NO03G01930, NO03G01930 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G01930
Unique Name	NO03G01930
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2122
Alignment location	chr3:591583..593704 -

Link to JBrowse

Properties


Property Name	Value
Description	Phytochelatin synthase

Mutants

Expression

Analysis:

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:591583..593704 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0046938	phytochelatin biosynthetic process
GO:0010038	response to metal ion
GO:0046938	phytochelatin biosynthetic process
GO:0010038	response to metal ion

Vocabulary: **Molecular Function**
Term	Definition
GO:0016756	glutathione gamma-glutamylcysteinyltransferase activity
GO:0046872	metal ion binding
GO:0046872	metal ion binding
GO:0016756	glutathione gamma-glutamylcysteinyltransferase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR038765	Papain_like_cys_pep_sf
IPR007719	Phytochelatin_synthase

Homology

[Close]

BLAST of NO03G01930 vs. NCBI_GenBank
Match: EWM29630.1 (phytochelatin synthase [Nannochloropsis gaditana])

HSP 1 Score: 756.1 bits (1951), Expect = 7.900e-215
Identity = 394/567 (69.49%), Postives = 439/567 (77.43%), Query Frame = 0

Query:   33 CVRCFASMAPPR---KDTIFTT-PASTASSSASARATTPFYDGRVTSPSMKRRTGGKVMPVQPQPLASSSPLEAAASAAEPSSPPLTPTPE--VIVHNSAKSAIQSFYRRQLPTSHCVPFSSTEGRRMFQEALAQGGLESYFPLSEQFKTQDDPAFCGLGALTMVLNALAIDPGRTWKGPWRWFDESMLECCEPLEVVRERGICIGKLDCLARCNGATTVLKYGDSTSVEEFRRDVIRTTGGRNAHLHEGEARLCSE-----EACNXXXXXXXXXXXXXXXXXNELLIVGYNRQIMGQTGTGHFSPVGGYHAGRDMALIMDVARFKYPPHWVSVPLLWEAMQTADPETQRSRGYMVVAKGMVSESLLFTIDKTRYEEFEALASWMRMAAMKLPPLMEEEMTR--GIYGGGVEGE-ASARVDHDRLLPLFLESLPESIASMFVTIHESFCLRYSEKHLRSIDTLLGGIEAHPIFVTMGEQHEEHLARFRSVAGRRDVAAEEACCAGKVVSERHVLTILYISMLEWVCQRQGWSIYRLFSAQTVYSPPLQLEVAQLKRKIAAMADEVGP 586
            C+RC ASM+  +    DT  TT P+ +    +S  ++TPF   R  SP + R+    V    P        +E   S+A+ S P      +  V++HNSA S +QSFYRRQLPTSHCVPF+S+EGRR+FQEAL QGGLESYFPLSEQFKTQDDPAFCGLGALTMVLNALAIDPGRTWKGPWRWFDESMLECCEPLEVVRERGIC+GKLDCLARCNGATTVLKYGDST ++EFRRD+IRTTGG     H G     ++                           +LLIVGYNRQ++GQTG+GHFSPVGGYHAGRDMALIMDVARFKYPPHWV VPLLWEAMQT DPETQRSRGYMVVAKGMVSESLLFTIDK+RYEEF+ LASW+R AA +LP LME EMTR  G+ GG   G   +AR+DHDRLLPLFLESLP SIASMFVTIHESFCLRYSEKHL+SI  LLG IEAHPI+ TMG QHE  L RFR+   RR VAAEEACCAGKVV+ERHVLTILYISMLEWVCQRQ WSI+ LF AQ ++SPPLQLEVAQLKRKIAAMADE+GP
Sbjct:   23 CLRCLASMSAHQHSSPDTAATTSPSVSFYEQSSTPSSTPF--SREVSPPVSRKNDMGVTEALPSDFRQH--VEPETSSAQVSHPHSASEGDKAVVIHNSANSIVQSFYRRQLPTSHCVPFNSSEGRRLFQEALMQGGLESYFPLSEQFKTQDDPAFCGLGALTMVLNALAIDPGRTWKGPWRWFDESMLECCEPLEVVRERGICLGKLDCLARCNGATTVLKYGDSTGLDEFRRDIIRTTGGGREACHGGGKEGATDFSRVPGTLARAEHTNGSEQTHMQYEQQDLLIVGYNRQVLGQTGSGHFSPVGGYHAGRDMALIMDVARFKYPPHWVPVPLLWEAMQTVDPETQRSRGYMVVAKGMVSESLLFTIDKSRYEEFKDLASWIRKAADRLPLLMEAEMTRNTGVPGGESGGTVGAARLDHDRLLPLFLESLPASIASMFVTIHESFCLRYSEKHLKSIGDLLGAIEAHPIYETMGAQHEARLDRFRTPCSRRHVAAEEACCAGKVVNERHVLTILYISMLEWVCQRQKWSIFGLFPAQALHSPPLQLEVAQLKRKIAAMADEMGP 585

[Close]

BLAST of NO03G01930 vs. NCBI_GenBank
Match: EWM22234.1 (phytochelatin synthase [Nannochloropsis gaditana])

HSP 1 Score: 317.8 bits (813), Expect = 7.200e-83
Identity = 172/379 (45.38%), Postives = 220/379 (58.05%), Query Frame = 0

Query:   99 PLEAAASAAEPSSPPLTPTPEVIVHNSAKSAI-QSFYRRQLPTSHCVPFSSTEGRRMFQEALAQGGLESYFPLSEQFKTQDDPAFCGLGALTMVLNALAIDPGRTWKGPWRWFDESMLECCEPLEVVRERGICIGKLDCLARCNGATTVLKYGDSTSVEEFRRDVIRTT------------GGRNAHLHEGEARLCSEEACNXXXXXXXXXXXXXXXXXNELLIVGYNRQIMGQTGTGHFSPVGGYHAGRDMALIMDVARFKYPPHWVSVPLLWEAMQTADPETQRSRGYMVVAKGMVSESLLFTIDKTRYEEFEALASWMRMAAMKLPPLMEEEMTRGIYGGGVEGEASARVDHDRL----LPLFLESLPESIASMFV 461
            P  +  S ++P +   +P P    H S+ + + ++F+RR LP   CV  S  EGR +F EAL  G +E + PL E F TQ DPAFCGLGALTMVLNAL IDPGRTWKGPWRWFDES+L+CC PL+VVR  GI +    CLA+CNGAT+ L+YGD   ++ FR DV R T            G   A    GE  +  +E                     E ++  Y+R  +GQTG GHFSPVGGYHAGRD+ LI+DVARFKYPPHWV +PLL  A+Q  DP T  +RGY+++ +   S + LFT+D  R+ ++  L  W+      L    EE  T  + GGG  GE   R  H  L       FLE+LPE +AS+ V
Sbjct:   67 PSRSTGSLSKPHAD--SPLPSAHPHGSSPTRLSRTFHRRPLPADSCVALSGREGRALFNEALGAGDMECFLPLIEHFHTQSDPAFCGLGALTMVLNALQIDPGRTWKGPWRWFDESLLDCCAPLDVVRAEGITLANAHCLAQCNGATSRLQYGDRVPLQAFREDVRRVTSASPAPPSFSPPGTSGATAKRGELVVGGKEVAK-------GHSEGGGGFGGEFMLCAYSRAALGQTGDGHFSPVGGYHAGRDLVLILDVARFKYPPHWVPLPLLHAALQPPDPSTGTARGYLLLGRHPGSAAWLFTLDPDRFGDWACLRDWL------LAQHWEEAQT-SMRGGGRVGE-GGRAPHFDLTEDSFRRFLETLPERVASLVV 428

[Close]

BLAST of NO03G01930 vs. NCBI_GenBank
Match: AOV94288.1 (phytochelatin synthase [Brassica napus])

HSP 1 Score: 284.3 bits (726), Expect = 8.800e-73
Identity = 153/403 (37.97%), Postives = 232/403 (57.57%), Query Frame = 0

Query:  129 AIQSFYRRQLPTSHCVPFSSTEGRRMFQEALAQGGLESYFPLSEQFKTQDDPAFCGLGALTMVLNALAIDPGRTWKGPWRWFDESMLECCEPLEVVRERGICIGKLDCLARCNGATTVLKYGDSTSVEEFRRDVIRTTGGRNAHLHEGEARLCSEEACNXXXXXXXXXXXXXXXXXNELLIVGYNRQIMGQTGTGHFSPVGGYHAGRDMALIMDVARFKYPPHWVSVPLLWEAMQTADPETQRSRGYMVVAKGMVSESLLFTIDKTRYEEFEALASWMRMAAMKLPPLMEEEMTRGIYGGGVEGEASARVDH-DRLLPLFLESLPESIASMFVTIHESFCLRYSEKHLRSIDTLLGGIEAHPIFVTMGEQHE----EHLARFRSVAGRRD---VAAEEACCAG 524
            A+ S YRR LP+   + FSS+EG+++F EAL +G +E +F L   F+TQ +PA+CGL +L++VLNAL+IDPGR WKGPWRWFDESML+CCEPLEVV+E+GI  GK+ CLA C+GA       + T++++FR+ V++ +   N H                                   +I  Y+R +  QTG+GHFSP+GGY+A RDMALI+DVARFKYPPHWV + LLWEAM + D  T + RG+M++++      LL+T+            SW+ +A       ++E++ R +        +S +VD  +++L +  +SLP +  +    + E      ++++L + +     ++     V + E HE    +H+++F S  G  D    AA +ACC G
Sbjct:    2 AMASLYRRSLPSPPAIDFSSSEGKKIFNEALQKGTMEGFFRLISYFQTQSEPAYCGLASLSVVLNALSIDPGRKWKGPWRWFDESMLDCCEPLEVVKEKGISFGKVVCLAHCSGAKVEAFRTNQTTIDDFRKLVMKCSTSENCH-----------------------------------MISTYHRGVFKQTGSGHFSPIGGYNAERDMALILDVARFKYPPHWVPLKLLWEAMDSIDDSTGKRRGFMLISRPHREPGLLYTLSCKD-------ESWISIA-----KYLKEDVPRLV--------SSQQVDSVEKILSVVFKSLPSNFNTFIRWVAELRIAEVTKQNLSAEEKSRLNLKQ----VVLKEVHETELFKHISKFLSTVGYEDSLTYAAAKACCQG 345

[Close]

BLAST of NO03G01930 vs. NCBI_GenBank
Match: BAF18448.1 (Os06g0102300 [Oryza sativa Japonica Group] >BAS95704.1 Os06g0102300 [Oryza sativa Japonica Group])

HSP 1 Score: 283.9 bits (725), Expect = 1.200e-72
Identity = 137/289 (47.40%), Postives = 180/289 (62.28%), Query Frame = 0

Query:  128 SAIQSFYRRQLPTSHCVPFSSTEGRRMFQEALAQGGLESYFPLSEQFKTQDDPAFCGLGALTMVLNALAIDPGRTWKGPWRWFDESMLECCEPLEVVRERGICIGKLDCLARCNGATTVLKYGDSTSVEEFRRDVIRTTGGRNAHLHEGEARLCSEEACNXXXXXXXXXXXXXXXXXNELLIVGYNRQIMGQTGTGHFSPVGGYHAGRDMALIMDVARFKYPPHWVSVPLLWEAMQTADPETQRSRGYMVVAKGMVSESLLFTIDKTRYEEFEALASWMRMAAMKLPPL 417
            +A+ S YRR LP+   V F+S EG+R+F EAL  G L+ +F L   F+TQ +PAFCGL +L++VLNALAIDPGR WKGPWRWFDESML+CCEPL+ V+  GI   KL CLA C GA       D +++ +FR  ++R+   ++ H                                   LI  Y+R+   QTGTGHFSP+GGYHAG+DMALI+DVARFKYPPHWV +PLLWEAM T D  T   RG+M++++   + SLL+T+   R  E +A  +W R  A K+ P+
Sbjct:    2 AAMASLYRRVLPSPPAVEFASEEGKRLFSEALESGTLQGFFNLISVFQTQSEPAFCGLASLSVVLNALAIDPGRQWKGPWRWFDESMLDCCEPLDKVKAEGITFAKLACLAHCAGANVRSFRADQSTIHDFRHHLVRSASSQDCH-----------------------------------LIASYHRKPFKQTGTGHFSPIGGYHAGQDMALILDVARFKYPPHWVPLPLLWEAMNTTDDATGLLRGFMLISRHTAAPSLLYTVLLCRVAEMKAGKAW-RSIAWKMYPI 254

[Close]

BLAST of NO03G01930 vs. NCBI_GenBank
Match: XP_018484828.1 (PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1 [Raphanus sativus])

HSP 1 Score: 283.9 bits (725), Expect = 1.200e-72
Identity = 153/403 (37.97%), Postives = 230/403 (57.07%), Query Frame = 0

Query:  129 AIQSFYRRQLPTSHCVPFSSTEGRRMFQEALAQGGLESYFPLSEQFKTQDDPAFCGLGALTMVLNALAIDPGRTWKGPWRWFDESMLECCEPLEVVRERGICIGKLDCLARCNGATTVLKYGDSTSVEEFRRDVIRTTGGRNAHLHEGEARLCSEEACNXXXXXXXXXXXXXXXXXNELLIVGYNRQIMGQTGTGHFSPVGGYHAGRDMALIMDVARFKYPPHWVSVPLLWEAMQTADPETQRSRGYMVVAKGMVSESLLFTIDKTRYEEFEALASWMRMAAMKLPPLMEEEMTRGIYGGGVEGEASARVDH-DRLLPLFLESLPESIASMFVTIHESFCLRYSEKHLRSIDTLLGGIEAHPIFVTMGEQHE----EHLARFRSVAGRRD---VAAEEACCAG 524
            A+ S YRR LP+   + FSS EG+++F EAL +G +E +F L   F+TQ +PA+CGL +L++VLNAL+IDPGR WKGPWRWFDESML+CCEPLEVV+E+GI  GK+ CLA C+GA       + T++++FR+ V++ +   N H                                   +I  Y+R +  QTG+GHFSP+GGY+A RDMALI+DVARFKYPPHWV + LLWEAM + D  T + RG+M++++      LL+T+            SW+ +A       ++E++ R +        +S  VD  +++L +  +SLP +  +    + E      ++++L + +     ++     V + E HE    +H+++F S  G  D    AA +ACC G
Sbjct:    2 AMASLYRRSLPSPPAIDFSSAEGKKIFNEALQKGTMEGFFRLISYFQTQSEPAYCGLASLSVVLNALSIDPGRKWKGPWRWFDESMLDCCEPLEVVKEKGISFGKVVCLAHCSGAKVEAFRTNQTTIDDFRKFVMKCSTSENCH-----------------------------------IISTYHRGVFKQTGSGHFSPIGGYNAERDMALILDVARFKYPPHWVPIKLLWEAMDSIDDSTGKRRGFMLISRPHREPGLLYTLSCKD-------ESWISIA-----KYLKEDVPRLV--------SSQHVDSVEKILSVVFKSLPSNFNTFIRWVAEIRIAEDTKQNLSAEEKSRLNLKQ----VVLKEVHETELFKHISKFLSTVGYEDSLTYAAAKACCQG 345

[Close]

BLAST of NO03G01930 vs. NCBI_GenBank
Match: CDY54482.1 (BnaCnng27040D [Brassica napus])

HSP 1 Score: 283.5 bits (724), Expect = 1.500e-72
Identity = 153/403 (37.97%), Postives = 231/403 (57.32%), Query Frame = 0

Query:  129 AIQSFYRRQLPTSHCVPFSSTEGRRMFQEALAQGGLESYFPLSEQFKTQDDPAFCGLGALTMVLNALAIDPGRTWKGPWRWFDESMLECCEPLEVVRERGICIGKLDCLARCNGATTVLKYGDSTSVEEFRRDVIRTTGGRNAHLHEGEARLCSEEACNXXXXXXXXXXXXXXXXXNELLIVGYNRQIMGQTGTGHFSPVGGYHAGRDMALIMDVARFKYPPHWVSVPLLWEAMQTADPETQRSRGYMVVAKGMVSESLLFTIDKTRYEEFEALASWMRMAAMKLPPLMEEEMTRGIYGGGVEGEASARVDH-DRLLPLFLESLPESIASMFVTIHESFCLRYSEKHLRSIDTLLGGIEAHPIFVTMGEQHE----EHLARFRSVAGRRD---VAAEEACCAG 524
            A+ S YRR LP+   + FSS+EG+++F EAL +G +E +F L   F+TQ +PA+CGL +L++VLNAL+IDPGR WKGPWRWFDESML+CCEPLEVV+E+GI  GK+ CLA C+GA       + T++++FR+ V++ +   N H                                   +I  Y+R +  QTG+GHFSP+GGY+A RDMALI+DVARFKYPPHWV + LLWEAM + D  T + RG+M++++      LL+T+            SW+ +A       ++E++ R +        +S  VD  +++L +  +SLP +  +    + E      ++++L + +     ++     V + E HE    +H+++F S  G  D    AA +ACC G
Sbjct:    2 AMASLYRRSLPSPPAIDFSSSEGKKIFNEALQKGTMEGFFRLISYFQTQSEPAYCGLASLSVVLNALSIDPGRKWKGPWRWFDESMLDCCEPLEVVKEKGISFGKVVCLAHCSGAKVEAFRTNQTTIDDFRKFVMKCSTSENCH-----------------------------------MISTYHRGVFKQTGSGHFSPIGGYNAERDMALILDVARFKYPPHWVPLKLLWEAMDSIDDSTGKRRGFMLISRPHREPGLLYTLSCKD-------ESWISIA-----KYLKEDVPRLV--------SSQHVDSVEKILSVVFKSLPSNFNTFIRWVAELRIAEDTKQNLSAEEKSRLNLKQ----VVLKEVHETELFKHISKFLSTVGYEDSLTYAAAKACCQG 345

[Close]

BLAST of NO03G01930 vs. NCBI_GenBank
Match: CAC37692.1 (phytochelatin synthase [Brassica juncea] >CDY22312.1 BnaA06g36340D [Brassica napus])

HSP 1 Score: 283.5 bits (724), Expect = 1.500e-72
Identity = 153/403 (37.97%), Postives = 232/403 (57.57%), Query Frame = 0

Query:  129 AIQSFYRRQLPTSHCVPFSSTEGRRMFQEALAQGGLESYFPLSEQFKTQDDPAFCGLGALTMVLNALAIDPGRTWKGPWRWFDESMLECCEPLEVVRERGICIGKLDCLARCNGATTVLKYGDSTSVEEFRRDVIRTTGGRNAHLHEGEARLCSEEACNXXXXXXXXXXXXXXXXXNELLIVGYNRQIMGQTGTGHFSPVGGYHAGRDMALIMDVARFKYPPHWVSVPLLWEAMQTADPETQRSRGYMVVAKGMVSESLLFTIDKTRYEEFEALASWMRMAAMKLPPLMEEEMTRGIYGGGVEGEASARVDH-DRLLPLFLESLPESIASMFVTIHESFCLRYSEKHLRSIDTLLGGIEAHPIFVTMGEQHE----EHLARFRSVAGRRD---VAAEEACCAG 524
            A+ S YRR LP+   + FSS+EG+++F EAL +G +E +F L   F+TQ +PA+CGL +L++VLNAL+IDPGR WKGPWRWFDESML+CCEPLEVV+E+GI  GK+ CLA C+GA       + T++++FR+ V++ +   N H                                   +I  Y+R +  QTG+GHFSP+GGY+A RDMALI+DVARFKYPPHWV + LLWEAM + D  T + RG+M++++      LL+T+            SW+ +A       ++E++ R +        +S +VD  +++L +  +SLP +  +    + E      ++++L + +     ++     V + E HE    +H+++F S  G  D    AA +ACC G
Sbjct:    2 AMASLYRRSLPSPPAIDFSSSEGKKIFNEALQKGTMEGFFRLISYFQTQSEPAYCGLASLSVVLNALSIDPGRKWKGPWRWFDESMLDCCEPLEVVKEKGISFGKVVCLAHCSGAKVEAFRTNQTTIDDFRKLVMKCSTSENCH-----------------------------------MISTYHRGVFKQTGSGHFSPIGGYNAERDMALILDVARFKYPPHWVPLKLLWEAMDSIDDSTGKRRGFMLISRPHREPGLLYTLSCKD-------ESWISIA-----KYLKEDVPRLV--------SSQQVDSVEKILSVVFKSLPSNFNTFIRWVAELRIAEDTKQNLSAEEKSRLNLKQ----VVLKEVHETELFKHISKFLSTVGYEDSLTYAAAKACCQG 345

[Close]

BLAST of NO03G01930 vs. NCBI_GenBank
Match: XP_013598130.1 (PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1 [Brassica oleracea var. oleracea])

HSP 1 Score: 283.5 bits (724), Expect = 1.500e-72
Identity = 153/403 (37.97%), Postives = 231/403 (57.32%), Query Frame = 0

Query:  129 AIQSFYRRQLPTSHCVPFSSTEGRRMFQEALAQGGLESYFPLSEQFKTQDDPAFCGLGALTMVLNALAIDPGRTWKGPWRWFDESMLECCEPLEVVRERGICIGKLDCLARCNGATTVLKYGDSTSVEEFRRDVIRTTGGRNAHLHEGEARLCSEEACNXXXXXXXXXXXXXXXXXNELLIVGYNRQIMGQTGTGHFSPVGGYHAGRDMALIMDVARFKYPPHWVSVPLLWEAMQTADPETQRSRGYMVVAKGMVSESLLFTIDKTRYEEFEALASWMRMAAMKLPPLMEEEMTRGIYGGGVEGEASARVDH-DRLLPLFLESLPESIASMFVTIHESFCLRYSEKHLRSIDTLLGGIEAHPIFVTMGEQHE----EHLARFRSVAGRRD---VAAEEACCAG 524
            A+ S YRR LP+   + FSS+EG+++F EAL +G +E +F L   F+TQ +PA+CGL +L++VLNAL+IDPGR WKGPWRWFDESML+CCEPLEVV+E+GI  GK+ CLA C+GA       + T++++FR+ V++ +   N H                                   +I  Y+R +  QTG+GHFSP+GGY+A RDMALI+DVARFKYPPHWV + LLWEAM + D  T + RG+M++++      LL+T+            SW+ +A       ++E++ R +        +S  VD  +++L +  +SLP +  +    + E      ++++L + +     ++     V + E HE    +H+++F S  G  D    AA +ACC G
Sbjct:   58 AMASLYRRSLPSPPAIDFSSSEGKKIFNEALQKGTMEGFFRLISYFQTQSEPAYCGLASLSVVLNALSIDPGRKWKGPWRWFDESMLDCCEPLEVVKEKGISFGKVVCLAHCSGAKVEAFRTNQTTIDDFRKFVMKCSTSENCH-----------------------------------MISTYHRGVFKQTGSGHFSPIGGYNAERDMALILDVARFKYPPHWVPLKLLWEAMDSIDDSTGKRRGFMLISRPHREPGLLYTLSCKD-------ESWISIA-----KYLKEDVPRLV--------SSQHVDSVEKILSVVFKSLPSNFNTFIRWVAELRIAEDTKQNLSAEEKSRLNLKQ----VVLKEVHETELFKHISKFLSTVGYEDSLTYAAAKACCQG 401

[Close]

BLAST of NO03G01930 vs. NCBI_GenBank
Match: AOV94290.1 (phytochelatin synthase [Brassica napus])

HSP 1 Score: 283.5 bits (724), Expect = 1.500e-72
Identity = 153/403 (37.97%), Postives = 232/403 (57.57%), Query Frame = 0

Query:  129 AIQSFYRRQLPTSHCVPFSSTEGRRMFQEALAQGGLESYFPLSEQFKTQDDPAFCGLGALTMVLNALAIDPGRTWKGPWRWFDESMLECCEPLEVVRERGICIGKLDCLARCNGATTVLKYGDSTSVEEFRRDVIRTTGGRNAHLHEGEARLCSEEACNXXXXXXXXXXXXXXXXXNELLIVGYNRQIMGQTGTGHFSPVGGYHAGRDMALIMDVARFKYPPHWVSVPLLWEAMQTADPETQRSRGYMVVAKGMVSESLLFTIDKTRYEEFEALASWMRMAAMKLPPLMEEEMTRGIYGGGVEGEASARVDH-DRLLPLFLESLPESIASMFVTIHESFCLRYSEKHLRSIDTLLGGIEAHPIFVTMGEQHE----EHLARFRSVAGRRD---VAAEEACCAG 524
            A+ S YRR LP+   + FSS+EG+++F EAL +G +E +F L   F+TQ +PA+CGL +L++VLNAL+IDPGR WKGPWRWFDESML+CCEPLEVV+E+GI  GK+ CLA C+GA       + T++++FR+ V++ +   N H                                   +I  Y+R +  QTG+GHFSP+GGY+A RDMALI+DVARFKYPPHWV + LLWEAM + D  T + RG+M++++      LL+T+            SW+ +A       ++E++ R +        +S +VD  +++L +  +SLP +  +    + E      ++++L + +     ++     V + E HE    +H+++F S  G  D    AA +ACC G
Sbjct:    2 AMASLYRRSLPSPPAIDFSSSEGKKIFNEALQKGTMEGFFRLISYFQTQSEPAYCGLASLSVVLNALSIDPGRKWKGPWRWFDESMLDCCEPLEVVKEKGISFGKVVCLAHCSGAKVEAFRTNQTTIDDFRKLVMKCSTSENCH-----------------------------------IISTYHRGVFKQTGSGHFSPIGGYNAERDMALILDVARFKYPPHWVPLKLLWEAMDSIDDSTGKRRGFMLISRPHREPGLLYTLSCKD-------ESWISIA-----KYLKEDVPRLV--------SSQQVDSVEKILSVVFKSLPSNFNTFIRWVAELRIAEDTKQNLSAEEKSRLNLKQ----VVLKEVHETELFKHISKFLSTVGYEDSLTYAAAKACCQG 345

[Close]

BLAST of NO03G01930 vs. NCBI_GenBank
Match: BAB85602.1 (phytochelatin synthase 1 [Brassica juncea])

HSP 1 Score: 283.1 bits (723), Expect = 2.000e-72
Identity = 153/403 (37.97%), Postives = 229/403 (56.82%), Query Frame = 0

Query:  129 AIQSFYRRQLPTSHCVPFSSTEGRRMFQEALAQGGLESYFPLSEQFKTQDDPAFCGLGALTMVLNALAIDPGRTWKGPWRWFDESMLECCEPLEVVRERGICIGKLDCLARCNGATTVLKYGDSTSVEEFRRDVIRTTGGRNAHLHEGEARLCSEEACNXXXXXXXXXXXXXXXXXNELLIVGYNRQIMGQTGTGHFSPVGGYHAGRDMALIMDVARFKYPPHWVSVPLLWEAMQTADPETQRSRGYMVVAKGMVSESLLFTIDKTRYEEFEALASWMRMAAMKLPPLMEEEMTRGIYGGGVEGEASARVDH-DRLLPLFLESLPESIASMFVTIHESFCLRYSEKHLRSIDTLLGGIEAHPIFVTMGEQHE----EHLARFRSVAGRRD---VAAEEACCAG 524
            A+ S YRR LP+   + FSS EG+++F EAL +G +E +F L   F+TQ +PA+CGL +L++VLNAL+IDPGR WKGPWRWFDESML+CCEPLE V+E+GI  GK+ CLA C+GA       + T++++FR+ V++ +   N H                                   +I  Y+R +  QTG+GHFSP+GGY+A RDMALI+DVARFKYPPHWV + LLWEAM + D  T + RG+M++++      LL+T+            SW+ +A       ++E++ R +        +S  VD  D++L +  +SLP +  +    + E      ++++L + +     ++     V + E HE    +H+++F S  G  D    AA +ACC G
Sbjct:    2 AMASLYRRSLPSPPAIDFSSAEGKKIFNEALQKGTMEGFFRLISYFQTQSEPAYCGLASLSVVLNALSIDPGRKWKGPWRWFDESMLDCCEPLEAVKEKGISFGKVVCLAHCSGAKVEAFRTNQTTIDDFRKFVMKCSTSENCH-----------------------------------MISTYHRGVFKQTGSGHFSPIGGYNAERDMALILDVARFKYPPHWVPLKLLWEAMDSIDDSTGKRRGFMLISRPHREPGLLYTLSCKD-------ESWISIA-----KYLKEDVPRLV--------SSQHVDSVDKILSVVFKSLPSNFNTFIRWVAEVRIAEDTKQNLSAEEKSRLNLKQ----VVLKEVHETELFKHISKFLSTVGYEDSLTYAAAKACCQG 345

The following BLAST results are available for this feature:

BLAST of NO03G01930 vs. NCBI_GenBank

BLAST of NO03G01930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM29630.1	7.900e-215	69.49	phytochelatin synthase [Nannochloropsis gaditana]	[more]
EWM22234.1	7.200e-83	45.38	phytochelatin synthase [Nannochloropsis gaditana]	[more]
AOV94288.1	8.800e-73	37.97	phytochelatin synthase [Brassica napus]	[more]
BAF18448.1	1.200e-72	47.40	Os06g0102300 [Oryza sativa Japonica Group] >BAS957...	[more]
XP_018484828.1	1.200e-72	37.97	PREDICTED: glutathione gamma-glutamylcysteinyltran...	[more]
CDY54482.1	1.500e-72	37.97	BnaCnng27040D [Brassica napus]	[more]
CAC37692.1	1.500e-72	37.97	phytochelatin synthase [Brassica juncea] >CDY22312...	[more]
XP_013598130.1	1.500e-72	37.97	PREDICTED: glutathione gamma-glutamylcysteinyltran...	[more]
AOV94290.1	1.500e-72	37.97	phytochelatin synthase [Brassica napus]	[more]
BAB85602.1	2.000e-72	37.97	phytochelatin synthase 1 [Brassica juncea]	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL070	nonsL070	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR000	ncniR000	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR053	ngnoR053	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK005709	NSK005709	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO03G01930.1	NO03G01930.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|571914	gene_1378	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100050g25	gene996	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO03G01930.1	NO03G01930.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO03G01930 ID=NO03G01930|Name=NO03G01930|organism=Nannochloropsis oceanica|type=gene|length=2122bp
GCCTTCTGTCCTGCCCTGGCACACGCATGGCCACGCGCGGGGCCGTGCGC
CTCAAGCAAGTTTTGTTCGTTTATCTTGTTCCTTTCGCAGCAGGTGGCTC
ATTCTCCCGTCCGACCCACCCCCGACCCTCTTTCTGACCAGGAGGCTATC
TTCCTGCCTCTGCCGAAGGCGCACACACGCCTTCTCCACGCGCCGCTGCC
TTTCTTCGTCACAGGCACACGAACAAGGACATCCTACACCCCGGGGCACT
ATGAACATGACCCCCCCACGCCATGTCATGCGACAACTTCTTCTTGCCCG
GCAGGCAGTGTCCTCGGCCTCGGCCATGGGAGCCAGCCAACAAGGATGCG
TGCGCTGCTTTGCCAGCATGGCTCCACCACGCAAGGACACCATTTTTACC
ACCCCCGCGAGCACAGCTAGCAGCAGCGCTTCAGCGAGAGCCACCACCCC
CTTCTACGATGGACGCGTCACCAGTCCAAGCATGAAGCGAAGAACTGGCG
GCAAGGTCATGCCGGTCCAACCACAACCTTTAGCATCATCTTCACCCCTA
GAAGCAGCAGCATCAGCAGCAGAGCCTTCTTCTCCCCCCCTCACTCCTAC
CCCAGAAGTTATCGTCCATAACAGCGCCAAGTCTGCCATTCAAAGTTTCT
ACCGTCGACAGCTGCCCACCTCCCACTGCGTGCCTTTCAGCTCAACGGAA
GGGCGACGCATGTTTCAAGAGGCCTTGGCCCAGGGAGGGTTGGAGAGTTA
TTTTCCTTTGTCGGAGCAATTTAAGACACAGGACGACCCCGCTTTTTGTG
GATTAGGGGCGTTGACGATGGTATTAAATGCTTTGGCGATTGACCCGGGA
AGGACATGGAAGGGTCCCTGGAGGTGGTTCGATGAGAGCATGTTGGAGTG
TTGTGAACCGTTGGAGGTGGTAAGGGAGAGAGGGATATGTATCGGGAAAT
TGGACTGTCTGGCAAGATGTAACGGTGCAACGACTGTGTTGAAATATGGG
GACTCGACGAGCGTGGAGGAGTTTCGGCGGGATGTGATTCGGACGACTGG
TGGGAGGAATGCGCACTTACATGAGGGCGAGGCGAGGTTGTGTTCGGAGG
AGGCATGTAATGGAAGCCACCATCATCACGAACAGGAGCAACACCATGTA
CAGCAGGGACAAAACGAGCTCCTGATCGTCGGCTACAACCGTCAAATTAT
GGGTCAGACCGGCACAGGACATTTCTCCCCGGTAGGAGGGTATCATGCAG
GGAGGGATATGGCCTTGATCATGGACGTCGCTCGCTTCAAATACCCTCCT
CATTGGGTGTCAGTCCCCCTGCTGTGGGAGGCCATGCAAACAGCCGATCC
TGAAACACAGCGTTCACGGGGATATATGGTCGTGGCCAAGGGGATGGTGT
CAGAGAGTCTGTTGTTCACGATTGATAAGACGAGGTATGAGGAATTCGAG
GCCTTGGCCTCGTGGATGCGCATGGCGGCGATGAAGCTGCCGCCGTTGAT
GGAGGAGGAGATGACGAGGGGGATATATGGTGGAGGTGTGGAAGGAGAGG
CATCTGCGAGAGTGGATCATGATAGATTGTTGCCATTGTTTTTGGAAAGT
TTGCCTGAGAGCATCGCGAGCATGTTTGTGACTATTCATGAGTCGTTTTG
TCTGAGATATAGTGAGAAGCACCTGCGGTCGATAGATACGTTGTTGGGAG
GGATTGAGGCACACCCCATTTTTGTAACCATGGGGGAGCAGCATGAAGAG
CATTTAGCCCGATTTCGTTCGGTGGCGGGACGAAGGGATGTGGCGGCGGA
GGAGGCGTGTTGTGCAGGGAAGGTGGTGAGTGAGCGGCATGTGCTCACGA
TTTTATATATCAGTATGTTGGAGTGGGTGTGTCAGCGACAGGGGTGGTCG
ATTTACCGTTTGTTTTCGGCGCAAACTGTGTATAGCCCACCGTTGCAGCT
GGAAGTGGCGCAGCTCAAGAGGAAGATTGCCGCCATGGCTGATGAGGTCG
GGCCAGGGAAGTAAAATAGGGAGTGTATGTGCATGCATGTATTAGAGGGA
CAAGGCACATTTTAACCAAGGTGTCAGCGCGAACCATGGGTTGAAAGTAA
AACGACTAGTGTTGTGGACTGA

protein sequence of NO03G01930.1

>NO03G01930.1-protein ID=NO03G01930.1-protein|Name=NO03G01930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=588bp
MNMTPPRHVMRQLLLARQAVSSASAMGASQQGCVRCFASMAPPRKDTIFT
TPASTASSSASARATTPFYDGRVTSPSMKRRTGGKVMPVQPQPLASSSPL
EAAASAAEPSSPPLTPTPEVIVHNSAKSAIQSFYRRQLPTSHCVPFSSTE
GRRMFQEALAQGGLESYFPLSEQFKTQDDPAFCGLGALTMVLNALAIDPG
RTWKGPWRWFDESMLECCEPLEVVRERGICIGKLDCLARCNGATTVLKYG
DSTSVEEFRRDVIRTTGGRNAHLHEGEARLCSEEACNGSHHHHEQEQHHV
QQGQNELLIVGYNRQIMGQTGTGHFSPVGGYHAGRDMALIMDVARFKYPP
HWVSVPLLWEAMQTADPETQRSRGYMVVAKGMVSESLLFTIDKTRYEEFE
ALASWMRMAAMKLPPLMEEEMTRGIYGGGVEGEASARVDHDRLLPLFLES
LPESIASMFVTIHESFCLRYSEKHLRSIDTLLGGIEAHPIFVTMGEQHEE
HLARFRSVAGRRDVAAEEACCAGKVVSERHVLTILYISMLEWVCQRQGWS
IYRLFSAQTVYSPPLQLEVAQLKRKIAAMADEVGPGK*

Synonyms

Publications