NO03G03700, NO03G03700 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G03700 vs. NCBI_GenBank
Match: EWM29820.1 (had family hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 391.3 bits (1004), Expect = 2.500e-105 Identity = 192/280 (68.57%), Postives = 225/280 (80.36%), Query Frame = 0 Query: 7 LKFRVFVVSLVLWSYSAVAFTTKVSLKSPLSCSARIFQLHQRRTHSSSTPTMAAAPPKVKGICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEILEA 287 L V V++L +A F +++S+++ S S + + P +KGICFDMDGTLTNSD+LHFETYRDTLLK APEYN G+PLERAFYD KLSGSANEIIVP LLPHW + RMEELWLAKEALYR+RS +ISPLPGV+R+LDWC K+ YVLVTNAPRV+C+HTLHSLKL +RF +SKI+IG+E+ARPKPFPDAYNEGLRRLGLAA ECIAFEDSFSGLASAVAAGIPTVAVLTSR+E EM D+GAFM++KDF+ PSLW +LEA Sbjct: 25 LALTVVVLTLRSSCVAAFCFPSRLSVRTSKS-----------YIRSRQNSVVMSISPHIKGICFDMDGTLTNSDDLHFETYRDTLLKFAPEYNDGRPLERAFYDQKLSGSANEIIVPMLLPHWPQDRMEELWLAKEALYRERSANISPLPGVIRLLDWCTENKIGYVLVTNAPRVECLHTLHSLKLKDRFHDSKIIIGQEMARPKPFPDAYNEGLRRLGLAAKECIAFEDSFSGLASAVAAGIPTVAVLTSRSEAEMIDRGAFMSVKDFDEPSLWALLEA 293
BLAST of NO03G03700 vs. NCBI_GenBank
Match: CBN74499.1 (haloacid dehalogenase-like hydrolase family protein [Ectocarpus siliculosus]) HSP 1 Score: 186.8 bits (473), Expect = 9.400e-44 Identity = 92/183 (50.27%), Postives = 124/183 (67.76%), Query Frame = 0 Query: 72 MDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAV 255 MDGTLT+SD LHFE YR+T LK+ P +N G+ + R +YD +SG++N IV L P LW AKE +YRK S ++ LPG+L LD C ++ + +LVTNAPR+D +HTL+ L L++RF+ + +VIG E R KP PD Y EGL RL L A C+AFEDS +G++SAV+AG+ T V Sbjct: 1 MDGTLTDSDTLHFEAYRETFLKLTPSFNGGERISREYYDDWMSGNSNPAIVEKLFPEMLAEDQTALWKAKEEVYRKISTTMTLLPGLLEFLDGCQSEGLAMILVTNAPRLDAVHTLNILGLSDRFEET-MVIGYECPRAKPHPDPYLEGLSRLDLPADACVAFEDSVNGVSSAVSAGLYTFGV 182
BLAST of NO03G03700 vs. NCBI_GenBank
Match: WP_038413912.1 (haloacid dehalogenase [Pseudomonas cremoricolorata] >AIR91180.1 haloacid dehalogenase [Pseudomonas cremoricolorata]) HSP 1 Score: 169.1 bits (427), Expect = 2.000e-38 Identity = 88/219 (40.18%), Postives = 137/219 (62.56%), Query Frame = 0 Query: 66 KGICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEIL 285 + + FD+DGTLT++D LH + +R+ L + G+ L +A +DAK+SG AN + L P A + L KEAL+R+RS + P+PG+LR+L+ + + +VTNAPR++ H L ++ L + F++ +++ EE+AR KP P Y GL+RL A E +AFEDS G+A+AVAAGI TVA+ T++ ++ + GA + I+DF LW +L Sbjct: 3 RALLFDLDGTLTDTDTLHLQAFRELL-----HEHDGRHLSQAEFDAKVSGRANAALFADLFPALSAAERQTLAERKEALFRERSPQLQPMPGLLRVLEHARTRHMGLCVVTNAPRLNAEHMLGAMGLGDAFEH--VLVAEELARAKPDPLPYLSGLQRLDAKAAEALAFEDSLPGVAAAVAAGIYTVALSTTQPAQKLREAGAQLVIEDFNDERLWALL 214
BLAST of NO03G03700 vs. NCBI_GenBank
Match: WP_106172042.1 (hydrolase [filamentous cyanobacterium CCP2] >PSB18160.1 hydrolase [filamentous cyanobacterium CCP2]) HSP 1 Score: 167.9 bits (424), Expect = 4.500e-38 Identity = 88/221 (39.82%), Postives = 129/221 (58.37%), Query Frame = 0 Query: 65 VKGICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVD-ISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEIL 285 +K + FD+DGTL N+D +HF+T+RD ++ E+++ FY A SG N+ I+ LLP EL KEA +R R+ ++P PG+ +LDW DAQK+ +VTNAP + L L+LNE F + +++G+E+ KP P Y L +LG+ A E I FEDS SG+ SA+ AGI TV V ++ + ++ G + I DF P LWE+L Sbjct: 2 LKALLFDLDGTLANTDPIHFQTWRDLMMPYGLEFDT------EFYQANFSGRRNQEIIADLLPQLSEQAGNELSQRKEAEFRDRAETLLTPTPGLFDVLDWTDAQKLQRAVVTNAPIENAEFMLRVLRLNETF--ATVILGDELPAGKPDPLPYRMALEQLGINADEAIGFEDSASGIQSAIGAGIMTVGVASTHSHEDLYQLGCILVIDDFSDPRLWELL 214
BLAST of NO03G03700 vs. NCBI_GenBank
Match: PSB66893.1 (hydrolase [filamentous cyanobacterium CCP1]) HSP 1 Score: 167.9 bits (424), Expect = 4.500e-38 Identity = 88/221 (39.82%), Postives = 129/221 (58.37%), Query Frame = 0 Query: 65 VKGICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVD-ISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEIL 285 +K + FD+DGTL N+D +HF+T+RD ++ E+++ FY A SG N+ I+ LLP EL KEA +R R+ ++P PG+ +LDW DAQK+ +VTNAP + L L+LNE F + +++G+E+ KP P Y L +LG+ A E I FEDS SG+ SA+ AGI TV V ++ + ++ G + I DF P LWE+L Sbjct: 2 LKALLFDLDGTLANTDPIHFQTWRDLMMPYGLEFDT------EFYQANFSGRRNQEIIADLLPQLSEQAGNELSQRKEAEFRDRAETLLTPTPGLFDVLDWTDAQKLQRAVVTNAPIENAEFMLRVLRLNETF--ATVILGDELPAGKPDPLPYRMALEQLGINADEAIGFEDSASGIQSAIGAGIMTVGVASTHSHEDLYQLGCILVIDDFSDPRLWELL 214
BLAST of NO03G03700 vs. NCBI_GenBank
Match: WP_028694095.1 (haloacid dehalogenase [Pseudomonas cremoricolorata]) HSP 1 Score: 166.8 bits (421), Expect = 1.000e-37 Identity = 86/217 (39.63%), Postives = 135/217 (62.21%), Query Frame = 0 Query: 68 ICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEIL 285 + FD+DGTLT++D LH + +R+ L + G+ L +A +DAK+SG AN + L P + + L KEAL+R+R+ + P+PG+LR+L+ +Q + +VTNAPR++ H L ++ L + F++ +++ EE+AR KP P Y GL+RLG A + +AFEDS G+A+A AAGI TVA+ T++ + + GA + I DF LW +L Sbjct: 5 LLFDLDGTLTDTDTLHLQAFRELL-----HEHDGRQLSQAEFDAKVSGRANTELFADLFPALSAGQRQALAERKEALFRERTPQLQPMPGLLRVLEHARSQHMGLCVVTNAPRLNAEHMLSAMGLGDAFEH--VLVAEELARAKPDPLPYLTGLQRLGAQAEQALAFEDSLPGVAAASAAGIYTVALATTQTPQRLREAGAQLVIDDFTDERLWALL 214
BLAST of NO03G03700 vs. NCBI_GenBank
Match: XP_009376841.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Pyrus x bretschneideri] >XP_009350290.1 PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Pyrus x bretschneideri]) HSP 1 Score: 166.4 bits (420), Expect = 1.300e-37 Identity = 88/236 (37.29%), Postives = 131/236 (55.51%), Query Frame = 0 Query: 51 HSSSTPTMAAAPPKVKGICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKR-SVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEILE 286 H+ + A ++ I FD+DGTL +SD H+ +R+ L ++ +N G P+ F+ K++G NE + L P W+ R + + KEA++R+ S I PL G+ R+ W + Q + VTNAP+++ L LKL + F+ +V+GEE R KPFPD Y L +L L+ FEDS SG+ + VAAG+P V + T E + + GA IKDF+ P LWE LE Sbjct: 46 HALDRKSSLACVAPLEAILFDIDGTLCDSDPFHYYAFREMLQEVG--FNGGVPITEEFFSEKITGGHNEYLCNILFPDWDIERARQFLVDKEAMFRRLISEKIEPLKGLPRLRQWIEKQGLRRAAVTNAPKLNAELILSKLKLTDFFE--IVVLGEECVRAKPFPDPYLTALEKLNLSNEHAFIFEDSVSGVKAGVAAGMPVVGLGTRNPEEALINAGASFVIKDFDDPKLWEALE 277
BLAST of NO03G03700 vs. NCBI_GenBank
Match: WP_009682716.1 (MULTISPECIES: haloacid dehalogenase [Pseudomonas] >EGB99443.1 haloacid dehalogenase [Pseudomonas sp. TJI-51]) HSP 1 Score: 165.6 bits (418), Expect = 2.200e-37 Identity = 88/218 (40.37%), Postives = 134/218 (61.47%), Query Frame = 0 Query: 68 ICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEILE 286 + FD+DGTLT++D+LH + +R L + G+ L +A ++A++SG AN + L P + L KEAL+R+ S + P+PG+LR+L+ A + +VTNAPR++ H L ++ L +RF++ +V+ +E+ARPKP P Y GL+RLG AA + +AFEDS G+A+A AAGI TV V T++ + GA + I DF LW +LE Sbjct: 5 LLFDLDGTLTDTDSLHLQAFRQLL-----RDHDGRELSQAQFEAQVSGRANGELFAELFPGASTEQCARLADRKEALFREMSPALQPMPGLLRLLEHAQAHAIGMCVVTNAPRLNAEHMLAAMGLAQRFEH--VVVADELARPKPDPLPYLTGLQRLGAAAGQALAFEDSLPGVAAATAAGIFTVGVATTQTPERLRAAGAQLVIADFNDAQLWALLE 215
BLAST of NO03G03700 vs. NCBI_GenBank
Match: WP_060476542.1 (haloacid dehalogenase [Pseudomonas monteilii]) HSP 1 Score: 165.6 bits (418), Expect = 2.200e-37 Identity = 87/218 (39.91%), Postives = 133/218 (61.01%), Query Frame = 0 Query: 68 ICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEILE 286 + FD+DGTLT++D LH + +R L G+ L + +DA++SG AN + L P + + L KEAL+R+ S ++ PLPG+LR++D A + +VTNAPR++ H L+++ L RF++ +++ EE+ARPKP P Y GL RL A E +AFEDS G+A+A AGI TV V T++ + GA + +KDF+ P+LW ++E Sbjct: 5 LLFDLDGTLTDTDTLHLQAFRQLL-----NAYDGRELTQEQFDAQVSGRANGALFAELFPLASTSERQALAERKEALFRELSTELHPLPGLLRLMDHARAWDIGMCVVTNAPRLNAEHMLNAMGLAARFEH--VLVAEELARPKPDPLPYLTGLLRLEALASEALAFEDSLPGVAAASGAGIFTVGVATTQTPERLLAAGAKLVVKDFDDPALWALIE 215
BLAST of NO03G03700 vs. NCBI_GenBank
Match: WP_068508872.1 (hydrolase [Leptolyngbya sp. O-77] >BAU41443.1 Phosphorylated carbohydrates phosphatase [Leptolyngbya sp. O-77]) HSP 1 Score: 165.6 bits (418), Expect = 2.200e-37 Identity = 86/224 (38.39%), Postives = 130/224 (58.04%), Query Frame = 0 Query: 65 VKGICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEILEAGR 289 +K + FD+DGT+ N+D LH++T++ + ++ G ++R FYDA SG NE IV LLPH +L KEA +R+++ + P PG+ +L W ++ +VTNAP + + +L L F +V+G+E+ + KP P Y L RLG++A E IAFEDS SG+ SAV AGIPTV V + + E++ G + I+DF P LW L++ R Sbjct: 2 LKALLFDLDGTVANTDPLHYQTWKAVMAEL------GMEIDRKFYDANFSGRLNEQIVRDLLPHLSAEEGAKLSAEKEARFRQQATSLEPTPGLWDVLHWMQHHELRRAVVTNAPVENAEFLMQTLALKPLF--PVVVLGDELPKGKPDPLPYQTALERLGVSATEAIAFEDSPSGICSAVGAGIPTVGVAATHSAEELSQLGTRLVIQDFTDPRLWSWLKSAR 217 The following BLAST results are available for this feature:
BLAST of NO03G03700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G03700 ID=NO03G03700|Name=NO03G03700|organism=Nannochloropsis oceanica|type=gene|length=965bpback to top protein sequence of NO03G03700.1 >NO03G03700.1-protein ID=NO03G03700.1-protein|Name=NO03G03700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=289bpback to top Synonyms
Publications
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