++YTG S+DGA KLN    D+AVNWSGGLHHAKKSEASGFCYINDIVLAILELLK H RVLYIDID+HHGDGVEEAFYCTDRVMT S HKYGDFFPGTG+IKDTG+K G  YSVNVPL  G+ D +YE +FKPVM+K+MEV++P A+VLQCGADSLTGDRLGCFNL+LKGHA+CV   KS+ VP L+LGGGGY IRNVARCWAYET+VLL+ ++ D+IP NDY +YYAPD+KLHL P  +EN N+   +E +++ +L QL  ++GAPSV + EVPPD+ T
Sbjct:    4 SKQRVSYFYQPDVGHFYYGPSHPMKPHRIKMAHHLILSYGLYRKMEVYRSHPASPAEMSAFHSEDYINFLAKVTPDNLRGYSNQMQKFNVGEYTDCPVFDGLYEFTQLYTGASLDGAVKLNRGDCDVAVNWSGGLHHAKKSEASGFCYINDIVLAILELLKVHARVLYIDIDVHHGDGVEEAFYCTDRVMTFSLHKYGDFFPGTGHIKDTGAKEGTGYSVNVPLTSGMTDDAYEKIFKPVMDKIMEVFRPGAIVLQCGADSLTGDRLGCFNLSLKGHAECVRYTKSFGVPTLVLGGGGYTIRNVARCWAYETSVLLDTKLPDEIPYNDYYEYYAPDFKLHLTPEQRENLNTEASMESVRIDLLTQLSGLRGAPSVGMGEVPPDFET 389          
BLAST of NO03G03870 vs. NCBI_GenBank
Match: CBN75810.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 592.4 bits (1526), Expect = 1.100e-165
Identity = 270/385 (70.13%), Postives = 323/385 (83.90%), Query Frame = 0
Query:    1 MSSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELLKFHSEEYVNFLSRINPDMGRNLSTNLH---KFNVGEFTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKVTDIAVNWSGGLHHAKKSEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHKYGDFFPGTGNIKDTGSKAGKNYSVNVPLEDGIDDASYEMVFKPVMEKVMEVYQPTAVVLQCGADSLTGDRLGCFNLTLKGHAKCVEMMKSYNVPLLILGGGGYAIRNVARCWAYETAVLLEEEVSDDIPKNDYLDYYAPDYKLHLPPGT-KENQNSLEGLEEIKLQILQQLGQIQGAPSVQLQE 382
            MS K+RVSYFY GD+GHYYYGPGHPMKPHRLKL HHL+L Y LYR+M+VYRPH+A++ EL++FH  +YVNFL ++ P   R   T      KF+VGEFTDCP+F+G+  FC+ YTG SIDGA KLNH + DI +NWSGGLHHAKK+EASGFCY+NDIVLAILELLKYH RVLYIDIDIHHGDGVEEAFY TDRVMT+SFHKYGDFFPGTG+IKD G+K+GK YSVN PL++GIDD S+E +FKPV+ KVME+YQP+AVVLQCGADSLTGDRLGCFNLTLKGHA+ V+ +KS+ VP+L+LGGGGY IRNVARCWAYET VLL +E+ + IP NDY +YYAPD+KLHL P    EN N+ + L+ +K  +L+QL  +QGAPS+Q+ E
Sbjct:    1 MSEKRRVSYFYQGDIGHYYYGPGHPMKPHRLKLAHHLLLSYNLYREMDVYRPHLASSTELMRFHQADYVNFLEKVMPGPARGQGTGPQQQTKFSVGEFTDCPVFEGLYRFCQSYTGASIDGAIKLNHDMADICINWSGGLHHAKKAEASGFCYVNDIVLAILELLKYHSRVLYIDIDIHHGDGVEEAFYTTDRVMTLSFHKYGDFFPGTGDIKDVGAKSGKYYSVNFPLQEGIDDNSFESIFKPVVNKVMEMYQPSAVVLQCGADSLTGDRLGCFNLTLKGHAEAVKHVKSFGVPMLVLGGGGYTIRNVARCWAYETGVLLGKEIDEAIPYNDYFEYYAPDFKLHLTPSPHMENLNTPQELDRLKTTVLRQLQTLQGAPSMQMVE 385          
BLAST of NO03G03870 vs. NCBI_GenBank
Match: XP_002287594.1 (histone deactylase 1 HDAC Hda1p HDA1, partial [Thalassiosira pseudonana CCMP1335] >EED95037.1 histone deactylase 1 HDAC Hda1p HDA1, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 592.4 bits (1526), Expect = 1.100e-165
Identity = 262/385 (68.05%), Postives = 322/385 (83.64%), Query Frame = 0
Query:    2 SSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELLKFHSEEYVNFLSRINPDMGRNLSTNLHKFNVGEFTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKVTDIAVNWSGGLHHAKKSEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHKYGDFFPGTGNIKDTGSKAGKNYSVNVPLEDGIDDASYEMVFKPVMEKVMEVYQPTAVVLQCGADSLTGDRLGCFNLTLKGHAKCVEMMKSYNVPLLILGGGGYAIRNVARCWAYETAVLLEEEVSDDIPKNDYLDYYAPDYKLHLPPGTKENQNSLEGLEEIKLQILQQLGQIQGAPSVQLQEVPPDW 387
            ++K+RVSYFY  DVGH+YYGP HPMKPHR+K+ HHL+L YG+YR+ME Y+ H A+  E+  FHSE+Y+NF++++ PD  R  S  +++FNVGE+TDCP+FDG+ EF ++YTG S+DGA KLN    DIAVNWSGGLHHAKKSEASGFCYINDIVLAILE+LK H RVLYIDID+HHGDGVEEAFYCTDRVMT S HKYGDFFPGTG+IKDTG+K G  +SVN PL  G+ D +YE +FKPV+ K+MEV+QP A+VLQCGADSLTGDRLGCFNL+LKGHA+CV+  KS+NVP L+LGGGGY IRNVARCWAYET+VLL+ E+ D+IP NDY +YYAPD+KLHL P  +EN N+   LE +++ +L QL  ++GAPSVQ+ EVPPD+
Sbjct:   14 ANKQRVSYFYQPDVGHFYYGPSHPMKPHRIKMAHHLILSYGMYRQMECYKSHPASPSEMAAFHSEDYINFMAKVTPDNLRGFSNAMNRFNVGEYTDCPVFDGLFEFTQLYTGASLDGAVKLNRGDCDIAVNWSGGLHHAKKSEASGFCYINDIVLAILEMLKVHARVLYIDIDVHHGDGVEEAFYCTDRVMTFSLHKYGDFFPGTGHIKDTGAKEGTGFSVNAPLTSGMTDGTYEKLFKPVLSKIMEVFQPGAIVLQCGADSLTGDRLGCFNLSLKGHAECVKFTKSFNVPTLVLGGGGYTIRNVARCWAYETSVLLDMELPDEIPYNDYYEYYAPDFKLHLTPEQRENMNTEASLESVRVDLLTQLISLKGAPSVQMMEVPPDF 398          
BLAST of NO03G03870 vs. NCBI_GenBank
Match: CEO98953.1 (hypothetical protein PBRA_007067 [Plasmodiophora brassicae])

HSP 1 Score: 582.8 bits (1501), Expect = 8.600e-163
Identity = 263/392 (67.09%), Postives = 326/392 (83.16%), Query Frame = 0
Query:    6 RVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELLKFHSEEYVNFLSRINPDMGRNLSTNLHKFNVGEFTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKVTDIAVNWSGGLHHAKKSEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHKYGDFFPGTGNIKDTGSKAGKNYSVNVPLEDGIDDASYEMVFKPVMEKVMEVYQPTAVVLQCGADSLTGDRLGCFNLTLKGHAKCVEMMKSYNVPLLILGGGGYAIRNVARCWAYETAVLLEEEVSDDIPKNDYLDYYAPDYKLHLPPGTKENQNSLEGLEEIKLQILQQLGQIQGAPSVQLQEVPPDWATGGGKGGEKE 398
            RV YFY GD G YYYG GHPMKPHRL++TH L+L YGLY+KM+VY PH+AT+ E+ +FHS +Y++FL R++PD  ++L   L ++N+GEFTDCP+FDGM +FC  YTG SIDGA KLN+   DIAVNW+GGLHHAKKSEASGFCY+NDIVL ILELLKYH RVLYIDIDIHHGDGVEEAFY TDRVMTVSFHK+G+FFPGTG++KDTG++ GKNY++N PLE GIDD SY +VFKP++ +VMEVY+P A+VLQCGADSLTGDRLGCFNLT++GH + V  +KS+NVP L+LGGGGY IRNV+RCWAYET+VLL+ E+S+ IP ND+  YY+PD++LH+ P +  NQNS + LE+IK +ILQ L  I+ APSVQ+Q+VP D+ T     G+ E
Sbjct:    4 RVCYFYDGDYGSYYYGAGHPMKPHRLRMTHSLLLSYGLYKKMDVYTPHVATSVEMSEFHSADYIDFLRRVSPDNYKSLMRQLEQYNLGEFTDCPVFDGMYDFCATYTGASIDGAVKLNNGEVDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHARVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKFGNFFPGTGDVKDTGARLGKNYAINFPLESGIDDDSYLLVFKPIISRVMEVYRPGAIVLQCGADSLTGDRLGCFNLTVRGHGEAVRFVKSFNVPTLVLGGGGYNIRNVSRCWAYETSVLLDTEISNSIPYNDFFHYYSPDFQLHVQPSSATNQNSRKYLEDIKNKILQNLASIEHAPSVQMQQVPNDFFTTDMINGDAE 395          
BLAST of NO03G03870 vs. NCBI_GenBank
Match: CCA14006.1 (histone deacetylase putative [Albugo laibachii Nc14])

HSP 1 Score: 582.4 bits (1500), Expect = 1.100e-162
Identity = 263/389 (67.61%), Postives = 316/389 (81.23%), Query Frame = 0
Query:    1 MSSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELLKFHSEEYVNFLSRINPDMGRNLSTNLHKFNVGEFTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKVTDIAVNWSGGLHHAKKSEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHKYGDFFPGTGNIKDTGSKAGKNYSVNVPLEDGIDDASYEMVFKPVMEKVMEVYQPTAVVLQCGADSLTGDRLGCFNLTLKGHAKCVEMMKSYNVPLLILGGGGYAIRNVARCWAYETAVLLEEEVSDDIPKNDYLDYYAPDYKLHLPPGTK-ENQNSLEGLEEIKLQILQQLGQIQGAPSVQLQEVPPDWAT 389
            M  K RV+YFYH D GH+YYGPGHPMKPHR+KLTHHLV+ Y LYRKM+V+ PH A+ +E+  FHS EY++FL R+ P   +  S  L KFN G+FTDCP+FDG+ +FC+IY+G ++D A +LNH + DIA+NW+GGLHHAKKSE SGFCY+NDIVL ILELL+YHPRVLYIDID+HHGDGVEEAFY TDRVMTVSFHKYGDFFPGTG+IKD G+K GK Y+VN PL  G+ D SY  +FKPV+ KVME +QP+AVVLQCGADSLTGDRLGCFN+T KGH +CVE +KSY  PLL+LGGGGY IRNVAR WAYETAVLL EEVS++IP NDY +YYAP +KLHL P  + EN NS E +E+IK++I + L  + GAPSVQ+ + PP   T
Sbjct:   52 MGGKTRVAYFYHPDEGHFYYGPGHPMKPHRMKLTHHLVVNYDLYRKMDVFEPHWASPEEIKAFHSPEYIDFLQRVTPTNQKEFSQELQKFNCGDFTDCPVFDGVFDFCRIYSGGTLDAAHRLNHGLCDIAINWAGGLHHAKKSEGSGFCYVNDIVLGILELLRYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDLGAKNGKYYAVNFPLLSGMTDESYTNIFKPVIAKVMETFQPSAVVLQCGADSLTGDRLGCFNVTTKGHGECVEFVKSYGFPLLVLGGGGYTIRNVARAWAYETAVLLGEEVSNNIPYNDYFEYYAPSFKLHLDPDPELENANSKEYMEDIKIKIFENLRALDGAPSVQMAQAPPSILT 440          
BLAST of NO03G03870 vs. NCBI_GenBank
Match: XP_009827426.1 (hypothetical protein H257_04553 [Aphanomyces astaci] >ETV82755.1 hypothetical protein H257_04553 [Aphanomyces astaci])

HSP 1 Score: 581.6 bits (1498), Expect = 1.900e-162
Identity = 259/384 (67.45%), Postives = 324/384 (84.38%), Query Frame = 0
Query:    4 KKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELLKFHSEEYVNFLSRINPDMGRNLSTNLHKFNVGEFTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKVTDIAVNWSGGLHHAKKSEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHKYGDFFPGTGNIKDTGSKAGKNYSVNVPLEDGIDDASYEMVFKPVMEKVMEVYQPTAVVLQCGADSLTGDRLGCFNLTLKGHAKCVEMMKSYNVPLLILGGGGYAIRNVARCWAYETAVLLEEEVSDDIPKNDYLDYYAPDYKLHLPPGTK-ENQNSLEGLEEIKLQILQQLGQIQGAPSVQLQEVPPDW 387
            K RVSYFYH + G++YYGPGHPMKPHRLKL HHLVL Y L+RKMEV+ PH A+++E+  FH+ EYV FL +I+P   +   ++++KFNVGEFTDCP+FDG+  FC+IY+G S+D A +LNH +TD+A+NW+GGLHHAKKSEASGFCYINDIVL ILELLKYHPRVLYIDID+HHGDGVEEAFY TDRVMTVSFHKYGDFFPGTG+IKD G+KAGK Y+VN PL+ GIDD +Y  +FKPV+EKV+E ++P A+VLQCGADSLTGDRLGCFNLT++GH +CV+ +KS+ +P ++LGGGGY IRNV+RCWAYETAV L+E+VS+DIP N+Y +YYAP +KLHL P +  EN NS   LE++K++I + L  + GAPSVQ+  +PPD+
Sbjct:    3 KSRVSYFYHPEEGNFYYGPGHPMKPHRLKLAHHLVLNYDLFRKMEVFEPHWASSEEVKAFHTPEYVEFLKKISPSNEKQYQSDVNKFNVGEFTDCPVFDGIFNFCQIYSGGSLDAAYRLNHGLTDVAINWAGGLHHAKKSEASGFCYINDIVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDVGAKAGKYYAVNCPLKSGIDDENYLTIFKPVVEKVIETFRPGAIVLQCGADSLTGDRLGCFNLTVQGHGECVKYVKSFGLPTMVLGGGGYTIRNVSRCWAYETAVCLDEQVSNDIPFNEYFEYYAPTFKLHLDPNSDLENCNSRAYLEDVKIKIFEHLRMLNGAPSVQMTTMPPDY 386          
BLAST of NO03G03870 vs. NCBI_GenBank
Match: CCI40020.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 581.6 bits (1498), Expect = 1.900e-162
Identity = 262/389 (67.35%), Postives = 318/389 (81.75%), Query Frame = 0
Query:    1 MSSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELLKFHSEEYVNFLSRINPDMGRNLSTNLHKFNVGEFTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKVTDIAVNWSGGLHHAKKSEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHKYGDFFPGTGNIKDTGSKAGKNYSVNVPLEDGIDDASYEMVFKPVMEKVMEVYQPTAVVLQCGADSLTGDRLGCFNLTLKGHAKCVEMMKSYNVPLLILGGGGYAIRNVARCWAYETAVLLEEEVSDDIPKNDYLDYYAPDYKLHLPPGTK-ENQNSLEGLEEIKLQILQQLGQIQGAPSVQLQEVPPDWAT 389
            M  K RV+YFYH D GH+YYGPGHPMKPHR+KLTHHLV+ Y LYRKM+V+ PH A+ +E+  FHS EY++FL R+ P   +  +  L KFN GEFTDCPIFDG+ +FC+IY+G ++D A +LNH + DIA+NW+GGLHHAKKSE SGFCY+NDIVL ILELL+YHPRVLYIDID+HHGDGVEEAFY TDRVMTVSFHKYGDFFPGTG+IKD G+K GK Y+VN PL  G+ D SY+ +FKPV+ KVME +QP+AVVLQCGADSLTGDRLGCFN+T KGH +CV+ +KSY +PLL+LGGGGY IRNVAR WAYETAVLL EEVS++IP NDY +YYAP +KLHL P  + EN NS + +E+IK++I + L  + GAPSVQ+ + PP   T
Sbjct:    1 MGGKTRVAYFYHPDEGHFYYGPGHPMKPHRMKLTHHLVVNYDLYRKMDVFEPHWASPEEIKAFHSPEYIDFLQRVTPTNQKEYAQELQKFNCGEFTDCPIFDGVFDFCRIYSGGTLDAAHRLNHGLCDIAINWAGGLHHAKKSEGSGFCYVNDIVLGILELLRYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDLGAKNGKYYAVNFPLLSGMTDESYKNIFKPVIAKVMETFQPSAVVLQCGADSLTGDRLGCFNVTTKGHGECVDFVKSYGLPLLVLGGGGYTIRNVARAWAYETAVLLGEEVSNNIPYNDYFEYYAPSFKLHLDPDPELENANSKDYMEDIKIRIFENLRALDGAPSVQMAQAPPSILT 389          
BLAST of NO03G03870 vs. NCBI_GenBank
Match: XP_008610886.1 (histone deacetylase 1/2 [Saprolegnia diclina VS20] >EQC35569.1 histone deacetylase 1/2 [Saprolegnia diclina VS20])

HSP 1 Score: 580.1 bits (1494), Expect = 5.600e-162
Identity = 261/384 (67.97%), Postives = 323/384 (84.11%), Query Frame = 0
Query:    4 KKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELLKFHSEEYVNFLSRINPDMGRNLSTNLHKFNVGEFTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKVTDIAVNWSGGLHHAKKSEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHKYGDFFPGTGNIKDTGSKAGKNYSVNVPLEDGIDDASYEMVFKPVMEKVMEVYQPTAVVLQCGADSLTGDRLGCFNLTLKGHAKCVEMMKSYNVPLLILGGGGYAIRNVARCWAYETAVLLEEEVSDDIPKNDYLDYYAPDYKLHLPPGTK-ENQNSLEGLEEIKLQILQQLGQIQGAPSVQLQEVPPDW 387
            K RVSYFYH + G++YYGPGHPMKPHRLKL HHLVL Y L+RKMEV+ PH A+ +E+  FH+ +Y++FL +I+P   +   ++++KFNVGEFTDCP+FDG+  FC+IY+G S+D A +LN  ++D+ +NW+GGLHHAKKSEASGFCY+NDIVL ILELLKYHPRVLYIDID+HHGDGVEEAFY TDRVMTVSFHKYGDFFPGTG+IKD G+KAGK Y+VNVPL+ GIDD SY  +FKPV+EKVME ++P AVVLQCGADSLTGDRLGCFNLT+KGH +CV  +KS+ +P L+LGGGGY IRNV+R WAYET+V+LEE+VS+DIP N+Y +YYAP +KLHL P  + EN NS   LE+IK++I + L  + GAPSVQ+Q VPPD+
Sbjct:    3 KSRVSYFYHPEEGNFYYGPGHPMKPHRLKLAHHLVLNYDLFRKMEVFEPHWASPEEVKAFHTADYIDFLKKISPANEKQYQSDVNKFNVGEFTDCPVFDGIFNFCQIYSGGSLDAAYRLNQGLSDVCINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDVGAKAGKYYAVNVPLKSGIDDESYLSIFKPVIEKVMESFRPGAVVLQCGADSLTGDRLGCFNLTVKGHGECVRFVKSFGLPTLVLGGGGYTIRNVSRAWAYETSVVLEEQVSNDIPFNEYFEYYAPSFKLHLDPNPELENCNSRTYLEDIKVKIFEHLRMLNGAPSVQMQAVPPDY 386          
BLAST of NO03G03870 vs. NCBI_GenBank
Match: XP_008869930.1 (hypothetical protein H310_06587 [Aphanomyces invadans] >ETW00932.1 hypothetical protein H310_06587 [Aphanomyces invadans])

HSP 1 Score: 580.1 bits (1494), Expect = 5.600e-162
Identity = 261/384 (67.97%), Postives = 322/384 (83.85%), Query Frame = 0
Query:    4 KKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELLKFHSEEYVNFLSRINPDMGRNLSTNLHKFNVGEFTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKVTDIAVNWSGGLHHAKKSEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHKYGDFFPGTGNIKDTGSKAGKNYSVNVPLEDGIDDASYEMVFKPVMEKVMEVYQPTAVVLQCGADSLTGDRLGCFNLTLKGHAKCVEMMKSYNVPLLILGGGGYAIRNVARCWAYETAVLLEEEVSDDIPKNDYLDYYAPDYKLHLPPGTK-ENQNSLEGLEEIKLQILQQLGQIQGAPSVQLQEVPPDW 387
            K RVSYFYH + G++YYGPGHPMKPHRLKL HHLVL Y L+RKMEV+ PH A+++E+  FH+ +YV FL +I+P   +   ++++KFNVGEFTDCP+FDG+  FC+IY+G S+D A +LNH +TD+A+NW+GGLHHAKKSEASGFCYINDIVL ILELLKYHPRVLYIDID+HHGDGVEEAFY TDRVMTVSFHKYGDFFPGTG+IKD G+KAGK YSVN PL+ GIDD +Y  +FKPV+EKV+E ++P A+VLQCGADSLTGDRLGCFNLT++GH +CV+ +KS+ +P ++LGGGGY IRNV+RCWAYETAV L+E VS+DIP N+Y +YYAP +KLHL P T  EN NS   LE+IK +I + L  + GAPSVQ+  +PPD+
Sbjct:    3 KSRVSYFYHPEEGNFYYGPGHPMKPHRLKLAHHLVLNYDLFRKMEVFEPHWASSEEVKAFHTADYVEFLKKISPSNEKQYQSDVNKFNVGEFTDCPVFDGIFNFCQIYSGGSLDAAYRLNHGLTDVAINWAGGLHHAKKSEASGFCYINDIVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDIGAKAGKYYSVNCPLKSGIDDDNYLTIFKPVIEKVIESFRPGAIVLQCGADSLTGDRLGCFNLTVQGHGECVKFVKSFGLPTMVLGGGGYTIRNVSRCWAYETAVCLDETVSNDIPFNEYFEYYAPSFKLHLDPNTDLENCNSRAYLEDIKAKIFEHLRMLNGAPSVQMSVMPPDF 386          
The following BLAST results are available for this feature:
BLAST of NO03G03870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29801.11.800e-21689.45histone deacetylase 1 [Nannochloropsis gaditana][more]
EJK57351.15.800e-16769.43hypothetical protein THAOC_22614 [Thalassiosira oc... [more]
CBN75810.11.100e-16570.13conserved unknown protein [Ectocarpus siliculosus][more]
XP_002287594.11.100e-16568.05histone deactylase 1 HDAC Hda1p HDA1, partial [Tha... [more]
CEO98953.18.600e-16367.09hypothetical protein PBRA_007067 [Plasmodiophora b... [more]
CCA14006.11.100e-16267.61histone deacetylase putative [Albugo laibachii Nc1... [more]
XP_009827426.11.900e-16267.45hypothetical protein H257_04553 [Aphanomyces astac... [more]
CCI40020.11.900e-16267.35unnamed protein product [Albugo candida][more]
XP_008610886.15.600e-16267.97histone deacetylase 1/2 [Saprolegnia diclina VS20]... [more]
XP_008869930.15.600e-16267.97hypothetical protein H310_06587 [Aphanomyces invad... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005510NSK005510Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G03870.1NO03G03870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|624497gene_1584Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100017g40gene813Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G03870.1NO03G03870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G03870 ID=NO03G03870|Name=NO03G03870|organism=Nannochloropsis oceanica|type=gene|length=1692bp
ACAGTGTACGAGATGTCGTCTAAAAAACGCGTGTCGTACTTCTACCACGG
CGACGTGGGCCACTACTACTACGGCCCTGGCCACCCAATGAAGgtatgtt
gtgatggtcgcgccagttcgcatgaaggaaaaggtgtggttgatgtgtcg
cgtgcgcttctttggtctactgtttgtcttatgtgccatcttgtagttcc
atcgcttattgcgatcgtgtaccgttgtaacgctgaccccatacttctct
ccccttacctatccctgtctccggcctttacttttattcctccaataaag
CCCCACCGCCTTAAGCTTACCCATCACCTCGTCCTCGGCTATGGGCTCTA
CCGTAAAATGGAGGTCTACCGCCCGCATATCGCCACCACGCAAGAACTTC
TGAAATTCCATTCTGAAGAGTACGTAAATTTTCTTTCACGTATTAACCCT
GATATGGGTCGAAATCTGAGCACAAATTTGCATAAGTTCAATGTGGGGGA
GTTCACGGATTGTCCGATCTTCGACGGGATGATGGAGTTCTGTAAGATCT
ATACCGGCTGCTCAATCGATGGGGCGCAGAAGCTGAACCATAAGGTGACG
GATATCGCGGTAAATTGGTCTGGGGGGCTGCACCACGCAAAGAAGAGCGA
GGCCAGCGGGTTTTGTTACATCAATgtacgtgccctccctttatctgttt
ctccctcccttctccttcctctttccctcccttcctcgtctttcccatct
ttttcttcacccttccatccctttattccccgcctgtcgttgtacgcatg
gcgattggagaagcagcctctggctcaaccgcctgcccaccgcccctttc
tccctcccttcctcttttcctcccatcagGACATTGTCTTGGCCATCCTA
GAGCTACTGAAGTACCACCCCCGCGTCCTGTACATCGATATTGACATCCA
TCACGGCGACGGCGTGGAGGAGGCGTTCTACTGCACCGATCGCGTCATGA
CAGTGTCTTTCCATAAATACGGCGATTTCTTCCCTGGTACGGGAAACATC
AAGGACACGGGAAGCAAGGCCGGGAAGAATTATTCCGTCAATGTGCCCCT
TGAGGACGGGATCGACGACGCCAGCTACGAGATGGTATTCAAGCCGGTGA
TGGAGAAAGTGATGGAGGTCTATCAACCCACGGCGGTGGTGCTGCAATGC
GGCGCCGATTCCTTGACAGGGGACAGGCTCGGTTGCTTTAATTTAACCCT
CAAGGGGCATGCCAAATGTGTCGAAATGATGAAGAGCTACAACGTTCCCT
TGTTGATTCTGGGGGGGGGGGGGTACGCCATTCGGAACGTGGCGCGGTGC
TGGGCGTATGAAACCGCAGTGTTGTTGGAGGAGGAGGTGAGTGACGATAT
CCCCAAAAACGACTACCTCGATTACTACGCCCCAGATTACAAGTTGCACT
TGCCGCCGGGCACCAAGGAGAACCAGAACTCGTTGGAAGGGTTGGAAGAG
ATTAAACTCCAGATTTTGCAGCAATTGGGGCAAATCCAAGGCGCGCCGTC
TGTGCAGCTGCAGGAGGTACCTCCTGATTGGGCCACGGGGGGGGGGAAGG
GGGGGGAGAAAGAGAGCGGGGGAGAGGGAGGAGAGAGGAAGGGGAGAGGA
GGACCGGGAGACGATGGACGAGCGGTCGGTTGGCAAGAATAA
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protein sequence of NO03G03870.1

>NO03G03870.1-protein ID=NO03G03870.1-protein|Name=NO03G03870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=423bp
MSSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVY
RPHIATTQELLKFHSEEYVNFLSRINPDMGRNLSTNLHKFNVGEFTDCPI
FDGMMEFCKIYTGCSIDGAQKLNHKVTDIAVNWSGGLHHAKKSEASGFCY
INDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHKYG
DFFPGTGNIKDTGSKAGKNYSVNVPLEDGIDDASYEMVFKPVMEKVMEVY
QPTAVVLQCGADSLTGDRLGCFNLTLKGHAKCVEMMKSYNVPLLILGGGG
YAIRNVARCWAYETAVLLEEEVSDDIPKNDYLDYYAPDYKLHLPPGTKEN
QNSLEGLEEIKLQILQQLGQIQGAPSVQLQEVPPDWATGGGKGGEKESGG
EGGERKGRGGPGDDGRAVGWQE*
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Synonyms
Publications