NO03G02580, NO03G02580 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02580 vs. NCBI_GenBank
Match: EWM29688.1 (iron-sulfur cluster assembly enzyme mitochondrial-like protein [Nannochloropsis gaditana]) HSP 1 Score: 266.9 bits (681), Expect = 4.300e-68 Identity = 134/161 (83.23%), Postives = 146/161 (90.68%), Query Frame = 0 Query: 1 MLALAMCRNAAASASGMLCRAPQGFTGVATASTRRAYHENIVDHYENPRNVGSLDKNDVNVGTGLVGAPACGDVMKLQIRVDADGKIVESKFKTFGCGSAIASSSVATEWLKGKTVDECLTIKNTDIAAHLKLPPVKLHCSMLAEDAIKAAVKDLATKKGS 162 ML+ A+ NAAA+ASG + R P+G+TG+A +RR YHENIVDHYENPRNVGSLDK D NVGTGLVGAPACGDVMKLQIRVD DGKI ESKFKTFGCGSAIASSSVATEWLKGKTV+EC+ IKNTDIAAHLKLPPVKLHCSMLAEDAIKAAVKDLA+KKG+ Sbjct: 1 MLSQAIRVNAAATASGFVRRLPRGWTGIAVTGSRRTYHENIVDHYENPRNVGSLDKTDPNVGTGLVGAPACGDVMKLQIRVDEDGKITESKFKTFGCGSAIASSSVATEWLKGKTVEECMAIKNTDIAAHLKLPPVKLHCSMLAEDAIKAAVKDLASKKGT 161
BLAST of NO03G02580 vs. NCBI_GenBank
Match: CBJ33232.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 223.8 bits (569), Expect = 4.200e-55 Identity = 112/146 (76.71%), Postives = 123/146 (84.25%), Query Frame = 0 Query: 26 TGVATASTRRAYHENIVDHYENPRNVGSLDKNDVNVGTGLVGAPACGDVMKLQIRVDADGKIVESKFKTFGCGSAIASSSVATEWLKGKTVDECLTIKNTDIAAHLKLPPVKLHCSMLAEDAIKAAVKDLATKKGSASAGQEQLSA 172 +G A A RR+YH+NIV+HYENPRNVGS+DK D VGTGLVGAPACGDVMKLQI+VD +G I ESKFKTFGCGSAIASSSVATEWLKG++VDE L IKNTDIA HLKLPPVKLHCSMLAEDAIKAA+KDL K A Q L+A Sbjct: 4 SGAAVAHQRRSYHDNIVEHYENPRNVGSMDKKDKFVGTGLVGAPACGDVMKLQIKVDENGVITESKFKTFGCGSAIASSSVATEWLKGRSVDESLKIKNTDIAGHLKLPPVKLHCSMLAEDAIKAAIKDLQDKGAVAKPAQHALAA 149
BLAST of NO03G02580 vs. NCBI_GenBank
Match: OQR86904.1 (iron sulfur cluster assembly protein 1, mitochondrial precursor [Achlya hypogyna]) HSP 1 Score: 223.4 bits (568), Expect = 5.500e-55 Identity = 113/148 (76.35%), Postives = 122/148 (82.43%), Query Frame = 0 Query: 17 MLCRAPQGFTGVATASTRRAYHENIVDHYENPRNVGSLDKNDVNVGTGLVGAPACGDVMKLQIRVDADGKIVESKFKTFGCGSAIASSSVATEWLKGKTVDECLTIKNTDIAAHLKLPPVKLHCSMLAEDAIKAAVKDLATKKGSASA 165 ML R+ VA S R YHENI+DHYENPRNVG+LDK NVGTGLVGAPACGDVMKLQI VD +G IV+SKFKTFGCGSAIASSSVATEWLKGK +D+CL IKNTDIA+HLKLPPVKLHCSMLAEDAIKAAV D K+ ASA Sbjct: 3 MLQRSTARVLSVAKRSNVRMYHENIIDHYENPRNVGALDKKATNVGTGLVGAPACGDVMKLQIEVDENGTIVDSKFKTFGCGSAIASSSVATEWLKGKNIDDCLKIKNTDIASHLKLPPVKLHCSMLAEDAIKAAVNDYKKKQQMASA 150
BLAST of NO03G02580 vs. NCBI_GenBank
Match: CCI48707.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 221.9 bits (564), Expect = 1.600e-54 Identity = 108/135 (80.00%), Postives = 122/135 (90.37%), Query Frame = 0 Query: 26 TGVA-TASTRRAYHENIVDHYENPRNVGSLDKNDVNVGTGLVGAPACGDVMKLQIRVDADGKIVESKFKTFGCGSAIASSSVATEWLKGKTVDECLTIKNTDIAAHLKLPPVKLHCSMLAEDAIKAAVKDLATKK 160 TG+A +R YHEN++DHYENPRNVGSLDK +VGTGLVGAPACGDVMKLQI+VD +GKIV+SKFKTFGCGSAIASSSVATEWLKG+TVDEC++IKNTDIA+HLKLPPVKLHCSMLAEDAIKAA+KD K+ Sbjct: 25 TGIAINTIQQRQYHENVIDHYENPRNVGSLDKAAKDVGTGLVGAPACGDVMKLQIKVDENGKIVDSKFKTFGCGSAIASSSVATEWLKGRTVDECISIKNTDIASHLKLPPVKLHCSMLAEDAIKAAIKDYKKKQ 159
BLAST of NO03G02580 vs. NCBI_GenBank
Match: CCA20082.1 (iron sulfur cluster assembly protein 1 putative [Albugo laibachii Nc14]) HSP 1 Score: 221.1 bits (562), Expect = 2.700e-54 Identity = 104/126 (82.54%), Postives = 118/126 (93.65%), Query Frame = 0 Query: 34 RRAYHENIVDHYENPRNVGSLDKNDVNVGTGLVGAPACGDVMKLQIRVDADGKIVESKFKTFGCGSAIASSSVATEWLKGKTVDECLTIKNTDIAAHLKLPPVKLHCSMLAEDAIKAAVKDLATKK 160 +R YHEN++DHYENPRNVGSLDK D +VGTGLVGAPACGDVMKLQI+VD +G+IV+SKFKTFGCGSAIASSSVATEWLKG+TVDEC++IKNTDIA+HLKLPPVKLHCSMLAEDAIKAA+ D K+ Sbjct: 60 QRQYHENVIDHYENPRNVGSLDKADKDVGTGLVGAPACGDVMKLQIKVDENGRIVDSKFKTFGCGSAIASSSVATEWLKGRTVDECISIKNTDIASHLKLPPVKLHCSMLAEDAIKAAINDYKQKQ 185
BLAST of NO03G02580 vs. NCBI_GenBank
Match: XP_002181136.1 (iron-sulphur assembly protein isc [Phaeodactylum tricornutum CCAP 1055/1] >EEC47059.1 iron-sulphur assembly protein isc [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 221.1 bits (562), Expect = 2.700e-54 Identity = 109/132 (82.58%), Postives = 118/132 (89.39%), Query Frame = 0 Query: 30 TASTRRAYHENIVDHYENPRNVGSLDKNDVNVGTGLVGAPACGDVMKLQIRVDADGKIVESKFKTFGCGSAIASSSVATEWLKGKTVDECLTIKNTDIAAHLKLPPVKLHCSMLAEDAIKAAVKDLATKKGS 162 TA +RR YHENIV+HYENPRNVGSLDKND +VGTGLVGAPACGDVMKLQI+VD +G I ESKFKTFGCGSAIASSSVATEW+KGKTVD+ L I+N DIAAHLKLPPVKLHCSMLAEDAIKAAV D K+ S Sbjct: 23 TALSRRGYHENIVEHYENPRNVGSLDKNDESVGTGLVGAPACGDVMKLQIKVDENGMITESKFKTFGCGSAIASSSVATEWVKGKTVDDILAIQNADIAAHLKLPPVKLHCSMLAEDAIKAAVADWKVKQSS 154
BLAST of NO03G02580 vs. NCBI_GenBank
Match: CCI49898.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 221.1 bits (562), Expect = 2.700e-54 Identity = 113/150 (75.33%), Postives = 128/150 (85.33%), Query Frame = 0 Query: 11 AASASGMLCRAPQGFTGVA-TASTRRAYHENIVDHYENPRNVGSLDKNDVNVGTGLVGAPACGDVMKLQIRVDADGKIVESKFKTFGCGSAIASSSVATEWLKGKTVDECLTIKNTDIAAHLKLPPVKLHCSMLAEDAIKAAVKDLATKK 160 A SAS L + TG+A +R YHEN++DHYENPRNVGSLDK +VGTGLVGAPACGDVMKLQI+VD +GKIV+SKFKTFGCGSAIASSSVATEWLKG+TVDEC++IKNTDIA+HLKLPPVKLHCSMLAEDAIKAA+KD K+ Sbjct: 14 ALSASSTL----RNSTGIAINTIQQRQYHENVIDHYENPRNVGSLDKAAKDVGTGLVGAPACGDVMKLQIKVDENGKIVDSKFKTFGCGSAIASSSVATEWLKGRTVDECISIKNTDIASHLKLPPVKLHCSMLAEDAIKAAIKDYKKKQ 159
BLAST of NO03G02580 vs. NCBI_GenBank
Match: OEU20467.1 (FeS cluster assembly scaffold IscU [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 221.1 bits (562), Expect = 2.700e-54 Identity = 116/161 (72.05%), Postives = 132/161 (81.99%), Query Frame = 0 Query: 14 ASGMLCRAPQGF-TGVATASTRRAYHENIVDHYENPRNVGSLDKNDVNVGTGLVGAPACGDVMKLQIRVDADGKIVESKFKTFGCGSAIASSSVATEWLKGKTVDECLTIKNTDIAAHLKLPPVKLHCSMLAEDAIKAAVKDLATKKGSASAGQEQLSAMA 174 AS ++ R F + +A + R+YHENIV+HYENPRNVGSLDKN+++VGTGLVGAPACGDVMKLQI+VD DG I ESKFKTFGCGSAIA+SSVATEW+KGK VDE L IKN+DIAAHLKLPPVKLHCSMLAEDAIKAAVKD K+ EQLS+ A Sbjct: 9 ASRVITRRTTVFGSSIANSPFARSYHENIVEHYENPRNVGSLDKNELSVGTGLVGAPACGDVMKLQIKVDDDGNITESKFKTFGCGSAIAASSVATEWVKGKNVDEVLAIKNSDIAAHLKLPPVKLHCSMLAEDAIKAAVKDWKAKQA------EQLSSEA 163
BLAST of NO03G02580 vs. NCBI_GenBank
Match: XP_012205231.1 (iron-sulfur cluster assembly enzyme ISCU [Saprolegnia parasitica CBS 223.65] >XP_012211389.1 iron-sulfur cluster assembly enzyme ISCU [Saprolegnia parasitica CBS 223.65] >KDO17901.1 iron-sulfur cluster assembly enzyme ISCU [Saprolegnia parasitica CBS 223.65] >KDO24095.1 iron-sulfur cluster assembly enzyme ISCU [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 219.5 bits (558), Expect = 7.900e-54 Identity = 108/137 (78.83%), Postives = 116/137 (84.67%), Query Frame = 0 Query: 28 VATASTRRAYHENIVDHYENPRNVGSLDKNDVNVGTGLVGAPACGDVMKLQIRVDADGKIVESKFKTFGCGSAIASSSVATEWLKGKTVDECLTIKNTDIAAHLKLPPVKLHCSMLAEDAIKAAVKDLATKKGSASA 165 + A R YHENI+DHYENPRNVG+LDK NVGTGLVGAPACGDVMKLQI VD G IV+SKFKTFGCGSAIASSSVATEWLKGK +D+CL IKNTDIA+HLKLPPVKLHCSMLAEDAIKAAV D K+ ASA Sbjct: 24 LGAAGPVRMYHENIIDHYENPRNVGALDKKSTNVGTGLVGAPACGDVMKLQIEVDEHGTIVDSKFKTFGCGSAIASSSVATEWLKGKNIDDCLKIKNTDIASHLKLPPVKLHCSMLAEDAIKAAVNDYKKKQQKASA 160
BLAST of NO03G02580 vs. NCBI_GenBank
Match: XP_008608595.1 (iron-sulfur cluster assembly enzyme ISCU, mitochondrial [Saprolegnia diclina VS20] >EQC38268.1 iron-sulfur cluster assembly enzyme ISCU, mitochondrial [Saprolegnia diclina VS20]) HSP 1 Score: 218.0 bits (554), Expect = 2.300e-53 Identity = 107/137 (78.10%), Postives = 116/137 (84.67%), Query Frame = 0 Query: 28 VATASTRRAYHENIVDHYENPRNVGSLDKNDVNVGTGLVGAPACGDVMKLQIRVDADGKIVESKFKTFGCGSAIASSSVATEWLKGKTVDECLTIKNTDIAAHLKLPPVKLHCSMLAEDAIKAAVKDLATKKGSASA 165 + A R YHENI+DHYENPRNVG+LDK NVGTGLVGAPACGDVMKLQI VD G IV+SKFKTFGCGSAIASSSVATEWLKGK +D+CL IKNTDIA+HLKLPPVKLHCSMLAEDAIKAAV D +K+ SA Sbjct: 20 LGAAGPVRMYHENIIDHYENPRNVGALDKKATNVGTGLVGAPACGDVMKLQIEVDEHGTIVDSKFKTFGCGSAIASSSVATEWLKGKNIDDCLKIKNTDIASHLKLPPVKLHCSMLAEDAIKAAVNDYKSKQQKVSA 156 The following BLAST results are available for this feature:
BLAST of NO03G02580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02580 ID=NO03G02580|Name=NO03G02580|organism=Nannochloropsis oceanica|type=gene|length=1634bpback to top protein sequence of NO03G02580.1 >NO03G02580.1-protein ID=NO03G02580.1-protein|Name=NO03G02580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=174bpback to top Synonyms
Publications
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