NDA, gene1000 (gene) Nannochloropsis gaditana

Overview
NameNDA
Unique Namegene1000
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1021225..1023470 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100050g20
Gene biotypeprotein_coding
GeneNDA
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1021225..1023470 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL053ngnoL053Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01870NO03G01870Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1038rna1038-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1038rna1038Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1038

>rna1038-protein ID=rna1038-protein|Name=rna1038|organism=Nannochloropsis gaditana|type=polypeptide|length=636bp
MVEEVLLKRLGKSRHSASSSQSRTSLTMSIRVAPKVFFLACCCLLPFLTC
LHAFLVAPSSSSALALLKRSAVPPPQQTEEAVRSKLREKNTGPQSEPPSP
STGNSMMEEDSKIIQELTKERPYIQFLSEKAVTVLDDTFLSLKESITAPD
PSEFRRRVKEGKESKDTRQRIVVLGTGWGAHAFLQSVDAVKYEVVVVSPR
NFMLFTPMLAGSAVGTVEFLSITEPIRRVNPYADYLEATCTHVNAAQKSI
TCQSVICEGNSCDIEEFELPYDMLLVAVGATTNTYGIPGVKEYCHFLKQI
NDAVKLRTSIGNAFERANLPGLSDAQRTQALTFVIVGAGPTGVEFTAELR
DFVEEDVPKFYPHLLPFVRIKLVEASDRVLTMFDEALQAEAVKRLTEAPQ
KLVEQGLIGEDMTEVLLKVGVKEVKNRDIVLSDGRSLPYGLAVWAAGNGP
LPLVSNLIKQLPEQEEKQAFGRGRLVTDEWLRVKGAEGVLAIGDCCVIND
KPLPANAQAASQQGFFLGRLLSKNIDFTRSIPERTGPITTPGELLSVGEK
RENGKIYAKGFQFLNLGTLAYTGGDSALAQIAVDKRAIKSSGEAGFLLWR
SVYLSKQVSLRNRALVFFDWVKSRLWGRDLTRFNET
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Synonyms
Publications