NO03G02460, NO03G02460 (gene) Nannochloropsis oceanica

Overview
NameNO03G02460
Unique NameNO03G02460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1966
Alignment locationchr3:708016..709981 -

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Properties
Property NameValue
DescriptionPhosphorylated CTD interacting factor 1, WW domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:708016..709981 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR022035PCIF1_WW
Homology
BLAST of NO03G02460 vs. NCBI_GenBank
Match: EWM29696.1 (Phosphorylated CTD interacting factor 1, WW domain protein [Nannochloropsis gaditana])

HSP 1 Score: 519.6 bits (1337), Expect = 1.300e-143
Identity = 288/576 (50.00%), Postives = 338/576 (58.68%), Query Frame = 0
Query:    1 MDALLDEMYKTQVGGMPREGTDEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWRPDIKPPKDALRHAKA-RCQGYIRPSPELNLEILRHNAVGNLTCFFLNKVNRGLEMDLRIPPFERWLFSQHRIDGSDDPILPDPRLGDEHAKAGRTLLRRELVDGGVSKSSAEKVMSDLNKTAVKLLGQVQRASAMMGSVSSDLKGR-QPL--IRVRFDAGRGLYQLQHKATTVTVNQAHYDKLQALHARFG------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTERGGGFQGAINEEAFDVLLRLFDCRMECFASPLNCRYPRYCSAFEDTDGYFGSLGSFFSFFPKEGVYEANPPFLPCVIERMAQHMEELLQASERPLGFVVVIPAW---KPEEVQAGEAGXXXXXXXXXXXXXXXXAAVQGKAISIAIAPHYHNNXXXXXXXXXXXXXXRPKSIYTASGSSWRRLRESPFCVRHVLLRAQSHGYVEGSQHKLPTRFKTSYFDTSVFVLQNGAGREAWPVTEEAVRELEWACKSKHEAETAARRGEGG 564
            MDALL+EMY  Q GG       ++                                        +WRP++KPP DAL HAK       +   P L+LEILRH+A+G LTCFFLNKVNR L MDLR+P FERWLFSQ   DG+ DPILPDPRL +EH +AGR LL REL++GG S  +A++V+  LNKTAVKLL ++QRASA +   S  L+ R Q L  I V FDAGRGLY L+HK+ TVTVN+ HY+KL+ALHARFG                                                AGGT+RGGGFQGAINEEAFDVL R  DCRMECFASPLNC Y RYCSAF+DTD  FGSLG+FF+F P++G YEANPPF PCVI RM  HME+LL+A+  PLGFVVVIPAW   K E  +  E                   A +G ++S                          K+IY AS +SW RLRES FC  HVLLRAQ HGY+EG QHK PTRFKTS+FDTSVF LQN A +  WP +E    EL+ AC SKHEAETAARR + G
Sbjct:    1 MDALLEEMYMAQRGGSTSYAHKDI-------------KAPETEEGPEEDAGDNPTCAASSSTPSLWRPEVKPPMDALHHAKTYNSAQNMMHQPSLSLEILRHDAIGTLTCFFLNKVNRDLGMDLRVPLFERWLFSQRPTDGTGDPILPDPRLNNEHERAGRHLLMRELIEGGASNDTAKRVIEQLNKTAVKLLCRIQRASASLNPPSVSLEARWQSLSKIYVHFDAGRGLYSLRHKSKTVTVNRRHYEKLRALHARFGGMSINRPGIDRSQGNLKHGKRERPGKSAEEERFFHLRVFLLLLRYSSLAGGTDRGGGFQGAINEEAFDVLRRHLDCRMECFASPLNCMYARYCSAFQDTDACFGSLGTFFNFRPRQGTYEANPPFSPCVIARMVDHMEDLLEATALPLGFVVVIPAWQDGKGERTREDEEKGVTREAEEERPESTRVTASKGASMS------------------REPNKRGAKAIYKASAASWSRLRESSFCALHVLLRAQDHGYIEGGQHKTPTRFKTSFFDTSVFFLQNAAAKRKWPASERMAEELKQACASKHEAETAARRRDQG 545          
BLAST of NO03G02460 vs. NCBI_GenBank
Match: POM67717.1 (hypothetical protein PHPALM_16228 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 214.5 bits (545), Expect = 9.300e-52
Identity = 148/463 (31.97%), Postives = 205/463 (44.28%), Query Frame = 0
Query:   96 LEILRHNAVGNLTCFFLNKVNRGLEM-DLRIPPFERWLFSQHRIDGSDDPILPDPRLGDEHAKAGRTLLRRELVDGGVSKSSAEKVMSDLNKTAVKLLGQVQRASAMMGSVSSDLKGRQPLIRVRFDAGRGLYQLQHKATTVTVNQAHYDKLQALHARFGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTERGGGFQGAINEEAFDVLLRLFDCRMECFASPLNCRYPRYCSAFEDTDGYFGSLGSFFSFFPKEGVYEANPPFLPCVIERMAQHMEELLQASERPLGFVVVIPAWKPEEVQAGEAGXXXXXXXXXXXXXXXXAAVQGKAISIAIAPHYHNNXXXXXXXXXXXXXXRPKSIYTASGSSWRRLRESPFCVRHVLLRAQSHGYVEGSQHKLPTRFKTSYFDTSVFVLQNGAGREAWPVTEEAVRELEWACKSKHEAETAA 558
            +EI R   V  L C  + +V+  L +  L    +E W F+        DP++P       HA +  + L  EL   G +KS A K   +L + + ++L +  +   + G      K ++  + V  D   G+ QL +  +TV ++  H+ KL+ ++AR                                                  GGGFQ A+NEE FDVLL+ FDC++ECFASPLNCRY R+CSAF DTD  FGS+GSFF F P+ G +EANPPF+P VI+RMA HM  LL A++ PL F+V+IPAWK  E                                                                    W++L  S F   H+L+  + HGY EG Q    TR++ + FDTSVF  QN      WPVTE+ +  L+ A KSK   E  A
Sbjct:    1 MEIARQQTVRAL-CNKIRRVSEDLGIGKLPNSAYETWQFTSQLTVKEHDPLIP-------HAGSDYSGLFEELRKAGATKSGATKKCKELTRESERMLRKFSQQDFVAG------KKKKVHVAVMED---GMRQLTYGNSTVKLSADHFAKLREMYARKQELSGDGSSMAPKDQRKFESALFCLLLRYDSLD----------------GGGFQAALNEECFDVLLKEFDCKLECFASPLNCRYSRFCSAFLDTDFMFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWKETE-------------------------------------------------------------------GWQQLNTSRFNQTHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLESLKLAFKSKQADERDA 363          
BLAST of NO03G02460 vs. NCBI_GenBank
Match: KUF81667.1 (Phosphorylated CTD-interacting factor 1 [Phytophthora nicotianae])

HSP 1 Score: 213.8 bits (543), Expect = 1.600e-51
Identity = 157/498 (31.53%), Postives = 213/498 (42.77%), Query Frame = 0
Query:   65 IWRPDIKPPKDALRHAKARCQGYIRPSPELNLEILRHNAVGNLTCFFLNKVNRGLEMDLRI-----PPFERWLFSQHRIDGSDDPILPDPRLGDEHAKAGRTLLRRELVDGGVSKSSAEKVMSDLNKTAVKLLGQVQRASAMMGSVSSDLKGRQPLIRVRFDAGRGLYQLQHKATTVTVNQAHYDKLQALHARFGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTERGGGFQGAINEEAFDVLLRLFDCRMECFASPLNCRYPRYCSAFEDTDGYFGSLGSFFSFFPKEGVYEANPPFLPCVIERMAQHMEELLQASERPLGFVVVIPAWKPEEVQAGEAGXXXXXXXXXXXXXXXXAAVQGKAISIAIAPHYHNNXXXXXXXXXXXXXXRPKSIYTASGSSWRRLRESPFCVRHVLLRAQSHGYVEGSQHKLPTRFKTSYFDTSVFVLQNGAGREAWPVTEEAVRELEWACKSKHEAETAA 558
            IW P  + P  +    K       RP     +EI R   V  L     NK+ R  E DL I       +E W F+        DP++P       HA +  + L  E    G +KS A K   +L + + ++L +  +   + G      K ++  + V  D   G+ QL +   TV ++  H+ KL+ + AR                                               +  GGGFQ A+NEE FD+LL+ FDC+MECFASPLNCRY R+CSAF DTD  FGS+GSFF F P+ G +EANPPF+P VI+RMA HM  LL A++ PL F+V+IPAW+  E                                                                    W++L  S F  RH+L+  + HGY EG Q    TR++ + FDTSVF  QN      WPVTE+ +  L+ A KSK   E  A
Sbjct:   54 IWNPLEEMPLSSTVLRKLEDAARTRPVNPA-MEIARQQTVRAL----CNKIRRASE-DLGIGKLPNSAYETWQFTSQLTVKEHDPLIP-------HAGSDYSGLFEEFRKAGATKSGATKKCKELTRESERMLRKFGQQDFVAG------KKKKVQVTVMED---GMRQLTYGHLTVKLSADHFAKLREMFAR----------------KQGLGGDGSNMALKVQRQFESALFCLLLRYDSLDGGGFQAALNEECFDMLLKXFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETE-------------------------------------------------------------------GWQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLESLKLAFKSKQADERDA 446          
BLAST of NO03G02460 vs. NCBI_GenBank
Match: ETI43867.1 (hypothetical protein F443_11310 [Phytophthora parasitica P1569] >ETK83917.1 hypothetical protein L915_11020 [Phytophthora parasitica] >ETM43807.1 hypothetical protein L914_10859 [Phytophthora parasitica])

HSP 1 Score: 213.0 bits (541), Expect = 2.700e-51
Identity = 157/498 (31.53%), Postives = 213/498 (42.77%), Query Frame = 0
Query:   65 IWRPDIKPPKDALRHAKARCQGYIRPSPELNLEILRHNAVGNLTCFFLNKVNRGLEMDLRI-----PPFERWLFSQHRIDGSDDPILPDPRLGDEHAKAGRTLLRRELVDGGVSKSSAEKVMSDLNKTAVKLLGQVQRASAMMGSVSSDLKGRQPLIRVRFDAGRGLYQLQHKATTVTVNQAHYDKLQALHARFGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTERGGGFQGAINEEAFDVLLRLFDCRMECFASPLNCRYPRYCSAFEDTDGYFGSLGSFFSFFPKEGVYEANPPFLPCVIERMAQHMEELLQASERPLGFVVVIPAWKPEEVQAGEAGXXXXXXXXXXXXXXXXAAVQGKAISIAIAPHYHNNXXXXXXXXXXXXXXRPKSIYTASGSSWRRLRESPFCVRHVLLRAQSHGYVEGSQHKLPTRFKTSYFDTSVFVLQNGAGREAWPVTEEAVRELEWACKSKHEAETAA 558
            IW P  + P  +    K       RP     +EI R   V  L     NK+ R  E DL I       +E W F+        DP++P       HA +  + L  E    G +KS A K   +L + + ++L +  +   + G      K ++  + V  D   G+ QL +   TV ++  H+ KL+ + AR                                               +  GGGFQ A+NEE FD+LL+ FDC+MECFASPLNCRY R+CSAF DTD  FGS+GSFF F P+ G +EANPPF+P VI+RMA HM  LL A++ PL F+V+IPAW+  E                                                                    W++L  S F  RH+L+  + HGY EG Q    TR++ + FDTSVF  QN      WPVTE+ +  L+ A KSK   E  A
Sbjct:   54 IWNPLEEMPLSSTVLRKLEDAARTRPVNPA-MEIARQQTVRAL----CNKIRRASE-DLGIGKLPNSAYETWQFTSQLTVKEHDPLIP-------HAGSDYSGLFEEFRKAGATKSGATKKCKELTRESERMLRKFGQQDFVAG------KKKKVQVTVMED---GMRQLTYGHLTVKLSADHFAKLREMFAR----------------KQGLGGDGSNMALKVQRQFESALFCLLLRYDSLDGGGFQAALNEECFDMLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETE-------------------------------------------------------------------GWQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLESLKLAFKSKQADERDA 446          
BLAST of NO03G02460 vs. NCBI_GenBank
Match: XP_008907312.1 (hypothetical protein PPTG_13417 [Phytophthora parasitica INRA-310] >ETL37331.1 hypothetical protein L916_10919 [Phytophthora parasitica] >ETL90492.1 hypothetical protein L917_10825 [Phytophthora parasitica] >ETN07555.1 hypothetical protein PPTG_13417 [Phytophthora parasitica INRA-310])

HSP 1 Score: 213.0 bits (541), Expect = 2.700e-51
Identity = 157/498 (31.53%), Postives = 213/498 (42.77%), Query Frame = 0
Query:   65 IWRPDIKPPKDALRHAKARCQGYIRPSPELNLEILRHNAVGNLTCFFLNKVNRGLEMDLRI-----PPFERWLFSQHRIDGSDDPILPDPRLGDEHAKAGRTLLRRELVDGGVSKSSAEKVMSDLNKTAVKLLGQVQRASAMMGSVSSDLKGRQPLIRVRFDAGRGLYQLQHKATTVTVNQAHYDKLQALHARFGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTERGGGFQGAINEEAFDVLLRLFDCRMECFASPLNCRYPRYCSAFEDTDGYFGSLGSFFSFFPKEGVYEANPPFLPCVIERMAQHMEELLQASERPLGFVVVIPAWKPEEVQAGEAGXXXXXXXXXXXXXXXXAAVQGKAISIAIAPHYHNNXXXXXXXXXXXXXXRPKSIYTASGSSWRRLRESPFCVRHVLLRAQSHGYVEGSQHKLPTRFKTSYFDTSVFVLQNGAGREAWPVTEEAVRELEWACKSKHEAETAA 558
            IW P  + P  +    K       RP     +EI R   V  L     NK+ R  E DL I       +E W F+        DP++P       HA +  + L  E    G +KS A K   +L + + ++L +  +   + G      K ++  + V  D   G+ QL +   TV ++  H+ KL+ + AR                                               +  GGGFQ A+NEE FD+LL+ FDC+MECFASPLNCRY R+CSAF DTD  FGS+GSFF F P+ G +EANPPF+P VI+RMA HM  LL A++ PL F+V+IPAW+  E                                                                    W++L  S F  RH+L+  + HGY EG Q    TR++ + FDTSVF  QN      WPVTE+ +  L+ A KSK   E  A
Sbjct:   54 IWNPLEEMPLSSTVLRKLEDAARTRPVNPA-MEIARQQTVRAL----CNKIRRASE-DLGIGKLPNSAYETWQFTSQLTVKEHDPLIP-------HAGSDYSGLFEEFRKAGATKSGATKKCKELTRESERMLRKFGQQDFVAG------KKKKVQVTVMED---GMRQLTYGHLTVKLSADHFAKLREMFAR----------------KQGLGGDGSNMALEVQRQFESALFCLLLRYDSLDGGGFQAALNEECFDMLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETE-------------------------------------------------------------------GWQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLESLKLAFKSKQADERDA 446          
BLAST of NO03G02460 vs. NCBI_GenBank
Match: ETO72570.1 (hypothetical protein F444_11377 [Phytophthora parasitica P1976] >ETP13683.1 hypothetical protein F441_11231 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 213.0 bits (541), Expect = 2.700e-51
Identity = 157/498 (31.53%), Postives = 213/498 (42.77%), Query Frame = 0
Query:   65 IWRPDIKPPKDALRHAKARCQGYIRPSPELNLEILRHNAVGNLTCFFLNKVNRGLEMDLRI-----PPFERWLFSQHRIDGSDDPILPDPRLGDEHAKAGRTLLRRELVDGGVSKSSAEKVMSDLNKTAVKLLGQVQRASAMMGSVSSDLKGRQPLIRVRFDAGRGLYQLQHKATTVTVNQAHYDKLQALHARFGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTERGGGFQGAINEEAFDVLLRLFDCRMECFASPLNCRYPRYCSAFEDTDGYFGSLGSFFSFFPKEGVYEANPPFLPCVIERMAQHMEELLQASERPLGFVVVIPAWKPEEVQAGEAGXXXXXXXXXXXXXXXXAAVQGKAISIAIAPHYHNNXXXXXXXXXXXXXXRPKSIYTASGSSWRRLRESPFCVRHVLLRAQSHGYVEGSQHKLPTRFKTSYFDTSVFVLQNGAGREAWPVTEEAVRELEWACKSKHEAETAA 558
            IW P  + P  +    K       RP     +EI R   V  L     NK+ R  E DL I       +E W F+        DP++P       HA +  + L  E    G +KS A K   +L + + ++L +  +   + G      K ++  + V  D   G+ QL +   TV ++  H+ KL+ + AR                                               +  GGGFQ A+NEE FD+LL+ FDC+MECFASPLNCRY R+CSAF DTD  FGS+GSFF F P+ G +EANPPF+P VI+RMA HM  LL A++ PL F+V+IPAW+  E                                                                    W++L  S F  RH+L+  + HGY EG Q    TR++ + FDTSVF  QN      WPVTE+ +  L+ A KSK   E  A
Sbjct:   54 IWNPLEEMPLSSTVLRKLEDAARTRPVNPA-MEIARQQTVRAL----CNKIRRASE-DLGIGKLPNSAYETWQFTSQLTVKEHDPLIP-------HAGSDYSGLFEEFRKAGATKSGATKKCKELTRESERMLRKFGQQDFVAG------KKKKVQVTVMED---GMRQLTYGHLTVKLSADHFAKLREMFAR----------------KQGLGGDGSNMALKVQRQFESALFCLLLRYDSLDGGGFQAALNEECFDMLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETE-------------------------------------------------------------------GWQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLESLKLAFKSKQADERDA 446          
BLAST of NO03G02460 vs. NCBI_GenBank
Match: GAX99119.1 (Hypothetical protein PINS_006965 [Pythium insidiosum])

HSP 1 Score: 210.7 bits (535), Expect = 1.300e-50
Identity = 154/500 (30.80%), Postives = 214/500 (42.80%), Query Frame = 0
Query:   65 IWRPDI--KPPKDALRHAKARCQGY-IRPSPELNLEILRHNAVGNLTCFFLNKVNRGL-EMDLRIPP---FERWLFSQHRIDGSDDPILPDPRLGDEHAKAGRTLLRRELVDGGVSKSSAEKVMSDLNKTAVKLLGQVQRASAMMGSVSSDLKGRQPLIRVRFDAGRGLYQLQHKATTVTVNQAHYDKLQALHARFGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTERGGGFQGAINEEAFDVLLRLFDCRMECFASPLNCRYPRYCSAFEDTDGYFGSLGSFFSFFPKEGVYEANPPFLPCVIERMAQHMEELLQASERPLGFVVVIPAWKPEEVQAGEAGXXXXXXXXXXXXXXXXAAVQGKAISIAIAPHYHNNXXXXXXXXXXXXXXRPKSIYTASGSSWRRLRESPFCVRHVLLRAQSHGYVEGSQHKLPTRFKTSYFDTSVFVLQNGAGREAWPVTEEAVRELEWACKSKHEAETAA 558
            IW P +  + P++ L     R     I P+    +EI R   V  L      K+ R   EM +   P   +E W F+        DP++P       H+ +  + L  EL+  G +++ A+K   +L K A K+L    R        SS  +      RV+     G+  L + A +V +++ H+ KL+ L+ R  +                                               GGGFQ A+NEE FDVLLR FDC+MECFASPLN RY R+CSAF D+D  FGS+GSFF F P+ G +EANPPF+P +I+RMA HM  LL A++ PL FV++IPAW+  E                                                                    WR L +S +   H L+  + HGY EG Q    TR++ + FDTSVF  QN      W VT E++R+L  A +SK   E  A
Sbjct:   56 IWNPKVYERLPQELLDDVAHRASSMTISPA----MEIARQQVVRQL----CQKIRRASEEMGINKLPNSVYETWQFTSRLTVAEVDPLIP-------HSSSDYSGLFEELIKAGATRTGAKKKCQELTKEAEKML----RRFKAQNFESSQKR------RVKVSEQDGMRVLTYGACSVKLSEDHFAKLRRLYERQAKKRISRPQDQHAFEAAVFSLLLRYDSLD--------------------GGGFQAALNEECFDVLLRHFDCKMECFASPLNSRYSRFCSAFLDSDAAFGSVGSFFEFTPRSGSFEANPPFIPKLIKRMADHMTALLDAADGPLMFVIIIPAWRETE-------------------------------------------------------------------GWRLLHKSRYNQHHELIPQKDHGYCEGKQQIRKTRWRIASFDTSVFFWQNAKAMNRWQVTTESIRDLRLAFQSKQAEERDA 443          
BLAST of NO03G02460 vs. NCBI_GenBank
Match: ETP41745.1 (hypothetical protein F442_11218 [Phytophthora parasitica P10297])

HSP 1 Score: 209.9 bits (533), Expect = 2.300e-50
Identity = 156/498 (31.33%), Postives = 212/498 (42.57%), Query Frame = 0
Query:   65 IWRPDIKPPKDALRHAKARCQGYIRPSPELNLEILRHNAVGNLTCFFLNKVNRGLEMDLRI-----PPFERWLFSQHRIDGSDDPILPDPRLGDEHAKAGRTLLRRELVDGGVSKSSAEKVMSDLNKTAVKLLGQVQRASAMMGSVSSDLKGRQPLIRVRFDAGRGLYQLQHKATTVTVNQAHYDKLQALHARFGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTERGGGFQGAINEEAFDVLLRLFDCRMECFASPLNCRYPRYCSAFEDTDGYFGSLGSFFSFFPKEGVYEANPPFLPCVIERMAQHMEELLQASERPLGFVVVIPAWKPEEVQAGEAGXXXXXXXXXXXXXXXXAAVQGKAISIAIAPHYHNNXXXXXXXXXXXXXXRPKSIYTASGSSWRRLRESPFCVRHVLLRAQSHGYVEGSQHKLPTRFKTSYFDTSVFVLQNGAGREAWPVTEEAVRELEWACKSKHEAETAA 558
            IW P  + P  +    K       RP     +EI R   V  L     NK+ R  E DL I       +E W F+        DP++P       HA +  + L  E    G +KS A K   +L + + ++L +  +   + G      K ++  + V  D   G+ QL +   TV ++  H+ KL+ + AR                                               +  GGGFQ A+NEE FD+LL+ FDC+MECFASPLNCRY R+CSAF DTD  FGS+GSFF F P+ G +EANPPF+  VI+RMA HM  LL A++ PL F+V+IPAW+  E                                                                    W++L  S F  RH+L+  + HGY EG Q    TR++ + FDTSVF  QN      WPVTE+ +  L+ A KSK   E  A
Sbjct:   54 IWNPLEEMPLSSTVLRKLEDAARTRPVNPA-MEIARQQTVRAL----CNKIRRASE-DLGIGKLPNSAYETWQFTSQLTVKEHDPLIP-------HAGSDYSGLFEEFRKAGATKSGATKKCKELTRESERMLRKFGQQDFVAG------KKKKVQVTVMED---GMRQLTYGHLTVKLSADHFAKLREMFAR----------------KQGLGGDGSNMALKVQRQFESALFCLLLRYDSLDGGGFQAALNEECFDMLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFISKVIKRMADHMTALLNAADGPLAFIVIIPAWQETE-------------------------------------------------------------------GWQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLESLKLAFKSKQADERDA 446          
BLAST of NO03G02460 vs. NCBI_GenBank
Match: XP_009514873.1 (hypothetical protein PHYSODRAFT_467960 [Phytophthora sojae] >EGZ27598.1 hypothetical protein PHYSODRAFT_467960 [Phytophthora sojae])

HSP 1 Score: 206.5 bits (524), Expect = 2.500e-49
Identity = 152/469 (32.41%), Postives = 204/469 (43.50%), Query Frame = 0
Query:   96 LEILRHNAVGNLTCFFLNKVNRGLEMDLRI-----PPFERWLFSQHRIDGSDDPILPDPRLGDEHAKAGRTLLRRELVDGGVSKSSAEKVMSDLNKTAVKLLGQVQRASAMMGSVSSDLKGRQPLIRVRFDAGR-GLYQLQHKATTVTVNQAHYDKLQALHARFGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTERGGGF-QGAINEEAFDVLLRLFDCRMECFASPLNCRYPRYCSAFEDTDGYFGSLGSFFSFFPKEGVYEANPPFLPCVIERMAQHMEELLQASERPLGFVVVIPAWKPEEVQAGEAGXXXXXXXXXXXXXXXXAAVQGKAISIAIAPHYHNNXXXXXXXXXXXXXXRPKSIYTASGSSWRRLRESPFCVRHVLLRAQSHGYVEGSQHKLPTRFKTSYFDTSVFVLQNGAGREAWPVTEEAVRELEWACKSKHEAETAA 558
            +EI R   V  L     NK+ R  E DL I       +E W F+        DP++P       HA +  + L  EL   G +KS A K   +L + + +LL +  +   + G             RV   A   G+ QL +  +TV ++ AH+ KL+ ++AR                                               +  GGGF Q A+NEE FDVLL+ FDC+MECFASPLNCRY R+CSAF DTD  FGS+GSFF F P+ G +EANPPF+P VI+RMA HM  LL A++ PL F+V+IPAW+  E                                                                    W++L  S +   H+L+  + HGY EG Q    TR++ + FDTSVF  QN      WPVTE+ +  L+ A KSK   E  A
Sbjct:    1 MEIARQQTVRAL----CNKIRRASE-DLGIGKLPNSAYETWQFTSQLKVKELDPLIP-------HAGSDYSGLFEELRKAGATKSGATKKCKELTRESERLLRKFGQQDFVAGKKK----------RVHVAAAEDGMRQLTYGNSTVKLSAAHFAKLREMYAR----------------KQGLGGDGSSMAPKDQRSFESALFCLLLRYDSLDGGGFQQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDCAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQDTE-------------------------------------------------------------------GWQQLNSSRYNQTHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLDSLKSAFKSKQADERDA 364          
BLAST of NO03G02460 vs. NCBI_GenBank
Match: XP_002997685.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY67986.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 204.1 bits (518), Expect = 1.300e-48
Identity = 139/427 (32.55%), Postives = 193/427 (45.20%), Query Frame = 0
Query:  140 GSDDPILPDPRLGDEHAKAGRTLLRRELVDGGVSKSSAEKVMSDLNKTAVKLLGQVQRASAMMGSVSSDLKGRQPLIRVRFDAGRGLYQLQHKATTVTVNQAHYDKLQALHARFGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTERGGGFQGAINEEAFDVLLRLFDCRMECFASPLNCRYPRYCSAFEDTDGYFGSLGSFFSFFPKEGVYEANPPFLPCVIERMAQHMEELLQASERPLGFVVVIPAWKPEEVQAGEAGXXXXXXXXXXXXXXXXAAVQGKAISIAIAPHYHNNXXXXXXXXXXXXXXRPKSIYTASGSSWRRLRESPFCVRHVLLRAQSHGYVEGSQHKLPTRFKTSYFDTSVFVLQNGAGREAWPVTEEAVRELEWACKSKH--EAETAARRGEGGR 565
            GS DP++P       HA +    L  EL   G +KS A K   ++ + + ++L +  +   ++G      K ++  + V  D   G+ QL +  +TV ++  H+ KL+ + A+                                               +  GGGFQ A+NEE FDVLL+ FDC+MECFASPLNCRY R+CSAF DTD  FGS+GSFF F P+ G +EANPPF+P VI+RMA HM  LL A++ PL F+V+IPAW+  E                                                                    W++L  S F  RH+L+  + HGY EG Q    TR++ + FDTSVF  QN      WPVTE+ +  L+ A +SK   E +T   R  G R
Sbjct:   11 GSRDPLIP-------HAGSDYNGLFEELRKAGATKSGAIKKCKEITRESERMLRKFGQQDFVVG------KKKKVQVTVMED---GMRQLTYGRSTVKLSANHFTKLREMFAK----------------KQGLGGDGSNMAPKDQQQLECALFCLLLRYESLDGGGFQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETE-------------------------------------------------------------------GWQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLEGLKQAFRSKQADERDTLGLRKSGKR 338          
The following BLAST results are available for this feature:
BLAST of NO03G02460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29696.11.300e-14350.00Phosphorylated CTD interacting factor 1, WW domain... [more]
POM67717.19.300e-5231.97hypothetical protein PHPALM_16228 [Phytophthora pa... [more]
KUF81667.11.600e-5131.53Phosphorylated CTD-interacting factor 1 [Phytophth... [more]
ETI43867.12.700e-5131.53hypothetical protein F443_11310 [Phytophthora para... [more]
XP_008907312.12.700e-5131.53hypothetical protein PPTG_13417 [Phytophthora para... [more]
ETO72570.12.700e-5131.53hypothetical protein F444_11377 [Phytophthora para... [more]
GAX99119.11.300e-5030.80Hypothetical protein PINS_006965 [Pythium insidios... [more]
ETP41745.12.300e-5031.33hypothetical protein F442_11218 [Phytophthora para... [more]
XP_009514873.12.500e-4932.41hypothetical protein PHYSODRAFT_467960 [Phytophtho... [more]
XP_002997685.11.300e-4832.55conserved hypothetical protein [Phytophthora infes... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR001ncniR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005653NSK005653Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G02460.1NO03G02460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|549146gene_1433Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100114g9gene946Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G02460.1NO03G02460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G02460 ID=NO03G02460|Name=NO03G02460|organism=Nannochloropsis oceanica|type=gene|length=1966bp
ATGGACGCCTTGTTGGACGAAATGTACAAAACTCAAGTGGGAGGGATGCC
CAGAGAAGGAACAGATGAAGTAGCAACCGCAACAGCAGCAGCAGCAGCGG
TATCCTCCAAAGACTCAGACGACGATGACGACGACGACGACAACGACGCC
CAAACCTCCCTTCCCTCCCCCACTAGCCCATCCTCTTCCTCTATCTGGCG
CCCTGACATTAAGCCTCCCAAGGATGCCCTCCGCCACGCCAAGGCCCGTT
GCCAAGGATACATTCGCCCGTCTCCCGAACTGAATCTGGAAATTTTGCGA
CACAACGCCGTGGGAAACTTGACGTGCTTTTTCCTCAACAAGGTCAACCG
AGGGTTGGAAATGGATCTGCGAATCCCGCCATTTGAACGCTGGCTCTTTT
CGCAACACAGGATAGATGGGAGTGATGACCCGATTTTGCCAGACCCCCGT
TTGGGGGATGAGCATGCCAAGGCTGGGCGGACGTTGTTGAGGCGGGAGTT
AGTGGACGGAGGGGTGAGCAAGAGCAGTGCCGAGAAGGTGATGAGTGATT
TGAATAAGACGGCCGTGAAGCTCCTGGGGCAAGTACAGCGGGCTTCGGCT
ATGATGGGCTCTGTAAGCAGTGACTTGAAGGGACGACAACCATTGATTCG
AGTGCGGTTTGACGCCGGGCGGGGCCTATATCAGCTACAGCATAAGGCCA
CGACCGTGACGGTCAATCAAGCGCATTATGACAAGCTCCAGGCACTGCAC
GCTCGCTTTGGTCGCGAAGAACAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAAGCAAAATGTAACGACGTAAAAGGGCAGGAAAAGAATCGGTTTCACC
ATCGGTTGTTCCTCCTCCTCTTGCGGTATAGTAGCCTCGCGGGAGGTACC
GAGCGAGGGGGCGGGTTCCAGGGGGCGATCAACGAAGAGGCCTTCGACGT
CCTCCTTCGTCTATTCGACTGTCGGATGGAATGCTTTGCTTCTCCGCTGA
ATTGCCGCTATCCTCGTTACTGCTCTGCGTTCGAGGACACGGATGGATAT
TTTGGAAGTCTGGGGTCCTTTTTCTCGTTTTTCCCCAAGGAAGGGGTGTA
CGAAGCGAATCCTCCTTTTTTGCCTTGTGTGATCGAGCGGATGGCGCAGC
ATATGGAGGAGCTGTTACAAGCGAGCGAAAGGCCACTAGGATTTGTGGTG
GTCATCCCCGCGTGGAAACCCGAGGAGGTACAGGCGGGCGAGGCAGGGAA
GGAGGGAGGGAAGGAGGAAGGGAAGGAGGAAGGGAAGGAGCACCCGGCGG
CAGTGCAGGGCAAAGCCATTTCCATCGCTATTGCTCCTCACTATCACAAC
AACCACAAGAACCATCAAAGTAGTCGTATGAAGAAGGGCAAAAAAAGACC
TAAGTCCATCTATACAGCCTCAGGGTCGTCGTGGCGTCGTCTGCGCGAGA
GCCCCTTCTGCGTCCGTCACGTGCTGCTCCGAGCCCAGAGCCACGGATAC
GTCGAAGGGAGCCAACACAAACTCCCCACCCGATTCAAGACCTCTTACTT
TGACACCTCTGTCTTTGTGCTCCAGAATGGGGCAGGGAGGGAGGCGTGGC
CGGTGACGGAGGAGGCAGTGCGGGAGCTGGAGTGGGCATGTAAGTCCAAG
CATGAGGCAGAGACTGCGGCGAGGAGGGGCGAGGGGGGGAGGAGGATGGA
AGAGGGTGGGAAAGGCGGAGAAAATGAAGAGAAGGTGGAGTTTGAAGTGG
AAAAGAGTGAGGCAAAAGAGCAGGAGCAGCCGATTGCACATGGGCCACAA
GGCGTAGTAACGCGTGGCAAAGAGCAAGACGGTGAGGCCCTGCAAAGGAA
GAAGAGGCGGAGGAGGGAGGAGGAAGAGGAGAGAGGCAAGGAGACAGGAA
TCTAAAAACCCCAGAGTATATTTGATGTATTTATTTGTATGATTAGAAGA
AGAAACAAAGACCACT
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protein sequence of NO03G02460.1

>NO03G02460.1-protein ID=NO03G02460.1-protein|Name=NO03G02460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=635bp
MDALLDEMYKTQVGGMPREGTDEVATATAAAAAVSSKDSDDDDDDDDNDA
QTSLPSPTSPSSSSIWRPDIKPPKDALRHAKARCQGYIRPSPELNLEILR
HNAVGNLTCFFLNKVNRGLEMDLRIPPFERWLFSQHRIDGSDDPILPDPR
LGDEHAKAGRTLLRRELVDGGVSKSSAEKVMSDLNKTAVKLLGQVQRASA
MMGSVSSDLKGRQPLIRVRFDAGRGLYQLQHKATTVTVNQAHYDKLQALH
ARFGREEQQQQQQQQQQQAKCNDVKGQEKNRFHHRLFLLLLRYSSLAGGT
ERGGGFQGAINEEAFDVLLRLFDCRMECFASPLNCRYPRYCSAFEDTDGY
FGSLGSFFSFFPKEGVYEANPPFLPCVIERMAQHMEELLQASERPLGFVV
VIPAWKPEEVQAGEAGKEGGKEEGKEEGKEHPAAVQGKAISIAIAPHYHN
NHKNHQSSRMKKGKKRPKSIYTASGSSWRRLRESPFCVRHVLLRAQSHGY
VEGSQHKLPTRFKTSYFDTSVFVLQNGAGREAWPVTEEAVRELEWACKSK
HEAETAARRGEGGRRMEEGGKGGENEEKVEFEVEKSEAKEQEQPIAHGPQ
GVVTRGKEQDGEALQRKKRRRREEEEERGKETGI*
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Synonyms
Publications