NO03G03030, NO03G03030 (gene) Nannochloropsis oceanica

Overview
NameNO03G03030
Unique NameNO03G03030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1563
Alignment locationchr3:908646..910208 -

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Properties
Property NameValue
DescriptionRibosome production factor
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:908646..910208 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007109Brix
Homology
BLAST of NO03G03030 vs. NCBI_GenBank
Match: EWM29765.1 (ribosome production factor [Nannochloropsis gaditana])

HSP 1 Score: 537.3 bits (1383), Expect = 3.300e-149
Identity = 270/332 (81.33%), Postives = 295/332 (88.86%), Query Frame = 0
Query:    1 MVKRDVSSIKNKAKRREMYAKVKVEKKRDRKAERIKRQKEAQELGEEAPPKQVPRTLDNTREVDETVVHPEDEEVLADEAEDEFQAYFVGSQAAKILITTRPRPSRELFHFVGDLMQLIPNAFFYPRKSFEVKSICKHAEQGGFTHVFILSEKSKVCNGLLVSHLPHGPTAFFKVSNVVPGAKIQHHGQPTAHVPELILNNFNTRLGHRIGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYMFDEKKGSKPATAAIGGKKKKESGKGADAAALPMAGNIRARLQELGPRFTLKLRWLQEGTFDTQFGEYEWLHKRKEMDTTRRRFHL 333
            MVK++VS I+N+ KRRE++AKVK EKK+ +K+ER KRQ+EA ELG+EAPPKQVPRTL+NTREVDET+V P+D EV+ADEAEDEFQ YF G +  KILITTRPRPSRELFHFVGDLMQ+IPNAFFYPRKSFEVK+ICKHAE+GGFTHVFILSEK K CNGLLVSHLP GPT FFKVSNV PGAKI HHGQPTAHVPELILNNFNTRLGHR+GRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRY+FDEKK +K        KK K +G G+ A A   AG IRARLQELGPRFTLKLRWLQEGTFDT+FGEYEWLHKRKEMDTTRRRFHL
Sbjct:    1 MVKKEVSRIRNRCKRREVHAKVKAEKKKVKKSERTKRQREALELGDEAPPKQVPRTLENTREVDETIVQPDDLEVVADEAEDEFQPYFSGKETPKILITTRPRPSRELFHFVGDLMQVIPNAFFYPRKSFEVKAICKHAEEGGFTHVFILSEKYKACNGLLVSHLPCGPTVFFKVSNVTPGAKIAHHGQPTAHVPELILNNFNTRLGHRVGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYVFDEKK-AKSVPEINNPKKIKSAGDGSKAIA---AGGIRARLQELGPRFTLKLRWLQEGTFDTKFGEYEWLHKRKEMDTTRRRFHL 328          
BLAST of NO03G03030 vs. NCBI_GenBank
Match: CBN77056.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 392.9 bits (1008), Expect = 1.000e-105
Identity = 201/331 (60.73%), Postives = 235/331 (71.00%), Query Frame = 0
Query:    2 VKRDVSSIKNKAKRREMYAKVKVEKKRDRKAERIKRQKEAQELGEEAPPKQVPRTLDNTREVDETVVHPEDEEVLADEAEDEFQAYFVGSQAAKILITTRPRPSRELFHFVGDLMQLIPNAFFYPRKSFEVKSICKHAEQGGFTHVFILSEKSKVCNGLLVSHLPHGPTAFFKVSNVVPGAKIQHHGQPTAHVPELILNNFNTRLGHRIGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYMFDEKKGSKPATAAIGGKKKKESGKGADAAALPMAGNIRARLQELGPRFTLKLRWLQEGTFDTQFGEYEWLHKRKEMDTTRRRFHL 333
            +K  +  I NKAKR E+Y K K  K                      PPKQ P+TL++TR+ D TVV P D+EV  DEAEDEF  +F   Q  KI+ITTRPRPS  LFHFV DLM++IPNAFFYPRKSF VK IC+ A+   FTH+F++SE+ K+CNGL+VS LPHGPTAFFKVSNV+P  ++ +HG+ TAH PE+ILNNFNTRLGHR+GRFLGSFFPH PEF GRQVVTFHNQRD++FVR HRY+F E KG         G  KK                 RARLQELGPRFTLK+RWLQEGTFDTQ+GEYEW+HKRKEMD+TRR FHL
Sbjct:    1 MKTSLGHIGNKAKRTELYRKQKGNKXXXXXXXXXXXXXXXXXXXXXXPPKQKPKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFSNEQTPKIMITTRPRPSGNLFHFVQDLMRMIPNAFFYPRKSFTVKQICQWADNKKFTHLFVISERLKICNGLIVSVLPHGPTAFFKVSNVIPSTEVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPHEPEFNGRQVVTFHNQRDYIFVRFHRYIFAEGKGE--------GDTKK----------------TRARLQELGPRFTLKMRWLQEGTFDTQYGEYEWIHKRKEMDSTRRTFHL 307          
BLAST of NO03G03030 vs. NCBI_GenBank
Match: EJK58570.1 (hypothetical protein THAOC_21295 [Thalassiosira oceanica])

HSP 1 Score: 384.8 bits (987), Expect = 2.700e-103
Identity = 198/337 (58.75%), Postives = 236/337 (70.03%), Query Frame = 0
Query:    4 RDVSSIKNKAKRREMYAKVKVEKKRDRKAERIKRQKEAQELGEEAPPKQVPRTLDNTREVDETVVHPEDEEVLADEAEDEFQAYFVGSQAAKILITTRPRPSRELFHFVGDLMQLIPNAFFYPRKSFEVKSICKHAEQGGFTHVFILSEKSKVCNGLLVSHLP--------HGPTAFFKVSNVVPGAKIQHHGQPTAHVPELILNNFNTRLGHRIGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYMFDEKKGSKPATAAIGGKKKKESGKGADAAALPMAGNIRARLQELGPRFTLKLRWLQEGTFDTQFGEYEWLHKRKEMDTTRRRFHL 333
            R+   I NK KR EMY K  + KK  ++A RI R+K+A+ LGE+AP K  PRTLDNTRE + T V  +DEE++ADEAEDEF  YF      KIL+TTRP PS ELFHF+ DLM+ IP  ++YPRKS+ VK IC       FTHV +LSEKSKVCNG+L+SHL          GPTAFFK+SN +P   + ++G  T HVPEL L+ F TRLGHR GRFLGS FPH  +F+GRQV TFHNQRDF+FVRHHRY+F+E K +   T     K+KK                 +ARLQELGPRFT+K+RWLQEGTFDTQFGEYEW HKRKEMDTTRR+FHL
Sbjct:   31 RNPGHITNKLKRSEMYGKYLLAKKAQKRASRIAREKQAEALGEDAPAKPKPRTLDNTRESEVTTVKEDDEEIIADEAEDEFAPYFSDEIRPKILLTTRPCPSAELFHFIADLMRFIPQMYYYPRKSYSVKEICTFGSNRRFTHVIVLSEKSKVCNGMLISHLRPSTAANGLGGPTAFFKLSNYIPSTDVPNNGSATNHVPELNLHGFTTRLGHRAGRFLGSLFPHNAQFQGRQVATFHNQRDFIFVRHHRYIFEEGKDTSKET-----KEKK----------------TKARLQELGPRFTIKMRWLQEGTFDTQFGEYEWFHKRKEMDTTRRKFHL 346          
BLAST of NO03G03030 vs. NCBI_GenBank
Match: XP_002286727.1 (hypothetical protein THAPSDRAFT_31465 [Thalassiosira pseudonana CCMP1335] >EED96368.1 hypothetical protein THAPSDRAFT_31465 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 370.9 bits (951), Expect = 4.100e-99
Identity = 191/324 (58.95%), Postives = 226/324 (69.75%), Query Frame = 0
Query:   18 MYAKVKVEKKRDRKAERIKRQKEAQELGEEAP-PKQVPRTLDNTREVDETVVHPEDEEVLADEAEDEFQAYFVGSQAAKILITTRPRPSRELFHFVGDLMQLIPNAFFYPRKSFEVKSICKHAEQGGFTHVFILSEKSKVCNGLLVSHLP--------HGPTAFFKVSNVVPGAKIQHHGQPTAHVPELILNNFNTRLGHRIGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYMFDEKKGSKPATAAIGGKKKKESGKGADAAALPMAGNIRARLQELGPRFTLKLRWLQEGTFDTQFGEYEWLHKRKEMDTTRRRFHL 333
            MY K  +EKK  ++  RI+R+KEA+ LGE+A   KQ PRTLDNTRE + T V P+DEE++ADEAEDEF  YF      KIL+TTRP PS ELFHF+ DLM+  P  ++YPRKS+ VK IC       FTH+ +LSEKSKVCNG+L+SHL          GPTAFFKVSNV+P + + ++G  T HVPEL+LN F TRLGHR GRFLGS FPH  +F+GRQV TFHNQRDF+FVRHHRY        +       GKKK                  +ARLQELGPRFT+K+RWLQEGTFDTQFGEYEW HKRKEMDTTRR+FHL
Sbjct:    1 MYGKYLLEKKAKKRQTRIQREKEAEALGEDAEVKKQTPRTLDNTRESEVTTVQPDDEEIIADEAEDEFAPYFSDEIRPKILLTTRPCPSGELFHFISDLMRFFPQLYYYPRKSYSVKEICTFGSNRKFTHLIVLSEKSKVCNGMLISHLRPSTAANGLGGPTAFFKVSNVIPSSDVPNNGSATNHVPELVLNGFTTRLGHRAGRFLGSLFPHNAQFQGRQVATFHNQRDFIFVRHHRY--------EMICCLETGKKK-----------------TKARLQELGPRFTMKMRWLQEGTFDTQFGEYEWFHKRKEMDTTRRKFHL 299          
BLAST of NO03G03030 vs. NCBI_GenBank
Match: OQR92633.1 (ribosome production factor 1 [Achlya hypogyna])

HSP 1 Score: 369.0 bits (946), Expect = 1.500e-98
Identity = 186/332 (56.02%), Postives = 238/332 (71.69%), Query Frame = 0
Query:    1 MVKRDVSSIKNKAKRREMYAKVKVEKKRDRKAERIKRQKEAQELGEEAPPKQVPRTLDNTREVDETVVHPEDEEVLADEAEDEFQAYFVGSQAAKILITTRPRPSRELFHFVGDLMQLIPNAFFYPRKSFEVKSICKHAEQGGFTHVFILSEKSKVCNGLLVSHLPHGPTAFFKVSNVVPGAKIQHHGQPTAHVPELILNNFNTRLGHRIGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYMFDEKKGSKPATAAIGGKKKKESGKGADAAALPMAGNIRARLQELGPRFTLKLRWLQEGTFDTQFGEYEWLHKRKEMDTTRRRFHL 333
            +++++ S IKNK KR+++    K EKK  +K  +  R  EA+ELGE AP KQVPRT+DN RE + T++  ED+E+  D+ +DEF   F   Q  K+++TTRP PS E++ FV +LM+ IPN+F+Y RK++++K ICK A    FTHV ILSEK K CNG++VS LPHGPTAFFK+SNVV   KIQ+  + T+H PELILNNFNTRLGHRIGRFLGSFF H P+F+GRQVVTFHNQRDF+FVR HRY+F                   E+GK             +ARLQE+GPRFT+KLRWLQEGTFDT++GEYEW+HK+  MDT+RR+FHL
Sbjct:   28 ILRKNPSGIKNKIKRQQIMQLYKKEKKTMKKEAQAARXXEAEELGENAPAKQVPRTIDNAREAEVTMIGGEDDEIANDDMDDEFAKIFNNEQTPKLMLTTRPFPSGEMYPFVQNLMEFIPNSFYYDRKTYDIKDICKFASNKDFTHVCILSEKEKKCNGMVVSRLPHGPTAFFKISNVVLNNKIQNKAKRTSHQPELILNNFNTRLGHRIGRFLGSFFEHKPDFKGRQVVTFHNQRDFIFVRQHRYIF-------------------ENGK-------------KARLQEIGPRFTMKLRWLQEGTFDTKYGEYEWIHKQHSMDTSRRKFHL 327          
BLAST of NO03G03030 vs. NCBI_GenBank
Match: XP_002180567.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47975.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 365.9 bits (938), Expect = 1.300e-97
Identity = 192/322 (59.63%), Postives = 229/322 (71.12%), Query Frame = 0
Query:   18 MYAKVKVEKKRDRKAERIKRQKEAQELGEEAPPKQVPRTLDNTREVDETVVHPEDEEVLADEAEDEFQAYFVGSQAAKILITTRPRPSRELFHFVGDLMQLIPNAFFYPRKSFEVKSICKHAEQGGFTHVFILSEKSKVCNGLLVSHL-------PHGPTAFFKVSNVVPGAKIQHHGQPTAHVPELILNNFNTRLGHRIGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYMFDEKKGSKPATAAIGGKKKKESGKGADAAALPMAGNIRARLQELGPRFTLKLRWLQEGTFDTQFGEYEWLHKRKEMDTTRRRFHL 333
            MY K   +K+  ++  RI+R KEA+ LG++APPKQ P+T+DNTRE++ T+V  +D EV ADEAEDEF  YF G +  K+LITTRPRPS+ LFHF+ DL +LIP   FYPRKS+ VK IC  A    FTH+ +LSEKSKVCNGL +SHL         GPTAFFKVSNVV   KI +HG  T+H+PEL L+ F TRLGHRIGR LGS FPH  +F+GRQVVTFHNQRD++FVRHHRY+F E +G           K K+                   LQELGPRFTLKLRW+QEGTFDTQFGEYEW+HKRKEMDTTRR+FHL
Sbjct:    1 MYGKYLQQKRAAKQESRIQRHKEAEALGDDAPPKQAPKTIDNTRELEPTMV-LQDPEVAADEAEDEFAPYFNG-EKPKVLITTRPRPSQNLFHFIADLQKLIPALHFYPRKSYSVKEICSFAANREFTHLIVLSEKSKVCNGLTLSHLRMHDGVAKAGPTAFFKVSNVVTSKKIPNHGASTSHIPELNLHGFGTRLGHRIGRLLGSVFPHDAQFQGRQVVTFHNQRDYIFVRHHRYIFRELEG-----------KAKD-------------------LQELGPRFTLKLRWIQEGTFDTQFGEYEWIHKRKEMDTTRRKFHL 290          
BLAST of NO03G03030 vs. NCBI_GenBank
Match: XP_012205931.1 (hypothetical protein SPRG_11539 [Saprolegnia parasitica CBS 223.65] >KDO23445.1 hypothetical protein SPRG_11539 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 359.8 bits (922), Expect = 9.300e-96
Identity = 181/332 (54.52%), Postives = 238/332 (71.69%), Query Frame = 0
Query:    1 MVKRDVSSIKNKAKRREMYAKVKVEKKRDRKAERIKRQKEAQELGEEAPPKQVPRTLDNTREVDETVVHPEDEEVLADEAEDEFQAYFVGSQAAKILITTRPRPSRELFHFVGDLMQLIPNAFFYPRKSFEVKSICKHAEQGGFTHVFILSEKSKVCNGLLVSHLPHGPTAFFKVSNVVPGAKIQHHGQPTAHVPELILNNFNTRLGHRIGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYMFDEKKGSKPATAAIGGKKKKESGKGADAAALPMAGNIRARLQELGPRFTLKLRWLQEGTFDTQFGEYEWLHKRKEMDTTRRRFHL 333
            +++++ S IKNK KR+++    K EKK  +K  +     EA+ELG++AP KQVPRT+DN RE + T++  +D+E+ AD+ +DEF   F   +  K++ITTRP PS +++ FV +LM+ IPN+F+Y RK++++K IC+ A    FTHV ILSEK K  NG++VS LPHGPTAFFK+SNVV   KIQ+  + T+H PELILNNFNTRLGHRIGRFLGSFF H P+F+GRQVVTFHNQRDF+FVR HRY+F                   E+GK             +ARLQE+GPRFT+KLRWLQEGTFDT++GEYEW+HK+  MDT+RR+FHL
Sbjct:   39 ILRKNPSGIKNKIKRQQVMQLYKKEKKTMKKEAQXXXXXEAEELGDKAPAKQVPRTIDNAREAEVTMIGGDDDEIAADDQDDEFARIFGNEETPKLMITTRPFPSGDMYPFVQNLMEFIPNSFYYDRKTYDIKDICRFAGNKAFTHVCILSEKEKKVNGMVVSRLPHGPTAFFKISNVVLNNKIQNKAKRTSHQPELILNNFNTRLGHRIGRFLGSFFEHKPDFKGRQVVTFHNQRDFIFVRQHRYIF-------------------ENGK-------------KARLQEIGPRFTMKLRWLQEGTFDTKYGEYEWIHKQHAMDTSRRKFHL 338          
BLAST of NO03G03030 vs. NCBI_GenBank
Match: XP_008868750.1 (hypothetical protein H310_05718 [Aphanomyces invadans] >ETW02145.1 hypothetical protein H310_05718 [Aphanomyces invadans])

HSP 1 Score: 357.8 bits (917), Expect = 3.500e-95
Identity = 179/331 (54.08%), Postives = 240/331 (72.51%), Query Frame = 0
Query:    2 VKRDVSSIKNKAKRREMYAKVKVEKKRDRKAERIKRQKEAQELGEEAPPKQVPRTLDNTREVDETVVHPEDEEVLADEAEDEFQAYFVGSQAAKILITTRPRPSRELFHFVGDLMQLIPNAFFYPRKSFEVKSICKHAEQGGFTHVFILSEKSKVCNGLLVSHLPHGPTAFFKVSNVVPGAKIQHHGQPTAHVPELILNNFNTRLGHRIGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYMFDEKKGSKPATAAIGGKKKKESGKGADAAALPMAGNIRARLQELGPRFTLKLRWLQEGTFDTQFGEYEWLHKRKEMDTTRRRFHL 333
            ++++ S+IKNK KR+++  + K EK+  ++ +R  R++EA+ELG++AP K  PRT+DN RE + T++  +DEE++ D+ +DEF + F   +  KI+ TTRP PS +++ FV +LM+ +PN+F+Y R ++++K ICK A    FTHV ILSEK KV NGL++S LPHGPTAFFKVSNVV   KI +H + T+H PE+ILNNFNTRLGHRIGRFLGSFF H P+F GRQVVTFHNQRD++FVR HRY+F                   E+GK             +ARLQE+GP+FTLKLRWLQEGTFDT+FGEYEW+HK+  MDT+RR+FHL
Sbjct:   41 LRKNPSAIKNKMKRQQVMVEYKKEKRAIKEEKRAARKREAEELGDKAPAKLEPRTIDNAREAEVTMISADDEEIVGDDHDDEFASIFAAEETPKIMWTTRPFPSADMYPFVQNLMEFVPNSFYYKRGTYDIKDICKFAGNKEFTHVGILSEKEKVVNGLVISRLPHGPTAFFKVSNVVLMDKIVNHARKTSHQPEVILNNFNTRLGHRIGRFLGSFFEHKPDFIGRQVVTFHNQRDYIFVRQHRYVF-------------------ENGK-------------KARLQEIGPKFTLKLRWLQEGTFDTKFGEYEWIHKQHAMDTSRRKFHL 339          
BLAST of NO03G03030 vs. NCBI_GenBank
Match: XP_008611126.1 (hypothetical protein SDRG_07088 [Saprolegnia diclina VS20] >EQC35376.1 hypothetical protein SDRG_07088 [Saprolegnia diclina VS20])

HSP 1 Score: 355.1 bits (910), Expect = 2.300e-94
Identity = 179/332 (53.92%), Postives = 236/332 (71.08%), Query Frame = 0
Query:    1 MVKRDVSSIKNKAKRREMYAKVKVEKKRDRKAERIKRQKEAQELGEEAPPKQVPRTLDNTREVDETVVHPEDEEVLADEAEDEFQAYFVGSQAAKILITTRPRPSRELFHFVGDLMQLIPNAFFYPRKSFEVKSICKHAEQGGFTHVFILSEKSKVCNGLLVSHLPHGPTAFFKVSNVVPGAKIQHHGQPTAHVPELILNNFNTRLGHRIGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYMFDEKKGSKPATAAIGGKKKKESGKGADAAALPMAGNIRARLQELGPRFTLKLRWLQEGTFDTQFGEYEWLHKRKEMDTTRRRFHL 333
            +++++ S IKNK KR+++    K EKK  +K        EA+ELG++AP KQ PRT+DN RE + T++  +D+E+ AD+ +DEF   F   +  K++ITTRP PS +++ FV +LM+ IPN+F+Y RK++++K IC+ A    FTHV ILSEK K  NG++VS LPHGPTAFFK+SNVV   +IQ+  + T+H PELILNNFNTRLGHRIGRFLGSFF H P+F+GRQVVTFHNQRDF+FVR HRY+F                   E+GK             +ARLQE+GPRFT+KLRWLQEGTFDT++GEYEW+HK+  MDT+RR+FHL
Sbjct:   39 ILRKNPSGIKNKIKRQQVMQLYKKEKKTMKKXXXXXXXXEAEELGDKAPAKQEPRTIDNAREAEVTMIGGDDDEIAADDHDDEFARIFGNEETPKLMITTRPFPSGDMYPFVQNLMEFIPNSFYYDRKTYDIKDICRFAGNKAFTHVCILSEKEKKVNGMVVSRLPHGPTAFFKISNVVLNKQIQNKAKRTSHQPELILNNFNTRLGHRIGRFLGSFFEHKPDFKGRQVVTFHNQRDFIFVRQHRYIF-------------------ENGK-------------KARLQEIGPRFTMKLRWLQEGTFDTKYGEYEWIHKQHAMDTSRRKFHL 338          
BLAST of NO03G03030 vs. NCBI_GenBank
Match: XP_009833810.1 (hypothetical protein H257_09333 [Aphanomyces astaci] >ETV76898.1 hypothetical protein H257_09333 [Aphanomyces astaci])

HSP 1 Score: 355.1 bits (910), Expect = 2.300e-94
Identity = 179/331 (54.08%), Postives = 235/331 (71.00%), Query Frame = 0
Query:    2 VKRDVSSIKNKAKRREMYAKVKVEKKRDRKAERIKRQKEAQELGEEAPPKQVPRTLDNTREVDETVVHPEDEEVLADEAEDEFQAYFVGSQAAKILITTRPRPSRELFHFVGDLMQLIPNAFFYPRKSFEVKSICKHAEQGGFTHVFILSEKSKVCNGLLVSHLPHGPTAFFKVSNVVPGAKIQHHGQPTAHVPELILNNFNTRLGHRIGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYMFDEKKGSKPATAAIGGKKKKESGKGADAAALPMAGNIRARLQELGPRFTLKLRWLQEGTFDTQFGEYEWLHKRKEMDTTRRRFHL 333
            ++++ S+IKNK KR+++  + K EK+           KEA+ELG++AP K  PRT+DNTRE + T++  EDEE++ DE +DEF + F   +  KI+ TTRP PS +L+ FV +LM+ +PN+F+Y R ++++K ICK A    FTHV ILSEK K CNGL++S LPHGPTA+FK+SNVV   KI +H + T+H PE+ILNNFNTRLGHRIGRFLGSFF H P+F GRQVVTFHNQRDF+FVR HRY+F                   E+GK             +ARLQE+GP+FTLKLRWLQ+GTFDT++GEYEW+HK+  MDT+RR+FHL
Sbjct:   65 LRKNPSAIKNKMKRQQVMVEYKKEKRAIXXXXXXXXXKEAEELGDKAPAKLEPRTIDNTREPEVTMISAEDEEIVGDEQDDEFASIFAAEETPKIMWTTRPFPSADLYPFVQNLMEFVPNSFYYKRGTYDIKDICKFAGNKEFTHVGILSEKEKTCNGLVISRLPHGPTAYFKISNVVLMDKIVNHARKTSHQPEVILNNFNTRLGHRIGRFLGSFFEHKPDFVGRQVVTFHNQRDFVFVRQHRYVF-------------------ENGK-------------KARLQEIGPKFTLKLRWLQDGTFDTKYGEYEWIHKQHSMDTSRRKFHL 363          
The following BLAST results are available for this feature:
BLAST of NO03G03030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29765.13.300e-14981.33ribosome production factor [Nannochloropsis gadita... [more]
CBN77056.11.000e-10560.73conserved unknown protein [Ectocarpus siliculosus][more]
EJK58570.12.700e-10358.75hypothetical protein THAOC_21295 [Thalassiosira oc... [more]
XP_002286727.14.100e-9958.95hypothetical protein THAPSDRAFT_31465 [Thalassiosi... [more]
OQR92633.11.500e-9856.02ribosome production factor 1 [Achlya hypogyna][more]
XP_002180567.11.300e-9759.63predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_012205931.19.300e-9654.52hypothetical protein SPRG_11539 [Saprolegnia paras... [more]
XP_008868750.13.500e-9554.08hypothetical protein H310_05718 [Aphanomyces invad... [more]
XP_008611126.12.300e-9453.92hypothetical protein SDRG_07088 [Saprolegnia dicli... [more]
XP_009833810.12.300e-9454.08hypothetical protein H257_09333 [Aphanomyces astac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005593NSK005593Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G03030.1NO03G03030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572408gene_1496Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100022g44gene893Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G03030.1NO03G03030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G03030 ID=NO03G03030|Name=NO03G03030|organism=Nannochloropsis oceanica|type=gene|length=1563bp
CCACAGGAAAACTGCTGGCACCGGCCCGTCTGCTTAGCCTCCCACCAGTT
TCCGAGTATCTTGCAACAAACTTTTTGACCCGCTTGCCCTAAGCAGAAAA
TGGTGAAGCGGGATGTGTCTTCGATCAAAAACAAGGCGAAGCGCCGGGAG
ATGTACGCTAAGGTTAAGGTCGAGAAGAAGAGAGATAGGAAGGCGGAGCG
CATCAAGCGACAGAAGGAGGCGCAGGAGCTGGGAGAGGAGGCACCACCCA
AACAGgtactctttgatttggagtggaaagagggctaggattgagattta
tgaatgtggagggggaaggaagaggaagacatctattttggtgccttacg
cgtcttggggctgtcgcagatgtcccatatttgttttttgcatccctcgt
gcggggcggaaagctacggaatggagaggttggattaccaagtccagcca
tgtgttaacttgcctgcatacttatctattggactcctcgtgaaatgtct
ttgcttatattcacatccttgcaaggagaggctgcaacttgaaatcatta
aaatctgttagacccgtccgggagggaaagcaaagatagtgtaagcgcca
caaccagacagtcaaaactcacaaccccctcccccatccaccccttccgg
catatcaagGTACCCCGCACATTGGACAACACCCGAGAAGTAGACGAGAC
AGTGGTACATCCTGAGGACGAAGAGGTCTTGGCCGACGAAGCAGAAGATG
AATTTCAAGCTTACTTCGTGGGCAGTCAAGCGGCAAAGATTCTCATTACT
ACCCGCCCCCGCCCTTCCCGGGAGCTCTTTCATTTTGTTGGCGACCTCAT
GCAATTGATCCCCAACGCATTTTTCTATCCCCGGAAAAGTTTCGAGGTCA
AGTCCATTTGCAAGCACGCCGAGCAAGGTGGATTCACGCACGTCTTTATC
CTCAGCGAGAAATCTAAAGTCTGTAACGGCCTTCTCGTCTCCCACCTTCC
CCATGGGCCCACCGCCTTCTTCAAGGTTTCCAATGTCGTGCCTGGCGCCA
AGATCCAGCACCATGGCCAGCCCACAGCCCATGTTCCTGAACTCATCCTC
AACAATTTCAACACTCGCCTGGGCCACCGTATCGGCCGGTTTCTTGGCTC
TTTCTTCCCGCACGCACCCGAGTTTCGTGGCCGTCAAGTGGTGACGTTTC
ATAATCAACGAGACTTTCTGTTTGTGCGACATCACCGGTACATGTTTGAC
GAGAAGAAAGGTTCCAAGCCCGCGACTGCTGCCATCGGGGGAAAGAAGAA
GAAGGAGTCCGGTAAGGGGGCGGATGCCGCGGCCCTCCCCATGGCGGGCA
ATATTCGGGCCCGACTTCAGGAATTGGGTCCGCGCTTCACCCTCAAGCTA
AGATGGTTGCAAGAAGGCACGTTTGACACCCAGTTTGGAGAGTACGAATG
GCTGCATAAGCGGAAGGAGATGGACACGACCCGGCGTCGTTTCCACTTGT
AATTTTTTAGGAGAAAAGGGCCAAAAGATCAAAAAGTAACACCTATTTAA
ATTTCTTGAATGA
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protein sequence of NO03G03030.1

>NO03G03030.1-protein ID=NO03G03030.1-protein|Name=NO03G03030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bp
MVKRDVSSIKNKAKRREMYAKVKVEKKRDRKAERIKRQKEAQELGEEAPP
KQVPRTLDNTREVDETVVHPEDEEVLADEAEDEFQAYFVGSQAAKILITT
RPRPSRELFHFVGDLMQLIPNAFFYPRKSFEVKSICKHAEQGGFTHVFIL
SEKSKVCNGLLVSHLPHGPTAFFKVSNVVPGAKIQHHGQPTAHVPELILN
NFNTRLGHRIGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYMFDE
KKGSKPATAAIGGKKKKESGKGADAAALPMAGNIRARLQELGPRFTLKLR
WLQEGTFDTQFGEYEWLHKRKEMDTTRRRFHL*
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Synonyms
Publications