NO03G03550, NO03G03550 (gene) Nannochloropsis oceanica

Overview
NameNO03G03550
Unique NameNO03G03550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2595
Alignment locationchr3:1059754..1062348 -

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Properties
Property NameValue
DescriptionMajor facilitator superfamily domain, general substrate transporter
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1059754..1062348 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Homology
BLAST of NO03G03550 vs. NCBI_GenBank
Match: EWM29849.1 (Major facilitator superfamily domain, general substrate transporter [Nannochloropsis gaditana])

HSP 1 Score: 649.8 bits (1675), Expect = 1.100e-182
Identity = 353/562 (62.81%), Postives = 420/562 (74.73%), Query Frame = 0
Query:  211 VSSMTVVIAAWGTSLTHAVNERASLYTIDAIMDLFGFCAGVLITAVGTPAKTGVALAFIFLFQNLLLVSFLRDEQVT--TGATAGGAARRHHVAETAIQVPFIAGLHMSFENKEFLTLFKAALFGSIVGTTVNLLPIFFQVVMRIGDDAIESVYSIYAQLVIISAFFAVLSTATLNARWGKIRTLQFGVGCGAVYGLIAFCASYASVVELFYLSSVPAGMFAGIVAVNGNVLLSNSIDYDQLKTGFRRQSLYQCLIYVPMTFVSVAGSSIPLSIITAFGGLEAGQTPPSAVVLTLRLWVSLVVTGCLLASYRQLSAFKLTEAVQQDVSAQLRRREQGQFLPPRDPIQEEEDESGENTLGVEGEIELSQDVKAGENSSSGGVNGISXXXXXXXXXXXXXXXXPPSASVNGPWYPMVAFLELNFSSQELALLTLDNGKQWKLGTYLLNLLACAFYAVILFVQTVVAVDQRDDLTGAMIFVCFLMLASSVAIYEGGRFHAMKEVYYMGDGRDVARWARQRLTARKNVRPWVLYNPFRLVLRTVIAHVGFSIVLLSVVFSLHLPLK 771
            +S+MTVVIAAWGTSLTHAV+ERASLYTIDA+ DL GF  GV ITA GTPA TG+ALA IF+FQNLLLV  LRD+ +T  TG TA   +     + T +QVPFIAGLHMSF+NK+F+ LFKAA+FGSIVGTTVNLLPIFFQVVM + D +++ VY IY Q V+ SAF AVL+   LNARWGKI  L+FGV CG++YGL+AF ASYA  VE FYL+SVPAG+F G V VNGNVLLSNSIDYDQLKTGFRRQSLYQCL+YVP+TFVSVAGSSIPLSIITAFGGLEAG  PP+AV+ TLRLW+SL+VTGCL+ S   LS FKLTEAVQ+D+SAQL+ REQG  LPPRDP+QE E    E  +   G +       A + S   GV+                     S +  G W+   +FL+LNFSS ELALL    GKQWKL TYLLN++A A YA++L V+T+ A+DQR DLTGA +F  F MLASS+ IYEGGR HAMKE+Y MGD + VARWAR+RL+ARK++R  VL NPFRLV R ++AH   SI L+ V+ SL  P++
Sbjct:    1 MSAMTVVIAAWGTSLTHAVHERASLYTIDALADLLGFLVGVAITAAGTPATTGLALAVIFIFQNLLLVRVLRDDPITPSTGTTATEGS-----SSTLVQVPFIAGLHMSFDNKQFVALFKAAVFGSIVGTTVNLLPIFFQVVMNVPDSSLKRVYGIYVQAVVASAFVAVLAVGRLNARWGKICVLRFGVACGSLYGLLAFFASYARTVEWFYLTSVPAGLFVGTVTVNGNVLLSNSIDYDQLKTGFRRQSLYQCLMYVPLTFVSVAGSSIPLSIITAFGGLEAGHAPPAAVIQTLRLWISLIVTGCLIVSNNYLSNFKLTEAVQEDISAQLQLREQGNLLPPRDPLQENEPHKNE-AVERAGNLPCGTCKGATDVSEKRGVD-----PGEVCAAVDAELDMSSSMTAAGLWHCTNSFLDLNFSSSELALLATHKGKQWKLWTYLLNIIASAVYAIVLLVETIAAIDQRGDLTGAEVFASFFMLASSMVIYEGGRLHAMKEIYKMGDEQKVARWARRRLSARKSIRHSVLVNPFRLVRREIVAHTMMSITLIFVITSLPSPIR 551          
BLAST of NO03G03550 vs. NCBI_GenBank
Match: GBD25869.1 (putative symporter YjmB [bacterium HR30])

HSP 1 Score: 75.9 bits (185), Expect = 6.300e-10
Identity = 103/427 (24.12%), Postives = 177/427 (41.45%), Query Frame = 0
Query:   77 SPSKQLLSASLAPAMIQKLIYGLGASFGFNALVVSNGTLMDYYEKTYGLSTSFLSLADFLAGSLTLYAVVGFGYWSDITTSSYGRRKPFVVFFTPLLAFSLIMLFTPKWAPTYSSTGTETAAWFGVFYTLEQVSVSSMTVVIAAWGTSLTHAVNERASLYTIDAIMDLFG-FCA----GVLITAVGTP-----AKTGVALAFIFLFQNLLLVSFLRDEQVTTGATAGGAARRHHVAETAIQVPFIAGLHMSFENKEFLTLFKAALFGSIVGTTV-NLLPIFFQVVMRIGDDAIESVYSIYAQLVIISAFFAVLSTATLNARWGKIRTLQFGVGCGAVYGLIAFCASYASVVELFYL-----SSVPAGMFAGIVAVNGNVLLSNSIDYDQLKTGFRRQSLYQCLIYVPMTFVSVAGSSIPLSIITAFG 488
            SP++ L S     ++   ++YG  +  G   LV     +  +Y     +   +L+LA  +A ++       FG+ +D  T  +GRR P++  ++PL A + + LF     P  S +    A WF   + L  V  ++  +   A G  LT   +ER+ L+ +     + G  CA    G+L+T+         A  GV    + +     +V+F+R+         G A R  +        PF  G+  +  N+ F  L    +  S+ G     L+P +   V++  + A     SI   +   SAF  +     L  R GK          G   G   F      +V   +L     SS  AG+F       G  + ++ IDYD+L TG RR++ Y     +    V++  ++IP++I+ + G
Sbjct:   16 SPARALHSDRERVSLRTLVVYGAPSFAGVAMLVPILIHMPKFYSDVVLVPLGYLALAIAVARAIDALGDPFFGWLTDHRT-RFGRRLPYIALWSPLCALAFLALFD----PPRSLSPQAAAVWFATMFVLYSVFHTAYGLPYWALGAELTLDYHERSKLFGVREAFSILGTICASVAPGLLVTSFHLDEREAFAWIGVVFGALLVLTCYGVVAFIRER-------PGFAERTSN--------PFAPGVRRALRNRPFRILLATYVVSSVTGAIPGTLMPYYNAYVLQPENKA--GWLSILLAVYFSSAFICLPGWVLLARRIGKKGAWLASFFMGITGGAGLFFLGPGDLVSATFLIAWAGSSFGAGLFL------GPAMQADVIDYDELHTGRRREAQYSAFWGMLPKLVAIPSAAIPIAILGSIG 414          
BLAST of NO03G03550 vs. NCBI_GenBank
Match: WP_099703260.1 (MFS transporter [Chroococcales cyanobacterium IPPAS B-1203] >PIG91342.1 hypothetical protein CSQ79_21875 [Chroococcales cyanobacterium IPPAS B-1203])

HSP 1 Score: 74.7 bits (182), Expect = 1.400e-9
Identity = 94/385 (24.42%), Postives = 171/385 (44.42%), Query Frame = 0
Query:   93 QKLIYGLGASFGFNALVVSNGTLMDYYEKTYGLSTSFLSLADFLAGSLTLY-----AVVG--FGYWSDITTSSYGRRKPFVVFFTPLLAFSLIMLFTPKWAPTYSSTGTETAAWFGVFYTLEQVSVSSMTVVIAAWGTSLTHAVNERASLYTIDAIMDLFGFCAGVLITAVGTPAKTGV-ALAFIFLFQNLLLVSFLRDEQVTTGATAGGAARRHHVAETAIQVPFIAGLHMSFENKEFLTLFKAALFGSIV-GTTVNLLPIFFQVVMRIGDDAIESVYSIYAQLVIISAFFAVLSTATLNARWGKIRTLQFGVGCGAVYGLIAFCASYA--------SVVELFYLSSVPAGMFAGIVAVNGNVLLSNSIDYDQLKTGFRRQSLY 461
            Q L+Y   AS G N + ++  T + Y+      S     L+  LAG L +      A++    GYWSD+  S +GRR+PF++F TP+   +L++L    W P  +S     A +   F+ +     + ++++   +  SL       A   T+    ++FG    +L   + +P  +   ALA   +   + LVS           T  G   +H    T   +   + LH++F+N++FL+LF + L   +     +  LP F  +V+       E+  SI+  +V+++   +  +   L+ R+     L+F +   AV   + F             +++ L  L  +  G F  + A+ G+V     +DYD+L T  RR+++Y
Sbjct:   14 QILLYSC-ASAGLNIISITVSTWLLYFYAPPPDSGRTQYLSVTLAGILLVVGRLWDAIIDPLIGYWSDVNHSRWGRRRPFLMFATPVCVIALLLL----WTPPVTSPSLLNAIY---FFFVTTAFYTCLSLISIPYDGSLPEMAAVPAEYVTLSMWKNIFGTTGVLLGALLASPLFSHAGALAMALVVGGIGLVS--------VWLTLFGLREKHR--STGGSLSLWSSLHLTFKNRQFLSLFASTLIIHVAYSMLLANLPYFVTLVV----GRSEADVSIFQAVVVLTMVVSAPTWNWLSQRYANRSLLRFAMLGLAVVSSLTFTVGLLPGIGVMAHALLMLALLGPLLGGYFVLVFAMMGSV-----VDYDELLTTHRREAIY 371          
BLAST of NO03G03550 vs. NCBI_GenBank
Match: KPJ77126.1 (MFS transporter [Deltaproteobacteria bacterium SG8_13])

HSP 1 Score: 74.3 bits (181), Expect = 1.800e-9
Identity = 113/455 (24.84%), Postives = 192/455 (42.20%), Query Frame = 0
Query:  118 YYEKTYGLSTSFLSLADFLAGSLTLYAVVGFGYWSDITTSSYGRRKPFVVFFTPLLAFSLIMLFT-PKWAPTYSSTGTETAAWFGV-FYTLEQVSVSSMTVVIAAWGTSLTHAVNERASLYTIDAIMDLFGFCAGVLITAVGTPAKTGVALAFIFLFQN--------LLLVSFLRDEQVTTGATAGGAARRHHVAETAIQVPFIA-GLHMSFENKEFLTLFKAALFGSIVGTTVNLLPIFFQVVMRIGDDAIESVYSIYAQLVIISAFFAVLSTATLNARWGKIRTLQFGVGCGAVYGLIAFCASYASVVELFYLSSVPAGMFAGIVAVNGNVLLSNSIDYDQLKTGFRRQSLYQCLIYVPMTFVSVAGSSIPLSIITAFGGLEAGQTP----PSAVVLTLRLWVSLVVTGCLLASYRQLSAFKLTEAVQQDVSAQLRRREQGQFLPPRDPIQEE 558
            +Y  T GL+ S L    F            FGY SD T +S+GRR+P++   +  +A S+ MLF  PK A  Y+      A WFGV  YTL  +  +++TV   + G  +T   NER SL+   A+ D      G+LI      A +   + + F   +           ++ L    +         A +    E A     +A G+     N+ F  L  +    +I       L +++   + + D A      ++  L  ++    +     ++ R+GK       +       +  F      VV L+ +  V +G+  G      + + ++ IDYD+L +G RR+  Y  L  +   F +  G    L I+    GL AG TP     + VV TLR+  +LV + C L ++    ++ +++ V  D+   + RR+ GQ +   DP+Q +
Sbjct:   35 FYTDTIGLNISVLGTLLFGVRIFDAVTDPLFGYLSDKTRTSFGRRRPYIAVGSLFVAISMFMLFVPPKAASGYA------ALWFGVSIYTL-FLFWTAVTVPYESLGPEITFDYNERTSLF---AMRD------GLLIAGTLAAASSPALVQWAFSLPDGAEGERLKYFWIAVLYTPLLVGTCWWCAIAIKEKFKEQARPTQSLATGMRELSHNRPFRILLVSYTISAIGNNLPATLILYYVEYVLLSDLA-----ELFLLLYFVTGIVCLPGWIKISHRFGKKNAWLASIVLNTGAFIWVFFLGPGDVV-LYAMLVVISGIGLGATLALPSAIQADVIDYDELLSGARREGQYIGLWSISKKFAAAVGVGAGLYIL----GL-AGYTPNAEQSATVVFTLRILYALVPSVCNLIAFGIALSYPISQGVHNDIRQAISRRQVGQQV--ADPLQPD 460          
BLAST of NO03G03550 vs. NCBI_GenBank
Match: KQS04122.1 (hypothetical protein ASG11_07580 [Sphingomonas sp. Leaf357])

HSP 1 Score: 74.3 bits (181), Expect = 1.800e-9
Identity = 101/449 (22.49%), Postives = 181/449 (40.31%), Query Frame = 0
Query:   95 LIYGLGASFGFNALVVSNGTLMDYYEKTYGLSTSFLSLADFLAGSLTLYAVVGFGYWSDITTSSYGRRKPFVVFFTPLLAFSLIMLFTPKWAPTYSSTGTETA--AWFGVFYTLEQVSVSSMTVVIAAWGTSLTHAVNERASL-----YTIDAIMDLFGFCAGVLIT--AVGTPAKTGVALAFIFLFQNLLLVSFLRDEQVTTGATAGGAARRHHVAETAIQVPFIAGLHMSFENKEFLTLFKAALFGSIVGTTVNLLPIFFQVVMRIGDDAIESVYSIYAQLVIISAFFAVLSTATL--NARWGKIRTLQFGVGCGAVYGLIAFCASYASVVELFYLSSVPAGMFAGIVAVNGNVLLSNSIDYDQLKTGFRRQSLYQCLIYVPMTFVSVAGSSIPLSIITAFGGLE---AGQTPPSAVVLTLRLWVSLVVTGCLLASYRQLSAFKLTE 530
            + +G+G       L  +N  L+ +    YGL+    +    ++     +A V  G  SD T S  GRR+P++V    LLA S++ +F    AP+++S  T     A   VFY     + +   V   A    +T   +ER+ L     Y +   + +       L+     G  A   +AL F  +     +V+FL            G AR    A  A        +  +  N+ F+ L        +   T ++ P FF+ ++ + +  + + +      +  SA F V  +  L  +AR GK  T    +       L    A +   + L YL  +  G+    + + G  +L ++++YD  KTG RR+ L+  L           G ++  +++ A+G ++   A    P + +  +R+ ++ V T   LA    L  + L E
Sbjct:   25 IAWGIGTLGPVTVLTATNALLLRFLTDFYGLAAGVAATLIAVSKFYDAFADVAMGVVSDRTKSKMGRRRPYLVLGAVLLAISIVAIFA---APSFASETTRLVYMAAILVFYA---TAYTVFNVPYMAMPGEMTRTYHERSELMRWRVYAVGLSIIIATALGPKLLDWFGGGQGAYARMALVFAPIVIGAGIVAFL------------GTARAPSAARVATHYTIGQQIRSAAGNRPFVILVAVKFITLMSLGTQSIFPFFFERILGVPNSVLGTYF------LCQSAMFLVAPSLWLWVSARVGKKATFLAALAISVPAWLSWSLAVHGEALALVYLRGIIIGISGSGIILMGQSMLPDTMEYDFRKTGLRREGLFAALYTTVEKLSGAVGVALVGALLGAYGYIQSRGATVVQPESALWAIRVTMAYVPTAITLAGIAALIGYNLDE 449          
BLAST of NO03G03550 vs. NCBI_GenBank
Match: WP_082472649.1 (MFS transporter [Sphingomonas sp. Leaf357])

HSP 1 Score: 74.3 bits (181), Expect = 1.800e-9
Identity = 101/449 (22.49%), Postives = 181/449 (40.31%), Query Frame = 0
Query:   95 LIYGLGASFGFNALVVSNGTLMDYYEKTYGLSTSFLSLADFLAGSLTLYAVVGFGYWSDITTSSYGRRKPFVVFFTPLLAFSLIMLFTPKWAPTYSSTGTETA--AWFGVFYTLEQVSVSSMTVVIAAWGTSLTHAVNERASL-----YTIDAIMDLFGFCAGVLIT--AVGTPAKTGVALAFIFLFQNLLLVSFLRDEQVTTGATAGGAARRHHVAETAIQVPFIAGLHMSFENKEFLTLFKAALFGSIVGTTVNLLPIFFQVVMRIGDDAIESVYSIYAQLVIISAFFAVLSTATL--NARWGKIRTLQFGVGCGAVYGLIAFCASYASVVELFYLSSVPAGMFAGIVAVNGNVLLSNSIDYDQLKTGFRRQSLYQCLIYVPMTFVSVAGSSIPLSIITAFGGLE---AGQTPPSAVVLTLRLWVSLVVTGCLLASYRQLSAFKLTE 530
            + +G+G       L  +N  L+ +    YGL+    +    ++     +A V  G  SD T S  GRR+P++V    LLA S++ +F    AP+++S  T     A   VFY     + +   V   A    +T   +ER+ L     Y +   + +       L+     G  A   +AL F  +     +V+FL            G AR    A  A        +  +  N+ F+ L        +   T ++ P FF+ ++ + +  + + +      +  SA F V  +  L  +AR GK  T    +       L    A +   + L YL  +  G+    + + G  +L ++++YD  KTG RR+ L+  L           G ++  +++ A+G ++   A    P + +  +R+ ++ V T   LA    L  + L E
Sbjct:   54 IAWGIGTLGPVTVLTATNALLLRFLTDFYGLAAGVAATLIAVSKFYDAFADVAMGVVSDRTKSKMGRRRPYLVLGAVLLAISIVAIFA---APSFASETTRLVYMAAILVFYA---TAYTVFNVPYMAMPGEMTRTYHERSELMRWRVYAVGLSIIIATALGPKLLDWFGGGQGAYARMALVFAPIVIGAGIVAFL------------GTARAPSAARVATHYTIGQQIRSAAGNRPFVILVAVKFITLMSLGTQSIFPFFFERILGVPNSVLGTYF------LCQSAMFLVAPSLWLWVSARVGKKATFLAALAISVPAWLSWSLAVHGEALALVYLRGIIIGISGSGIILMGQSMLPDTMEYDFRKTGLRREGLFAALYTTVEKLSGAVGVALVGALLGAYGYIQSRGATVVQPESALWAIRVTMAYVPTAITLAGIAALIGYNLDE 478          
BLAST of NO03G03550 vs. NCBI_GenBank
Match: WP_045220601.1 (MFS transporter [Desulfonatronum thioautotrophicum])

HSP 1 Score: 73.6 bits (179), Expect = 3.100e-9
Identity = 105/427 (24.59%), Postives = 175/427 (40.98%), Query Frame = 0
Query:  115 LMDYYEKTYGLSTSFLSLADFLAGSLTLYAVVGFGYWSDITTSSYGRRKPFVVFFTPLLAFSLIMLFTPKWAPTYSSTGTETAAWFGVFYTLEQVSVSSMTVVIAAWGTSLTHAVNERASLYTIDA---IMDLFG-----FCAGVLITAVGTPAKTGVALAF----IFLFQNLLLVSFLRDEQVTTGATAGGAARRHHVAETAIQVPFIAGLHMSFENKEFLTLFKAALFGSIVGTTVNLLPIFFQVVMRIGDDAIESVYSIYAQLVIISAFFAVLSTATLNARWGKIRT--LQFGVGCGAVYGLIAFCASYASVVELFYLSSVPAGMFAGIVAVNGNVLLSNSIDYDQLKTGFRRQSLYQCLIYVPMTFVSVAGSSIPLSIITAFGGLEAGQTPPSAVVLTLRLWVSLVVTGCLLASYRQLSAFKL 528
            L  +Y  T G     + L  F A  L   A    G  SD T++ +GRR+P++VF +P L   L+ L+ P        T  +   WFG+   L  V+ + + V   A G  LT   ++R +L+       I  +FG         +L+    TP  TG    F    + +    +L+ +L    +        +   H  + +   V F  GL + + NK F  +  AA   + +G  +    I + V   + D   E    IY  L  ++    +     + ARWGK  T      V  GA +G+       ++    F L +  +G+  G      + + ++ IDYDQL +G RR+  +  L  +     S  G  I L ++ A  G + G     +VV+ LR   + +   C LA+   ++ + L
Sbjct:   34 LPKFYTDTLGAGAGIVGLFIFGARILDGLADPLIGRLSDRTSTRWGRRRPYLVFASPFLGLCLLALYAPP-----ELTPHQAGIWFGLLLLLLSVTWTLVNVPWEALGPELTGDYHQRNTLFAWRDGLWITGIFGAVTLPLALSLLLDLPETP--TGERQKFLGYALVVAPATVLLCWLCATLIRERRPTATSPLEHGTSASPRHVAFRQGLSLLWRNKPF-RILTAAFAVAAIGANLPATLILYYVEHVLQDTQAE----IYLLLYFLAGIACLPLWVRIAARWGKKPTWMAAMAVNAGAFFGVFFLGPGQSTA---FALLAAISGIGFGAGMALPSSMQADVIDYDQLLSGRRREGAFIGLWSIIKKTSSALGLGIALPLL-ALAGYQPGTEQSESVVVLLRFLYAGLPCICTLAALLIIARYPL 444          
BLAST of NO03G03550 vs. NCBI_GenBank
Match: WP_079291656.1 (MFS transporter [Acidibacillus ferrooxidans] >OPG15086.1 hypothetical protein B2M26_13090 [Acidibacillus ferrooxidans])

HSP 1 Score: 73.6 bits (179), Expect = 3.100e-9
Identity = 99/397 (24.94%), Postives = 173/397 (43.58%), Query Frame = 0
Query:   95 LIYGLGASFGFNALVVSNGT-LMDYYEKTYGLSTSFLSLADFLAGSLTLYAVVGFGYWSDITTSSYGRRKPFVVFFTPLLAFSLIMLFTPKWAPTYSSTGTETAAWFGVFYTLEQVSVSSMTVVIAAWGTSL----THAVNERASLYTIDAIMDLFGFCAGVLITAVGTPAKTGVALAFIFLFQNLLLVSFLRDEQVTTGATAGGAARRHHVAETAIQVPFIAGLHMSFENKEFLTLFKAALFGSIVGT-TVNLLPIFFQVVMRIGDDAIESVYSIYAQLVIISAFFAVLSTATLNARWGKIRTLQFGVGCGAVYGL-IAFCASYASVVELFYLSSVPAGMFAGIVAVNGNVLLSNSIDYDQLKTGFRRQSLYQCLIYVPMTFVSVAGSSIPLSIIT 485
            L Y LG + G N    +  T  + YY     +S + + LA  + G          GY SD T S +GRR PF+V      A +  ++F P+WA ++ + G ++ +    ++    +++  + V++A   T+L       + ERA   +      L G   GV +  V        A+A   LF  L  V+F       T +  G   R    A+++  VP +  L ++F N+ FLT   A+ F  +     ++++P +   V+R    A  +  ++      + A   V    T+  R G  R++   +   A   L   F  SY++ +    ++ +P G     V +  +VLLS+ ID D+ ++G RR+ +Y    Y    FV   G +I   ++T
Sbjct:    9 LAYSLG-NLGINLYTQAFATYAVFYYVDRLRVSAALIGLAMAIHGLANALFNPLIGYLSDRTQSRFGRRMPFMVIGILPFALAFFLVFHPQWAISFHANGPQSQSAAFFYFLFSVLTLDMLFVIVALNWTALFPEMYTTLKERAQASSWRQFFGLLGMILGVAMPPVIDSTLGYEAMA--ALFAGLGFVTF-------TVSLLG--VRESPQAQSSANVPLLRALRLTFWNRAFLTYVGASFFVQLAFVFIISIMPFYTAYVLR----ATSAQTTLLLSTFFLIAIPCVYVWGTIARRIGAYRSMLASLFLFAAALLPFLFIRSYSAAL----IAILPLGAGVAGVLILLDVLLSDVIDDDEKRSGARREGMY----YGVQGFVVRFGITIQALVLT 381          
BLAST of NO03G03550 vs. NCBI_GenBank
Match: KYP80419.1 (hypothetical protein AYJ22_11200 [Acidibacillus ferrooxidans] >OAG93531.1 hypothetical protein AYW79_10170 [Acidibacillus ferrooxidans])

HSP 1 Score: 72.0 bits (175), Expect = 9.100e-9
Identity = 98/397 (24.69%), Postives = 172/397 (43.32%), Query Frame = 0
Query:   95 LIYGLGASFGFNALVVSNGT-LMDYYEKTYGLSTSFLSLADFLAGSLTLYAVVGFGYWSDITTSSYGRRKPFVVFFTPLLAFSLIMLFTPKWAPTYSSTGTETAAWFGVFYTLEQVSVSSMTVVIAAWGTSL----THAVNERASLYTIDAIMDLFGFCAGVLITAVGTPAKTGVALAFIFLFQNLLLVSFLRDEQVTTGATAGGAARRHHVAETAIQVPFIAGLHMSFENKEFLTLFKAALFGSIVGT-TVNLLPIFFQVVMRIGDDAIESVYSIYAQLVIISAFFAVLSTATLNARWGKIRTLQFGVGCGAVYGL-IAFCASYASVVELFYLSSVPAGMFAGIVAVNGNVLLSNSIDYDQLKTGFRRQSLYQCLIYVPMTFVSVAGSSIPLSIIT 485
            L Y LG + G N    +  T  + YY     +S + + LA  + G          GY SD T S +GRR PF+V      A +  ++F P+WA ++ + G ++ +    ++    +++  + V++A   T+L       + ERA   +      L G   GV +  V        A+A   LF  L  V+F       T +  G   R    A+++  VP +  L ++F N+ FLT   A+ F  +     ++++P +   V+     A  +  ++      + A   V    T+  R G  R++   +   A   L   F  SY++ +    ++ +P G     V +  +VLLS+ ID D+ ++G RR+ +Y    Y    FV   G +I   ++T
Sbjct:    6 LAYSLG-NLGINLYTQAFATYAVFYYVDRLRVSAALIGLAMAIHGLANALFNPLIGYLSDRTQSRFGRRMPFMVIGILPFALAFFLVFHPQWAVSFHANGPQSQSAAFFYFLFSVLTLDMLFVIVALNWTALFPEMYTTLKERAQASSWRQFFGLLGMILGVAMPPVIDSTLGYEAMA--ALFAGLGFVTF-------TVSLLG--VRESPQAQSSANVPLLRALRLTFWNRAFLTYVGASFFVQLAFVFIISIMPFYTAYVLH----ATSAQTTLLLSTFFLIAIPCVYVWGTIARRIGAYRSMLASLFLFAAALLPFLFIRSYSAAL----IAILPLGAGVAGVLILLDVLLSDVIDDDEKRSGARREGMY----YGVQGFVVRFGITIQALVLT 378          
BLAST of NO03G03550 vs. NCBI_GenBank
Match: WP_067565182.1 (MFS transporter [Acidibacillus ferrooxidans])

HSP 1 Score: 72.0 bits (175), Expect = 9.100e-9
Identity = 98/397 (24.69%), Postives = 172/397 (43.32%), Query Frame = 0
Query:   95 LIYGLGASFGFNALVVSNGT-LMDYYEKTYGLSTSFLSLADFLAGSLTLYAVVGFGYWSDITTSSYGRRKPFVVFFTPLLAFSLIMLFTPKWAPTYSSTGTETAAWFGVFYTLEQVSVSSMTVVIAAWGTSL----THAVNERASLYTIDAIMDLFGFCAGVLITAVGTPAKTGVALAFIFLFQNLLLVSFLRDEQVTTGATAGGAARRHHVAETAIQVPFIAGLHMSFENKEFLTLFKAALFGSIVGT-TVNLLPIFFQVVMRIGDDAIESVYSIYAQLVIISAFFAVLSTATLNARWGKIRTLQFGVGCGAVYGL-IAFCASYASVVELFYLSSVPAGMFAGIVAVNGNVLLSNSIDYDQLKTGFRRQSLYQCLIYVPMTFVSVAGSSIPLSIIT 485
            L Y LG + G N    +  T  + YY     +S + + LA  + G          GY SD T S +GRR PF+V      A +  ++F P+WA ++ + G ++ +    ++    +++  + V++A   T+L       + ERA   +      L G   GV +  V        A+A   LF  L  V+F       T +  G   R    A+++  VP +  L ++F N+ FLT   A+ F  +     ++++P +   V+     A  +  ++      + A   V    T+  R G  R++   +   A   L   F  SY++ +    ++ +P G     V +  +VLLS+ ID D+ ++G RR+ +Y    Y    FV   G +I   ++T
Sbjct:    9 LAYSLG-NLGINLYTQAFATYAVFYYVDRLRVSAALIGLAMAIHGLANALFNPLIGYLSDRTQSRFGRRMPFMVIGILPFALAFFLVFHPQWAVSFHANGPQSQSAAFFYFLFSVLTLDMLFVIVALNWTALFPEMYTTLKERAQASSWRQFFGLLGMILGVAMPPVIDSTLGYEAMA--ALFAGLGFVTF-------TVSLLG--VRESPQAQSSANVPLLRALRLTFWNRAFLTYVGASFFVQLAFVFIISIMPFYTAYVLH----ATSAQTTLLLSTFFLIAIPCVYVWGTIARRIGAYRSMLASLFLFAAALLPFLFIRSYSAAL----IAILPLGAGVAGVLILLDVLLSDVIDDDEKRSGARREGMY----YGVQGFVVRFGITIQALVLT 381          
The following BLAST results are available for this feature:
BLAST of NO03G03550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29849.11.100e-18262.81Major facilitator superfamily domain, general subs... [more]
GBD25869.16.300e-1024.12putative symporter YjmB [bacterium HR30][more]
WP_099703260.11.400e-924.42MFS transporter [Chroococcales cyanobacterium IPPA... [more]
KPJ77126.11.800e-924.84MFS transporter [Deltaproteobacteria bacterium SG8... [more]
KQS04122.11.800e-922.49hypothetical protein ASG11_07580 [Sphingomonas sp.... [more]
WP_082472649.11.800e-922.49MFS transporter [Sphingomonas sp. Leaf357][more]
WP_045220601.13.100e-924.59MFS transporter [Desulfonatronum thioautotrophicum... [more]
WP_079291656.13.100e-924.94MFS transporter [Acidibacillus ferrooxidans] >OPG1... [more]
KYP80419.19.100e-924.69hypothetical protein AYJ22_11200 [Acidibacillus fe... [more]
WP_067565182.19.100e-924.69MFS transporter [Acidibacillus ferrooxidans][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005541NSK005541Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G03550.1NO03G03550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572660gene_1549Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100017g73gene843Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G03550.1NO03G03550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G03550 ID=NO03G03550|Name=NO03G03550|organism=Nannochloropsis oceanica|type=gene|length=2595bp
AAACCACAGGCCTTTACTTGTTGTGCCGGGCCACAAGTTTCTGGAAGGTA
TTAGCTGCGCTCTCGATTCTCTTTATTGGCTCCACACGACAACCCGCGTC
CCCGCCCCACTTCGCATGGCCAACACCTCCAGTGCCAACAGCAGCAGCAG
AAGCAGCGGCAGCCACATTGCCAAGCTCCTGCCCCAGTCCCCACAAGATT
CACCGGTGCGCGTCTACAGTAAGAAGGCTGACCAACAAGGTGCCAACAGC
AGCAATAATGGGGCCACAGCGGCAGGCGTTGCGCTGGGCGGCTCTTCTGC
TTCGTCTTGGGATGTGGAGCAAGCCGATCAAAGCCCTACGCACAGCCCTT
CCAAGCAACTCTTGTCGGCCAGTCTTGCCCCGGCGATGATACAGAAGCTA
ATTTATGGCCTGGGTGCCTCCTTTGGATTTAACGCGCTGGTTGTGAGCAA
TGGAACTTTGATGGACTACTACGAAAAGACATATGGGTTGTCCACTTCCT
TCCTCAGCTTGGCTGATTTCCTGGCAGGATCCTTGACGCTGTACGCCGTC
GTAGGTTTTGGGTACTGGAGTGATATAACCACGAGCTCGTACGGGCGGCG
GAAGCCATTTGTGGTGTTTTTCACCCCGCTCTTGGCCTTTTCGCTTATCA
TGCTTTTTACTCCCAAATGGGCGCCTACGTACAGTAGCACGGGCACGGAG
ACAGCGGCCTGGTTTGGAGTGTTTTACACATTAGAGCAAGTATCGGTTTC
GTCGATGACGGTTGTGATTGCGGCATGGGGGACATCTTTGACGCATGCGG
TGAACGAACGAGCGTCTCTATATACCATCGACGCAATCATGGATTTGTTT
GGGTTTTGTGCCGGTGTTTTGATCACTGCCGTCGGCACGCCTGCCAAAAC
CGGGGTGGCGTTGGCATTCATCTTCCTCTTCCAGAATTTATTGCTCGTGT
CTTTTCTTCGCGATGAGCAGGTGACGACGGGTGCCACAGCTGGAGGAGCG
GCGAGGAGGCACCATGTGGCGGAGACTGCGATACAAGTCCCGTTTATTGC
GGGCTTGCACATGTCTTTTGAGAATAAGGAGTTTCTGACTTTGTTCAAGG
CTGCATTGTTTGGCAGTATTGTGGGCACCACGGTCAACCTCCTCCCAATC
TTCTTCCAAGTCGTCATGAGGATAGGCGATGACGCCATCGAAAGCGTCTA
TAGCATCTATGCCCAACTTGTCATCATTTCCGCTTTTTTTGCCGTTTTGT
CGACGGCCACTTTAAATGCACGATGGGGGAAAATTCGGACGCTTCAGTTT
GGGGTGGGCTGCGGAGCTGTGTATGGGTTGATTGCGTTTTGCGCCTCTTA
CGCGAGCGTGGTGGAGTTGTTCTACCTGAGCAGTGTCCCGGCTGGGATGT
TCGCGGGCATTGTGGCAGTGAACGGCAATGTGCTGTTGAGTAACTCGATC
GATTACGATCAGCTTAAGACAGGGTTTAGGCGGCAGTCGCTTTACCAATG
CCTCATTTATGTGCCCATGACTTTTGTCAGTGTCGCGGGCTCCTCCATTC
CTCTGTCGATCATCACGGCGTTCGGTGGGCTGGAAGCAGGACAGACCCCC
CCCTCCGCAGTCGTTCTGACTCTTCGGCTCTGGGTTTCATTGGTAGTGAC
TGGATGTTTGCTTGCCTCGTATCGTCAGCTGTCCGCCTTCAAGTTGACCG
AGGCAGTACAACAGGATGTCTCTGCCCAGCTCCGTCGGCGTGAGCAAGGA
CAGTTTTTGCCGCCCCGAGATCCGATCCAGGAAGAAGAGGACGAATCGGG
AGAGAATACATTGGGGGTAGAAGGCGAAATTGAGCTCTCACAGGATGTCA
AGGCAGGGGAAAACAGCAGCAGTGGTGGGGTTAACGGTATCAGCAGCAGT
GGTGAAGGTAAGGTGCGTGTGGACGTCGAGGTTGAGAATGACCCGCCGAG
TGCGTCGGTCAATGGGCCTTGGTACCCTATGGTGGCCTTCCTAGAGCTCA
ACTTTTCCTCTCAAGAGCTGGCGTTACTGACGCTGGATAATGGAAAGCAG
TGGAAGTTGGGCACATACCTGTTGAATCTGTTGGCTTGTGCTTTCTATGC
CGTCATTCTGTTTGTGCAGACGGTGGTAGCGGTCGACCAACGGGACGACT
TGACGGGCGCCATGATCTTTGTCTGCTTTTTAATGCTGGCTTCCAGTGTT
GCCATTTATGAGGGAGGGAGGTTTCATGCAATGAAGGAAGTTTACTACAT
GGGTGATGGACGGGACGTGGCGCGGTGGGCAAGGCAGCGTTTGACTGCGC
GAAAAAACGTGCGACCTTGGGTGTTGTACAATCCATTTCGACTCGTACTG
CGGACGGTCATCGCCCACGTGGGTTTCAGCATTGTCCTGCTTTCTGTGGT
TTTCTCATTGCATTTGCCGCTTAAAGGAGGAATAGAGAATTAGGCGCATT
AAAAATGGGGGGGGTAAGGGGGGTACATGTTCATGTGTACGATGACTGTC
GAGAAAAGTTGAAATTGAAATAGAATAACAAATAAACGGGCGGTGCCCTT
CCATGTATGATGATGAAAGCTAATTGATAAAAGCAATTATAAAGA
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protein sequence of NO03G03550.1

>NO03G03550.1-protein ID=NO03G03550.1-protein|Name=NO03G03550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=776bp
MANTSSANSSSRSSGSHIAKLLPQSPQDSPVRVYSKKADQQGANSSNNGA
TAAGVALGGSSASSWDVEQADQSPTHSPSKQLLSASLAPAMIQKLIYGLG
ASFGFNALVVSNGTLMDYYEKTYGLSTSFLSLADFLAGSLTLYAVVGFGY
WSDITTSSYGRRKPFVVFFTPLLAFSLIMLFTPKWAPTYSSTGTETAAWF
GVFYTLEQVSVSSMTVVIAAWGTSLTHAVNERASLYTIDAIMDLFGFCAG
VLITAVGTPAKTGVALAFIFLFQNLLLVSFLRDEQVTTGATAGGAARRHH
VAETAIQVPFIAGLHMSFENKEFLTLFKAALFGSIVGTTVNLLPIFFQVV
MRIGDDAIESVYSIYAQLVIISAFFAVLSTATLNARWGKIRTLQFGVGCG
AVYGLIAFCASYASVVELFYLSSVPAGMFAGIVAVNGNVLLSNSIDYDQL
KTGFRRQSLYQCLIYVPMTFVSVAGSSIPLSIITAFGGLEAGQTPPSAVV
LTLRLWVSLVVTGCLLASYRQLSAFKLTEAVQQDVSAQLRRREQGQFLPP
RDPIQEEEDESGENTLGVEGEIELSQDVKAGENSSSGGVNGISSSGEGKV
RVDVEVENDPPSASVNGPWYPMVAFLELNFSSQELALLTLDNGKQWKLGT
YLLNLLACAFYAVILFVQTVVAVDQRDDLTGAMIFVCFLMLASSVAIYEG
GRFHAMKEVYYMGDGRDVARWARQRLTARKNVRPWVLYNPFRLVLRTVIA
HVGFSIVLLSVVFSLHLPLKGGIEN*
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Synonyms
Publications