NO03G01780, NO03G01780 (gene) Nannochloropsis oceanica

Overview
NameNO03G01780
Unique NameNO03G01780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2604
Alignment locationchr3:556625..559228 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:556625..559228 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO03G01780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL070nonsL070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G01780.1NO03G01780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G01780.1NO03G01780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G01780 ID=NO03G01780|Name=NO03G01780|organism=Nannochloropsis oceanica|type=gene|length=2604bp
TCCGCCATAGTATTGGAGTGCCTGCGCGATGATGATTTGGGAATCTTGAA
TCAGACGACGTGATGAGGAAGGTGAAGGGCGAAATACAGGGCGGAGAGGG
GACGCAAGAACGCCTGCAGTGCGCAATGCGTAGACTTCATAAGGTTTAGC
TCGCAACTTAGACCAATACCGCGATGCTGTTCCTTTCCTTCAAGGCACGC
GAGCAGAAGAAGCAGCTTTCACTCCTTCACTCACTCTCACTCTTCGCGAA
ATGCAGTACGAGCGACACCCGCCCATTATTCGAATGCTGCATCTGCAGTG
CCTGCGCGAAGTCTTGTCTCTTATCCCTTCCGAACTCAACCAAAACAATC
CTTAATACACCACATGCAATGAAATAAGTAAAATGGAGCTACGGTCTCCC
AATTGGGCCGGCGAAAACCTCCCTCCTGCGGCTAATGGGCATCATTCTCG
AGgtaagttaacgtgtgccctcgaggggagtcgtgtccatgtgcccaagt
gcacatttcttctgtgtatgtctatgagaacctgccatcccctccaaagt
cccgcagtcttttcgctgggtgctgtgctttatcatttcctcagccacct
cttcgaccgatcacgacctgcgcgtctcatactctcccactacacgctca
atacccacacacacaccacagCTCCATCCTCCATCACCACTCCAGCCGCC
CGAGCCCCAATTGTCACGCGGGTTCGACCAAGCTCGCCGGGCTTGCGAAT
GCTGACCTCCCCGCGCCCTATGGCGGTTGGTGCTGCCCCTGGTGCTGCAG
CCGGACCCCCCTCTTCCTACTCCTTCCACTTCCCCTCCGTGCTCTCCACG
TCCTTTGCGTACCCCAAGATCGATATCCATCGTCGGATGGACATGTCTGT
GTCTAGGCGAGCCATGGACAGCAACGGCAACAGTGAATCTTTCGGTATGA
TGGATGCCACCGCGGCCAGGAACGGGGTGAGGAGACATCATCACACAAGG
GAACTTGCTCCTGCTGGTGCAACTGCTGCGTCGGCTACAGCTGTTCCTCC
TCCTCCTCATTCTCCTCTTCCTGTAGACGCAGCAGGAAATTTTAGCATCA
GCATCGCAGCAGCATCTTTTTCTCCTCTTGAAGACGGCGTTATGTTTGCT
TTTGACTCCCCCTCTTCGAGTGCCATGCAAGGTTCGCCTACCAAGCATGC
AGTGGTTGTAGCAGCAGCAGCAGCAGCAGCAGCACCAATTACAGCGATAG
GGACAGCAACCTGCTCATCTTCCTCTTGTGGCGACCGCGCAGTCCCTTCC
TTCAACAAGTTATGCCCCAACTTGTCCCCTCCTCCGCTACCAGCAGCAGC
AATATCAACAGCAGCGCCAAGAGCAGCAGTCGAAGCAGTACTACCGATGA
TTATGACAGCTCCGCCACCATCGCCCGCCCACTCTCCACTCCATTCTCCC
ATCGCAAGACGACCACGGCACGAGAAGGTCTTCCTTCAAGCATTCACCGT
GGGCCAGCACATCAGTATCTCACAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGGACCACCATCCTCCCAACTGGAGCAGTAGTAGAAGCGAC
TGCAACCATGAATTCCAGAATGAGGCGCACACGGCTGCTACAGCTGCTGC
TTTCCTGGACAGCACCAGCAGCAATAACAACAACACGTGGCTGGATGCTC
TGGTAGACGTGAAACGACGACGGTTGCTCAACAGCCCCTCACCTCAACCA
TCATCTACATCTTTTTCGCGAAGGCACGATACGAACAACAATGCCACCAG
CACTAGTAACATCGATAACTGCAACATCAGTAGCAAGATTATGTACACGG
GACAACACCGTGCCCAATCACAGCCACACCCACGACAACAACAAGCCAAG
TATTCCCTCCCTCCCTCCGCTTCTCATCGCTCCGATCACGACGCTCTTTC
CCGTTCTTTCGATTGTTTAGCTTTGGAAGATTGTTACAGGAGCACATGCG
CCCACCACAAGGCAGGGAGATCCAGCACCAGCACCAGCAGCACCAGCACC
AGCACCAGCAGCAGCAGCAGCAGCGGGACTTCTTTCACCGCCGCCATGCC
GAATGTACAGGAAAGGGGTGGGGTGGAAAGGAGGAGGAAGGAAGAACTGA
AGATCTTTGTTGGGAAGGAGGGGAAAGAGGAGGAGGATGATTGGGCGGAC
GAAGAAGAGATTGTGGGTTTGTTGGAGAGGAATGAGGCTGAGCTGCAGGA
AGCAGGTCTAATCAAATCGTTGTGCGCGTCACAACGATAGTAGCGCCAGC
TGGTACATATACCTGGAATGTGAAGTTTGCCTGTTGTTTGACAAGCAAGA
GAAAGAATACAGCAACTGGATTGAAAATGGTCGTAATAATAAAAACAAAA
ATAGCACCAGTGAATGTAGAAGAGGCATTTATTTATGAGGAGGAAAATCA
AGACAGCGAGACAAACAAATGTACGCGGATGACAAAGTTTTAAACGAGGA
ACCATTTTATCCCAATATTTCCAAAAGAGAAGTTGACAGAGACATGCAAT
TTTGCAGCATACCATACATATTTAAAAAATCACGAAACGTGCATGTATTA
ATGT
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protein sequence of NO03G01780.1

>NO03G01780.1-protein ID=NO03G01780.1-protein|Name=NO03G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=563bp
MELRSPNWAGENLPPAANGHHSRAPSSITTPAARAPIVTRVRPSSPGLRM
LTSPRPMAVGAAPGAAAGPPSSYSFHFPSVLSTSFAYPKIDIHRRMDMSV
SRRAMDSNGNSESFGMMDATAARNGVRRHHHTRELAPAGATAASATAVPP
PPHSPLPVDAAGNFSISIAAASFSPLEDGVMFAFDSPSSSAMQGSPTKHA
VVVAAAAAAAAPITAIGTATCSSSSCGDRAVPSFNKLCPNLSPPPLPAAA
ISTAAPRAAVEAVLPMIMTAPPPSPAHSPLHSPIARRPRHEKVFLQAFTV
GQHISISQQQQQQQQQQQQQDHHPPNWSSSRSDCNHEFQNEAHTAATAAA
FLDSTSSNNNNTWLDALVDVKRRRLLNSPSPQPSSTSFSRRHDTNNNATS
TSNIDNCNISSKIMYTGQHRAQSQPHPRQQQAKYSLPPSASHRSDHDALS
RSFDCLALEDCYRSTCAHHKAGRSSTSTSSTSTSTSSSSSSGTSFTAAMP
NVQERGGVERRRKEELKIFVGKEGKEEEDDWADEEEIVGLLERNEAELQE
AGLIKSLCASQR*
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Synonyms
Publications