NO03G02030, NO03G02030 (gene) Nannochloropsis oceanica

Overview
NameNO03G02030
Unique NameNO03G02030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length861
Alignment locationchr3:612853..613713 +

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:612853..613713 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009858DUF1415
Homology
BLAST of NO03G02030 vs. NCBI_GenBank
Match: EWM29625.1 (Protein of unknown function DUF1415 [Nannochloropsis gaditana])

HSP 1 Score: 258.1 bits (658), Expect = 3.300e-65
Identity = 135/218 (61.93%), Postives = 164/218 (75.23%), Query Frame = 0
Query:   64 VSSSPASSLLSFPHSSSCPSFLSPKDNTDTDTDDDAAIIARTCAWIHNMVIRTPLCPFAEKVIKDDTVKYVVTRVRKRKEVAVLVLEEALALIGVPETETATTVLIAPYAFVEDFPAFYETERFLEDHLEESPLGEEVLVASFHPQYMFGGGVKDDDPIHYEKRSPYPVFNLLRAQRVWAYADEGLTEKIADKNAEALEELGIKEVRRRFALDKIEVE 282
            +  SP  S +    +SS  S  S   ++     DDAA+IART AWIHNMVIR PLCPFAEKV++D+TV+YVV R R++ ++   VLEEA AL+  PE  TATT+++AP AFVEDF AFYETERFLE  LE S L   VL+A+FHPQY FGGG+ + DPIH+EKRSP+PVFNLLRA+RVWAYA+EGLTEKIAD+N  AL  +GI EVRRRF L + EVE
Sbjct:  165 IGLSPLPSKIVALPASSSTSXXSFNPSSSPSGMDDAAVIARTQAWIHNMVIRIPLCPFAEKVVQDNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDLQHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVWAYANEGLTEKIADRNEAALAAIGIDEVRRRFTLSEKEVE 382          
BLAST of NO03G02030 vs. NCBI_GenBank
Match: WP_020473535.1 (DUF1415 domain-containing protein [Zavarzinella formosa])

HSP 1 Score: 109.8 bits (273), Expect = 1.500e-20
Identity = 71/173 (41.04%), Postives = 98/173 (56.65%), Query Frame = 0
Query:   97 DDAAIIARTCAWIHNMVIRTPLCPFAEKVIKDDTVKYVVTRVRKRKEVAVLVLEEALALIGVPETETATTVLIAPYAFVEDFPAFYETERFLE--DHLEESPLGEEVL-VASFHPQYMFGGGVKDDDPIHYEKRSPYPVFNLLRAQRVWAYA-DEGLTEKIADKNAEALEELG 266
            D A +I  T  WI ++VI   LCPFA +V  D+T++YVV+     + +   +  E   L  VP TE  TTVLI P  F +    F +   FL+  +HL E+   E VL +ASFHPQY F GG K DD  ++  RSPYP+ +LLR + +   A D+   E I ++N E L +LG
Sbjct:    2 DQATVIEETRRWIQSIVIGLNLCPFARRVFNDNTIRYVVSEATDEQSLLTDLATEMNNLATVPRTEVETTVLIHPAVFHD----FLDYNDFLDPAEHLLETLGHEGVLQLASFHPQYQF-GGTKPDDVENHTNRSPYPMLHLLREESITEIADDQEALEAIPERNIETLRKLG 169          
BLAST of NO03G02030 vs. NCBI_GenBank
Match: XP_005713050.1 (unnamed protein product [Chondrus crispus] >CDF33247.1 unnamed protein product [Chondrus crispus])

HSP 1 Score: 109.4 bits (272), Expect = 1.900e-20
Identity = 62/174 (35.63%), Postives = 100/174 (57.47%), Query Frame = 0
Query:   95 TDDDAAIIARTCAWIHNMVIRTPLCPFAEKVIKDDTVKYVVTRVRKRKEVAVLVLEEALALIGVPETETATTVLIAPYAFVEDFPAFYETERFLEDHLE-ESPLGEEVLVASFHPQYMFGGGVKDDDPIHYEKRSPYPVFNLLRAQRVWAYADEGLTEKIADKNAEALEELGIK 268
            T D  ++ AR  AW   +V    LCPFAE V+  +TV+  V +  + + V   V EE   L+     + +T++L+ P    +DF  F+     LED +E +  + +EV++A FHP++ + G   +D  ++++KR+PYPV N LRA+ V  Y  EG T++I ++N E LE L I+
Sbjct:  112 TYDPVSVEARVMAWARIVVCGLNLCPFAEGVLDSNTVRVQVRQASEERGVQAAVAEEISLLLATHPDDMSTSLLVLPAFAEDDFRRFHALCVALEDDIERDEDMVDEVMLACFHPRHEWAGVGDEDAALNFDKRAPYPVINFLRARVVDQYVSEGKTQRILEQNQETLERLFIQ 285          
BLAST of NO03G02030 vs. NCBI_GenBank
Match: CBJ33326.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 105.5 bits (262), Expect = 2.700e-19
Identity = 66/158 (41.77%), Postives = 93/158 (58.86%), Query Frame = 0
Query:   87 PKDNTDTDTDDDAAIIARTCAWIHNMVIRTPLCPFAEKVIKDDT-VKYVVTRVRKRKEVAVLVLEEALALIGVPETETATTVLIAPYAFVEDFPAFYETERFLEDHLE-ESPLGEEVLVASFHPQYMFGGGVKDDDPIHYEKRSPYPVFNLLRAQRVW 243
            P  N   D +DDA II +  AW+ ++V++  LCPFAE V    + V+YVVT      EV    L E   L+     +  TT+LIAP  F+ DF  F +  R+LE+ +E +  L ++VLVA FHP++ F  G++ DD ++YEKRSP+P  NLLR    W
Sbjct:   63 PMANAGGDLEDDARIIRQAKAWVRDVVVKLRLCPFAEAVFNARSGVRYVVTPAETTDEVWREFLLEVDFLMDHDREDVGTTLLIAP-RFLSDFREFNDFCRWLEETIEDDEALVDQVLVACFHPRHAF-HGLEQDDVLNYEKRSPHPTINLLRCCTTW 218          
BLAST of NO03G02030 vs. NCBI_GenBank
Match: WP_019621287.1 (DUF1415 domain-containing protein [Amphritea japonica])

HSP 1 Score: 105.5 bits (262), Expect = 2.700e-19
Identity = 61/170 (35.88%), Postives = 97/170 (57.06%), Query Frame = 0
Query:  105 TCAWIHNMVIRTPLCPFAEKVIKDDTVKYVVTRVRKRKEVAVLVLEEALALIGVPETETATTVLIAPYAFVEDFPAFYETERFLEDHLEESPLGEEVLVASFHPQYMFGGGVKDDDPIHYEKRSPYPVFNLLR-AQRVWAYADEGLTEKIADKNAEALEELGIKEVRRRF 274
            T  W+  MV+   LCPFA  V+KD++++Y +T  R  + +    + E   L+   E E +TT+ I P   +EDF  + +  R  E+ LE++ L   + +ASFHP Y+F  GV +DD  H+  RSP+PVF+++R A+   A       E+I ++N + L ELG + +  RF
Sbjct:   17 TRQWVETMVVGLNLCPFAAPVVKDNSLRYAITDARGSESLVAAFMAEIEQLLAASEKEISTTLFIVPTG-LEDFYDYLDHLRLFEELLEQAGLEGVIQLASFHPGYLF-HGVAEDDLSHWSNRSPWPVFHIIREAEMSRALTHYSNPEQIPERNIKRLRELGREALIERF 184          
BLAST of NO03G02030 vs. NCBI_GenBank
Match: XP_005770456.1 (hypothetical protein EMIHUDRAFT_461298 [Emiliania huxleyi CCMP1516] >XP_005792284.1 hypothetical protein EMIHUDRAFT_423017 [Emiliania huxleyi CCMP1516] >EOD18027.1 hypothetical protein EMIHUDRAFT_461298 [Emiliania huxleyi CCMP1516] >EOD39855.1 hypothetical protein EMIHUDRAFT_423017 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 105.1 bits (261), Expect = 3.600e-19
Identity = 69/180 (38.33%), Postives = 94/180 (52.22%), Query Frame = 0
Query:  102 IARTCAWIHNMVIRTPLCPFAEKVIKDDTVKYVVTRVRKRKEVAVLVLEEALALIGVPETETATTVLIAP--YAFVEDFPAFYETERFLEDHLEESPLGEEVLVASFHPQYMFGGGVKDDDPIHYEKRSPYPVFNLLRAQRVWAYADEGL------TEKIADKNAEALEELGIKEVRRRF 274
            I RT AWI   V+R  LCP+A K    D ++Y V+     + +     EE L L+  PE E ATT+LIAP     + +F + YE    L +  EE  L   V  A FHP + F  G+  D PIH+EKR+P PV NLLR   +    +EGL       ++I++ NA AL+  G   + R F
Sbjct:   25 IYRTRAWIDTAVVRLGLCPYAAKPFHGDRIRYAVSDCTSDEALVASFFEEGLLLLDSPEEELATTMLIAPKYEGGIGEFYSLYEWLTDLLESEEEEVLANGVQPAFFHPAWSF-DGLPADSPIHFEKRAPCPVINLLRRSTLDRTVEEGLRRGVIVNQQISEHNAAALQAEGTPALSRLF 203          
BLAST of NO03G02030 vs. NCBI_GenBank
Match: WP_091354040.1 (DUF1415 domain-containing protein [Amphritea atlantica] >SEQ20378.1 hypothetical protein SAMN03080615_00673 [Amphritea atlantica])

HSP 1 Score: 101.3 bits (251), Expect = 5.200e-18
Identity = 60/170 (35.29%), Postives = 96/170 (56.47%), Query Frame = 0
Query:  105 TCAWIHNMVIRTPLCPFAEKVIKDDTVKYVVTRVRKRKEVAVLVLEEALALIGVPETETATTVLIAPYAFVEDFPAFYETERFLEDHLEESPLGEEVLVASFHPQYMFGGGVKDDDPIHYEKRSPYPVFNLLR-AQRVWAYADEGLTEKIADKNAEALEELGIKEVRRRF 274
            T  W+  MV+   LCPFA  V++D+T++Y VT  ++ + +    L E   L+   E   +TT+ I P   ++DF  + +  R  E+ LE++ L   + +ASFHP Y F  GV +DD  H+  RSP+P F+++R A+   A       E+I ++N + L ELG + + RRF
Sbjct:   17 TREWVETMVVGLNLCPFAAPVVRDNTLRYAVTTAQEGESLVAAFLAEIELLLAADEKTVSTTLFIVPDG-LQDFYDYLDHLRLFEELLEQAGLEGVLQLASFHPAYRF-EGVPEDDLSHWSNRSPWPAFHIIREAEMGRALTHYANPEQIPERNIKLLRELGREGLIRRF 184          
BLAST of NO03G02030 vs. NCBI_GenBank
Match: WP_054339668.1 (DUF1415 domain-containing protein [Neptunomonas antarctica] >SIS39799.1 hypothetical protein SAMN05421760_10125 [Neptunomonas antarctica])

HSP 1 Score: 99.8 bits (247), Expect = 1.500e-17
Identity = 63/176 (35.80%), Postives = 99/176 (56.25%), Query Frame = 0
Query:  101 IIARTCAWIHNMVIRTPLCPFAEKVIKDDTVKYVVTRVRKRKEVAVLVLEEALALIGVPETETATTVLIAPYAFVEDFPAFYETERFLEDHLEESPLGEEVLVASFHPQYMFGGGVKDDDPIHYEKRSPYPVFNLLR---AQRVWAYADEGLTEKIADKNAEALEELGIKEVRRRF 274
            I+A +  W+  +V+   LCPFA  V+++DT++Y VT     + +A   L+E   +    E E ATT++I P A V DF  + +   + ED L +S L     +ASFHP Y+F  GV+ DD  H+  RSP+P+ +++R     RV  + D    E+I ++N + L ELG + +  RF
Sbjct:   14 IVALSRQWVETIVVGLNLCPFAAPVVRNDTLRYAVTDAESMEALASNFLQELNLIQEKEEKEIATTLVIMPRA-VSDFYDYLDLLAYFEDLLAKSGLSGVFQLASFHPAYLF-AGVEPDDLSHWTNRSPFPMVHIIREGQMSRVLTHYDN--PEEIPERNIKLLRELGREGLVERF 185          
BLAST of NO03G02030 vs. NCBI_GenBank
Match: WP_070346794.1 (DUF1415 domain-containing protein [Janthinobacterium lividum] >OFJ47536.1 hypothetical protein BA896_016515 [Janthinobacterium lividum])

HSP 1 Score: 99.4 bits (246), Expect = 2.000e-17
Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 0
Query:   96 DDDAAIIARTCAWIHNMVIRTPLCPFAEKVIKDDTVKYVVTRVRKRKEVAVLVLEEALALIGVPETETATTVLIAPYAFVEDFPAFYETERFLEDHLEESPLGEEVLVASFHPQYMFGGGVKDDDPIHYEKRSPYPVFNLLRAQRVWAYADEGLTE--KIADKNAEALEELGIK 268
            DD+A IIA T  W+   VI   LCPFA+ V     ++YVV      +++  ++++E   L   P  +  TT+LI PY  + DF  + E     +  +E+  L  E+ VASFHP Y F     +DD  +Y  RSPYP  +LLR   + A A E   E  +I DKN   LE LG++
Sbjct:    9 DDNAVIIANTVVWLEKAVIGLNLCPFAKAVHVKQQIRYVVCESSNPEDLLSMLMDELQILADTPPEQIDTTLLIHPYT-LNDFLDYNEFLDVADAAVEDMHLAGELQVASFHPNYQF-AETFEDDISNYTNRSPYPTLHLLREDSI-ARAVEAFPEASEIFDKNIATLENLGVE 179          
BLAST of NO03G02030 vs. NCBI_GenBank
Match: WP_019528730.1 (DUF1415 domain-containing protein [Dasania marina])

HSP 1 Score: 96.3 bits (238), Expect = 1.700e-16
Identity = 61/167 (36.53%), Postives = 96/167 (57.49%), Query Frame = 0
Query:  104 RTCAWIHNMVIRTPLCPFAEKVIKDDTVKYVVTRVRKRKEVAVLVLEEALALIGVPETETATTVLIAPYAFVEDFPAFYETERFLEDHLEESPLGEEVLVASFHPQYMFGGGVKDDDPIHYEKRSPYPVFNLLRAQRV-WAYADEGLTEKIADKNAEALEELGIKEV 270
            +T AW+ + VI+  LCPFA KV+ + +V+  V     ++E+   VL E   L+   E + +T++L+   A + DF  + +   +  D L E+ L   V +A+FHPQY+F GGV +DD  HY  RSPYP+ + +R Q++  A A     E I D N + L+ LG+ +V
Sbjct:    7 QTRAWLTDFVIKLNLCPFASKVLDEGSVRIAVCSSTNQQEMVQQVLAELDLLVQSDEKKLSTSLLVFDQA-LADFYDYLDFADWAHDLLLEAGLEGVVQIATFHPQYLF-GGVAEDDVSHYSNRSPYPMLHFIREQQLAEAIAFHPDPEGIPDANIKHLQSLGLAKV 171          
The following BLAST results are available for this feature:
BLAST of NO03G02030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29625.13.300e-6561.93Protein of unknown function DUF1415 [Nannochlorops... [more]
WP_020473535.11.500e-2041.04DUF1415 domain-containing protein [Zavarzinella fo... [more]
XP_005713050.11.900e-2035.63unnamed protein product [Chondrus crispus] >CDF332... [more]
CBJ33326.12.700e-1941.77conserved unknown protein [Ectocarpus siliculosus][more]
WP_019621287.12.700e-1935.88DUF1415 domain-containing protein [Amphritea japon... [more]
XP_005770456.13.600e-1938.33hypothetical protein EMIHUDRAFT_461298 [Emiliania ... [more]
WP_091354040.15.200e-1835.29DUF1415 domain-containing protein [Amphritea atlan... [more]
WP_054339668.11.500e-1735.80DUF1415 domain-containing protein [Neptunomonas an... [more]
WP_070346794.12.000e-1737.36DUF1415 domain-containing protein [Janthinobacteri... [more]
WP_019528730.11.700e-1636.53DUF1415 domain-containing protein [Dasania marina][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL070nonsL070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR001ncniR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005696NSK005696Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G02030.1NO03G02030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|571942gene_1389Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100050g38gene986Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G02030.1NO03G02030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G02030 ID=NO03G02030|Name=NO03G02030|organism=Nannochloropsis oceanica|type=gene|length=861bp
ATGACTGGGGCCGTCATCCCCGTAGCCCAGCTCCTGAGCCTGCCCTTCCT
CTTCCTCCTACTTGCCGAGGGTTCGCCATTACCATCAGCAGCCTTTGTAC
TCCCGGCACTGTCGCAGGCCAAAAGGCCACGCCCACCCTCAAGGCCCTTC
TCCTCCGATGCACTGATAAAACACGCTCGTTTCATCTTTGTCTCGTCCAG
CCCCGCCTCCTCCCTACTCTCCTTTCCTCACTCGTCATCCTGCCCTTCCT
TCCTCTCACCCAAAGACAACACCGATACCGATACTGACGACGACGCGGCC
ATCATTGCGCGTACTTGCGCCTGGATTCATAACATGGTGATCCGCACCCC
TCTCTGTCCTTTTGCGGAGAAGGTAATAAAAGACGACACCGTAAAATACG
TCGTCACCCGTGTCCGAAAGAGAAAAGAAGTTGCCGTGCTGGTGCTGGAG
GAGGCCCTCGCATTAATTGGGGTCCCTGAGACAGAGACAGCTACCACAGT
CTTGATCGCGCCTTATGCATTTGTTGAGGATTTTCCGGCATTCTACGAGA
CGGAACGGTTCCTGGAAGACCATCTAGAAGAGAGCCCATTGGGGGAGGAA
GTGCTCGTGGCGTCTTTTCACCCTCAGTACATGTTCGGTGGAGGGGTAAA
AGATGATGACCCGATTCATTATGAAAAGCGCTCCCCATATCCTGTGTTTA
ATTTGTTGAGAGCACAAAGGGTGTGGGCGTACGCGGATGAGGGTTTGACA
GAGAAGATCGCTGATAAGAACGCGGAGGCTTTGGAAGAGCTAGGGATAAA
GGAGGTGAGAAGACGGTTTGCATTGGACAAAATAGAGGTGGAGGGAGAAG
GGATAATCTGA
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protein sequence of NO03G02030.1

>NO03G02030.1-protein ID=NO03G02030.1-protein|Name=NO03G02030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=287bp
MTGAVIPVAQLLSLPFLFLLLAEGSPLPSAAFVLPALSQAKRPRPPSRPF
SSDALIKHARFIFVSSSPASSLLSFPHSSSCPSFLSPKDNTDTDTDDDAA
IIARTCAWIHNMVIRTPLCPFAEKVIKDDTVKYVVTRVRKRKEVAVLVLE
EALALIGVPETETATTVLIAPYAFVEDFPAFYETERFLEDHLEESPLGEE
VLVASFHPQYMFGGGVKDDDPIHYEKRSPYPVFNLLRAQRVWAYADEGLT
EKIADKNAEALEELGIKEVRRRFALDKIEVEGEGII*
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Synonyms
Publications