NO03G03400, NO03G03400 (gene) Nannochloropsis oceanica

Overview
NameNO03G03400
Unique NameNO03G03400
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1595
Alignment locationchr3:1017016..1018610 +

Link to JBrowse

Properties
Property NameValue
DescriptionCaax amino terminal protease family domain-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1017016..1018610 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR003675CAAX_protease
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
BLAST of NO03G03400 vs. NCBI_GenBank
Match: EWM29775.1 (caax amino terminal protease family domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 607.4 bits (1565), Expect = 3.900e-170
Identity = 309/379 (81.53%), Postives = 328/379 (86.54%), Query Frame = 0
Query:  121 FTAWRRIQHQRAFLMQPLQSSAMASPPGESGDAWGASELPSYKIRPDWAXXXXXXXXXXXXXXXXXXXXIALYFFHMLVLSKLAMPFPFQLVPNSHGLFQSIGMDSLAGLLVLGIMAYFRHSRGLPMRPIIFGDRPLPFNPPKKGRGKVWRILALLMVAYLTSGSASKWVEDVFGLSDLNVALGRAVQVLAGHLVWVTLGVAILKMQAGGPGRGPFFGKKSVWMKSTFNTYWLWWAIGGYYVSSLAFHVADTINQVVLPASAFEVDSVVTQMINPEGNDVMAMLVGSLAPCVSAPWWEEVLYRGFLLPALYLFYPPDVATLVSAVIFAAHHMSMSGMIPLTTLGYLWAVLYLLSGNLLVPIAIHSLWNSRVFLGSLLGI 500
            F A RR Q +    + PLQSSA ASP  E  ++W ASELPSY+ RP  A                    +ALYFFHMLVLSK+AMPFPFQLVPN+HGLFQSIGMDSLAGLLVLG  AYFR +RGLP++P++FG RPLPFNPPK+GRGKVWRIL LLMVAYLTSGSASKWVEDVFGLS+LNVALGRAVQVLAGHLVWV LGV ILK QAG  G  PFFGKKSVWMKS++NTYWLWWAIGGYYVSSLAFHVADT+NQVVLPASAFEVDSVVTQMINPEGNDV+AMLVGSLAPCVSAPWWEEVLYRGFLLPALYLFYP DVATLVSAVIFAAHHMSMSGMIPLTTLGYLWAVLYLLSGNLLVPIAIHSLWNSRVFLGSLLGI
Sbjct:  122 FLARRRRQQRCLSRVHPLQSSAAASPMDEGEESWSASELPSYRERPRGAPAWTPTWIVTLHPLIQMLVMVALYFFHMLVLSKVAMPFPFQLVPNTHGLFQSIGMDSLAGLLVLGAAAYFRRARGLPLKPVVFGARPLPFNPPKRGRGKVWRILFLLMVAYLTSGSASKWVEDVFGLSELNVALGRAVQVLAGHLVWVLLGVGILKTQAGEGGDKPFFGKKSVWMKSSWNTYWLWWAIGGYYVSSLAFHVADTVNQVVLPASAFEVDSVVTQMINPEGNDVVAMLVGSLAPCVSAPWWEEVLYRGFLLPALYLFYPADVATLVSAVIFAAHHMSMSGMIPLTTLGYLWAVLYLLSGNLLVPIAIHSLWNSRVFLGSLLGI 500          
BLAST of NO03G03400 vs. NCBI_GenBank
Match: CEM21913.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 301.2 bits (770), Expect = 5.900e-78
Identity = 173/345 (50.14%), Postives = 217/345 (62.90%), Query Frame = 0
Query:  197 MLVLSKLAMPFPFQLVPNSHGLFQSIGMDSLAGLLVLGI------------MAYFRHSRGLPMRPIIFGDRP------------------LPFNP-----PKKGRGKVWRILALLMVAYLTSGSASKWVE-DVFGLSDL----NVALGRAVQVLAGHLVWVTLGVAILKMQAGGPGRGPFFGKKSVWMKSTFNTYWLWWAIGGYYVSSLAFHVADTINQVVLPASAFEV--DSVVTQMINPEGNDVMAMLVGSLAPCVSAPWWEEVLYRGFLLPALYLFYPPDVATLVSAVIFAAHHMSMSGMIPLTTLGYLWAVLYLLSGNLLVPIAIHSLWNSRVFLGSLLGI 500
            MLVLS+  + FP QL+PN +GLFQSIG+DS AGL+ L               A  R  R     P + G+RP                  LP +P     P K R K   +LALL++AY +SG  +   E  ++GLS L    ++A+ R++QVL GHL+WV  G  IL     G G  PFF  +  W +  +   WLWW +GGYYVSSL F+ AD INQ+VLP S F+   +SVVT+MINPE ND++A+ VGS+APCVSAPWWEEVLYRGF LPAL +F PP VA  VSAV+FA HHMS+  MIPL TLG  W +LY+LS NLLV + IH++WNSRVFLGS LG+
Sbjct:    1 MLVLSRSCIAFPVQLIPNKYGLFQSIGLDSCAGLVALAAAYIGRVSMLTNRAAALRGHRDDKALPPVDGNRPNATTAVVTSGEDGQPDPLLPLSPYPWKIPVKSRPKALIVLALLILAYFSSGYGAVVFEWSLYGLSALGVPISIAMHRSLQVLLGHLLWVGTGCLIL-----GIGLRPFFPPRGSWYRLQWRRSWLWWVVGGYYVSSLLFNGADVINQLVLPPSVFQEGGESVVTKMINPENNDILALAVGSIAPCVSAPWWEEVLYRGFTLPALSVFMPPWVALPVSAVLFAVHHMSIQSMIPLATLGLAWGILYMLSNNLLVTVLIHAMWNSRVFLGSFLGL 340          
BLAST of NO03G03400 vs. NCBI_GenBank
Match: CBJ33141.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 282.7 bits (722), Expect = 2.200e-72
Identity = 158/337 (46.88%), Postives = 210/337 (62.31%), Query Frame = 0
Query:  190 IALYFFHMLVLSKLAMPFPFQLVPNSHGLFQSIGMDSLAGLLVLGIMAYFRHSRGLPMRPIIFG-----------------DRPLPFNPPKKGRG-----KVWRILALLMVAYLTSGSASKWVED-VFGLS----DLNVALGRAVQVLAGHLVWVTLGVAILKMQAGGPGRGPFFGKKSVWMKSTFNTYWLWWAIGGYYVSSLAFHVADTINQVVLPASAFEVDSVVTQMINPEGNDVMAMLVGSLAPCVSAPWWEEVLYRGFLLPALYLFYPPDVATLVSAVIFAAHHMSMSGMIPLTTLGYLWAVLYLLSGNLLVPIAIHSLWNSRVFLGSLLGI 500
            I LYFFHML LSK  + FP QL+PN+HGLF S+G+D+ AG  VLG+ A+ R   GLP+ P + G                         P K  G     K+     +L+ AY  SG  S   E  ++GLS     ++VA+ R++QVL  HLVWV +GV IL M      R  F  +K  W+   + + WLWW +GGY+VSS  F++AD  NQ + P    + +SVV ++INPE ND+ AM VGS+APC++APWWEEVLYRGFLLPAL L+ P   A    + +FAAHHM++  M+PL+ LG +W++LYL SGNLLV + IH++WNSRVFLGSLLG+
Sbjct:  216 IGLYFFHMLHLSKSGLTFPIQLIPNNHGLFHSVGLDTAAGFAVLGVAAWSRLRSGLPLFPPLGGRGVEGKGXXXXXXXXXXXXXXXVKVPWKLEGARVKKKLPLTFTVLIFAYFLSGLGSTVCEYLLYGLSYLGVGMSVAMHRSLQVLLSHLVWVYMGVRILSMAV----RSFFDTEKGSWVGMKWRSNWLWWVVGGYFVSSSLFNMADLANQFLCPLPP-DTESVVVKIINPENNDIAAMAVGSIAPCMTAPWWEEVLYRGFLLPALTLYLPLKAALPAGSFLFAAHHMNLQAMLPLSVLGLVWSLLYLYSGNLLVTVLIHAMWNSRVFLGSLLGL 547          
BLAST of NO03G03400 vs. NCBI_GenBank
Match: XP_005819270.1 (hypothetical protein GUITHDRAFT_121552 [Guillardia theta CCMP2712] >EKX32290.1 hypothetical protein GUITHDRAFT_121552 [Guillardia theta CCMP2712])

HSP 1 Score: 256.9 bits (655), Expect = 1.300e-64
Identity = 132/306 (43.14%), Postives = 194/306 (63.40%), Query Frame = 0
Query:  190 IALYFFHMLVLSKLAMPFPFQLVPNSHGLFQSIGMDSLAGLLVLGIMAYFRHSRGLPMRPIIFGDRPLPFNPPKKGRGKVWRILALLMVAYLTSGSASKWVEDVFGLSDLNVALGRAVQVLAGHLVWVTLGVAILKMQAGGPGRGPFFGKKSVWMKSTFNTYWLWWAIGGYYVSSLAFHVADTINQVVLPASAFEVDSVVTQMINPEGNDVMAMLVGSLAPCVSAPWWEEVLYRGFLLPALYLFYPPDVATLVSAVIFAAHHMSMSGMIPLTTLGYLWAVLYLLSGNLLVPIAIHSLWNSRVFLGS 496
            +A Y FH+L LSK +  FP QL+PNS G FQSIG+DS+AGL+V+  +   R   G+ + P +      P+  P++ +  +    A L++AY+ SG  +                     VL GHL+WV +G+ IL     G    PFF  +  W++   N+ W+WW +G Y+VS+L F++AD INQ +LP++ F+ +SVV++++NPE  D++AM +G++ PC+SAP +EEVLYRGFLLPAL    P   A   S+++FA HH+++ G++PL+ LG  WA++Y  S NLLV I IH+LWNSRVFLGS
Sbjct:  109 LACYAFHLLYLSKNSWNFPEQLIPNSKGAFQSIGLDSIAGLVVVAGVLVCRKLAGVSVIPPLLQSSNPPWRIPREAKKILGGTTAYLLLAYIASGYGA---------------------VLLGHLMWVYMGIRIL-----GTKHKPFFPPQGTWLRWRTNSNWVWWVVGSYFVSALLFNIADLINQFILPSTIFDEESVVSKLVNPENKDLLAMAIGAVGPCISAPIFEEVLYRGFLLPALAAMMPLQWAIPTSSILFAVHHLNIGGILPLSVLGLAWAIIYTQSRNLLVTILIHALWNSRVFLGS 388          
BLAST of NO03G03400 vs. NCBI_GenBank
Match: XP_002286185.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95826.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 256.5 bits (654), Expect = 1.700e-64
Identity = 159/387 (41.09%), Postives = 215/387 (55.56%), Query Frame = 0
Query:  165 RPDWAXXXXXXXXXXXXXXXXXXXXIALYFFHMLVLSKLAMPFPFQLVPNSHGLFQSIGMDSLAGLLVLGIMAYFR-------HSRGLPMR-PIIFGD-----RPLPFNPPKKGRG-----------KVWRILA--LLMVAYLTSGSASKWVEDVFGLS-----DLNVALGRAVQVLAGHLVWVTLGVAILKMQAGGPGRGPFFG---------------KKSV----WMKSTFNTYWLWWAIGGYYVSSLAFHVADTINQVVLPASAF--EVDSVVTQMINPEGNDVMAMLVGSLAPCVSAPWWEEVLYRGFLLPALYLFYPPDVATLVSAVIFAAHHMSMSGMIPLTTLGYLWAVLYLLSGNLLVPIAIHSLWNSRVFLGSLLGI 500
            RPDWA                    + LY FH+ +L++  + FPFQL+PN  G FQSIG+DS+AG+L    + + R        S G  +  P I+ D      P    P KK  G           +   ++A  LL VAY ++G  S   E+    +      L VA+ R++ VL GHL WV +G  IL   AG     PFFG               +K++    W  + ++TYWLWW IGGY+VS+  F++AD +NQ++LP   F  + + VV+Q+INPE  D +A LVG +APC+SAPWWEEVLYRG+LLPAL LF     +  VS V+F+ HH+S+ G IPL  LG+ WA LY  SGN+LV + IH +WNSRVFLGS LG+
Sbjct:  143 RPDWALPWMPTSLVTLRPAYQFIIGLLLYIFHLRILTQHGITFPFQLIPNDEGWFQSIGLDSIAGMLAFAGLVWLRKASVAHADSSGAKVAIPPIWSDPTEKEAPWKLLPKKKKTGADATTSQQPHPRTTSVVAFMLLTVAYFSTGRFSLLFENGLYAAAGYGFPLTVAMHRSLVVLLGHLTWVLVGSGIL---AGVLSPKPFFGGGWATKKGNTSNSKKEKTLRPYRWYTNKWDTYWLWWTIGGYFVSAWLFNIADFMNQILLPPQLFAQQAEGVVSQLINPENLDFLASLVGYIAPCLSAPWWEEVLYRGYLLPALRLFMGFWPSVFVSGVLFSVHHLSVMGAIPLAVLGWTWAALYAKSGNILVTMLIHGMWNSRVFLGSWLGL 526          
BLAST of NO03G03400 vs. NCBI_GenBank
Match: XP_005709210.1 (CAAX amino terminal protease family protein [Galdieria sulphuraria] >EME32690.1 CAAX amino terminal protease family protein [Galdieria sulphuraria])

HSP 1 Score: 255.8 bits (652), Expect = 2.900e-64
Identity = 140/315 (44.44%), Postives = 195/315 (61.90%), Query Frame = 0
Query:  190 IALYFFHMLVLSKLAMPFPFQLVPNSHGLFQSIGMDSLAGLLVLGIMAYFRHSRGLPMRPIIFGDRPLPFNPPKKGRGKVWRILALLMVAYLTSGSASKWVEDVFGLSD-----LNVALGRAVQVLAGHLVWVTLGVAILKMQAGGPGRGPFFGKKSVWMKSTFNTYWLWWAIGGYYVSSLAFHVADTINQVVLPASAFEVDSVVTQMINPEGNDVMAMLVGSLAPCVSAPWWEEVLYRGFLLPALYLFYPPDVATLVSAVIFAAHHMSMSGMIPLTTLGYLWAVLYLLSGNLLVPIAIHSLWNSRVFLGSLLGI 500
            + LY  H+L LSK       +L P   G F ++G+D+++GLLV+ +    R   G+ + P +      P+  P     K+     LL +AYL SG A+ + E +  L       L VA  RA +VL GHL+WV + V IL     G    PFF  K  W+K  + + WLWW IGGYY S L F++AD+ NQ +LP+S F  +SVV++++ PE ND+ AM +G++ PC++AP +EEVLYRG+LLPAL    P   A  +S+V+FA HH+++  +IPLT LG+ WA+LY  S NLLV I IH+LWNSRVFLGSLLG+
Sbjct:  137 LGLYVVHLLFLSKKGWDISKKLAPPDRGRFDAVGLDTISGLLVMIVAFVLRRMAGVNLIPNLIEVPKPPWKVPTATYDKLGATTLLLFLAYLASGYAAVFCEQLLLLLSFYGVPLTVASLRAWKVLLGHLIWVYMAVKIL-----GNRLEPFFPPKGSWIKWRWRSNWLWWVIGGYYGSGLLFNIADSFNQWILPSSLFNDESVVSKLVKPENNDLFAMAIGAIGPCITAPVFEEVLYRGYLLPALATIMPIRFAIPLSSVLFAVHHLNIGSVIPLTVLGWAWALLYAHSRNLLVTILIHALWNSRVFLGSLLGL 446          
BLAST of NO03G03400 vs. NCBI_GenBank
Match: OSX78333.1 (hypothetical protein BU14_0111s0002 [Porphyra umbilicalis])

HSP 1 Score: 255.8 bits (652), Expect = 2.900e-64
Identity = 142/318 (44.65%), Postives = 199/318 (62.58%), Query Frame = 0
Query:  192 LYFFHMLVLSKLAMPFPFQLVPNSHGLFQSIGMDSLAGLLV-LGIM----AYFRHSRGLPMRPIIFGDRPLPFNPPKKGRGKVWRILALLMVAYLTSGSASKWVEDVFGL-----SDLNVALGRAVQVLAGHLVWVTLGVAILKMQAGGPGRGPFFGKKSVWMKSTFNTYWLWWAIGGYYVSSLAFHVADTINQVVLPASAFEVDSVVTQMINPEGNDVMAMLVGSLAPCVSAPWWEEVLYRGFLLPALYLFYPPDVATLVSAVIFAAHHMSMSGMIPLTTLGYLWAVLYLLSGNLLVPIAIHSLWNSRVFLGSLLGI 500
            LY  H+L  S      P   +PN+ GLF ++G D+ AG +V LG +       R  R LP  P++  + P P++  +  + K+     LL+VAYL SG  +  +E V  L       L +A  RA +VL GHL+WV  GV IL+ +       PFF ++  W+   + T WL WA+GGYYVS++ F+ AD +N  +LP+S F  D+VV+++INPE  DVMAM VG + PC++AP +EEVLYRGFLLPAL  + P   A  VS+V+FA HH+++ G++PLT LG++WA+LY  S NL V I IH++WNSRVFL S LG+
Sbjct:  174 LYALHVLYFSTGGWKLPQSAIPNAKGLFSNVGFDTAAGAVVALGTLLIRKVLLRLPRALP--PLLSSEHP-PWSVSRADKRKIANTTVLLVVAYLASGYGAVLIEQVLFLLVGLGVPLTIATTRAWKVLLGHLIWVFAGVKILRSKL-----NPFFPRRGSWLSWKWRTNWLAWAVGGYYVSAMFFNGADVLNHWLLPSSLFNEDTVVSKLINPENRDVMAMAVGCVGPCITAPVFEEVLYRGFLLPALACYLPMWAAIPVSSVLFAVHHLNIQGVLPLTVLGFIWAILYTKSNNLAVTIIIHAMWNSRVFLSSFLGL 483          
BLAST of NO03G03400 vs. NCBI_GenBank
Match: EJK75171.1 (hypothetical protein THAOC_03116 [Thalassiosira oceanica])

HSP 1 Score: 254.6 bits (649), Expect = 6.400e-64
Identity = 153/384 (39.84%), Postives = 208/384 (54.17%), Query Frame = 0
Query:  165 RPDWAXXXXXXXXXXXXXXXXXXXXIALYFFHMLVLSKLAMPFPFQLVPNSHGLFQSIGMDSLAGLLVLGIMAYFR-----HSRG------LPMRPIIFG----DRPLPFNPPKKGRGK--------------VWRILALLMVAYLTSGSASKWVEDVFGLS-----DLNVALGRAVQVLAGHLVWVTLGVAILKMQAGGPGRGPFFG-------------KKSVWMKSTFNTYWLWWAIGGYYVSSLAFHVADTINQVVLPASAF--EVDSVVTQMINPEGNDVMAMLVGSLAPCVSAPWWEEVLYRGFLLPALYLFYPPDVATLVSAVIFAAHHMSMSGMIPLTTLGYLWAVLYLLSGNLLVPIAIHSLWNSRVFLGSLLGI 500
            RP WA                    + +Y FH+  L++  + FP QL+PN  G FQSIG+DSLAG+L    + + R     HS        + + P+  G    + P      +K R K                  + LL   Y ++G  S + E++   +      L V + R++ VL GHL WV +G AIL          PFFG             +   W  + ++TYWLWW +GGY+VS+  F+++D +NQ+VLP   F  + + VV+Q+INPE ND MA LVG +APC+SAPWWEEVLYRG+LLPAL LF     +  VS V+F+AHH+S+ G IPL  LG+LWA LY  SGN+LV I IH +WNSRVFLGS LG+
Sbjct:  200 RPSWALPWMPDWLVTLRPRTQFVVGLGMYIFHLRFLTQYGIAFPVQLIPNDEGWFQSIGLDSLAGMLSFAGLVWLRKASVEHSESSTEGATIAVPPLWTGPKGAEAPWSLGSRRKRRRKSDGDEEKVDHPRSSSIIAMVLLTFGYFSTGRFSLFFENILYAAAGYGFPLTVPMHRSLVVLLGHLAWVVVGSAILAFVLSPK---PFFGGGLEPASEGRAKRRPRRWYTNRWDTYWLWWTMGGYFVSAWLFNISDFVNQIVLPPYLFAQQAEGVVSQLINPENNDFMASLVGYIAPCLSAPWWEEVLYRGYLLPALGLFMGFWPSVFVSGVLFSAHHLSVMGAIPLAVLGWLWAALYAKSGNILVTILIHGMWNSRVFLGSWLGL 580          
BLAST of NO03G03400 vs. NCBI_GenBank
Match: XP_005538284.1 (unknown protease [Cyanidioschyzon merolae strain 10D] >BAM82248.1 unknown protease [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 241.9 bits (616), Expect = 4.300e-60
Identity = 155/412 (37.62%), Postives = 222/412 (53.88%), Query Frame = 0
Query:  137 PLQSSAMASPPGESGDAWGASELPSYKI-RPDWAXXXXXXXXXXXXXXXXXXXXIALYFFHMLVLSK--LAMPFPFQLV--------------------PNSHGLFQ------------SIGMDSLAGLLVLGIMAYFR-------HSRGLPMRPII--FGDRPLPFNPPKKGRGKVWRILALLMVAYLTSGSASKWVE------DVFGLSDLNVALGRAVQVLAGHLVWVTLGVAILKMQAGGPGRGPFFGKKSVWMKSTFNTYWLWWAIGGYYVSSLAFHVADTINQVVLPASAFEVDSVVTQMINPEGNDVMAMLVGSLAPCVSAPWWEEVLYRGFLLPALYLFYPPDVATLVSAVIFAAHHMSMSGMIPLTTLGYLWAVLYLLSGNLLVPIAIHSLWNSRVFLGSLLG 499
            P  +++ +  P +   A  +   P Y   RPDWA                    +A Y FH+LVLS+   A P  FQ +                    PN+    +            ++G DS+AGL+++ ++ +FR         R   + P+I     R LP+  PK  R K+     +L+ AYL SG  +   E       V GL  L V   RA++VL GHL+WV +GV IL     G    PFF  +  WM++  ++ W WWAIG YYVSSL F++AD +NQ ++P +    +SVV+++I+PE  D +AM +GS+ PC++AP +EEVLYRG+LLPA+  F P  +A  VS+V+FAAHH+++ GM+PL+ LG+ WA  Y++SGNL V    H LWNSRVFL SLLG
Sbjct:   94 PAHAASGSVTPAKPSSASNSIWQPDYSTERPDWAPAWLPAFVYRMPALVQVVVVLAFYAFHLLVLSRHSWAPPGAFQPLLRKIVLAAPHTASFADPLDKPNAKAAAEALEAIASGKEPVTVGYDSIAGLVLILVILWFRWMARKRNPQRYTVLPPLIRPMPSRGLPWELPKTARSKIGMTTLMLLGAYLLSGYGAVVCEQVLLFLSVIGL-PLTVPTLRALKVLLGHLMWVFMGVKIL-----GNNLKPFFPPRGKWMRARVHSNWCWWAIGVYYVSSLLFNIADFVNQFIVPQNILNEESVVSKLIHPENQDGIAMAIGSIGPCITAPVFEEVLYRGYLLPAIACFMPVWLAIPVSSVLFAAHHLNLGGMLPLSVLGWAWAYTYVMSGNLFVCAFTHGLWNSRVFLSSLLG 499          
BLAST of NO03G03400 vs. NCBI_GenBank
Match: XP_002178250.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49915.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 229.2 bits (583), Expect = 2.900e-56
Identity = 139/375 (37.07%), Postives = 190/375 (50.67%), Query Frame = 0
Query:  165 RPDWAXXXXXXXXXXXXXXXXXXXXIALYFFHMLVLSKLAMPFPFQLVPNSHGLFQSIGMDSLAGLLVLGIMAYFR--------HSRGLPMRPIIF----GDRP--LPFNPPKKGRGKVWRILALLMVAYLTSGSASKWVEDVFGLS----DLNVALGRAVQVLAGHLVWVTLGVAILKMQAGGPGRGPFFGKKSV--------------------WMKSTFNTYWLWWAIGGYYVSSLAFHVADTINQVVLPASAFE--VDSVVTQMINPEGNDVMAMLVGSLAPCVSAPWWEEVLYRGFLLPALYLFYPPDVATLVSAVIFAAHHMSMSGMIPLTTLGYLWAVLYLLSGNLLVPIAIHSLWNSRVFLGSLLGI 500
            RP WA                    +  Y  H+LVLS+  + FP QL+PN  G F SIG DS+AG+LV       R         S      P +F     D P  LP N  +        I+ L+   + T   +  W + ++ +S     L   + R++ VL GHL W+  G  +L+     P    FFG K+V                    W +S+    W+WW +GGY+VSS  F++ D INQ VLP +  E   +SVV+Q++NPE ND+ A + G +APC++APWWEEVLYRGFLL  L        A  V  +IF+AHHMS++  +PL  LG+ WA+LY    NL   I +H+LWNSRVFLGS LG+
Sbjct:   87 RPSWAWVWMPTWLFTMNPLAQFLTTMGFYLLHILVLSQRQLVFPIQLIPNEKGQFASIGYDSIAGILVAVCYTILRKASTQSSLQSSSEAPFPALFKSPTSDAPWKLPSNHIRHRVSSFLTIILLVQAYFFTGRFSLFWEDTLYTMSGLGWPLTAPMHRSLCVLFGHLSWLITGTLLLRFVPRPP---RFFGPKAVYNTDDDDAVSSKSPAKPAYRWFRSSIRRNWVWWVVGGYFVSSWLFNITDVINQFVLPTAVLEDAQESVVSQLVNPEHNDIAASVAGYIAPCLTAPWWEEVLYRGFLLAGLSQLLGYPWAVFVQGLIFSAHHMSLTAALPLAVLGWTWAILYTKCRNLFTVIFVHALWNSRVFLGSWLGL 458          
The following BLAST results are available for this feature:
BLAST of NO03G03400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29775.13.900e-17081.53caax amino terminal protease family domain-contain... [more]
CEM21913.15.900e-7850.14unnamed protein product [Vitrella brassicaformis C... [more]
CBJ33141.12.200e-7246.88conserved unknown protein [Ectocarpus siliculosus][more]
XP_005819270.11.300e-6443.14hypothetical protein GUITHDRAFT_121552 [Guillardia... [more]
XP_002286185.11.700e-6441.09predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_005709210.12.900e-6444.44CAAX amino terminal protease family protein [Galdi... [more]
OSX78333.12.900e-6444.65hypothetical protein BU14_0111s0002 [Porphyra umbi... [more]
EJK75171.16.400e-6439.84hypothetical protein THAOC_03116 [Thalassiosira oc... [more]
XP_005538284.14.300e-6037.62unknown protease [Cyanidioschyzon merolae strain 1... [more]
XP_002178250.12.900e-5637.07predicted protein [Phaeodactylum tricornutum CCAP ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005558NSK005558Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G03400.1NO03G03400.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572621gene_1535Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100022g5gene859Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G03400.1NO03G03400.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G03400 ID=NO03G03400|Name=NO03G03400|organism=Nannochloropsis oceanica|type=gene|length=1595bp
ACAGGACAATAAGATGCCACCCTTCGCCCCTAACAGGGGAGGCTCGCGCT
GTCTCGGTTGTGGCAGCCTGGTGATCATCATCGTGCTCGCTTCATCAGCA
TCATCCTCGGTTGCCTTCGGCCCGCCTTTTCGCACTGCTTTGCCGCGTCT
ACACCGCATATCATTGCCCTACGGTAGCAGCGCCGGCAGCAGCTCGTTCC
CGAACGTGCGAAGAATCTCCTTGCCATGCGCACCCTTGTCTTCTCCTTCT
GGTTTCGCGAATTACCGCATATTGCCTACCCTCTTTACCCGGCCAAGCTC
GAGCGAGGACCAAGAAGCACGACAAGTCGACCTTTCCGGACAACCACGCT
GGCGTCGCGCTGCCAACCATCTATTTACAGCCTGGAGAAGAATACAGCAC
CAACGTGCATTCCTCATGCAACCCTTACAAAGCTCAGCCATGGCTTCACC
CCCTGGTGAAAGTGGGGACGCGTGGGGGGCGAGTGAATTGCCTTCCTACA
AAATCAGACCCGATTGGGCTCCAGCTTGGGTACCTACGTGGGCAGTAACG
CTGCATCCGCTCATTCAAGTCGTCATTATGATAGCTTTGTATTTTTTTCA
CATGCTCGTGTTGAGTAAACTGGCCATGCCCTTCCCCTTTCAGTTGGTGC
CGAATTCCCATGGTCTGTTTCAGAGCATTGGCATGGACTCACTTGCCGGC
TTGCTCGTCCTGGGCATCATGGCCTACTTTCGTCATTCACGCGGGCTGCC
CATGCGGCCTATTATTTTTGGGGATCGTCCGCTGCCGTTTAACCCCCCGA
AGAAAGGAAGGGGGAAGGTGTGGCGGATTTTGGCCTTGTTGATGGTGGCT
TATCTGACGTCAGGCTCGGCGAGCAAGTGGGTGGAGGATGTATTTGGCTT
GTCGGACCTAAATGTGGCCTTAGGGAGGGCGGTGCAAGTGTTGGCGGGGC
ACTTGGTGTGGGTGACTTTGGGGGTGGCAATTTTGAAGATGCAGGCGGGG
GGACCAGGAAGGGGACCTTTCTTCGGAAAGAAGAGTGTCTGGATGAAATC
GACTTTCAACACGTATTGGTTGTGGTGGGCCATTGGGGGTTACTACGTCT
CATCGTTGGCGTTCCACGTGGCAGACACCATCAATCAGGTGGTGTTGCCG
GCGTCGGCGTTTGAGGTTGACTCGGTTGTGACTCAGATGATTAATCCGGA
GGGGAATGATGTAATGGCTATGTTGGTTGGATCGCTTGCCCCCTGTGTGT
CGGCGCCTTGGTGGGAAGAGGTATTGTATCGTGGATTTTTATTGCCAGCC
TTGTATCTGTTTTATCCTCCCGATGTGGCGACGCTTGTGAGTGCGGTGAT
ATTTGCAGCGCACCACATGAGTATGAGTGGAATGATTCCCTTGACGACCT
TAGGTTACTTGTGGGCGGTCCTGTATCTTTTGTCGGGCAACCTACTCGTA
CCCATAGCCATTCACTCGCTTTGGAACTCGCGTGTGTTTTTGGGTTCTCT
TCTTGGTATCTAGTACGCACGGTAATGTGCAAAACATGTGTATCAGAATT
AAACGAGCTAAAGCAAAACGTTTGCTACCGTGATAGAGAGGAAAA
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protein sequence of NO03G03400.1

>NO03G03400.1-protein ID=NO03G03400.1-protein|Name=NO03G03400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=500bp
MPPFAPNRGGSRCLGCGSLVIIIVLASSASSSVAFGPPFRTALPRLHRIS
LPYGSSAGSSSFPNVRRISLPCAPLSSPSGFANYRILPTLFTRPSSSEDQ
EARQVDLSGQPRWRRAANHLFTAWRRIQHQRAFLMQPLQSSAMASPPGES
GDAWGASELPSYKIRPDWAPAWVPTWAVTLHPLIQVVIMIALYFFHMLVL
SKLAMPFPFQLVPNSHGLFQSIGMDSLAGLLVLGIMAYFRHSRGLPMRPI
IFGDRPLPFNPPKKGRGKVWRILALLMVAYLTSGSASKWVEDVFGLSDLN
VALGRAVQVLAGHLVWVTLGVAILKMQAGGPGRGPFFGKKSVWMKSTFNT
YWLWWAIGGYYVSSLAFHVADTINQVVLPASAFEVDSVVTQMINPEGNDV
MAMLVGSLAPCVSAPWWEEVLYRGFLLPALYLFYPPDVATLVSAVIFAAH
HMSMSGMIPLTTLGYLWAVLYLLSGNLLVPIAIHSLWNSRVFLGSLLGI*
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Synonyms
Publications