NO03G01870, NO03G01870 (gene) Nannochloropsis oceanica

Overview
NameNO03G01870
Unique NameNO03G01870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2869
Alignment locationchr3:576298..579166 +

Link to JBrowse

Properties
Property NameValue
DescriptionPyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:576298..579166 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR023753Pyr_nucl-diS_OxRdtase_FAD/NAD
Homology
BLAST of NO03G01870 vs. NCBI_GenBank
Match: XP_005704866.1 (NADH dehydrogenase isoform 2 [Galdieria sulphuraria] >EME28346.1 NADH dehydrogenase isoform 2 [Galdieria sulphuraria])

HSP 1 Score: 421.8 bits (1083), Expect = 3.700e-114
Identity = 222/514 (43.19%), Postives = 308/514 (59.92%), Query Frame = 0
Query:  100 ERPYFQFLSEKAVTVLDDTYLSLKESWTAPSPSDFRKSAKNLNFVKGTRQRIVVLGTGWGAHAFLQSVDALKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRNVNPYADYLEATCTGVNAAKKSITCQSVICEGNSCDIEEFELSYDMLLVAVGATTNTYGIPGVKEHCHFLKQINDAVKLRTSIGNAFERANLPGLTDAQRKQALTFVVVGAGPTGVEFTAELRDFVEDDVPKFYPHLLPFVRIKLVEASDRVLMMFDGALQAEAIKRLTEAPQKLVERGLISKDMTQVLLKVGVKEVRNREIVLSDNSTIPYGLAVWAAGNGPLPLVLNLIKQSPEQEEKQGFGRGRLVTDEWMRVKGVDGVFSIGDCCVIDDKPLPANAQAASQQGYFLGRQLSKNIDFSRPIPERVGPVTTPGEFLSVGEKRENGKIYAKGFQFLNLGTLAYTGGDSALAQIAVDKAAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRF 614
            E  +F  +  + V  +DD  +    ++  P      K           +  +V+LGTGW AH+ ++ +D +KY+V VVSPRN+ LFTPML  +AVGTVEF SI E  R  NP+ DY EA C  V+  K+   C+S I      +  +F++ YD L++AVGA TNT+G PGV+EHC+FLK+I+DA  LR +I   FE A+ P ++  ++ + L+FVVVG GPTG EF AEL DF+  D+ K+YP L   V++ L+++ D +L  FD  LQ +A++   ++               QV+ K  V EV +  I L D   IPYGLAVWAAGNG  PL   L+ + PEQ+  +   RGRL+ D W+RVKG   VF++GDC  ++  PLPA AQ A QQG +L R  +++   S P+PE     T P      G   E     AK FQFL+LG LAY G + A+AQI      IK +G   +LLW+SVY++KQVS RNR LV FDW K+R++GRD+++F
Sbjct:   71 EDSFFSLILNRVVDTVDDAMVHFNRTFFPPKIDPQAK-----------KPTLVILGTGWAAHSLIKVIDTVKYDVRVVSPRNYFLFTPMLPSTAVGTVEFRSIVETFRTANPFVDYFEAHCVDVDLQKQVAVCESNI----PGEKRKFQIFYDYLVIAVGAATNTFGTPGVQEHCYFLKEISDARGLRRAIVERFELASFPDISKEEKCRLLSFVVVGGGPTGCEFAAELHDFLVQDLKKYYPKLFGDVQVLLLQSGDSILTQFDRTLQEKALENFRQS-------------NIQVITKARVTEVTSTHIRLVDGKEIPYGLAVWAAGNGTQPLTRLLLSKIPEQKVDE--ARGRLLVDSWLRVKGALNVFAVGDCAAMEPVPLPATAQVAGQQGAYLARLFNRDYCLSCPVPESEEKSTAPLAKWRPGGSPE----VAKPFQFLSLGILAYIGRERAMAQIETGLEKIKMAGVLTYLLWQSVYITKQVSFRNRVLVLFDWFKTRVFGRDMSQF 550          
BLAST of NO03G01870 vs. NCBI_GenBank
Match: XP_009038479.1 (hypothetical protein AURANDRAFT_10731, partial [Aureococcus anophagefferens] >EGB06729.1 hypothetical protein AURANDRAFT_10731, partial [Aureococcus anophagefferens])

HSP 1 Score: 418.7 bits (1075), Expect = 3.100e-113
Identity = 224/479 (46.76%), Postives = 305/479 (63.67%), Query Frame = 0
Query:  151 IVVLGTGWGAHAFLQSV-DALKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRNVNPYADYLEATCTGVNAAKKSITCQSVICEGNSCDIEEFELSYDMLLVAVGATTNTYGIPGVKEHCHFLKQINDAVKLRTSIGNAFERANLPGLTDAQRKQALTFVVVGAGPTGVEFTAELRDFVEDDVPKFYPHLLPFVRIKLVEASDRVLMMFDGALQAEAIKRLTEAPQKLVERGLISKDMTQVLLKVGVKEVRNREIVLSDNSTIPYGLAVWAAGNGPLPLVLNLIK---QSPEQEEKQGFGRGRLVTDEWMRVKGV--DGVFSIGDCC--VID-----DKPLPANAQAASQQGYFLGRQLSKNIDFSRPIPERVGPVTTPGEFLSVGE---KRENGKIYAKGFQFLNLGTLAYTGGDSALAQIAVDKA--AIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLT 612
            +VVLG+GWGA A + ++ ++    V VVSPRN+ LFTPMLAG++VGTVE+ SI EP+R++N   DYLEAT T ++  +K + C++V+CEG+ C I+EFE+ YD+++ A GATTNT+G+PGV+EHC FLKQI DA  LR  +GN FERANLP L+DA+R++AL+F VVGAGPTGVEF  EL DF+E +   FYP L+    + L+EA+  VL  FD +L+  A+  L ++      +G+       + L   V EV    ++L  +  +PYGL VWA GNGP  +V + +K       Q + Q + RGR   D W+RV G     VF+IGDC   V+D        LPA AQ A+QQG +L R L    D+    PE   P     +   + E      NG + A+ FQFLNLG LAY G   ALAQ+A+      +K++G A F LWRSVY+SKQVS RNR LV  DW+++R++GRD+T
Sbjct:    1 VVVLGSGWGAAALVSALGESYGGGVTVVSPRNYFLFTPMLAGASVGTVEYRSICEPLRSINGAVDYLEATATRIDVERKVVVCEAVVCEGSQCSIDEFEVPYDVVVCATGATTNTFGVPGVREHCLFLKQIADADALRQGLGNCFERANLPTLSDAERRRALSFAVVGAGPTGVEFCGELLDFLESEALAFYPKLVGEASVTLLEATTTVLGAFDASLRDVAVGELEKSRNGGGIKGV------DIRLGAAVTEVNGTHVLLGGDDPLPYGLCVWATGNGPTRVVTDTLKALGADGAQGDAQAWARGRFGVDAWLRVLGAPPGEVFAIGDCAADVVDFAAETKATLPATAQVAAQQGEYLARLLKLGPDYDLAKPEPSRPRGAADDDRRLDELFCDERNGHLVARPFQFLNLGILAYVGDGKALAQVALGDGDLGVKAAGRAAFGLWRSVYISKQVSPRNRLLVIGDWLRTRVFGRDIT 473          
BLAST of NO03G01870 vs. NCBI_GenBank
Match: XP_002296485.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87181.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 407.9 bits (1047), Expect = 5.500e-110
Identity = 213/484 (44.01%), Postives = 296/484 (61.16%), Query Frame = 0
Query:  146 GTRQRIVVLGTGWGAHAFLQSVDALKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRNVNPYADYLEATCTGVNAAKKSITCQSVICEGNSCDIEEFELSYDMLLVAVGATTNTYGIPGVKEHCHFLKQINDAVKLRTSIGNAFERANLPGLTDAQRKQALTFVVVGAGPTGVEFTAELRDFVEDDVPKFYPHLLPFVRIKLVEASDRVLMMFDGALQAEAIKRLTEAPQKLVERGLISKDMTQVLLKV-GVKEVRNREIVLSDNSTIPYGLAVWAAGNGPLPLVLNLIKQ--SPEQEEKQGFGRGRLVTDEWMRVKGVDG-VFSIGDCCVIDDKP-LPANAQAASQQGYFLGRQLSKNIDFSRPIPERVGPVTTPGEFLSVGEKRENGKIYAKGFQFLNLGTLAYTGGDSALAQIAV-------------DKAAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLT 612
            G ++ ++VLGTGWGA +FL+++D  KY+V V+SPRN+ +FTPMLAG++VGTV+F SITEPIR +N    YLEA    +N   +SI+C S++CEGNSC+ E F++SYD LL +VG  T T+G PGV+E+C++LKQ+ DA +++ +I N FE A LP LT+   ++ LTFV+VGAGPTG+EF AEL DF+E D P++Y   L +VRIK+VEA+  +L  F+  ++ EAI+RLT                    +K+ GV  ++  E        IPYG+++WAAG G LP+  +L+++    EQ   Q + RGRL  D W+RV G DG +F++GDC  I   P LPA AQ A+QQG FLG+ LS++                                Y   FQFL+LG LAYTG  SALAQ+ +                 ++  G  GF LWR++YL KQ S +N  LV  DWVK  L+GRD++
Sbjct:   17 GNKEHLIVLGTGWGAASFLKNIDTDKYDVTVISPRNYFVFTPMLAGASVGTVDFKSITEPIREINNKVRYLEAAANEINPLTQSISCTSIVCEGNSCETESFDISYDRLLFSVGGQTTTFGTPGVEEYCNYLKQVGDAQQIKNAIVNCFESAGLPNLTEEDMERELTFVIVGAGPTGIEFAAELLDFIESDGPRYYKDRLKYVRIKVVEAAPSILRPFEDGMKEEAIRRLTRT------------------IKIQGVGSIQPCE-------RIPYGMSLWAAGIGQLPITSSLVEELKGTEQTNAQQYARGRLAVDPWLRVLGGDGKIFALGDCSCISSTPMLPATAQVAAQQGEFLGKLLSRD--------------------------------YPPPFQFLDLGILAYTGSGSALAQVQIAPGKDLPGANENWSPVRLQIKGSLGFGLWRTIYLLKQTSFKNVVLVALDWVKVNLFGRDIS 443          
BLAST of NO03G01870 vs. NCBI_GenBank
Match: XP_005854664.1 (NADH dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU21698.1 NADH dehydrogenase [Nannochloropsis gaditana CCMP526] >EWM27940.1 alternative nadh-dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 407.1 bits (1045), Expect = 9.500e-110
Identity = 217/510 (42.55%), Postives = 309/510 (60.59%), Query Frame = 0
Query:  107 LSEKAVTVLDDTYLSLKESWTAPSPSDFRKSAKNLNFVKGTRQRIVVLGTGWGAHAFLQSVDALKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRNVNPYADYLEATCTGVNAAKKSITCQSVICEGNSCDIEEFELSYDMLLVAVGATTNTYGIPGVKEHCHFLKQINDAVKLRTSIGNAFERANLPGLTDAQRKQALTFVVVGAGPTGVEFTAELRDFVEDDVPKFYPHLLPFVRIKLVEASDRVLMMFDGALQAEAIKRLTEAPQKLVERGLISKDMTQVLLKVGVKEVRNREIVLSDNSTIPYGLAVWAAGNGPLPLVLNLIKQSPEQEEKQGFGRGRLVTDEWMRVKGVDG-VFSIGDCCVIDDKPLPANAQAASQQGYFLGRQLSKNIDFSRPIPE-RVGPVTTPGEFLSVGEKRENGKIYAKGFQFLNLGTLAYTGGDSALAQIAVDKAAI-KSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRF 614
            L ++ +  ++D  + L+ +        FR+    L    GT++R+++LGTGWG HA  + VD   YEVV+VSPRNF LFTPMLAGS+VGTV++ SI EPIR  NP ADY EA    +    +++  +S I      + EEF   YD+L+   GA + T+G PGV+EH  FLK+I+DAVKLR ++ + FERAN+P ++  ++K+ L+FVVVG GPTGVEF+ E  DF+  D+ K+YP L+  V  K+++A  R+L +FD ALQ + ++             ++     +V+L   V +V  + I L     +PYGL VWAAG  P  +  +LI   PEQ       RGRL  D W+RV+G +G + ++GD   ++  PLPA  Q A+Q G FLGR L++  D S P P   +  V   G+  +V   R  G++ A+ F FLNLG LAY G  +ALAQ+        + +  AG LLWRSVYL KQVS RNR LV  DW+++R++GRD++RF
Sbjct:   87 LFDRTLDTVEDIGVHLRRATERDMDRRFRRD--RLTTKAGTKKRVMILGTGWGGHAVTKVVDTGLYEVVIVSPRNFFLFTPMLAGSSVGTVDYRSIIEPIRAANPLADYYEAQALAIYPNNQTVRIRSEI-PNEVGEYEEFLAPYDILVYGCGAQSGTFGTPGVREHAFFLKEISDAVKLRQALVDRFERANMPSVSMEEKKRILSFVVVGGGPTGVEFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSRILPVFDAALQEQGLE-------------VLKAQGIEVMLNRKVLKVEEKHIELDGGEILPYGLCVWAAGTAPRDITKSLIAAIPEQSASTAGQRGRLSVDRWLRVQGTNGSILALGDAVEVEGLPLPATGQVAAQHGAFLGRLLNREYDLSTPNPTFDLEKVNAFGKVANV--LRLRGRLEAQAFSFLNLGLLAYVGQANALAQVQTGNLKFGEYTARAGNLLWRSVYLVKQVSTRNRVLVLNDWLRTRVFGRDISRF 578          
BLAST of NO03G01870 vs. NCBI_GenBank
Match: OSX78783.1 (hypothetical protein BU14_0098s0009 [Porphyra umbilicalis])

HSP 1 Score: 401.0 bits (1029), Expect = 6.800e-108
Identity = 206/466 (44.21%), Postives = 290/466 (62.23%), Query Frame = 0
Query:  148 RQRIVVLGTGWGAHAFLQSVDALKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRNVNPYADYLEATCTGVNAAKKSITCQSVICEGNSCDIEEFELSYDMLLVAVGATTNTYGIPGVKEHCHFLKQINDAVKLRTSIGNAFERANLPGLTDAQRKQALTFVVVGAGPTGVEFTAELRDFVEDDVPKFYPHLLPFVRIKLVEASDRVLMMFDGALQAEAIKRLTEAPQKLVERGLISKDMTQVLLKVGVKEVRNREIVLSDNSTIPYGLAVWAAGNGPLPLVLNLIKQSPEQEEKQGFGRGRLVTDEWMRVKGVDGVFSIGDCCVIDDKPLPANAQAASQQGYFLGRQLSKNIDFSRPIPERVGPVTTPGEFLSVGEKRENGKIYAKGFQFLNLGTLAYTGGDSALAQIAVDKAAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRF 614
            + RI+VLG+GWGAHA ++ +D   Y+V V+SPRN   FTPMLA ++VGTVEF S+ EP+R  N   DY++A+ T V+  +++++C S +          FEL Y  L+VAVGATTNT+G+PGV+EH  FLK + DA K+R +I N FERANLP  ++ ++ + L  VV+G GPTGVE+ AEL DF+  D+ + YP L+P VR+ L+++ D +L  FD  LQ  A++                    +V+L   V ++    I L D + + YG+A+WAAGNG  PLV +LI   P+    Q   RGRL  D+W+RVKG   VF++GD    DD P+PA AQ A+QQ  +  R L+++   S  IPE   P     + ++  ++ +     AK FQFL+LG LAY G D ALAQ+ + K  I  SG A  LL+ SVY +KQVS RNR LV  DW K++++GRDL++F
Sbjct:  166 KPRIIVLGSGWGAHALIKVLDCDLYDVTVISPRNAFAFTPMLAAASVGTVEFRSLLEPVRVANELVDYVQASATSVDLERQTVSCVSDLGRVEGEVPVTFELPYSYLIVAVGATTNTFGVPGVREHAFFLKSVVDARKIRAAIVNRFERANLPTTSEEEKDRLLHTVVIGGGPTGVEYCAELNDFLTSDLRRKYPRLVPRVRVTLLQSGDAILTAFDDTLQGAAMEN-------------FESSNVEVVLNARVVDIGPTMITLKDGTEVDYGMAIWAAGNGTTPLVKSLITTIPD----QAGARGRLRIDDWLRVKGTTNVFALGDAACNDDDPMPATAQVAAQQAAYAARLLNRDYCLSCEIPEASSPRKGLSKLINGSDEDDEKTRVAKPFQFLSLGLLAYIGRDRALAQVELGKKKIFLSGAATRLLYDSVYATKQVSFRNRVLVLVDWAKTKVFGRDLSQF 614          
BLAST of NO03G01870 vs. NCBI_GenBank
Match: CEM17374.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 396.4 bits (1017), Expect = 1.700e-106
Identity = 214/472 (45.34%), Postives = 295/472 (62.50%), Query Frame = 0
Query:  148 RQRIVVLGTGWGAHAFLQSVDALKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRNVNPYADYLEATCTGVNAAKKSITCQSVICEGNSCDIEEFELSYDMLLVAVGATTNTYGIPGVKEHCHFLKQINDAVKLRTSIGNAFERANLPGLTDAQRKQALTFVVVGAGPTGVEFTAELRDFVEDDVPKFYPHLLPFVRIKLVEASDRVLMMFDGALQAEAIKRLTEAPQKLVERGLISKDMTQVLLKVGVKEVRNREIVLSDNSTIPYGLAVWAAGNGPLPLVLNLIKQSPEQEEKQGFGRGRLVTDEWMRVKGVDG-VFSIGDCCVIDDKPLPANAQAASQQGYFLGRQLSKNIDFSRPIPERVGPVTTPGEFLSVGEK-----RENGKIYAKGFQFLNLGTLAYTGGDSALAQI-AVDKAAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTR 613
            + R+V+LG+GW AHA ++ +D  K++VV+VSPRN+ LFTPMLA SAVGTVE+ SITEP+R  NP   Y E     ++  KK I  +S I +    +  EF + YD L+ + G  ++++GI GV EHC+FLK+I DA KLRT++ + FERAN+P  +D ++++ LTF V G GPTGVEF  EL D +  +  KFYP L P  ++ LV++   +L +FD +L++  +       QKL ++G+      QV L+  V+EV  + I+LS+ + +PYGLAVWAAG GP  +   LI++ P Q+E     + +L  D W+RV   +G + ++GDC  + D PLP  AQ A+QQG FL R L++  + S+             E    GE+     R  GK  A  F F N G LAY G   ALAQI A D   IK+SG+AGF LWRSVY+ KQVS RNR LV FDW KSR++GRDLTR
Sbjct:  200 KPRLVILGSGWAAHAMIKIIDTDKFDVVIVSPRNYFLFTPMLAASAVGTVEYRSITEPMRKANPLTSYYEGEAIDIDPEKKEIRVRSKI-QTTEGETVEFAVPYDTLIFSPGVKSSSFGIKGVYEHCYFLKEIEDARKLRTAVQDRFERANIPDTSDEEKQRLLTFAVCGGGPTGVEFCGELFDLLRSEFRKFYPKLTPMAKVVLVQSGPNILPIFDESLRSVGL-------QKLRDQGV------QVALETRVQEVGPKSILLSNGTELPYGLAVWAAGTGPREITKRLIEKVPTQQEMASQSK-KLAVDPWLRVYDTNGTILAMGDCTKM-DPPLPQTAQVAAQQGAFLARLLNRGYNMSKADGRPPTYSYKESEKKGFGERLFSILRIRGKKKADPFNFFNYGMLAYLGDQKALAQIQANDLDFIKASGQAGFYLWRSVYVVKQVSFRNRVLVLFDWFKSRIFGRDLTR 655          
BLAST of NO03G01870 vs. NCBI_GenBank
Match: XP_005821538.1 (hypothetical protein GUITHDRAFT_98053 [Guillardia theta CCMP2712] >EKX34558.1 hypothetical protein GUITHDRAFT_98053 [Guillardia theta CCMP2712])

HSP 1 Score: 395.2 bits (1014), Expect = 3.700e-106
Identity = 221/510 (43.33%), Postives = 318/510 (62.35%), Query Frame = 0
Query:  137 SAKNLNFVKGTRQ-RIVVLGTGWGAHAFLQSVDALKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRNVNPYADYLEATCTGVNAAKKSITCQSVICEGNSCDIEEFELSYDMLLVAVGATTNTYGIPGVKEHCHFLKQINDAVKLRTSIGNAFERANLPGLTDAQRKQALTFVVVGAGPTGVEFTAELRDFVEDDVPKFYPHLLPFVRIKLVEASDRVLMMFDGALQAEAIKRLTEAPQKLVERGLISKDMTQVLLKVGVKEVRNREI--------VLSDNSTIPYGLAVWAAGNGPLPLVLNLIKQS-PEQEEKQGFGRGRLVTDEWMRVKGVD--GVFSIGDCCVIDDKPLPANAQAASQQGYFLGRQLSKNIDFSRPIPERVGPVTTPGEFLSVGEKR-------------ENGKIYAKGFQFLNLGTLAYTGGDSALAQIAVDKAA-----------IKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDL 611
            S  ++N  +G R+ R+V+ G+GWGAHA L+ +D    +VV VSPR++ +FTPMLA ++VGTVE+ SITEP+R+ NP   Y EA+ T ++A +K+I C+ V  EG      EF+LSYD L++ +G   NT+G PGVKEHC FLK INDA +LR++I + FE A+LP LTD +R++ L+FVVVG GPTGVEF+ E  DF+ +D+ ++YP L+PFVR +L++A D +L  FD  +QA A+            R L+S+ + +VLL   V+EV  +EI          +   T  Y L VWAAGN P+ L     K++ P +++K    RGR+VTD+W+RV G++   VF++GDC   +   LP  AQ A+QQG +L R  ++     R   +   P  T G  L++  +              +  +++ + FQFL+LG LAY GG SA+AQ+ V   +            K SG AG++LWRSVYL+KQV+ RNR LV FDW+KSR++GRD+
Sbjct:   58 SMAHMNSGQGERKPRVVIAGSGWGAHAMLKIIDTSVLDVVCVSPRSYFIFTPMLASASVGTVEYRSITEPMRSANPCVTYHEASITSIDADRKTIRCKPVF-EGFD---REFDLSYDYLVLGLGMKINTFGTPGVKEHCFFLKDINDAKRLRSAIIDKFESASLPNLTDEERRELLSFVVVGGGPTGVEFSGEFFDFLNEDLKRYYPQLVPFVRTELIQAGDALLNQFDETMQAMAL------------RSLLSQGV-KVLLNARVEEVSAKEIRYNIRNPDKTTTTITTKYSLCVWAAGNSPIELSKEFQKKNQPWKQDK----RGRIVTDDWLRVVGINDGSVFALGDCSESESVVLPQTAQVAAQQGAYLARIFNRQF---RGPDKGFLPEQTYGAALALSLRARARDGDELAKTIIDEHRVFVRPFQFLSLGLLAYVGGRSAIAQVEVGMDSPHKTGTQLLRLSKQSGLAGWILWRSVYLTKQVAFRNRVLVLFDWMKSRVFGRDI 543          
BLAST of NO03G01870 vs. NCBI_GenBank
Match: CEM16721.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 373.2 bits (957), Expect = 1.500e-99
Identity = 201/491 (40.94%), Postives = 299/491 (60.90%), Query Frame = 0
Query:  136 KSAKNLNFVKGTRQ-RIVVLGTGWGAHAFLQSVDALKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRNVNPYADYLEATCTGVNAAKKSITCQSVICEGNSCDIEEFELSYDMLLVAVGATTNTYGIPGVKEHCHFLKQINDAVKLRTSIGNAFERANLPGLTDAQRKQALTFVVVGAGPTGVEFTAELRDFVEDDVPKFYPHLLPFVRIKLVEASDRVLMMFDGALQAEAIKRLTEAPQKLVERGLISKDMTQVLLKVGVKEVRNREIVLSDNSTIPYGLAVWAAGNGPLPLVLNLIKQSPEQEEKQGFGRGRLVTDEWMRVKGVDG-VFSIGDCCVIDDKPLPANAQAASQQGYFLGRQLSKNIDFSRPIPERVGPVTTP-----------GEFLSVGEKRENGKIYAKGFQFLNLGTLAYTGGDSALAQI-AVDKAAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTR 613
            +S   L  VKG R+ RIVV+G+GW +HAF++S+D  K++VV++SPRN+ LFTP+LA ++VGTVE+ SITEP+R  NPYA Y E   T +    ++I  ++ +   +   I +  + YDML+ + G  ++++G+ GV E+C+FLK+++DA +LR+++ + FERAN+P +T+ ++++ LTFVV   GPTGVEF  EL D +  +    YP L    R+ ++++   +L +F+ +L++  +  +T A               +V L+  V  V    + L++ + +PYGLAVW AG GP  +   LI++ P Q E     + +L  D W+RV G +G + ++GDC  + +  LP  AQ ASQQG++L R L++  D S   P+   PV T            G   +    R  GK  A  F+F N G LAY G D  LA I A D   IK+SG+AGF LWRSVY  KQVSLRNR LV FDW+KSR++GRDL+R
Sbjct:   65 RSEDELGDVKGPRKHRIVVIGSGWSSHAFIKSIDTDKFDVVIISPRNYFLFTPLLAAASVGTVEYRSITEPMRKANPYASYFEGEATDIFPENRTIRMRTRMQTNDGSKI-DLNVPYDMLVFSPGVKSSSFGVKGVYENCYFLKEVDDARRLRSAVQDRFERANIPEVTEEEKRRILTFVVCEGGPTGVEFCGELYDLLSTEFKTLYPKLKSLARVVMIQSGPTILPVFEESLRSVGLNVITNAG-------------VEVALETRVNAVGPYSMTLNNGTELPYGLAVWTAGTGPRNITERLIEKVPVQAEMTSRSK-KLTIDPWLRVYGTNGSILAMGDCTKM-EPILPQTAQVASQQGHYLARMLNRGYDMS--TPDNQPPVQTDDNNGXXXXXXGGVRKTFNLLRTLGKREADPFRFFNYGMLAYLGNDKGLAHIQANDLDLIKASGQAGFYLWRSVYFVKQVSLRNRVLVLFDWMKSRMFGRDLSR 537          
BLAST of NO03G01870 vs. NCBI_GenBank
Match: XP_005535723.1 (NADH dehydrogenase type II [Cyanidioschyzon merolae strain 10D] >BAM79437.1 NADH dehydrogenase type II [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 372.9 bits (956), Expect = 2.000e-99
Identity = 229/649 (35.29%), Postives = 332/649 (51.16%), Query Frame = 0
Query:   16 YSLLPFFSSLHAF-------LLPHAPASATGRLTRRHMAPSQQRAEEVLR----SKLQEENTGPQSAPEV-PVPPHLPKDDDMSDYDLKIVRELTQERPYFQFLSEKAVTVLDDTYLSLKESWTAPSPSDFRKSAKNLNFVKGTRQRIVVLGTGWGAHAFLQSVDALKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRNVNPYADYLEATCTGVNAAKKSITCQS------VICEGNSCD-------------------------------IEEFELSYDMLLVAVGATTNTYGIPGVKEHCHFLKQINDAVKLRTSIGNAFERANLPGLTDAQRKQALTFVVVGAGPTGVEFTAELRDFVEDDVPKFYPHLLPFVRIKLVEASDRVLMMFDGALQAEAIKRLTEAPQKLVERGLISKDMTQVLLKVGVKEVR--NREIVLSDNSTIPYGLAVWAAGNGPLPLVLNLIKQSPEQEEKQGFGRGRLVTDEWMRVKGVDGVFSIGDCCVIDDKPLPANAQAASQQGYFLGRQLSKNIDFSRPIPERVGPVTTPGEFLSVGEKRENGKIYAKGFQFLNLGTLAYTGGDSALAQIAVDKAAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRF 614
            Y +  F SS+HA        L+   P +   R  R      +      LR     +L + +  P   P+  P+ P   K+               + R Y   + ++ +   +D  L L+          F    + L+     + R+V+LGTGW  HA ++ +D  KYEV+V+SPRN+ LF PML  SA+G VEF S  EPI   NP+  Y EA   GV+  ++ + C++       +  G+  D                               I EFE+ Y   +V VG+  NT+  PG KE+C FLK+I DA K+R+ +   FE ANLP  +D +R + L FVVVG GPTGVEF  EL DF+ +D  K+Y  LL +V++ L+++   +L  FD +LQ  A++ L +A               ++ ++ G + VR    EI L D + IPYG+ VWAAG GP  LV +LI+  P Q     F + +LV D+W+RV G +GVF+ GDC     +PLPA AQ A QQG +L R L++       IPER        E+      R     +AK FQFL+ G LAY G + A+AQI +   ++K SG   +L+WRSVY  KQVS+RNR L+ FDW+K+ ++GRD+++F
Sbjct:   16 YLITGFVSSVHALGRQRQVPLVSRKPNTPNFRPQRSARVVQRTHKLRGLRLCEGERLVKTDEKPAVQPDTQPLKPGDGKESPXXXXXXXXXETRGRRRTYLGLVWDRTLDTFEDALLHLRR--------QFFWQGEFLSSSGRPKPRLVILGTGWVGHAMVKIIDIDKYEVIVISPRNYFLFQPMLPSSALGIVEFRSCCEPILRANPFIIYYEAEAVGVDIQRRVVKCRAKVRRRGALSVGSESDVGAPSLAETSQDVHALQPRFSTKSNTDEIIGIREFEVPYTYCVVGVGSAVNTFNTPGAKENCFFLKEIPDARKIRSEVVRIFEEANLPETSDEERSRLLHFVVVGGGPTGVEFAGELHDFLVEDAVKYYKKLLKYVQVTLLQSGQSILTQFDKSLQDRALQNLRDA---------------EINVRTGSRVVRITETEIYLQDGAVIPYGMCVWAAGVGPQKLVTDLIESIPAQTT---FKKRQLVVDDWLRVIGAEGVFAAGDCATNLHEPLPATAQVAGQQGAYLARLLNREYCLDCDIPERT-------EYTRTWIDRAR---FAKPFQFLSFGLLAYIGRERAMAQIEMGDTSVKLSGTLTYLIWRSVYAVKQVSMRNRILITFDWIKAAIFGRDISQF 628          
BLAST of NO03G01870 vs. NCBI_GenBank
Match: CEL93662.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 372.1 bits (954), Expect = 3.400e-99
Identity = 201/488 (41.19%), Postives = 296/488 (60.66%), Query Frame = 0
Query:  136 KSAKNLNFVKGTRQ-RIVVLGTGWGAHAFLQSVDALKYEVVVVSPRNFMLFTPMLAGSAVGTVEFLSITEPIRNVNPYADYLEATCTGVNAAKKSITCQSVICEGNSCDIEEFELSYDMLLVAVGATTNTYGIPGVKEHCHFLKQINDAVKLRTSIGNAFERANLPGLTDAQRKQALTFVVVGAGPTGVEFTAELRDFVEDDVPKFYPHLLPFVRIKLVEASDRVLMMFDGALQAEAIKRLTEAPQKLVERGLISKDMTQVLLKVGVKEVRNREIVLSDNSTIPYGLAVWAAGNGPLPLVLNLIKQSPEQEEKQGFGRGRLVTDEWMRVKGVDG-VFSIGDCCVIDDKPLPANAQAASQQGYFLGRQLSKNIDFSRPIPE-RVGPVTTPGEFLSVGEKREN-------GKIYAKGFQFLNLGTLAYTGGDSALAQI-AVDKAAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDWVKSRLWGRDLTR 613
            +S   L   +G R+ RIVV+G+GW +HAF++S+D  K++VV++SPRN+ LFTP+LA ++VGTVE+ SITEP+R  NPYA Y E   T +    +++  ++ +   +   I +  + YD L+ + G  ++++G+ GV E+C+FLK+++DA +LR+++ + FERAN+P +T+  +++ LTFVV G GPTGVEF  EL D +  +    YP L    R+ ++++   +L +F+ +L+A  +  +T A               +V L+  VK V    + L + + +PYGLAVW AG GP  +   LI++   Q E     R +L  D W+RV G +G + ++GDC  + D  LP  AQ ASQQG +L R L++  D S P  +  V P    G+    G  R+        GK  A  F+F N G LAY G D  LA I A D   IK+SG+AGF LWRSVY  KQVSLRNR LV FDW+KSR++GRDL+R
Sbjct:  123 RSEDELGDEQGPRKHRIVVIGSGWSSHAFIKSIDTHKFDVVIISPRNYFLFTPLLAAASVGTVEYRSITEPMRKANPYASYFEGEATDIFPENRTVRMRTRMQTNDGSKI-DLNVPYDTLVFSPGVMSSSFGVKGVYENCYFLKEVDDARRLRSAVQDRFERANIPEVTEEAKRRILTFVVCGGGPTGVEFCGELYDLLSTEFKTLYPKLKSLARVVMIQSGPTILPVFEESLRAVGLNVITTAG-------------VEVALETRVKAVGPYSMTLHNGTELPYGLAVWTAGTGPRKITERLIEKVAVQAEMTSRAR-KLTIDPWLRVYGTNGSILAMGDCTKM-DPILPQTAQVASQQGDYLARMLNRGYDLSTPDDQPPVQPDDKNGDXXXXGAVRKAFNLLRTLGKKEADPFRFFNYGMLAYLGNDKGLAHIQANDLDLIKASGQAGFFLWRSVYFVKQVSLRNRVLVLFDWMKSRMFGRDLSR 594          
The following BLAST results are available for this feature:
BLAST of NO03G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005704866.13.700e-11443.19NADH dehydrogenase isoform 2 [Galdieria sulphurari... [more]
XP_009038479.13.100e-11346.76hypothetical protein AURANDRAFT_10731, partial [Au... [more]
XP_002296485.15.500e-11044.01predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_005854664.19.500e-11042.55NADH dehydrogenase [Nannochloropsis gaditana CCMP5... [more]
OSX78783.16.800e-10844.21hypothetical protein BU14_0098s0009 [Porphyra umbi... [more]
CEM17374.11.700e-10645.34unnamed protein product [Vitrella brassicaformis C... [more]
XP_005821538.13.700e-10643.33hypothetical protein GUITHDRAFT_98053 [Guillardia ... [more]
CEM16721.11.500e-9940.94unnamed protein product [Vitrella brassicaformis C... [more]
XP_005535723.12.000e-9935.29NADH dehydrogenase type II [Cyanidioschyzon merola... [more]
CEL93662.13.400e-9941.19unnamed protein product [Vitrella brassicaformis C... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL070nonsL070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005714NSK005714Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G01870.1NO03G01870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|571898gene_1372Nannochloropsis oceanica (N. oceanica CCMP1779)gene
NDAgene1000Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G01870.1NO03G01870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G01870 ID=NO03G01870|Name=NO03G01870|organism=Nannochloropsis oceanica|type=gene|length=2869bp
AAAAATTGTTATTACTGATTGTCTCTGTATTCAGAGAAAGGCATTATTTA
CAGTTAGTCCTATGCATAGGAAGCATTCCAGTCAAGACCCACCAGTTCCT
TCAGAGACGGCCAGCAGAGCCCGCCATAGCCGAGTCCGCGTCGCCATAGT
CTCTGTGAAGGCTTAGCTTTGTGACTTATGTCCCGTAAAAGGTGACGGAT
TTCTTGCACTGAAAACTTTGTGCGTGACTCTGTGAGAATGTATCACGGCC
ATAGATGGTCACAAGGCACTGGTTTACTGCGGTTACCGCGTCCCCTCAGT
GATGTGCAATGAGGCCCGCTCCGAGGAGGGAACTCTACCATGTTTACCCA
TCATGGGTTTCGACCGTACGGACACCATGGCACGAACCATTTTGAGACCA
CATTTCTTCCGAATTTCATCATCGAATTCAGTCCCAGCTCGCACCTTGCC
ATATCTCGCGCACCATGGCAGGGGGCCTGACCTCGTCTTGTCGGGCAACG
GCCCATTGGTAACTGATCCGGCGCTAAAAAGTCGTCCCCGTCGGCGACGA
CGCTGACTCCAGCAAAACGAAGATCAGAGCTAGCCCCAAGTTCCCCTCAC
CTAAGCTTATGCCCAGACTATCCACTTTCAACTGACTGACTAACACTCTC
AAACCTGTTCTCTATCAGAGGGCCGCCGCAGGGACGCGTTTCCAGCTACC
CAAAAGCGGTCTACGTGGTCGGTCTTCAGCCGAGCCTGCGCTCCCCTCTC
TCTCCTGACCTATGTCGAGACGAGCAAGCCTCTCACGACTATTCCTCTTC
GCCTGCTACAGCCTCCTCCCTTTCTTCTCCAGTCTGCATGCATTTCTTCT
GCCTCACGCACCAGCATCCGCCACGGGCCGGCTAACAAGAAGGCACATGG
CACCTTCCCAGCAGCGGGCAGAGGAGGTCTTGCGTTCCAAGCTCCAAGAG
GAAAACACAGGCCCGCAGTCCGCCCCAGAAGTCCCTGTCCCTCCGCATCT
TCCCAAGGACGATGACATGAGCGACTATGATCTCAAAATTGTCCGGGAGC
TGACTCAGGAGCGGCCCTACTTTCAGTTTCTCTCCGAAAAAGCCGTGACG
GTGCTTGACGACACTTATCTAAGCTTGAAAGAGTCCTGGACCGCCCCATC
GCCTTCCGACTTTCGCAAAAGTGCCAAAAACTTAAATTTTGTCAAGGGTA
CTCGGCAAAGAATTGTTGTTCTGGGGACAGGATGGGGCGCTCATGCGTTC
TTGCAGTCAGTCGATGCCCTGAAATACGAGGTGGTTGTGGTAAGCCCCCG
GAATTTCATGCTATTTACTCCCATGCTTGCGGGCTCAGCGGTGGGTACAG
TAGAGTTTTTGAGCATTACGGAGCCGATTCGAAATGTGAATCCGTATGCG
GATTATTTGGAAGCGACTTGCACGGGTGTGAACGCGGCCAAGAAGAGCAT
TACGTGTCAGTCGGTTATCTGTGAAGGAAACAGCTGCGACATCGAGGAGT
TCGAATTGTCTTATGACATGCTGTTGGTGGCGGTCGGGGCGACTACCAAC
ACGTATGGTATTCCGGGGGTGAAGGAGCACTGCCACTTTCTCAAGCAGAT
CAATGACGCCGTCAAGCTGCGGACGTCGATCGGCAATGCCTTTGAACGCG
CCAACCTGCCTGGGCTAACTGATGCACAGCGCAAGCAAGCCCTGACATTC
GTCGTAGTCGGCGCGGGGCCGACCGGTGTGGAGTTTACGGCGGAGCTGAG
GGACTTTGTGGAGGATGATGTGCCGAAGTTTTATCCACATTTGCTGCCCT
TCGTGAGGATAAAGTTGGTGGAAGCGAGCGATCGCGTTCTCATGATGTTC
GACGGGGCGCTCCAAGCAGAGGCCATCAAGAGACTTACCGAGGCCCCTCA
AAAACTGGTCGAGCGAGGACTAATCTCCAAGGACATGACCCAGGTGTTAT
TGAAAGTAGGGGTGAAAGAGGTGAGGAACCGCGAGATCGTCTTGTCGGAC
AACAGTACCATTCCCTACGGCCTGGCTGTGTGGGCGGCAGGCAACGGTCC
CTTGCCTCTGGTGCTGAATCTCATTAAGCAATCTCCAGAGCAAGAGGAGA
AGCAGGGTTTTGGGCGGGGAAGGCTTGTGACGGACGAGTGGATGCGGGTT
AAGGGCGTGGATGGTGTTTTTTCGATCGGCGACTGCTGTGTGATCGATGA
TAAGCCTCTGCCGGCGAACGCCCAGGCGGCCTCGCAACAAGGTTATTTCC
TCGGGCGGCAACTTAGCAAGAATATTGATTTTTCACGACCCATCCCGGAA
AGGGTTGGCCCCGTGACGACTCCTGGGGAGTTTCTCTCCGTGGGAGAGAA
GAGGGAGAATGGTAAGATTTACGCAAAAGGATTTCAATTTTTGAATTTGG
GGACGTTGGCGTACACGGGAGGGGATAGTGCCTTGGCTCAGATTGCGGTA
GATAAGGCGGCGATCAAGTCGAGTGGAGAAGCAGGCTTTTTGTTGTGGCG
GTCAGTGTACTTGTCGAAGCAGGTGAGTTTGCGGAATCGCGCGTTGGTGT
TTTTTGATTGGGTCAAGAGCAGGTTGTGGGGGCGGGACCTTACTAGATTT
AACGAGACGTAGAAAGCTAGAAGAGGTGTTCATCTCACTTGATTTCCCTC
CTTTCCTGTGTGTGCTTGCGTGCGTGCGTGTGCGTGTCCACGAATGTATG
TGTGCGTGTCAGTGTGTTTTGTGTCTGTGTGTTTTTGGTATTGATATTGA
GCGTATGTGTGGCGTTGGTGTAATTAATTAGTGGCAAGTGGAGGGAGAAC
AGAAAGAAAAAATAGCGGCGACGACAAGTAAGCGGTTAGAGAAGCAGAGA
AGTGAAAAAAAAGAAACAG
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protein sequence of NO03G01870.1

>NO03G01870.1-protein ID=NO03G01870.1-protein|Name=NO03G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=617bp
MSRRASLSRLFLFACYSLLPFFSSLHAFLLPHAPASATGRLTRRHMAPSQ
QRAEEVLRSKLQEENTGPQSAPEVPVPPHLPKDDDMSDYDLKIVRELTQE
RPYFQFLSEKAVTVLDDTYLSLKESWTAPSPSDFRKSAKNLNFVKGTRQR
IVVLGTGWGAHAFLQSVDALKYEVVVVSPRNFMLFTPMLAGSAVGTVEFL
SITEPIRNVNPYADYLEATCTGVNAAKKSITCQSVICEGNSCDIEEFELS
YDMLLVAVGATTNTYGIPGVKEHCHFLKQINDAVKLRTSIGNAFERANLP
GLTDAQRKQALTFVVVGAGPTGVEFTAELRDFVEDDVPKFYPHLLPFVRI
KLVEASDRVLMMFDGALQAEAIKRLTEAPQKLVERGLISKDMTQVLLKVG
VKEVRNREIVLSDNSTIPYGLAVWAAGNGPLPLVLNLIKQSPEQEEKQGF
GRGRLVTDEWMRVKGVDGVFSIGDCCVIDDKPLPANAQAASQQGYFLGRQ
LSKNIDFSRPIPERVGPVTTPGEFLSVGEKRENGKIYAKGFQFLNLGTLA
YTGGDSALAQIAVDKAAIKSSGEAGFLLWRSVYLSKQVSLRNRALVFFDW
VKSRLWGRDLTRFNET*
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Synonyms
Publications