NO03G03130, NO03G03130 (gene) Nannochloropsis oceanica

Overview
NameNO03G03130
Unique NameNO03G03130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2606
Alignment locationchr3:934982..937587 -

Link to JBrowse

Properties
Property NameValue
DescriptionRetinal pigment epithelial membrane protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:934982..937587 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR004294Carotenoid_Oase
Homology
BLAST of NO03G03130 vs. NCBI_GenBank
Match: EWM29728.1 (retinal pigment epithelial membrane protein [Nannochloropsis gaditana])

HSP 1 Score: 945.7 bits (2443), Expect = 7.000e-272
Identity = 455/572 (79.55%), Postives = 504/572 (88.11%), Query Frame = 0
Query:   10 LLLAFSSSLADGFRLPRLLGASASSPSPTALEATTXXXXXXXXDLAGTTGTWNYEGWIKGFETARTETSYEIKDIVEGSIPKDLTGTLFRNGHAKFDVEGLEIAHPFDGDGMISAVTFKDGRAFFRNRFVETEGYKREKQSKKIEYRGTFGTQKPGGWIRNIFDTRRKNVANTNVIFWGNRLLALWEGGLPHLMDPMTLQTFGESRLAKVLKSNQNLCAHPRYDPATDRYVFFSTDPDPRKTKVTLYEFDRDFKLVAERSEDMEGFSLLHDMVITPSYYVFFKAPLTLQPLSWLLGLTGVASCIKFQDSQPAVAYLIPRSSPSKPMIPIPVDPHFSFHFSNAYDDASTGETVVDIIRVPKLYLTDTNGVTGNPIWKTVNYEQNVPKSTLWRYRLNPSLATHTKQELWSVYCDFPSIPVSRTGQQYRYTYLAAGRDPILPTPVGVVAKFDVEKGELVDAWTAEPNEFISETVVVPKDKGGKEG-AAEDDVYLMTYVFNGDTCLSQILIFDAQSLGKGPLARLQLNSNIPLSLHGTWAPDAVYEGEDILRKFKCYSGVSRFGKIESGMAPIFEF 581
            L+L F  SL  GFR P L     S  S TAL+A T        +LAGTTGTWN EGWIKGFETAR+ETSYE+KDI EGSIP D+ GTLFRNGHAKFDV GLEIAHPFDGDGMISA+TF+DGRAFFRNRFVETEGYKRE++S+KIEYRGTFGTQKPGGW+ NIFD RRKNVANTNVIFWGNRLLALWEGGLPHLMDP+TLQT GESRLA VLK NQNLCAHPRYDPATDRYVFFSTDPDPRKTK+TLYEFD DFKLVAERSE+++GFSLLHDMVITPSYYVFFKAPL LQPL WLLG TGVASCI+FQD QPAVAYLIPR++PS+PM+ IPVDPHFSFHFSNA+DD+STGE VVDIIRVPKLYLTDT GVTG+PIW++V+YE++VPKSTLWRYRLNP+ ATHTK ELW +YCDFPSIP SRTGQ YRYTYLAAGRDP +PTPVGVVAKFDVE G LVD+W AEP EFISETVVVP+    + G   ED+ YLMTYVFNG+T LSQ+LIFD Q LGKGP+ARLQL+SNIPLSLHGTWAP+AVY+GE+ILRKF  ++G+ +F K+ESGMAPIFEF
Sbjct:   12 LVLCFGISL--GFRPPSLFSPMPS--SLTALQAAT--STTDSRNLAGTTGTWNREGWIKGFETARSETSYEVKDIKEGSIPTDIRGTLFRNGHAKFDVNGLEIAHPFDGDGMISALTFQDGRAFFRNRFVETEGYKREQKSQKIEYRGTFGTQKPGGWLANIFDMRRKNVANTNVIFWGNRLLALWEGGLPHLMDPITLQTLGESRLANVLKRNQNLCAHPRYDPATDRYVFFSTDPDPRKTKITLYEFDTDFKLVAERSENLQGFSLLHDMVITPSYYVFFKAPLDLQPLPWLLGRTGVASCIRFQDDQPAVAYLIPRNNPSRPMVEIPVDPHFSFHFSNAFDDSSTGEVVVDIIRVPKLYLTDTKGVTGDPIWRSVDYERDVPKSTLWRYRLNPAQATHTKAELWDLYCDFPSIPASRTGQPYRYTYLAAGRDPTVPTPVGVVAKFDVECGRLVDSWRAEPQEFISETVVVPRQGHEERGEGLEDEGYLMTYVFNGETSLSQVLIFDVQKLGKGPVARLQLDSNIPLSLHGTWAPEAVYDGEEILRKFTLFTGLKKFEKVESGMAPIFEF 577          
BLAST of NO03G03130 vs. NCBI_GenBank
Match: WP_036533129.1 (Apocarotenoid-15,15'-oxygenase [Neosynechococcus sphagnicola] >KGF72694.1 Apocarotenoid-15,15'-oxygenase [Neosynechococcus sphagnicola sy1])

HSP 1 Score: 394.0 bits (1011), Expect = 7.800e-106
Identity = 207/496 (41.73%), Postives = 294/496 (59.27%), Query Frame = 0
Query:   55 AGTTGTWNYEGWIKGFETARTETSYEIKDIVEGSIPKDLTGTLFRNGHAKFDVEGLEIAHPFDGDGMISAVTFKDGRAFFRNRFVETEGYKREKQSKKIEYRGTFGTQKPGGWIRNIFDTRRKNVANTNVIFWGNRLLALWEGGLPHLMDPMTLQTFGESRLAKVLKSNQNLCAHPRYDP----ATDRYVFFSTDPDPRKTKVTLYEFDRDFKLVAERSEDMEGFSLLHDMVITPSYYVFFKAPLTLQPLSWLLGLTGVASCIKFQDSQPAVAYLIPRSSPSKPMIPIPVDPHFSFHFSNAYDDASTGETVVDIIRVPKLYLTDTNGVTGNPIWKTVNYEQNVPKSTLWRYRLNPSLATHTKQELWSVYCDFPSIPVSRTGQQYRYTYLAAGRDPILPTPVGVVAKFDVEKGELVDAWTAEPNEFISETVVVPKDKGGKEGAAEDDVYLMTYVFNGDTCLSQILIFDAQSLGKGPLARLQLNSNIPLSLHGTWAPD 547
            A +   +  + W  G+ +   E  Y I+DI EG+IP +L+GTLFRNG    DV+G  I HPFDGDGMI A+ F  GRA+FRNRFV T GY  E+ + KI YRG FGTQKPGGW+ N+ D + KN+ANT+VI+WG +LLALWE   PH + P TL+T G   L  +L S  +  AHPR DP       R V F+    P  +++T+YEFD   ++V ++++ + GF+ LHD  +TP+YY+FF+ P+   PL +LLGL G A CIKFQ  QP    +IPR      +  +  DP F FH +NA++    GE +V    V  +       V  N  +  V + + +P S LWR+ LN +  +  +Q L    C+FP++P ++ GQ YRY Y+AA  DP    P+  + K D+  G+    W+A P  F+ E V VP+  G   G  EDD +L+T +++     S ++I DAQ L +G +ARL L  ++P  LHG++ P+
Sbjct:    6 ANSAPAYTLKDWQGGYRSQPQEFDYWIEDI-EGAIPPELSGTLFRNGPGLLDVKGEAIRHPFDGDGMICAIAFAGGRAYFRNRFVRTAGYVAEQAAGKILYRGVFGTQKPGGWLANVLDLKLKNIANTHVIYWGGKLLALWEAAHPHRLHPQTLETLGLDNLDGLLASGASFAAHPRIDPGGSHGDTRLVNFAVKAGP-TSEITVYEFDLAGQVVTQQTQSIPGFAFLHDFALTPNYYLFFQNPVAFNPLPYLLGLRGAAECIKFQAQQPTRILVIPRRG-GGAVQRLATDPCFVFHHANAFEQ---GENLV----VDSVCYQSFPQVQPNQTYLDVKFAE-LPPSQLWRFDLNLATQSVQRQCLDQRSCEFPTLPPTQVGQPYRYLYIAAAHDPQGNAPLQAILKLDLASGDR-QIWSAAPRGFVGEPVFVPRPPGISNG-KEDDGWLLTLIYDAAHHRSDLVILDAQDLTQGAIARLHLKHHVPYGLHGSFTPE 488          
BLAST of NO03G03130 vs. NCBI_GenBank
Match: WP_088893578.1 (Apocarotenoid-15,15'-oxygenase [Leptolyngbya ohadii])

HSP 1 Score: 390.6 bits (1002), Expect = 8.600e-105
Identity = 205/495 (41.41%), Postives = 290/495 (58.59%), Query Frame = 0
Query:   58 TGTWNYEGWIKGFETARTETSYEIKDIVEGSIPKDLTGTLFRNGHAKFDVEGLEIAHPFDGDGMISAVTFKDGRAFFRNRFVETEGYKREKQSKKIEYRGTFGTQKPGGWIRNIFDTRRKNVANTNVIFWGNRLLALWEGGLPHLMDPMTLQTFGESRLAKVLKSNQNLCAHPRYDPA------TDRYVFFSTDPDPRKTKVTLYEFDRDFKLVAERSEDMEGFSLLHDMVITPSYYVFFKAPLTLQPLSWLLGLTGVASCIKFQDSQPAVAYLIPRSSPSKPMIPIPVDPHFSFHFSNAYDDASTGETVVDIIRVPKLYLTDTNGVTGNPIWKTVNYEQNVPKSTLWRYRLNPSLATHTKQELWSVYCDFPSIPVSRTGQQYRYTYLAAGRDPILPTPVGVVAKFDVEKGELVDAWTAEPNEFISETVVVPKDKGGKEGAAEDDVYLMTYVFNGDTCLSQILIFDAQSLGKGPLARLQLNSNIPLSLHGTWAPD 547
            T +++   W KG+ + + E  Y I D +EG IP +L GTLFRNG    D+ G +I HPFDGDGMISA+TF++GRA++RNRFV T+ +  E+Q+ KI YRG FGTQKPGGW+ N  D R KN+ANT VI+WG RLLALWE   PH +DP TL+T G   L  +L+  +   AHPR DPA          V FS  P    T +T+YE D   KL+ +++  + GF+ +HD  +TP+Y +FF+ P+   PL ++ GL G   C++F+  +P  A +IPR   S P+  IP+   F FH +NA++    G+  VD I    L       +     ++ V++    P   LWR+R N +  + T++ L S  C+FPS+   R  + YRY Y+ A  D I   P+  V K D++ GE    WTA P  F  E V VP+        AEDD +L+T +F+     SQ++I +AQ L + P+ARL L  ++P  LHGT+ P+
Sbjct:   12 TLSYDLNQWQKGYRSLKQEYDYPI-DEIEGQIPAELEGTLFRNGPGLLDINGQQIHHPFDGDGMISAITFQNGRAYYRNRFVRTQAFLEEQQAGKILYRGVFGTQKPGGWMANFMDLRLKNIANTQVIYWGGRLLALWEAAEPHRLDPATLETIGLDYLDGILEPGEAFGAHPRVDPACAFDNGAPCLVNFSIKPKGLSTTITIYELDPAGKLLRKQARSVPGFAFIHDFALTPNYCIFFQNPVDFNPLPFVAGLRGAGQCLEFKGDRPTQALIIPRQG-SAPIQTIPIQAGFVFHHANAFE--QEGDLFVDSICYDAL-----PSIEPGDDYRQVDFAALAP-GQLWRFRFNLAQNSVTRELLESRCCEFPSLHPDREARPYRYVYMGAAHDAIGNAPLQAVLKLDIQTGER-QLWTAAPTGFTGEPVFVPR----PNATAEDDGWLLTLIFDAKQERSQLVILNAQDLTQ-PIARLHLKHHVPYGLHGTFTPE 490          
BLAST of NO03G03130 vs. NCBI_GenBank
Match: WP_024125526.1 (all-trans-8'-apo-beta-carotenal 15,15'-oxygenase Diox1 [Thermosynechococcus sp. NK55a] >AHB89142.1 all-trans-8'-apo-beta-carotenal 15,15'-oxygenase Diox1 [Thermosynechococcus sp. NK55a])

HSP 1 Score: 387.9 bits (995), Expect = 5.600e-104
Identity = 206/489 (42.13%), Postives = 289/489 (59.10%), Query Frame = 0
Query:   66 WIKGFETARTETSYEIKDIVEGSIPKDLTGTLFRNGHAKFDVEGLEIAHPFDGDGMISAVTFKDGRAFFRNRFVETEGYKREKQSKKIEYRGTFGTQKPGGWIRNIFDTRRKNVANTNVIFWGNRLLALWEGGLPHLMDPMTLQTFGESRLAKVLKSNQNLCAHPRYDPATDRYVFFSTDPDPRKTKVTLYEFDRDFKLVAERSEDMEGFSLLHDMVITPSYYVFFKAPLTLQPLSWLLGLTGVASCIKFQDSQPAVAYLIPRSSPSKPMIPIPVDPHFSFHFSNAYDDASTGETVVDIIRVPKLYLTDTNGVTGNPIWKTVNYEQNVPKSTLWRYRLNPSLATHTKQELWSVY----CDFPSIPVSRTGQQYRYTYLAAGRDPILPTPVGVVAKFDVEKGELVDAWTAEPNEFISETVVVPK--DKG-----GKEGAAEDDVYLMTYVFNGDTCLSQILIFDAQSLGKGPLARLQLNSNIPLSLHGTW 544
            W  G E+   E  Y I+D VEG++P DL GTL+RNG    +  G+ +AHPFDGDGMI A  F+ GR  FRNR+V T G+  E+++ ++ YRG FGTQ+PGGW+ N  DTR KN+ANT+VI+W  +LLALWE  LPH +DP+TL+T G   L  +LK +    AHPR+DP T R V F   P    T++ LYEFD   + V++ +  + GF+ +HD  +TP+Y + F+ P+   PL +LLGL G A CI+F   +P   +L+PR   S  M+ +P    F FH +NAY+         D I V  +  +    +     ++ VN+   +P S LWR RLNP     TK   W V     C+FP +  ++ GQ YRYTYLAAG DP    P+  + + D + GE    W+A P  F+SE + VP+   KG     G +G  E+D +L+  V++     SQ+LIFDA ++  GP+ARL L  +IP  LHG++
Sbjct:   14 WRGGTESLTQEYDYWIED-VEGTVPPDLVGTLYRNGPGLLERGGVSLAHPFDGDGMICAFRFEKGRVHFRNRYVRTAGFLAEEKANRLLYRGVFGTQRPGGWLANFLDTRVKNIANTHVIYWAGKLLALWEASLPHRLDPVTLETIGLDNLGGLLKESDAFAAHPRFDPQTQRLVNFGVKPG-LNTRIRLYEFDATGQCVSQPTFQIPGFAFIHDFALTPNYAIVFQNPVQFNPLPYLLGLRGAAQCIQFNAQEPTRVWLLPRRGGSPQMLTMPA--CFVFHHANAYEAG-------DEIHVESIAYSHFPNLEPGMDFREVNFAA-LPASLLWRIRLNPK----TKAVDWQVVSDRPCEFPVVHPAKVGQPYRYTYLAAGHDPKTNAPLQALWRRDRQTGE-EQFWSAAPRGFVSEPIFVPRGLQKGDFLWQGAQG--EEDGWLLQVVYDASCHKSQLLIFDAAAISAGPVARLHLKHHIPYGLHGSF 483          
BLAST of NO03G03130 vs. NCBI_GenBank
Match: WP_011055870.1 (lignostilbene alpha-beta-dioxygenase [Thermosynechococcus elongatus] >NP_680806.1 lignostilbene-alpha,beta-dioxygenase [Thermosynechococcus elongatus BP-1] >BAC07568.1 lignostilbene-alpha,beta-dioxygenase [Thermosynechococcus elongatus BP-1] >BAY52377.1 lignostilbene-alpha,beta-dioxygenase [Thermosynechococcus vulcanus NIES-2134])

HSP 1 Score: 387.9 bits (995), Expect = 5.600e-104
Identity = 205/489 (41.92%), Postives = 290/489 (59.30%), Query Frame = 0
Query:   66 WIKGFETARTETSYEIKDIVEGSIPKDLTGTLFRNGHAKFDVEGLEIAHPFDGDGMISAVTFKDGRAFFRNRFVETEGYKREKQSKKIEYRGTFGTQKPGGWIRNIFDTRRKNVANTNVIFWGNRLLALWEGGLPHLMDPMTLQTFGESRLAKVLKSNQNLCAHPRYDPATDRYVFFSTDPDPRKTKVTLYEFDRDFKLVAERSEDMEGFSLLHDMVITPSYYVFFKAPLTLQPLSWLLGLTGVASCIKFQDSQPAVAYLIPRSSPSKPMIPIPVDPHFSFHFSNAYDDASTGETVVDIIRVPKLYLTDTNGVTGNPIWKTVNYEQNVPKSTLWRYRLNPSLATHTKQELWSVY----CDFPSIPVSRTGQQYRYTYLAAGRDPILPTPVGVVAKFDVEKGELVDAWTAEPNEFISETVVVPK--DKG-----GKEGAAEDDVYLMTYVFNGDTCLSQILIFDAQSLGKGPLARLQLNSNIPLSLHGTW 544
            W  G E+   E  Y I++ VEG++P DL GTL+RNG    +  G+ +AHPFDGDGMI A  F+ GR  FRNR+V T G+  E+++ ++ YRG FGTQKPGGW  N  DTR KN+ANT+VI+W  +LLALWE  LPH +DP+TL+T G   L  +L+      AHPR+DP T R V F   P    T++ LYEFD + + V++ +  + GF+ +HD  +TP+Y + F+ P+   PL +LLGL G A C++F   +P   +L+PR      M+ +P  P F FH +NAY+       V D I V  +  +    +     ++ VN+   +P S LWR +LNP     TK   W V     C+FP +  ++ GQ YRYTYLAAG DP    P+  + + D + GE    W+A P  F+SE +VVP+   KG     G +G  E+D +L+  V++     SQ+LIFDA ++  GP+ARL L  +IP  LHG++
Sbjct:   14 WRGGTESLTQEYDYWIEE-VEGTVPTDLVGTLYRNGPGLLERGGVPLAHPFDGDGMICAFRFEKGRVHFRNRYVRTAGFLEEEKANRLLYRGVFGTQKPGGWFANFLDTRVKNIANTHVIYWAGKLLALWEASLPHRLDPVTLETIGLDNLGGLLRERDAFAAHPRFDPQTQRLVNFGVQPG-LNTRIRLYEFDANGQCVSQPTFQIPGFAFIHDFALTPNYAIVFQNPVQFNPLPYLLGLRGAAQCLQFNAQEPTRVWLLPRRGGPPQMLTMP--PCFVFHHANAYE-------VGDEIHVESIAYSHFPNLEPGMDFREVNFAA-LPASLLWRIQLNPK----TKAVDWQVVSDRPCEFPVVHPAKVGQPYRYTYLAAGHDPKTNAPLQALWRCDRQTGE-EQFWSAAPRGFVSEPIVVPRGLQKGDFLWQGAQG--EEDGWLLQVVYDASCHKSQLLIFDAAAISAGPVARLHLKHHIPYGLHGSF 483          
BLAST of NO03G03130 vs. NCBI_GenBank
Match: WP_015175906.1 (beta-carotene 15,15'-monooxygenase [Oscillatoria nigro-viridis] >AFZ06601.1 Beta-carotene 15,15'-monooxygenase [Oscillatoria nigro-viridis PCC 7112])

HSP 1 Score: 384.0 bits (985), Expect = 8.100e-103
Identity = 201/498 (40.36%), Postives = 288/498 (57.83%), Query Frame = 0
Query:   55 AGTTGTWNYEGWIKGFETARTETSYEIKDIVEGSIPKDLTGTLFRNGHAKFDVEGLEIAHPFDGDGMISAVTFKDGRAFFRNRFVETEGYKREKQSKKIEYRGTFGTQKPGGWIRNIFDTRRKNVANTNVIFWGNRLLALWEGGLPHLMDPMTLQTFGESRLAKVLKSNQNLCAHPRYDPAT----DRYVFFSTDPDPRKTKVTLYEFDRDFKLVAERSEDMEGFSLLHDMVITPSYYVFFKAPLTLQPLSWLLGLTGVASCIKFQDSQPAVAYLIPRSSPSKPMIPIPVDPHFSFHFSNAYDDASTGETVVDIIRVPKLYLTDTNGVTGNPIWKTVNYEQNVPKSTLWRYRLNPSLATHTKQELWSVYCDFPSIPVSRTGQQYRYTYLAAGRDPILPTPVGVVAKFDVEKGELVDAWTAEPNEFISETVVVPKDKGGKEGAAEDDVYLMTYVFNGDTCLSQILIFDAQSLGKGPLARLQLNSNIPLSLHGTWAPDAV 549
            A    +++   W +G+E+   E+ Y I DI EG IP  L GT FRNG    D+ G  I HPFDGDGM+ A+   +GRA FRNRFV TEGY  E+++ KI +RG FGTQKPGGW+ NIFD + KN+ANTN+I+WG +LLALWE   P+ +DP TL+T G   L  +L+  +   AHPR +       DR V FS  P    T +T+YE D   KL+   +  + GF+ LHDMVITP+Y +FF+ P++  PL + LGL   A CI+F  ++P  A LIPR+   +  I +  +P F FH  NA+++   GE  VD +        D +       ++ +++E +VP   LWR++LN    T   Q + +  C+FP++  +  GQ YRY Y+ A   P    P+  + K D   GE    W+A P  F  E V VP+     +  AEDD +L+  +++     S ++I DA+ + KGP+ARL L  +IP  LHG++ P+ +
Sbjct:   12 AAQKSSYDRTDWQRGYESQPNESDYWIDDI-EGEIPAGLQGTFFRNGPGLLDINGQRIHHPFDGDGMVCAIAISEGRAHFRNRFVRTEGYLAEQEAGKILHRGVFGTQKPGGWLANIFDVKIKNIANTNIIYWGEKLLALWEAAQPYRLDPRTLETLGLDTLDGILEPGEAFAAHPRIEKGKNGKGDRLVNFSVKPGLSST-ITIYELDESGKLLQRHAHAIPGFAFLHDMVITPNYCIFFQNPVSFNPLLFFLGLRSAAQCIQFSPNKPTQAILIPRNGTDEVKI-LETEPCFVFHHCNAWEE--EGEVFVDSVCYESFPTVDADA-----DFRELDFE-SVPAGELWRFKLNLQEETVQHQVVETRCCEFPTLHPNNVGQPYRYLYIGAADAPTGNAPLQAILKMDFVTGER-QIWSAAPRGFAGEPVFVPR----PDAVAEDDGWLLLLMYDAANHRSTLVILDARDITKGPVARLHLKQHIPYGLHGSFTPNVL 493          
BLAST of NO03G03130 vs. NCBI_GenBank
Match: WP_071518340.1 (Apocarotenoid-15,15'-oxygenase [Geitlerinema sp. PCC 9228])

HSP 1 Score: 383.6 bits (984), Expect = 1.100e-102
Identity = 199/506 (39.33%), Postives = 293/506 (57.91%), Query Frame = 0
Query:   58 TGTWNYEGWIKGFETARTETSYEIKDIVEGSIPKDLTGTLFRNGHAKFDVEGLEIAHPFDGDGMISAVTFKDGRAFFRNRFVETEGYKREKQSKKIEYRGTFGTQKPGGWIRNIFDTRRKNVANTNVIFWGNRLLALWEGGLPHLMDPMTLQTFGESRLAKVLKSNQNLCAHPRYDPATD--RYVFFSTDPDPRKTKVTLYEFDRDFKLVAERSEDMEGFSLLHDMVITPSYYVFFKAPLTLQPLSWLLGLTGVASCIKFQDSQPAVAYLIPRSSPSKPMIPIPVDPHFSFHFSNAYDDASTGETVVDIIRVPKLYLTDTNGVTGNPIWKTVNYEQNVPKSTLWRYRLNPSLATHTKQELWSVYCDFPSIPVSRTGQQYRYTYLAAGRDPILPTPVGVVAKFDVEK--GELVDA-------------WTAEPNEFISETVVVPKDKGGKEGAAEDDVYLMTYVFNGDTCLSQILIFDAQSLGKGPLARLQLNSNIPLSLHGTWAPD 547
            T +++   W +G+E+   E +Y I+DI EG IP+ L GTLFRNG    D+ G  IAHPFDGDGM+SA+TF+DG+A+++NRFV TEG+  E+++ KI YRG FGTQKPG W+ NIFD + KN+ANT++I+WG +LLALWEG +PH ++P  L+T G   L  +L S+Q   AHPR +P +D  R + FS +P    T +T++EF  D KL+ ++S  + GF+ LHDM ITP Y +F + P+   P+ ++LGL G A C++F  +QP    LIPR    +  I +  DP F FH +NA+ + +        I +  +       V  +  ++ +N+E + P   LWR+ ++      T + L    C+FPS+     GQ YRY YLAA   P    P+  + K D++K  G  + A             W+  P  F  E V VP          EDD +++   +N     S ILIF+A+ +  GP+ARL L  ++P  LHG++  +
Sbjct:    8 TASYSRSDWQQGYESQPNEYNYWIEDI-EGEIPQQLHGTLFRNGPGLLDINGQPIAHPFDGDGMVSAITFRDGKAYYQNRFVRTEGFLAEQKAGKILYRGVFGTQKPGSWLANIFDMKAKNIANTHIIYWGGKLLALWEGSVPHQLNPQNLETIGVDHLDGILASDQPFAAHPRIEPGSDDKRLINFSVEPG-LSTTITIFEFASDGKLLQKKSHSIPGFAFLHDMAITPEYCIFCQNPVQFNPIPYVLGLRGAAQCLRFDPNQPTKIVLIPRQQGKEVKI-LETDPCFVFHHANAFTEGNR-------IYLDSICYDYFPNVEPDTDFREINFE-DYPAGKLWRFCIDLDSEKVTPELLVRRTCEFPSLHPQNVGQSYRYLYLAATHAPTGNAPLQALLKVDLQKLQGTSIPAEFDPAAEEGCSQFWSLAPRSFAGEPVFVPH----PNATEEDDGWVLMLTYNAAHHRSDILIFNAKDISPGPIARLHLKHHVPYGLHGSFVEE 498          
BLAST of NO03G03130 vs. NCBI_GenBank
Match: AMR99691.1 (9-cis-epoxycarotenoid dioxygenase [Scrippsiella trochoidea])

HSP 1 Score: 383.6 bits (984), Expect = 1.100e-102
Identity = 208/506 (41.11%), Postives = 297/506 (58.70%), Query Frame = 0
Query:   59 GTWNYEGWIKGFETARTETSYEIKDIVEGSIPKDLTGTLFRNGHAKFDVEGLEIAHPFDGDGMISAVTFK-DGRAFFRNRFVETEGYKREKQSKKIEYRGTFGTQKPGGWIRNIFDTRRKNVANTNVIFWGNRLLALWEGGLPHLMDPMTLQTFGESRLAKVLKSNQNLCAHPRYDPATDRYVFFSTDPDPR--KTKVTLYEFDR-DFKLVAERSEDMEGFSLLHDMVITPSYYVFFKAPLTLQPLSW--LLGLT----GVASCIKFQDSQPAVAYLIPRSSPSKPMIPIPVDPHFSFHFSNAYDDASTGETVVDIIRVPKLYLTDTNGVTGNPIWKTVNYEQNVPKSTLWRYRLNPSLATHTKQELWSVYCDFPSIPVSRTGQQYRYTYLAAGRDPILPTPVGVVAKFDVEKGELVDAWTAEPNEFISETVVVPKDKGGKEGAAEDDVYLMTYVFNGDTCLSQILIFDAQSLGKGPLARLQLNSNIPLSLHGTWAPDAVYEGEDI 555
            G ++ E W+  F+    E  Y    +    +PKDL GT FRN  AKF V   +I HPFD DGM+ A+TF   G+  +RNRFV T+GY  E ++ ++ YR  F + KPGGW  NI D R KN+ANT+V+ WG RLLALWEGG P+ +D  +L TFGES LA  LK   N  AHPRYD A DR V F   PDP   +T++T +EF R  F+++    + + GF   HD V+T +YYV   AP +   LSW  LLG+      +   I+F   QP    +IPR   S+P+I + VD HF FHF+N ++D   G  ++D++RV  L L D +  +  P+W T ++ Q +PKS LWRY ++P+    ++++L     DFPSI    +G+++R+ Y AA        P   +AK D E+G   + W  EP++F+ E++ VP+     E A EDD Y++  +F+G    S++L+FDAQS+  GP+ R+ L   +P  LHG W+ D V   E +
Sbjct:   38 GDYDREAWLAAFQNVEEEVCY---TVACEDLPKDLKGTYFRNSPAKFKVGEDQIMHPFDADGMVFAMTFDGSGQVHYRNRFVRTKGYCEELEAGRMIYRNQF-SSKPGGWSANILDFRIKNLANTSVMSWGGRLLALWEGGKPYELDGKSLATFGESNLAGALKDGDNFTAHPRYDAANDRLVGFQYQPDPAADQTELTFWEFGRGGFEVLNCVKQTVPGFGFFHDFVVTKNYYVLSYAPTS---LSWKALLGVAAGFKSMGEAIEFNGDQPGRILMIPRDG-SEPII-VEVDSHFCFHFANGFED-EDGRVIIDMVRVDTLMLGDGSS-SSEPLWATADF-QTIPKSLLWRYEVSPA-GQWSRRQLSDRPLDFPSIAPRLSGRRHRFAYCAAVASTARAGPAQGLAKIDAEEGSASETWMPEPHQFLGESLFVPRCTPDAEAAKEDDGYVVGLLFDGRARRSELLVFDAQSVATGPICRVPLRGQLPHGLHGCWSSDLVPSKESV 530          
BLAST of NO03G03130 vs. NCBI_GenBank
Match: WP_045056891.1 (Apocarotenoid-15,15'-oxygenase [Aliterella atlantica] >KJH69723.1 Apocarotenoid-15,15'-oxygenase [Aliterella atlantica CENA595])

HSP 1 Score: 382.1 bits (980), Expect = 3.100e-102
Identity = 197/492 (40.04%), Postives = 294/492 (59.76%), Query Frame = 0
Query:   60 TWNYEGWIKGFETARTETSYEIKDIVEGSIPKDLTGTLFRNGHAKFDVEGLEIAHPFDGDGMISAVTFKDGRAFFRNRFVETEGYKREKQSKKIEYRGTFGTQKPGGWIRNIFDTRRKNVANTNVIFWGNRLLALWEGGLPHLMDPMTLQTFGESRLAKVLKSNQNLCAHPRYDPATDR------YVFFSTDPDPRKTKVTLYEFDRDFKLVAERSEDMEGFSLLHDMVITPSYYVFFKAPLTLQPLSWLLGLTGVASCIKFQDSQPAVAYLIPRSSPSKPMIPIPVDPHFSFHFSNAYDDASTGETVVDIIRVPKLYLTDTNGVTGNPIWKTVNYEQNVPKSTLWRYRLNPSLATHTKQELWSVYCDFPSIPVSRTGQQYRYTYLAAGRDPILPTPVGVVAKFDVEKGELVDAWTAEPNEFISETVVVPKDKGGKEGAAEDDVYLMTYVFNGDTCLSQILIFDAQSLGKGPLARLQLNSNIPLSLHGTWAP 546
            +++ + W KG+E+ + E  Y I D +EG IP +L GTLFRNG    D++G  I HPFDGDGMISA+ F +G+A+FRNRF+ T+ +  E+++ KI YRG FGTQKPGGW+ N FD R KN+ANTNVI+WG++LLALWE   PH +DP TL+T G+  L  VL   +   AHPR+D + ++       V FS  P    T +T++E +   +++ + +  + GF  +HD  ITP+Y +FF+ P+   P+ ++LGL G   CIKFQ +QP    +IPR +  +  I +     F FH +NA++    GE +     V  +       V  N  ++ V+++   P   LWR+ LN +  T T++ + S  C+FPS+   + G+ YR+ Y+AA        P+  + K D+E  E    WTA P  ++SE V V +      G +EDD +L+T V++ D   S ++I DA+ L +G +ARL L  +IP SLHG++AP
Sbjct:   17 SYDRQDWQKGYESVQQEEEYWI-DNIEGQIPPELVGTLFRNGPGLLDIKGHRIHHPFDGDGMISAIAFNNGKAYFRNRFIRTQAFLEEQKAGKILYRGVFGTQKPGGWLANAFDLRLKNIANTNVIYWGDKLLALWEAADPHRLDPHTLETLGKDSLNGVLADKEAFAAHPRFDHSCNQDNGAPCLVNFSIKPGLSST-ITIFELNPAGEVIRKHAHSVPGFCFIHDFAITPNYCIFFQNPIAFNPIPFVLGLRGAGECIKFQPNQPTRIIVIPRHAGKQVQI-LETHSGFVFHHANAFEQ---GEEIC----VDSICYESFPEVEANSDFRQVDFDALKP-GQLWRFHLNLAAQTVTRELIESRCCEFPSVHAEKVGRPYRHLYMAAADGATGNAPLQAILKIDLESQER-QLWTAAPRGYVSEPVFVAR----PGGESEDDGWLLTVVYDSDRHRSDVVILDARDLNQGAIARLHLKHHIPYSLHGSFAP 492          
BLAST of NO03G03130 vs. NCBI_GenBank
Match: OCQ99393.1 (Apocarotenoid-15,15'-oxygenase [Oscillatoriales cyanobacterium USR001])

HSP 1 Score: 382.1 bits (980), Expect = 3.100e-102
Identity = 200/496 (40.32%), Postives = 286/496 (57.66%), Query Frame = 0
Query:   60 TWNYEGWIKGFETARTETSYEIKDIVEGSIPKDLTGTLFRNGHAKFDVEGLEIAHPFDGDGMISAVTFKDGRAFFRNRFVETEGYKREKQSKKIEYRGTFGTQKPGGWIRNIFDTRRKNVANTNVIFWGNRLLALWEGGLPHLMDPMTLQTFGESRLAKVLKSNQNLCAHPRYDPA----TDRYVFFSTDPDPRKTKVTLYEFDRDFKLVAERSEDMEGFSLLHDMVITPSYYVFFKAPLTLQPLSWLLGLTGVASCIKFQDSQPAVAYLIPRSSPSKPMIPIPVDPHFSFHFSNAYDDASTGETVVDIIRVPKLYLTDTNGVTGNPIWKTVNYEQNVPKSTLWRYRLNPSLATHTKQELWSVYCDFPSIPVSRTGQQYRYTYLAAGRDPILPTPVGVVAKFDVEKGELVDAWTAEPNEFISETVVVPKDKGGKEGAAEDDVYLMTYVFNGDTCLSQILIFDAQSLGKGPLARLQLNSNIPLSLHGTWAPDAVYEG 552
            +++ + W +G+E+   E  Y I DI EG IP DL GT FRNG    +V G +I HPFDGDGM+ A+ F +GRA F N+FV TEGY  E+++ KI YRG FGTQKPGG+  NIFD + KN+ANTN+I+WG +LLALWE   P+ +DP TL+T G   L  VLK N+   AHPR +      +DR + F        T +T+YEFD D KL+   +    GF+ LHDM ITP+Y +FF+ PL   PL ++LGL G A C+KF  + P    LIPR+   + +  +   P F FH +NA+++   GE  VD I        ++        ++ +N++ +VP   LWR+RLN    T  K  + S  C+FP++P  R GQ YRY Y+          P+  + K D+   +    W+A P  F+ E V VP++       +EDD +L+  +++     S ++I DA  + KGP+ +L L  +IP  LHG++  D V+ G
Sbjct:   11 SYDRQDWERGYESQPQEYDYWIDDI-EGEIPPDLQGTFFRNGPGLLEVNGQKIHHPFDGDGMVCAIAFNNGRAHFCNKFVRTEGYIAEQKAGKILYRGVFGTQKPGGFFTNIFDLKLKNIANTNIIYWGGKLLALWEATAPYRLDPYTLETLGLDDLDGVLKPNEAFAAHPRIEKGKNGKSDRLINFGVKVGLSST-ITIYEFDTDGKLLHSHAHSFPGFAFLHDMAITPNYCIFFQNPLVFNPLLFILGLRGPAECLKFMPNHPTQVILIPRNGNQEEVKVLEAVPCFVFHHANAWEE--EGEIFVDSICYESFPTLESGS-----DFRELNFD-SVPAGELWRFRLNLQQETVEKDVIESRCCEFPALPPERVGQPYRYLYIGTANAESGNAPLQAILKIDLVSKDR-QIWSAAPRGFVGEPVFVPRN----SFKSEDDGWLLILMYDAVNHRSDVVILDALDISKGPVTKLHLKHHIPYGLHGSFVSDIVHRG 491          
The following BLAST results are available for this feature:
BLAST of NO03G03130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29728.17.000e-27279.55retinal pigment epithelial membrane protein [Nanno... [more]
WP_036533129.17.800e-10641.73Apocarotenoid-15,15'-oxygenase [Neosynechococcus s... [more]
WP_088893578.18.600e-10541.41Apocarotenoid-15,15'-oxygenase [Leptolyngbya ohadi... [more]
WP_024125526.15.600e-10442.13all-trans-8'-apo-beta-carotenal 15,15'-oxygenase D... [more]
WP_011055870.15.600e-10441.92lignostilbene alpha-beta-dioxygenase [Thermosynech... [more]
WP_015175906.18.100e-10340.36beta-carotene 15,15'-monooxygenase [Oscillatoria n... [more]
WP_071518340.11.100e-10239.33Apocarotenoid-15,15'-oxygenase [Geitlerinema sp. P... [more]
AMR99691.11.100e-10241.119-cis-epoxycarotenoid dioxygenase [Scrippsiella tr... [more]
WP_045056891.13.100e-10240.04Apocarotenoid-15,15'-oxygenase [Aliterella atlanti... [more]
OCQ99393.13.100e-10240.32Apocarotenoid-15,15'-oxygenase [Oscillatoriales cy... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005580NSK005580Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G03130.1NO03G03130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626834gene_1507Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100022g32gene882Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G03130.1NO03G03130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G03130 ID=NO03G03130|Name=NO03G03130|organism=Nannochloropsis oceanica|type=gene|length=2606bp
ATCCCTATCCGTACGTATAGCTGTAATGGTGAGGGGTTTGGCGCAATCGT
TTGCTTCATTTAGAAAGGAAGGGTGGGAATGGGAGTGTATGCAGCTAAGG
AGAGGGGAGGTCGACATGCGTGTTCCAACATTGGAAGCACCATTTTGTGG
ACGCGCTGCAGCATTTTTACTACCACCAAGTCCCGCTCCACCTCCTCCTA
TACAATACAGCCGCAAATCTAGCGCTTGAAGTGGGCTTATTTTCCTTCGT
AGGGTTCTCCGACCCCCCATCTCCTTTGCTTCGACAGATTGTGCGAGGAG
GTCGAACGCTAACTCGGCAGCCGCACTGTACGACCCAGCTGAAGCATCCC
CCATCACGCCCATCCACCCAATCACAGCACCATGGCACGTTATATGCTCA
TCCCAGCACTCTTGTTGGCCTTTTCGTCGAGTCTGGCCGACGGCTTTCGA
TTGCCCCGCCTTTTGGGAGCATCAGCATCGTCCCCTTCCCCCACAGCCCT
GGAGGCCACCACGGCCACCTCGACCCCGAACCCGCAAGACCTGGCTGGTA
CCACCGGCACATGGAACTATGAGGGCTGGATCAAAGGCTTTGAGACTGCG
CGCACGGAGACATCGTACGAGATCAAGGACATTGTGGAGGGCAGCATTCC
CAAGGATCTGACTGGCACCCTTTTCCGTAATGGCCACGCGAAGTTCGATG
TGGAGGGGTTAGAAATTGCTCACCCTTTCGACGGCGACGGAATGATAAGT
GCCGTGACTTTTAAGGACGGTCGGGCCTTTTTCCGCAACCGCTTTGTTGA
GACTGAGGGGTACAAGCGGGAGAAGCAGAGCAAAAAGATTGAATACCGTG
GCACATTTGGCACTCAAAAGCCGGGGGGATGGATCAGGAACATCTTTGAC
ACCCGCCGGAAAAATGTAGCGAATACAAATGTCATCTTTTGGGGAAATCG
CCTGCTGGCGTTGTGGGAGGGCGGGCTTCCGCATTTGATGGACCCAATGA
CCTTACAGACATTCGGAGAGTCCCGTCTCGCCAAGGTGTTGAAAAGCAAC
CAGAACCTGTGTGCCCACCCTCGGTACGACCCGGCCACGGACCGCTATGT
ATTTTTTTCGACTGACCCTGACCCGCGTAAGACCAAGGTGACCCTGTACG
AATTCGACAGGGATTTCAAgtgagtagaatggtgggaagggagagtagga
gagaggggaggtagcttacttcatgaatccgtaacgcatacctcacacag
agagactcattgtctcttccccccacccttaccgcagATTGGTCGCCGAA
CGTTCGGAGGACATGGAAGGTTTCTCCCTCCTCCACGACATGGTCATCAC
CCCCTCCTACTACGTCTTCTTCAAAGCCCCCCTCACCCTCCAGCCCCTGT
CCTGGCTCCTCGGCCTCACGGGCGTTGCCTCCTGTATCAAATTCCAGGAC
TCCCAACCCGCCGTCGCCTACCTCATTCCTCGCTCCTCTCCCTCCAAGCC
CATGATCCCCATCCCCGTCGATCCGCACTTCTCCTTCCACTTCTCCAACG
CCTACGACGACGCCTCCACCGGCGAGACTGTCGTTGATATCATCCGCGTC
CCCAAGCTCTACCTCACCGACACCAACGGCGTCACGGGCAATCCCATCTG
GAAAACTGTCAACTACGAGCAAAATGTTCCCAAATCGACCCTCTGGCGGT
ACAGGCTCAACCCCTCTCTCGCCACCCACACCAAGCAAGAGCTTTGGAGC
GTCTACTGTGACTTCCCCTCCATCCCTGTGTCCCGTACCGGCCAACAGTA
TCGATATACCTATCTCGCGGCTGGACGAGACCCTATTTTACCGACACCTG
TAGGGGTGGTGGCAAAATTCGACGTGGAGAAAGGAGAGTTGGTTGACGCC
TGGACAGCCGAGCCCAACGAATTTATCAGCGAGACAGTGGTGGTGCCGAA
GGACAAGGGCGGGAAAGAGGGAGCGGCGGAAGACGACGTATATCTGATGA
CATACGTCTTTAATGGCGATACTTGTTTGTCGCAGATCTTGATCTTTGAC
GCGCAGAGCTTGGGGAAAGGCCCGTTGGCGCGACTGCAGTTGAACTCCAA
TATCCCCTTGTCACTGCACGGGACGTGGGCGCCAGATGCGGTGTATGAGG
GAGAGGACATCCTGAGAAAATTCAAATGCTACTCGGGTGTATCCCGCTTC
GGTAAGATTGAGTCAGGCATGGCGCCAATTTTTGAATTCTAGGCCGTGAG
GAGGGATCAGAGGTCAGGCATGGCGCCGATTTTTGATTTTTGATTTCTAG
GTTGTGAGGAGGGATAAGAGGTGCCATTGTTAGTAGCTGGCTGGGGTGTG
TGTTGCTGTTGTTGCTGTTGTTGTTGGTGTCATTGTTGTTGTTGTACTTA
GAGAAAATATCTGGAAGTGATGTTTTACTTGGCACGACACGTCTTTCTTT
CTTGTAAAAAAGAGATATATGCGCGTGTGTGTGATAGAATATGCAAAAGC
GGAATTAGAGAGGAAGAGAGGACAGATGGCGAGAGAGGGGAATGAAGGAC
GATGTATCAGTAGGGGAAGGTAGTTAAAAAAAGCAAACAAGCAAATTTAT
TTTTTC
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protein sequence of NO03G03130.1

>NO03G03130.1-protein ID=NO03G03130.1-protein|Name=NO03G03130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=581bp
MARYMLIPALLLAFSSSLADGFRLPRLLGASASSPSPTALEATTATSTPN
PQDLAGTTGTWNYEGWIKGFETARTETSYEIKDIVEGSIPKDLTGTLFRN
GHAKFDVEGLEIAHPFDGDGMISAVTFKDGRAFFRNRFVETEGYKREKQS
KKIEYRGTFGTQKPGGWIRNIFDTRRKNVANTNVIFWGNRLLALWEGGLP
HLMDPMTLQTFGESRLAKVLKSNQNLCAHPRYDPATDRYVFFSTDPDPRK
TKVTLYEFDRDFKLVAERSEDMEGFSLLHDMVITPSYYVFFKAPLTLQPL
SWLLGLTGVASCIKFQDSQPAVAYLIPRSSPSKPMIPIPVDPHFSFHFSN
AYDDASTGETVVDIIRVPKLYLTDTNGVTGNPIWKTVNYEQNVPKSTLWR
YRLNPSLATHTKQELWSVYCDFPSIPVSRTGQQYRYTYLAAGRDPILPTP
VGVVAKFDVEKGELVDAWTAEPNEFISETVVVPKDKGGKEGAAEDDVYLM
TYVFNGDTCLSQILIFDAQSLGKGPLARLQLNSNIPLSLHGTWAPDAVYE
GEDILRKFKCYSGVSRFGKIESGMAPIFEF*
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Synonyms
Publications