NO03G02750, NO03G02750 (gene) Nannochloropsis oceanica

Overview
NameNO03G02750
Unique NameNO03G02750
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2673
Alignment locationchr3:780026..782698 -

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Properties
Property NameValue
DescriptionPantoate--beta-alanine ligase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:780026..782698 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004592pantoate-beta-alanine ligase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0015940pantothenate biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR003721Pantoate_ligase
Homology
BLAST of NO03G02750 vs. NCBI_GenBank
Match: EWM29713.1 (pantoate--beta-alanine ligase [Nannochloropsis gaditana])

HSP 1 Score: 283.1 bits (723), Expect = 1.000e-72
Identity = 137/188 (72.87%), Postives = 166/188 (88.30%), Query Frame = 0
Query:  121 MYPSSHRCYVVPDGFDHLAEGNARPGHFRGVATIVTKLFGMVQPTKAYFGQKDAMQCVLVRRLVEDLNLLPKIVVCPTIREDDGLAMSSRNAYLGEQERQAAPVVYRALQVAQKAFKNSQEPMEAAKLREIIRTIFAKEPLVESVEYVSVARKDTMEEIMEKVEPGEGAIISLALRLGKVRLIDNIIL 309
            MY  SHRCYVVP+GF+HLAEG +RPGHF+GVATIVTKLFG+VQPTKAYFGQKDAMQCVL+RRLVEDLNL P IVVC T+RE DGLAMSSRNAYL + ER AAPVVY++L+ A++AF NS+  + AA+LR+I+R + A+E L+ +VEYVSVARKDTMEE+ + V+P EGA+ISLA+RLGKVRLIDN+I+
Sbjct:    1 MYTPSHRCYVVPEGFEHLAEGKSRPGHFKGVATIVTKLFGIVQPTKAYFGQKDAMQCVLMRRLVEDLNLPPAIVVCDTVREKDGLAMSSRNAYLSQHERSAAPVVYKSLRAAEQAFCNSETSISAAELRKIVRDVLAREELIHTVEYVSVARKDTMEELEDIVQPNEGAVISLAVRLGKVRLIDNVII 188          
BLAST of NO03G02750 vs. NCBI_GenBank
Match: GAX18995.1 (pantoate--beta-alanine ligase [Fistulifera solaris])

HSP 1 Score: 270.0 bits (689), Expect = 9.000e-69
Identity = 141/283 (49.82%), Postives = 186/283 (65.72%), Query Frame = 0
Query:   26 LPTTKRARKENDYLIISVFVNPTQFGPNEDFDMYPRQLERDVEMAKDTGKKIYILRSSLSRLLADKCRNVLVIRFHPLFSSCSGVDFIFAPMVADMYPSSHRCYVVPDGFDHLAEGNARPGHFRGVATIVTKLFGMVQPTKAYFGQKDAMQCVLVRRLVEDLNLLPKIVVCPTIREDDGLAMSSRNAYLGEQERQAAPVVYRALQVAQKAFKNSQEPMEAAKLREIIRTIFAKEPLVESVEYVSVARKDTMEEIMEKVEPGEGAIISLALRLGKVRLIDNIIL 309
            L   ++AR END ++ S+FVNPTQFGPNEDF+ YPRQL+ D                      +DK              +  GVD++FAP V DMY   H  YV P+GFD  +EG +RPGHFRGVATIVTKLF +VQPT AYFGQKDA QCVL+RR+V+DLN+   ++V  T+RE DGLAMSSRN YL   ER+AAP+VY++L  A+     S+  +E+A +RE + ++   EPL+  ++YVS+  K TM+  +E+V   +GA+ISLA +LG VRLIDNII+
Sbjct:   42 LTLVRQARAENDVVVASIFVNPTQFGPNEDFEKYPRQLQID----------------------SDKL-------------AALGVDYLFAPSVNDMYGKDHVTYVDPEGFDDTSEGKSRPGHFRGVATIVTKLFNIVQPTNAYFGQKDAAQCVLIRRIVDDLNMDVNVIVADTVRESDGLAMSSRNTYLTPTERRAAPIVYQSLCAARTLVLASESAVESAVVRETVESVLRSEPLISEIQYVSIDNKSTMQS-LEQVNREDGALISLACKLGSVRLIDNIII 288          
BLAST of NO03G02750 vs. NCBI_GenBank
Match: GAX15483.1 (pantoate--beta-alanine ligase [Fistulifera solaris])

HSP 1 Score: 269.6 bits (688), Expect = 1.200e-68
Identity = 142/283 (50.18%), Postives = 185/283 (65.37%), Query Frame = 0
Query:   26 LPTTKRARKENDYLIISVFVNPTQFGPNEDFDMYPRQLERDVEMAKDTGKKIYILRSSLSRLLADKCRNVLVIRFHPLFSSCSGVDFIFAPMVADMYPSSHRCYVVPDGFDHLAEGNARPGHFRGVATIVTKLFGMVQPTKAYFGQKDAMQCVLVRRLVEDLNLLPKIVVCPTIREDDGLAMSSRNAYLGEQERQAAPVVYRALQVAQKAFKNSQEPMEAAKLREIIRTIFAKEPLVESVEYVSVARKDTMEEIMEKVEPGEGAIISLALRLGKVRLIDNIIL 309
            L   ++AR END ++ S+FVNPTQFGPNEDFD YPRQL+ D                      +DK              +  GVD++FAP V DMY   H  YV P+GFD  +EG ARPGHFRGVATIVTKLF +VQPT AYFGQKDA QCVL+RR+V+DLN+   ++V  T+RE DGLAMSSRN YL   ER AAP+VY++L  A+     S   +E+A +R+ + ++   EPL+ +++YVS+  K TM+  +E+V   +GA+ISLA +LG VRLIDNII+
Sbjct:    9 LTLVRQARAENDVVVASIFVNPTQFGPNEDFDKYPRQLQID----------------------SDKL-------------AALGVDYLFAPSVNDMYGKDHVTYVDPEGFDDTSEGKARPGHFRGVATIVTKLFNIVQPTNAYFGQKDAAQCVLIRRIVDDLNMDVNVIVAETVRESDGLAMSSRNTYLTPTERHAAPIVYQSLCAARTLVLASNVAVESAVVRKTVESVLRSEPLISAIQYVSIDNKSTMQS-LEQVNREDGALISLACKLGSVRLIDNIII 255          
BLAST of NO03G02750 vs. NCBI_GenBank
Match: GAY05274.1 (Pantoate-beta alanine ligase, partial [Pythium insidiosum])

HSP 1 Score: 258.8 bits (660), Expect = 2.100e-65
Identity = 137/284 (48.24%), Postives = 180/284 (63.38%), Query Frame = 0
Query:   26 LPTTKRARKENDYLIISVFVNPTQFGPNEDFDMYPRQLERDVEMAKDTGKKIYILRSSLSRLLADKCRNVLVIRFHPLFSSCSGVDFIFAPMVADMYPSSHRCYVVPDGFDHLAEGNARPGHFRGVATIVTKLFGMVQPTKAYFGQKDAMQCVLVRRLVEDLNLLPKIVVCPTIREDDGLAMSSRNAYLGEQERQAAPVVYRALQVAQKAF-KNSQEPMEAAKLREIIRTIFAKEPLVESVEYVSVARKDTMEEIMEKVEPGEGAIISLALRLGKVRLIDNIIL 309
            L   + A+++ D +  SVFVNPTQFGPNED+  YPR  + D+           +LRS                          GVD++F P    MY   HRCYV P+GFD L EG  RPGHFRGVAT+VTKLF +VQPT A+FGQKDA QCVL++RLVEDLN+  ++ V P  RE DGLA+S+RN YL ++ER AAP VYR L++A++ F   +   + A  +R IIR  +  EPL++ ++Y+S+  K+TMEEI E++   EGAIIS+AL+LG  RLID I L
Sbjct:    9 LSLVRAAKQKCDVVAASVFVNPTQFGPNEDYSKYPRTFDSDMA----------LLRS-------------------------EGVDYVFVPSADAMYSKHHRCYVTPEGFDDLPEGRCRPGHFRGVATVVTKLFNVVQPTHAFFGQKDAAQCVLIKRLVEDLNMDIQVEVVPVCREQDGLALSTRNQYLSKEERAAAPAVYRGLRIAKEQFAAQADATVSAESIRSIIRDEYEAEPLIKEIQYISIGSKETMEEI-EEIRTDEGAIISVALKLGNCRLIDTITL 256          
BLAST of NO03G02750 vs. NCBI_GenBank
Match: XP_008901816.1 (pantoate-beta-alanine ligase [Phytophthora parasitica INRA-310] >ETI52304.1 pantoate-beta-alanine ligase [Phytophthora parasitica P1569] >ETK92190.1 pantoate-beta-alanine ligase [Phytophthora parasitica] >ETL45566.1 pantoate-beta-alanine ligase [Phytophthora parasitica] >ETM51908.1 pantoate-beta-alanine ligase [Phytophthora parasitica] >ETN12790.1 pantoate-beta-alanine ligase [Phytophthora parasitica INRA-310] >ETO81071.1 pantoate-beta-alanine ligase [Phytophthora parasitica P1976] >ETP22107.1 pantoate-beta-alanine ligase [Phytophthora parasitica CJ01A1] >ETP50002.1 pantoate-beta-alanine ligase [Phytophthora parasitica P10297])

HSP 1 Score: 250.0 bits (637), Expect = 9.700e-63
Identity = 133/283 (47.00%), Postives = 177/283 (62.54%), Query Frame = 0
Query:   30 KRARKENDYLIISVFVNPTQFGPNEDFDMYPRQLERDVEMAKDTGKKIYILRSSLSRLLADKCRNVLVIRFHPLFSSCSGVDFIFAPMVADMYPSSHRCYVVPDGFDHLAEGNARPGHFRGVATIVTKLFGMVQPTKAYFGQKDAMQCVLVRRLVEDLNLLPKIVVCPTIREDDGLAMSSRNAYLGEQERQAAPVVYRAL----QVAQKAFKNSQEPMEAAKLREIIRTIFAKEPLVESVEYVSVARKDTMEEIMEKVEPGEGAIISLALRLGKVRLIDNIIL 309
            K+AR   D++  S+FVNP QFGPNED+  YPR  E+DV + K+                                    GVD +F P   +MY   H CYV P+GFD L EG  R GHFRGVAT+VTKLF +VQPT A+FGQKDA Q VL++R+V DLN+  +I V P +RE DGLA+S+RN YL   ER+AA V++R L     + QKA K+ +  ++A  LR+ +R  + +EPLV ++EYVSV  K TM+E M  V+  EGAI+S+A++LG+ RLIDNI+L
Sbjct:   68 KQARSSCDFVAASIFVNPAQFGPNEDYSKYPRTFEKDVALLKE-----------------------------------QGVDLVFFPSADEMYSPYHSCYVDPEGFDDLVEGQCRKGHFRGVATVVTKLFNIVQPTHAFFGQKDAAQVVLIKRMVSDLNIPVQIEVMPIVREADGLALSTRNQYLSSVERKAASVLHRGLVHAQDLFQKAKKDGKSIVDAVSLRDAVREEYEREPLVTAIEYVSVGSKQTMQE-MSAVDTAEGAIVSVAVKLGQCRLIDNIVL 314          
BLAST of NO03G02750 vs. NCBI_GenBank
Match: ETL98750.1 (pantoate-beta-alanine ligase [Phytophthora parasitica])

HSP 1 Score: 250.0 bits (637), Expect = 9.700e-63
Identity = 133/283 (47.00%), Postives = 177/283 (62.54%), Query Frame = 0
Query:   30 KRARKENDYLIISVFVNPTQFGPNEDFDMYPRQLERDVEMAKDTGKKIYILRSSLSRLLADKCRNVLVIRFHPLFSSCSGVDFIFAPMVADMYPSSHRCYVVPDGFDHLAEGNARPGHFRGVATIVTKLFGMVQPTKAYFGQKDAMQCVLVRRLVEDLNLLPKIVVCPTIREDDGLAMSSRNAYLGEQERQAAPVVYRAL----QVAQKAFKNSQEPMEAAKLREIIRTIFAKEPLVESVEYVSVARKDTMEEIMEKVEPGEGAIISLALRLGKVRLIDNIIL 309
            K+AR   D++  S+FVNP QFGPNED+  YPR  E+DV + K+                                    GVD +F P   +MY   H CYV P+GFD L EG  R GHFRGVAT+VTKLF +VQPT A+FGQKDA Q VL++R+V DLN+  +I V P +RE DGLA+S+RN YL   ER+AA V++R L     + QKA K+ +  ++A  LR+ +R  + +EPLV ++EYVSV  K TM+E M  V+  EGAI+S+A++LG+ RLIDNI+L
Sbjct:   68 KQARSSCDFVAASIFVNPAQFGPNEDYSKYPRTFEKDVALLKE-----------------------------------QGVDLVFFPSADEMYSPYHSCYVDPEGFDDLVEGQCRKGHFRGVATVVTKLFNIVQPTHAFFGQKDAAQVVLIKRMVSDLNIPVQIEVVPIVREADGLALSTRNQYLSSVERKAASVLHRGLVHAQDLFQKAKKDGKSIVDAVSLRDAVREEYEREPLVTAIEYVSVGSKQTMQE-MSAVDTAEGAIVSVAVKLGQCRLIDNIVL 314          
BLAST of NO03G02750 vs. NCBI_GenBank
Match: KUF91793.1 (hypothetical protein AM588_10007212 [Phytophthora nicotianae] >KUF97572.1 Pantothenate synthetase [Phytophthora nicotianae])

HSP 1 Score: 250.0 bits (637), Expect = 9.700e-63
Identity = 133/283 (47.00%), Postives = 177/283 (62.54%), Query Frame = 0
Query:   30 KRARKENDYLIISVFVNPTQFGPNEDFDMYPRQLERDVEMAKDTGKKIYILRSSLSRLLADKCRNVLVIRFHPLFSSCSGVDFIFAPMVADMYPSSHRCYVVPDGFDHLAEGNARPGHFRGVATIVTKLFGMVQPTKAYFGQKDAMQCVLVRRLVEDLNLLPKIVVCPTIREDDGLAMSSRNAYLGEQERQAAPVVYRAL----QVAQKAFKNSQEPMEAAKLREIIRTIFAKEPLVESVEYVSVARKDTMEEIMEKVEPGEGAIISLALRLGKVRLIDNIIL 309
            K+AR   D++  S+FVNP QFGPNED+  YPR  E+DV + K+                                    GVD +F P   +MY   H CYV P+GFD L EG  R GHFRGVAT+VTKLF +VQPT A+FGQKDA Q VL++R+V DLN+  +I V P +RE DGLA+S+RN YL   ER+AA V++R L     + QKA K+ +  ++A  LR+ +R  + +EPLV ++EYVSV  K TM+E M  V+  EGAI+S+A++LG+ RLIDNI+L
Sbjct:   13 KQARSSCDFVAASIFVNPAQFGPNEDYSKYPRTFEKDVALLKE-----------------------------------QGVDLVFFPSADEMYSPYHSCYVDPEGFDDLVEGQCRKGHFRGVATVVTKLFNIVQPTHAFFGQKDAAQVVLIKRMVSDLNIPVQIEVMPIVREADGLALSTRNQYLSSVERKAASVLHRGLVHAQDLFQKAKKDGKSIVDAVSLRDAVREEYEREPLVTAIEYVSVGSKQTMQE-MSAVDTAEGAIVSVAVKLGQCRLIDNIVL 259          
BLAST of NO03G02750 vs. NCBI_GenBank
Match: XP_002293135.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED89596.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 247.3 bits (630), Expect = 6.300e-62
Identity = 139/287 (48.43%), Postives = 180/287 (62.72%), Query Frame = 0
Query:   26 LPTTKRARKENDYLIISVFVNPTQFGPNEDFDMYPRQLERDVEMAKDTGKKIYILRSSLSRLLADKCRNVLVIRFHPLFSSCSGVDFIFAPMVADMYPSSHRCYVVPDGFDHLAEGNARPGHFRGVATIVTKLFGMVQPTKAYFGQKDAMQCVLVRRLVEDLNLLPKIVVCPTIREDDGLAMSSRNAYLGEQERQAAPVVYRALQVAQKAFKN----SQEPMEAAKLREIIRTIFAKEPLVESVEYVSVARKDTMEEIMEKVEPGEGAIISLALRLGKVRLIDNIIL 309
            L   + AR +ND +I S+FVNPTQFG  ED D YPRQLERD E+    GK                                 GVD IFAP    MY  +H  YV P GFD   EG +RPGHFRGVATIVTKLF +VQPT AYFGQKDA+QCVL+RR+ EDL++   + +  T+RE+DGLAMSSRNAYL ++ER+ A VVY++L  A++ +++      E + A  LRE++R +   EPL+  V+YV+V   +TM+ + E+V   +G +ISLA  LG VRLIDNI+L
Sbjct:   15 LSLARAARSQNDVVIASIFVNPTQFGEGEDLDKYPRQLERDAEL---LGK--------------------------------IGVDHIFAPSSDTMYGKNHVTYVEPMGFDKTTEGISRPGHFRGVATIVTKLFNIVQPTNAYFGQKDAVQCVLIRRIAEDLDMDVNVQIMDTVREEDGLAMSSRNAYLSDEEREKAHVVYKSLCAAREVYESRLARGMEEVTADDLREVVRAVLETEPLITEVQYVAVDDLETMQPV-ERV-GNDGCVISLACILGPVRLIDNIVL 264          
BLAST of NO03G02750 vs. NCBI_GenBank
Match: XP_009522673.1 (Pantoate-beta alanine ligase [Phytophthora sojae] >EGZ19956.1 Pantoate-beta alanine ligase [Phytophthora sojae])

HSP 1 Score: 246.1 bits (627), Expect = 1.400e-61
Identity = 128/283 (45.23%), Postives = 179/283 (63.25%), Query Frame = 0
Query:   30 KRARKENDYLIISVFVNPTQFGPNEDFDMYPRQLERDVEMAKDTGKKIYILRSSLSRLLADKCRNVLVIRFHPLFSSCSGVDFIFAPMVADMYPSSHRCYVVPDGFDHLAEGNARPGHFRGVATIVTKLFGMVQPTKAYFGQKDAMQCVLVRRLVEDLNLLPKIVVCPTIREDDGLAMSSRNAYLGEQERQAAPVVYRALQVAQKAF----KNSQEPMEAAKLREIIRTIFAKEPLVESVEYVSVARKDTMEEIMEKVEPGEGAIISLALRLGKVRLIDNIIL 309
            + A++  D++  S+FVNP QFGPNED+  YPR  E+DV + +                                     GVD +F P   +MY   HRCYV P+GFD L EG  R GHFRGVAT+V+KLF +VQPT A+FGQKDA Q VL++R+V DLN+  +I V P +RE DGLA+S+RN YL   ER+AA V++R L  AQ  F    +N +  ++AA LR+++R  + +EPLV +++Y+SV  K+TM+E+ E V+  +G IIS+A++LG+ RLIDNI+L
Sbjct:   41 QEAKRSCDFVASSIFVNPAQFGPNEDYSKYPRTFEKDVALLQQ-----------------------------------QGVDLVFFPSANEMYSPHHRCYVDPEGFDDLVEGQCREGHFRGVATVVSKLFNIVQPTHAFFGQKDAAQVVLIKRMVSDLNIPVEINVVPIVREADGLALSTRNQYLSPVEREAAAVLHRGLAHAQDLFQQAKQNGKTTVDAAALRDVVRNEYEREPLVTAIDYISVGSKETMQEVAE-VDTTKGVIISVAVKLGQCRLIDNIVL 287          
BLAST of NO03G02750 vs. NCBI_GenBank
Match: XP_002902299.1 (pantoate beta-alanine ligase, putative [Phytophthora infestans T30-4] >EEY56971.1 pantoate beta-alanine ligase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 245.7 bits (626), Expect = 1.800e-61
Identity = 131/283 (46.29%), Postives = 177/283 (62.54%), Query Frame = 0
Query:   30 KRARKENDYLIISVFVNPTQFGPNEDFDMYPRQLERDVEMAKDTGKKIYILRSSLSRLLADKCRNVLVIRFHPLFSSCSGVDFIFAPMVADMYPSSHRCYVVPDGFDHLAEGNARPGHFRGVATIVTKLFGMVQPTKAYFGQKDAMQCVLVRRLVEDLNLLPKIVVCPTIREDDGLAMSSRNAYLGEQERQAAPVVYRAL----QVAQKAFKNSQEPMEAAKLREIIRTIFAKEPLVESVEYVSVARKDTMEEIMEKVEPGEGAIISLALRLGKVRLIDNIIL 309
            K+AR   D++  S+FVNP QFGPNED+  YPR  E+DV   K+                                    GV+ +F P   +MY   H CYV P+GFD L EG  R GHFRGVAT+VTKLF +VQPT A+FGQKDA Q VL++R+V DLN+  +I V P +RE DGLA+S+RN YL   ER+ A V++R L     + QKA K+ +  + AA LR+++R  + ++PLV +++YVSV  K TM+E+ E V+  EGAIIS+A++LG+ RLIDNI+L
Sbjct:   41 KQARSSCDFVAASIFVNPAQFGPNEDYSKYPRTFEKDVASLKE-----------------------------------QGVNLVFFPSADEMYSPHHSCYVDPEGFDDLVEGRCRKGHFRGVATVVTKLFNIVQPTHAFFGQKDAAQVVLIKRMVSDLNIPVQINVVPIVREADGLALSTRNQYLSPVEREVASVLHRGLGHAQDLFQKAKKDGKSTINAAALRDVVRQEYERQPLVNAIDYVSVGSKQTMQELSE-VDTIEGAIISVAVKLGQCRLIDNIVL 287          
The following BLAST results are available for this feature:
BLAST of NO03G02750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29713.11.000e-7272.87pantoate--beta-alanine ligase [Nannochloropsis gad... [more]
GAX18995.19.000e-6949.82pantoate--beta-alanine ligase [Fistulifera solaris... [more]
GAX15483.11.200e-6850.18pantoate--beta-alanine ligase [Fistulifera solaris... [more]
GAY05274.12.100e-6548.24Pantoate-beta alanine ligase, partial [Pythium ins... [more]
XP_008901816.19.700e-6347.00pantoate-beta-alanine ligase [Phytophthora parasit... [more]
ETL98750.19.700e-6347.00pantoate-beta-alanine ligase [Phytophthora parasit... [more]
KUF91793.19.700e-6347.00hypothetical protein AM588_10007212 [Phytophthora ... [more]
XP_002293135.16.300e-6248.43predicted protein, partial [Thalassiosira pseudona... [more]
XP_009522673.11.400e-6145.23Pantoate-beta alanine ligase [Phytophthora sojae] ... [more]
XP_002902299.11.800e-6146.29pantoate beta-alanine ligase, putative [Phytophtho... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR001ncniR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005621NSK005621Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G02750.2NO03G02750.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G02750.1NO03G02750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572181gene_1466Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100124g6gene921Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G02750.2NO03G02750.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G02750.1NO03G02750.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G02750 ID=NO03G02750|Name=NO03G02750|organism=Nannochloropsis oceanica|type=gene|length=2673bp
TGCACCGCAACCCTTTGCTCCTGTGTGTGCCGTACGCGAGGGGGTGGGGG
ATACCGAGTCTGCGTGAACTTTGTGGTCGCATGCGCCGACAATCAAGAAG
CAGAGCAGTTTTGGAGAAGGGTACGCGAGGCGTTAGGGAGTCCAAGTCAG
CCACGCGAATGTCTGGGCATCAAGGCTACGTTTAAACACGTCACAACCCG
CCTATGTCATGCACGATATCTCCTGTTTGAAATGCAAGTCAGATCTGGCC
TGGGTTGCGATGAATGGTCAAGCCCGGGGGACATGGAAAGGAGACCCATC
CGCGAGTGAACATGTGAGCGAAGGACCGGGCATCCCAAGCTCTCTTCGCA
TTGCAAATTAGCCTGCCACATTCACTACCGATGGCCCTCCATCCATATTT
TAAAGGCAAGAAGACCTATCCTGGACGCTACGACTTAGCTGTCCCTATTT
CCGTCCAAGGGAAGCGCTCACGGTGGGAGGGGGGTCTAGCATCATCGCAA
GCGAGAGAGAGGTCGTCGTTGTCGTCGTGTGGGTGAGGAGGCTGAGAGCA
TAGACAAGAAGTTTTCCCCTTGGCTTCTCGACCCAACGGCGTCAGAGTCA
AGGATAAATTATGACCAATACCTCCTGGTGGCGACGATGGGCAGGGGCAG
CGTTCGTGGCCAAAAGGTCTTTCAGAAGCGGAGAAACGCCACGgtaagca
cctctctctcaggccatttgtgtgtatctttcattcattgtttctcagct
tttacagcgcatgggttgttgcatttttgcgacccctgcctcttgctttc
atcactcacattcctccggccccctttgactgtggtcatggctgtcgttc
ccacacgcacagTATTTTACGCACGCCCGCGGAAATGATGGCACTGCGTA
GGAGTATCGACAGCCAACGTTCCGTGGGCTTCGTGCCTACAATGGGCGCC
CTTCATCACGGCCATTTGCAGCTGATGGAGgtaggcagacggctgggcag
gcctattaatagtatgtatgctacatcaagtttgccttcctttgtccctt
cacttctttccttcatttcattttctcattacccttcccgctcttcccac
cactaagCGAGCACGGAAAGAAAATGACTATCTAATCATCAGTGTGTTTG
TCAATCCAACGgtaagagtgaaggagcgcgtgaaaggggcggacaggaat
atttttgaaagaaaagaagtacgataaagatttacactctatctgtttcc
cttgataaataaattccagCAATTCGGGCCAAACGAAGACTTTGACATGT
ATCCACGGCAGCTTGAGAGGGACGTGGAGATGGCCAAGGACACAGgtaag
aaaatatatatcctaaggtcttctctttctcgcctgctagctgacaaatg
ccgcaacgttctggtaatacgcttccaccccctcttttcctcctgttcag
GCGTCGACTTCATTTTCGCTCCAATGGTGGCGGACATGTACCCTTCGTCA
CATCGTTGCTACGTGGTCCCCGACGGCTTTGATCACCTGGCGGAGGGTAA
TGCCCGACCGGGTCATTTTCGGGGCGTGGCTACCATCGTGACGAAGCTGT
TTGGCATGGTGCAGCCCACCAAGgtagataggttactttgttatggtggg
ctcggaaagagccatccactcagcgccaccttctcaaccgatgagtgctg
tccaagatccattctatccggcgtgtgcctcggggctctcttgtgtctca
tacttgcatattttccatccaacctcctgccccctccagGCGTACTTTGG
GCAGAAGGATGCCATGCAATGCGTGCTTGTGCGCCGATTGGTGGAAGACC
TAAACCTTCTCCCCAAGATCGTAGTCTGTCCAACCAgtaagtcaggcggg
tcacctaaagatgacgaccaagatgaagcacctcctgacaatcatacctc
acttcgacccttcaccccttccttgctcccgtcagTCCGCGAAGACGACG
GCCTGGCCATGAGCAGTCGCAATGCCTACCTAGGCGAGCAGgtatttcgt
gctatacttatctttcaaagtaattccttaccacttcgcacgctatcact
ctcttatctcttctcatcacccacacttccgtagGAGCGCCAGGCGGCCC
CCGTGGTTTACCGGGCGCTACAAGTCGCTCAAAAAGCATTCAAAAACTCG
CAGGAACCTATGGAGGCTGCAAAGCTCAGGGAGATTATAAGAACCATCTT
TGCCAAGgtgagatttcacgggaagaaagtatcgttatcgcgagctggaa
atcgggagctctctttttttactccctcacttgtgggagtagaatgggca
tgtatccttcctcattccctccgtttctcccccgtttcacaccagGAGCC
GCTGGTGGAAAGCGTTGAATATGTGTCGGTGGCGCGGAAGGACACGATGG
AGGAGATAATGGAGAAGGTGGAGCCCGGCGAGGGGGCCATCATCTCACTA
GCGTTGCGACTAGGCAAGGTGCGGTTGATAGATAACATTATCCTGTGAGA
GGAGGGAGAGAGGAGGTTGAGAAATAGGAAGCATTCTTTACACACATAGA
CATAGGTCAACAAGAAGAAATAAAGAAAGAAGGCACTCCAACCAAGCATT
ACGGTAATACATGCATGATTCAG
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protein sequence of NO03G02750.2

>NO03G02750.2-protein ID=NO03G02750.2-protein|Name=NO03G02750.2|organism=Nannochloropsis oceanica|type=polypeptide|length=309bp
MLHQVCLPLSLHFFPSFHFLITLPALPTTKRARKENDYLIISVFVNPTQF
GPNEDFDMYPRQLERDVEMAKDTGKKIYILRSSLSRLLADKCRNVLVIRF
HPLFSSCSGVDFIFAPMVADMYPSSHRCYVVPDGFDHLAEGNARPGHFRG
VATIVTKLFGMVQPTKAYFGQKDAMQCVLVRRLVEDLNLLPKIVVCPTIR
EDDGLAMSSRNAYLGEQERQAAPVVYRALQVAQKAFKNSQEPMEAAKLRE
IIRTIFAKEPLVESVEYVSVARKDTMEEIMEKVEPGEGAIISLALRLGKV
RLIDNIIL*
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protein sequence of NO03G02750.1

>NO03G02750.1-protein ID=NO03G02750.1-protein|Name=NO03G02750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bp
MTNTSWWRRWAGAAFVAKRSFRSGETPRILRTPAEMMALRRSIDSQRSVG
FVPTMGALHHGHLQLMERARKENDYLIISVFVNPTQFGPNEDFDMYPRQL
ERDVEMAKDTGVDFIFAPMVADMYPSSHRCYVVPDGFDHLAEGNARPGHF
RGVATIVTKLFGMVQPTKAYFGQKDAMQCVLVRRLVEDLNLLPKIVVCPT
IREDDGLAMSSRNAYLGEQERQAAPVVYRALQVAQKAFKNSQEPMEAAKL
REIIRTIFAKEPLVESVEYVSVARKDTMEEIMEKVEPGEGAIISLALRLG
KVRLIDNIIL*
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