NO03G01420, NO03G01420 (gene) Nannochloropsis oceanica

Overview
NameNO03G01420
Unique NameNO03G01420
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2226
Alignment locationchr3:437859..440084 -

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Properties
Property NameValue
DescriptionCholine transporter
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:437859..440084 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007603Choline_transptr-like
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO03G01420 vs. NCBI_GenBank
Match: XP_005855337.1 (hypothetical protein NGA_0093200 [Nannochloropsis gaditana CCMP526] >EKU21012.1 hypothetical protein NGA_0093200 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 909.8 bits (2350), Expect = 5.400e-261
Identity = 460/570 (80.70%), Postives = 510/570 (89.47%), Query Frame = 0
Query:   46 MDDEDVLLDRNTVGASRSADLGAPLL----SSNTPTDGGAGASYIPSTLRRRRLWFDNVFGVVFGVFAFVMTLLALTIGVKAVVNRRTPAVVMLDEGTSDIADPTHPGTRHVTYEGFKLFTGLMLICTLGVVLSALWMQLMVTCAPALLTYTLMAVALLGLFGSAAFLAGANPWAGVITLLVTLTALVYFQQFRRRMAFATANLKVACRALWDSTPLLGVGLGLLLLQVGWGVLWALALVGAATNADLTTLKDPVSGTVYSMSQCTTYETLGPNANFTSTCVTAGEVCMKCVCGSGAEAVTMWEGRVCFTYKLYAGWLVVLLLGFLWGCSVIRNVGHCCVAGTVGTWWVSGGERASSSVGPHFRRAITTSFGSICLGSLLVAIVQTTRHVLLNAHRANQRTVQSNTITAMLSCVLVVVDRALAWFNRYALVYVALYGLDFMSAGKATTELFKARGVSALVNDTLIEGVLTLGTMIVGLLCALVGWLYGRDWGLSQANIAILGVSGAFIGVALAGVVAGLVESSVCTTFVLFAEDPQSLEISHGGAGKEGEMCEELMQAWEDVLQGPLSGM 612
            MDDED+LLD   VG  R ADLGAPLL    S++    GG GA+Y+P+T+RRRRLWFDNVFGV+FG+FAFVMTLLALTIGVKAV+NRRTPAVV+LDEGTS + DP HPGTRH TYEGFKLF+GL LICTLGVVLSALW+Q+MVTC+ ALLTYTLMAVALLGL    AF AGANPWAGV+TLLVT+ ALVYFQQ RRRMAFATANLK+ACRALWDS PLLGVG+GLLLLQV WG+LWALAL+GAATNADL TL+DPVSG VY MSQCTTYETLGPN NFT+ C+  G+ C+KCVCGSG  AVT+WE R CF YKLYAGWLVVLL GFLWG +V+RNVGHC V+GTVGTWWVSG ER ++SVG HFRR+++TSFGSICLGSLLVA+VQT RHVLLNAHRANQRTVQSNTITAML C+LV+VDRALAWFNRYALVYVALYGLDFMSAGKATTELF+ARGV+ALVNDT+IEGVL+LG +IVGLLCAL G+LYGRDWG+SQAN+AILGVSGAFIGV LAGVV+GLVES+VCTTFVLFAEDPQSLEISHG     GE CEEL+QAWEDVLQGPLSGM
Sbjct:    1 MDDEDILLDSRAVGGKRGADLGAPLLLPSSSASGGDQGGFGAAYVPATVRRRRLWFDNVFGVIFGIFAFVMTLLALTIGVKAVINRRTPAVVVLDEGTSSVDDPAHPGTRHATYEGFKLFSGLALICTLGVVLSALWLQVMVTCSSALLTYTLMAVALLGLLAGTAFFAGANPWAGVVTLLVTVIALVYFQQLRRRMAFATANLKIACRALWDSPPLLGVGVGLLLLQVCWGILWALALMGAATNADLATLRDPVSGQVYPMSQCTTYETLGPNGNFTAACLHTGQTCLKCVCGSGISAVTVWEDRSCFAYKLYAGWLVVLLAGFLWGGAVVRNVGHCTVSGTVGTWWVSGRERGAASVGSHFRRSLSTSFGSICLGSLLVALVQTARHVLLNAHRANQRTVQSNTITAMLGCLLVLVDRALAWFNRYALVYVALYGLDFMSAGKATTELFRARGVTALVNDTMIEGVLSLGVVIVGLLCALTGYLYGRDWGISQANVAILGVSGAFIGVGLAGVVSGLVESAVCTTFVLFAEDPQSLEISHG-----GEACEELVQAWEDVLQGPLSGM 565          
BLAST of NO03G01420 vs. NCBI_GenBank
Match: EWM29568.1 (Choline transporter [Nannochloropsis gaditana])

HSP 1 Score: 909.8 bits (2350), Expect = 5.400e-261
Identity = 460/570 (80.70%), Postives = 510/570 (89.47%), Query Frame = 0
Query:   46 MDDEDVLLDRNTVGASRSADLGAPLL----SSNTPTDGGAGASYIPSTLRRRRLWFDNVFGVVFGVFAFVMTLLALTIGVKAVVNRRTPAVVMLDEGTSDIADPTHPGTRHVTYEGFKLFTGLMLICTLGVVLSALWMQLMVTCAPALLTYTLMAVALLGLFGSAAFLAGANPWAGVITLLVTLTALVYFQQFRRRMAFATANLKVACRALWDSTPLLGVGLGLLLLQVGWGVLWALALVGAATNADLTTLKDPVSGTVYSMSQCTTYETLGPNANFTSTCVTAGEVCMKCVCGSGAEAVTMWEGRVCFTYKLYAGWLVVLLLGFLWGCSVIRNVGHCCVAGTVGTWWVSGGERASSSVGPHFRRAITTSFGSICLGSLLVAIVQTTRHVLLNAHRANQRTVQSNTITAMLSCVLVVVDRALAWFNRYALVYVALYGLDFMSAGKATTELFKARGVSALVNDTLIEGVLTLGTMIVGLLCALVGWLYGRDWGLSQANIAILGVSGAFIGVALAGVVAGLVESSVCTTFVLFAEDPQSLEISHGGAGKEGEMCEELMQAWEDVLQGPLSGM 612
            MDDED+LLD   VG  R ADLGAPLL    S++    GG GA+Y+P+T+RRRRLWFDNVFGV+FG+FAFVMTLLALTIGVKAV+NRRTPAVV+LDEGTS + DP HPGTRH TYEGFKLF+GL LICTLGVVLSALW+Q+MVTC+ ALLTYTLMAVALLGL    AF AGANPWAGV+TLLVT+ ALVYFQQ RRRMAFATANLK+ACRALWDS PLLGVG+GLLLLQV WG+LWALAL+GAATNADL TL+DPVSG VY MSQCTTYETLGPN NFT+ C+  G+ C+KCVCGSG  AVT+WE R CF YKLYAGWLVVLL GFLWG +V+RNVGHC V+GTVGTWWVSG ER ++SVG HFRR+++TSFGSICLGSLLVA+VQT RHVLLNAHRANQRTVQSNTITAML C+LV+VDRALAWFNRYALVYVALYGLDFMSAGKATTELF+ARGV+ALVNDT+IEGVL+LG +IVGLLCAL G+LYGRDWG+SQAN+AILGVSGAFIGV LAGVV+GLVES+VCTTFVLFAEDPQSLEISHG     GE CEEL+QAWEDVLQGPLSGM
Sbjct:    1 MDDEDILLDSRAVGGKRGADLGAPLLLPSSSASGGDQGGFGAAYVPATVRRRRLWFDNVFGVIFGIFAFVMTLLALTIGVKAVINRRTPAVVVLDEGTSSVDDPAHPGTRHATYEGFKLFSGLALICTLGVVLSALWLQVMVTCSSALLTYTLMAVALLGLLAGTAFFAGANPWAGVVTLLVTVIALVYFQQLRRRMAFATANLKIACRALWDSPPLLGVGVGLLLLQVCWGILWALALMGAATNADLATLRDPVSGQVYPMSQCTTYETLGPNGNFTAACLHTGQTCLKCVCGSGISAVTVWEDRSCFAYKLYAGWLVVLLAGFLWGGAVVRNVGHCTVSGTVGTWWVSGRERGAASVGSHFRRSLSTSFGSICLGSLLVALVQTARHVLLNAHRANQRTVQSNTITAMLGCLLVLVDRALAWFNRYALVYVALYGLDFMSAGKATTELFRARGVTALVNDTMIEGVLSLGVVIVGLLCALTGYLYGRDWGISQANVAILGVSGAFIGVGLAGVVSGLVESAVCTTFVLFAEDPQSLEISHG-----GEACEELVQAWEDVLQGPLSGM 565          
BLAST of NO03G01420 vs. NCBI_GenBank
Match: XP_009836062.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV74404.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 183.3 bits (464), Expect = 2.700e-42
Identity = 150/478 (31.38%), Postives = 228/478 (47.70%), Query Frame = 0
Query:  139 TSDIADPTHPGTRHVTYEGFKLFTGLMLI----CTLGVVLSALWMQLMVTCAPALLTYTL-MAVALLGLFGSAAFLAGANPWAGVITLLVTLTALVYFQQFRRRMAFATANLKVACRALWDSTPLLGVGLGLLLLQVGWGVLWALALVGAATNADLTTLKDPVSGTVYSMSQCTTYETLGPNANFTSTCVTAGEVCMKCVCGSGAEAVTMWEGRVCFTYKLYAGWLVVLLLGFLWGCSVIRNVGHCCVAGTVGTWWVSGGERASSSVGPHFRRAITTSFGSICLGSLLVAIVQTTRHVL--LNAHRANQRTVQSNTITAMLSCVLVVVDRALAWFNRYALVYVALYGLDFMSAGKATTELFKARGVSALVNDTLIEGVLTLGTMIVGLLCALVGWLYGR----DWGL-----SQANIAILGVSGAFIGVALAGVVAGLVESSVCTTFVLFAEDPQSLEISHGGAGKEGEMCEELMQAW 601
            TS +    H  + H +    K FT ++ +        VV SALW+Q+++ CA  ++ + L M V +  +FG A      NP+ G+  LL     + Y    + R+AFA+A+LK+AC AL +   +  + L  + +QV W V W+L+ VG      L    DP          C   E+ G                   +CG     VT++                 LL+   WG  VI+NV  C VAGTV TWW +   R  S+V     R++T+SFGSIC GSL+VA++Q  R ++  +    A    V    +  +  C+L  ++  + +FN +A  YV +YG DF SAGKA  +LF +RG +A++ND L    L++G   VG+L  ++G +  +    DW +           I G  G   G ++A ++A LV +++ T FV FAEDP S + SH       E   EL+  W
Sbjct:   65 TSGLDYLKHFESEHPSQAAHKSFTMVLGVSGGLIGFAVVFSALWIQVLMACAENMIRFALWMNVGM--MFGFAIMSMFVNPFMGLFFLLGAAINICYINAVQNRIAFASAHLKLACVALSNHKSIFALALLFIFVQVAWLVTWSLSAVGV---YQLFRSADP---------SCEQEESRGE------------------LCGGAGFNVTIF----------------FLLVSVYWGQQVIQNVMTCTVAGTVATWWYNA--RTESAVAGSLYRSLTSSFGSICFGSLIVAVLQALRTIVRTIKNKAAEDDNVGLACVACLAECILNCIESLVEYFNMWAYTYVGIYGFDFRSAGKAVMQLFDSRGWTAVINDDLSSTALSIGAFGVGVLTGVIGLVVAKFAPVDWTVGFGADDTTRYVIFGGLGFIAGFSMAMILANLVITALHTIFVCFAEDPVSFQRSH------PEHYNELILTW 486          
BLAST of NO03G01420 vs. NCBI_GenBank
Match: XP_009837251.1 (hypothetical protein H257_11876 [Aphanomyces astaci] >ETV73376.1 hypothetical protein H257_11876 [Aphanomyces astaci])

HSP 1 Score: 181.4 bits (459), Expect = 1.000e-41
Identity = 157/472 (33.26%), Postives = 222/472 (47.03%), Query Frame = 0
Query:  138 GTSDIADPTHPGTRHVTYEGFKLFTGLML---ICTLGVVLSALWMQLMVTCAPALLTYTLMAVALLGLFGSAAF-LAGANPWAGVITLLVTLTALVYFQQFRRRMAFATANLKVACRALWDSTPLLGVGLGLLLLQVGWGVLWALALVGAATNADLTTLKDPVS--GTVYSMSQCTTYETLGPNANFTSTCVTAGEVCMKCVCGSG-AEAVTMWEGRVCFTYKLYAGWLVVLLLGFLWGCSVIRNVGHCCVAGTVGTWWVSGGERASSSVGPHFRRAITTSFGSICLGSLLVAIVQTTRHVLLNAHRANQRTVQSNTITAMLSCVLVVVDRALAWFNRYALVYVALYGLDFMSAGKATTELFKARGVSALVNDTLIEGVLTLGTMIVGLLCALVGWLYGRDWGLSQANIA--ILGVSGAFIGVALAGVVAGLVESSVCTTFVLFAEDPQSLEISHGGAGKEGEMCEELMQAW 601
            GTS  A P+       T+    + T L L   +  +  VLS   +   +  A  ++   L    ++  FG AAF +   N    ++T ++ L AL Y    + R+ FA ANL+ A  A+        V    LL+Q+ W  +WA A+VG        +   P S   TV S  +C                  A   C+   C SG  +   ++      +Y  Y      LLL F WG  V +N+ H  VAGTV TWW S   + ++  G    RA TTS GSIC GSL+VA++QT R +   A R      Q +    +  C+L  +   +  FNR+A VYV +YG  FM AG+A  +LF  RG  A++ND L+   LT     VG LCAL+G +Y      +Q   A  IL ++G F G+ +A +  G+V+S+V T FV FAEDP +L+ SH       E   ELM  W
Sbjct:   88 GTSKTAFPSSSS----TFSSDNVTTILYLCAGLTVIAAVLSLAMLSFTIRYARQMIQIALWWSVVM-FFGFAAFAVIKKNYTVAIVTGIIGLFALCYAYAVQDRIPFAAANLRAAGAAIRKHPSTHLVAFVFLLVQIAWVFVWAFAVVGITNKLTENSTPAPTSRTATVASGGRC-----------------IASAQCLTNYCTSGVCKEPNVYAQLKSTSYVAY----FFLLLSFFWGVQVFKNIIHATVAGTVATWWFSSDSKGAT--GASLGRATTTSLGSICFGSLIVAVLQTLRQLAEEASR------QGDCAACIAQCILGCLQSLMETFNRWAFVYVGIYGYKFMDAGRAVMQLFHDRGFDAIINDDLVGTALTFAAFGVGCLCALLGLVYYYIDVSNQFQYAEYILPLTGLFFGLGVAIIPMGVVDSAVATIFVCFAEDPVALQHSH------PEHFNELMTEW 519          
BLAST of NO03G01420 vs. NCBI_GenBank
Match: GAX92879.1 (Hypothetical protein PINS_000783 [Pythium insidiosum])

HSP 1 Score: 181.4 bits (459), Expect = 1.000e-41
Identity = 151/435 (34.71%), Postives = 218/435 (50.11%), Query Frame = 0
Query:  159 KLFTGLML-ICTLGVVLSALWMQLMVTCAPALLTYTL-------MAVALLGLFGSAAFLAGANPWAGVITLLVTLTALVYFQQFRRRMAFATANLKVACRALWDSTPLLGVGLGLLLLQVGWGVLWALALVGAATNADLTTLKDPVSGTVYSMSQCTTYETLGPNANFTSTCVTAGEVCMKCVCGSGAEAVTMWEGRVCFTYKLYAGWLVVLLLGFLWGCSVIRNVGHCCVAGTVGTWWVSGGERASSSVGPHFRRAITTSFGSICLGSLLVAIVQTTRHVLLNAHRANQRTVQSNTITAMLSCVLVVVDRALAWFNRYALVYVALYGLDFMSAGKATTELFKARGVSALVNDTLIEGVLTLGTMIVGLLCALVGWLYGR--DWGLSQANIAILGVSGAFIGVALAGVVAGLVESSVCTTFVLFAEDPQSLEISH 584
            K+  G+ L +  L VVL+ L ++L+V  A  ++ +TL        AVA LG +  + FL       GV  L+  L  L Y +  + R+ FA ANLKVA  A+        V +   ++Q+ W V WA+AL+G A +  L     P S  +            G      S C  A   C    C  GA   T ++      Y +Y      +L+ F WG  V +NV H  +AGTV T+W +    ++ + G   +R++TTSFGSIC GSLLVAIVQ  R +      ANQ   + + +  +  C+L  +   L + NR+A VYV +YG  F  AGKA  +LF  RG  A++ND LI  VL+   + VGL+CA VG  +    D      ++  LG+ G  +GV +A     +++SSV T FV FAEDP + + SH
Sbjct:  128 KVTLGVALGMSVLAVVLALLSVKLIVAYARCMINFTLWFSVXLSFAVAGLGFYIGSIFL-------GVFGLIXALLGLCYARAVQHRIPFAAANLKVAAAAISKHWSTYLVAILFTIVQIVWVVAWAIALLGVANH--LRKEDGPSSAGL---------RNEGERCFSNSDC--ASSSCRNNRCYGGA---TFYKDS-AVNYVIY----FFMLVSFYWGLQVFKNVSHTTIAGTVATFWYNA--ESAGATGSSLKRSMTTSFGSICFGSLLVAIVQALREL------ANQAREEGSFLGCIAECLLGCLQAILEYINRWAFVYVGIYGYKFTQAGKAVFDLFHNRGFDAIINDDLIGNVLSFAALGVGLICAGVGVAFAHFTDEVSYSNSMLFLGILGFIVGVGVAVTPLSVIDSSVATIFVCFAEDPVAFQQSH 526          
BLAST of NO03G01420 vs. NCBI_GenBank
Match: ETI40021.1 (hypothetical protein F443_14464 [Phytophthora parasitica P1569] >ETL33562.1 hypothetical protein L916_14007 [Phytophthora parasitica] >ETL86845.1 hypothetical protein L917_13797 [Phytophthora parasitica] >ETO68727.1 hypothetical protein F444_14462 [Phytophthora parasitica P1976] >ETP09890.1 hypothetical protein F441_14342 [Phytophthora parasitica CJ01A1] >ETP37957.1 hypothetical protein F442_14306 [Phytophthora parasitica P10297])

HSP 1 Score: 181.0 bits (458), Expect = 1.300e-41
Identity = 149/484 (30.79%), Postives = 227/484 (46.90%), Query Frame = 0
Query:  124 VVNRRTPAVVMLDEGTSDIADPTHPGTRHVTYEGFKLFTGLML-ICTLGVVLSALWMQLMVTCAPALLTYTL-MAVALLGLFGSAAFLAGANPWAGVITLLVTLTALVYFQQFRRRMAFATANLKVACRALWDSTPLLGVGLGLLLLQVGWGVLWALALVGAATNADLTTLKDPVSGTVYSMSQCTTYETLGPNANFTSTCVTAGEVCMKCVCGSGAEAVTMWEGRVCFTYKLYAGWLVVLLLGFLWGCSVIRNVGHCCVAGTVGTWWVSGGERASSSVGPHFRRAITTSFGSICLGSLLVAIVQTTRHVLLNAHRANQRTVQSNTITAMLSCVLVVVDRALAWFNRYALVYVALYGLDFMSAGKATTELFKARGVSALVNDTLIEGVLTLGTMIVGLLCALVGWLYGR--DWGLSQANIAILGVSGAFIGVALAGVVAGLVESSVCTTFVLFAEDPQSLEISHGGAGKEGEMCEELMQAWEDV 604
            V+N      +M+  G   + DP +  +  ++ +  K+  G+ + +  + +VL+ L ++L+V  A  ++ + L   V +   F +  F+ G N + G+I LL+ +  L Y +  + R+ FA ANL+VA  A+        V L   ++Q+GW V+WA+AL+G A                                N +S               SG   V  +                 LLL F WG  V +NV H  VAGTV T+W      +  + G   +RA TTSFGSIC GSL+VA +Q  R +  N+ +        + +     C+L  +   + +FNR+A VYV +YG  F  AGKA  ELFK RG  A++ND LI  VL    + VGL+CA VG L     D    Q + A L + G  +G+ +A     +++SSV T FV FAEDP + + SH       E+   L+Q W ++
Sbjct:   45 VLNVGVIIALMVLWGVDTVTDPENNSSELMSGDDTKVVVGIAVGMAGVSMVLALLMVKLIVAYARVMILFVLWFNVGISFAFAAFGFIIG-NIFIGIIGLLIAMLNLCYARAVQHRIPFAVANLRVAEGAISKHGSTYIVSLVFTIVQIGWVVIWAMALLGVANEI--------------------------AENNPSSXXXXXXXXXXXXYKQSGGSYVAYF----------------FLLLSFYWGLQVFKNVAHTTVAGTVATFWYQ--SESMGATGASLKRATTTSFGSICFGSLIVAFLQALRALAENSRQ------DGSALACFAECILGCLQSLMEYFNRWAYVYVGIYGYKFTQAGKAVFELFKQRGFDAIINDDLIGNVLGFAALGVGLICAGVGALIAETTDAVSFQNSTATLAILGLVVGIGVAVTPLAVIDSSVATIFVCFAEDPAAFQRSH------PELYAPLVQEWHNL 471          
BLAST of NO03G01420 vs. NCBI_GenBank
Match: XP_008876794.1 (hypothetical protein H310_11800 [Aphanomyces invadans] >ETV94479.1 hypothetical protein H310_11800 [Aphanomyces invadans])

HSP 1 Score: 181.0 bits (458), Expect = 1.300e-41
Identity = 143/443 (32.28%), Postives = 215/443 (48.53%), Query Frame = 0
Query:  170 LGVVLSALWMQLMVTCAPALLTYTL-MAVALLGLFGSAAFLAGANPWAGVITLLVTLTALVYFQQFRRRMAFATANLKVACRALWDSTPLLGVGLGLLLLQVGWGVLWALALVGAATNADLTTLKDPVSGTVYSMSQCTTYETLGPNANFTSTCVTAGEVCMKCVCGSGAEAVTMWEGRVCFTYKLYAGWLVVLLLGFLWGCSVIRNVGHCCVAGTVGTWWVSGGERASSSVGPHFRRAITTSFGSICLGSLLVAIVQTTRHVL--LNAHRANQRTVQSNTITAMLSCVLVVVDRALAWFNRYALVYVALYGLDFMSAGKATTELFKARGVSALVNDTLIEGVLTLGTMIVGLLCALVGWLYGR----DW-----GLSQANIAILGVSGAFIGVALAGVVAGLVESSVCTTFVLFAEDPQSLEISHGGAGKEGEMCEELMQAW 601
            L VV SALW+Q+++ CA  ++ + L M V L  +FG A      NP+ G+  LL     + Y    + R+AFA+A+LK+AC AL     +  + L  +L+QV W + W+++ VG      L  + DP          C   E+ G                   +CG     V ++                 LL+   WG  VI+NV  C VAGTV TWW +       +V     R++T+SFGSIC GSL+VA++Q  R ++  +    A         +  +  C+L  ++  + +FN +A  YV +YG DF +AGKA  +LF +RG +A++ND L    L++G   VG+L  +VG +  +    DW     G       I GV G   GV++A ++A LV +++ T FV FAEDP S + SH       E   EL+  W
Sbjct:  102 LSVVFSALWIQVLMACAENMIRFALWMNVGL--MFGFAIMSLFVNPFVGLFFLLGAAINICYINAVQNRIAFASAHLKLACVALSKHKSIFVLALFFILVQVAWLITWSVSAVGV---YQLFRVADP---------NCEKEESHG------------------TLCGGTGFNVAIF----------------FLLVSVYWGQQVIQNVMTCTVAGTVATWWYN--THTDRAVAGSLYRSLTSSFGSICFGSLIVAVLQALRTIVRTIKNKAAEDDNAALACVACLAECILNCIESLVEYFNMWAYTYVGIYGFDFRTAGKAVMQLFDSRGWTAVINDDLSSTALSIGAFGVGVLTCVVGLVVAKFAPADWVAGFGGDDTTRYVIFGVLGFIAGVSMAMILANLVITALHTIFVCFAEDPVSFQRSH------PEHYNELILTW 488          
BLAST of NO03G01420 vs. NCBI_GenBank
Match: ETI40022.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETI40023.1 hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETL33563.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL33564.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL86846.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL86847.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETO68728.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETO68729.1 hypothetical protein, variant 2 [Phytophthora parasitica P1976] >ETP09891.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >ETP09892.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >ETP37958.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297] >ETP37959.1 hypothetical protein, variant 2 [Phytophthora parasitica P10297])

HSP 1 Score: 180.6 bits (457), Expect = 1.700e-41
Identity = 146/470 (31.06%), Postives = 221/470 (47.02%), Query Frame = 0
Query:  138 GTSDIADPTHPGTRHVTYEGFKLFTGLML-ICTLGVVLSALWMQLMVTCAPALLTYTL-MAVALLGLFGSAAFLAGANPWAGVITLLVTLTALVYFQQFRRRMAFATANLKVACRALWDSTPLLGVGLGLLLLQVGWGVLWALALVGAATNADLTTLKDPVSGTVYSMSQCTTYETLGPNANFTSTCVTAGEVCMKCVCGSGAEAVTMWEGRVCFTYKLYAGWLVVLLLGFLWGCSVIRNVGHCCVAGTVGTWWVSGGERASSSVGPHFRRAITTSFGSICLGSLLVAIVQTTRHVLLNAHRANQRTVQSNTITAMLSCVLVVVDRALAWFNRYALVYVALYGLDFMSAGKATTELFKARGVSALVNDTLIEGVLTLGTMIVGLLCALVGWLYGR--DWGLSQANIAILGVSGAFIGVALAGVVAGLVESSVCTTFVLFAEDPQSLEISHGGAGKEGEMCEELMQAWEDV 604
            G   + DP +  +  ++ +  K+  G+ + +  + +VL+ L ++L+V  A  ++ + L   V +   F +  F+ G N + G+I LL+ +  L Y +  + R+ FA ANL+VA  A+        V L   ++Q+GW V+WA+AL+G A                                N +S               SG   V  +                 LLL F WG  V +NV H  VAGTV T+W      +  + G   +RA TTSFGSIC GSL+VA +Q  R +  N+ +        + +     C+L  +   + +FNR+A VYV +YG  F  AGKA  ELFK RG  A++ND LI  VL    + VGL+CA VG L     D    Q + A L + G  +G+ +A     +++SSV T FV FAEDP + + SH       E+   L+Q W ++
Sbjct:    5 GVDTVTDPENNSSELMSGDDTKVVVGIAVGMAGVSMVLALLMVKLIVAYARVMILFVLWFNVGISFAFAAFGFIIG-NIFIGIIGLLIAMLNLCYARAVQHRIPFAVANLRVAEGAISKHGSTYIVSLVFTIVQIGWVVIWAMALLGVANEI--------------------------AENNPSSXXXXXXXXXXXXYKQSGGSYVAYF----------------FLLLSFYWGLQVFKNVAHTTVAGTVATFWYQ--SESMGATGASLKRATTTSFGSICFGSLIVAFLQALRALAENSRQ------DGSALACFAECILGCLQSLMEYFNRWAYVYVGIYGYKFTQAGKAVFELFKQRGFDAIINDDLIGNVLGFAALGVGLICAGVGALIAETTDAVSFQNSTATLAILGLVVGIGVAVTPLAVIDSSVATIFVCFAEDPAAFQRSH------PELYAPLVQEWHNL 417          
BLAST of NO03G01420 vs. NCBI_GenBank
Match: XP_008910115.1 (hypothetical protein PPTG_14520 [Phytophthora parasitica INRA-310] >ETN04721.1 hypothetical protein PPTG_14520 [Phytophthora parasitica INRA-310])

HSP 1 Score: 179.5 bits (454), Expect = 3.900e-41
Identity = 148/484 (30.58%), Postives = 226/484 (46.69%), Query Frame = 0
Query:  124 VVNRRTPAVVMLDEGTSDIADPTHPGTRHVTYEGFKLFTGLML-ICTLGVVLSALWMQLMVTCAPALLTYTL-MAVALLGLFGSAAFLAGANPWAGVITLLVTLTALVYFQQFRRRMAFATANLKVACRALWDSTPLLGVGLGLLLLQVGWGVLWALALVGAATNADLTTLKDPVSGTVYSMSQCTTYETLGPNANFTSTCVTAGEVCMKCVCGSGAEAVTMWEGRVCFTYKLYAGWLVVLLLGFLWGCSVIRNVGHCCVAGTVGTWWVSGGERASSSVGPHFRRAITTSFGSICLGSLLVAIVQTTRHVLLNAHRANQRTVQSNTITAMLSCVLVVVDRALAWFNRYALVYVALYGLDFMSAGKATTELFKARGVSALVNDTLIEGVLTLGTMIVGLLCALVGWLYGR--DWGLSQANIAILGVSGAFIGVALAGVVAGLVESSVCTTFVLFAEDPQSLEISHGGAGKEGEMCEELMQAWEDV 604
            V+N      +M+  G   + DP +  +  ++ +  K+  G+ + +  + +VL+ L ++L+V  A  ++ + L   V +   F +  F+ G N + G+I LL+ +  L Y +  + R+ FA ANL+VA  A+        V L   ++Q+GW V+WA+AL+G A                                N +S               SG   V  +                 LLL F WG  V +NV H  VAGTV T+W      +  + G   +RA TTSFGSIC GSL+VA +Q  R +  N+ +        + +     C+L  +   + +FNR+A VYV +YG  F  AGKA  ELFK RG  A++ND LI  VL    + VGL+CA  G L     D    Q + A L + G  +G+ +A     +++SSV T FV FAEDP + + SH       E+   L+Q W ++
Sbjct:   45 VLNVGVIIALMVLWGVDTVTDPENNSSELMSGDDTKVVVGIAVGMAGVSMVLALLMVKLIVAYARVMILFVLWFNVGISFAFAAFGFIIG-NIFIGIIGLLIAMLNLCYARAVQHRIPFAVANLRVAEGAISKHGSTYIVSLVFTIVQIGWVVIWAMALLGVANEI--------------------------AENNPSSXXXXXXXXXXXXYKQSGGSYVAYF----------------FLLLSFYWGLQVFKNVAHTTVAGTVATFWYQ--SESMGATGASLKRATTTSFGSICFGSLIVAFLQALRALAENSRQ------DGSALACFAECILGCLQSLMEYFNRWAYVYVGIYGYKFTQAGKAVFELFKQRGFDAIINDDLIGNVLGFAALGVGLICAGAGALIAETTDAVSFQNSTATLAILGLVVGIGVAVTPLAVIDSSVATIFVCFAEDPAAFQRSH------PELYAPLVQEWHNL 471          
BLAST of NO03G01420 vs. NCBI_GenBank
Match: KUF81700.1 (Metal transporter CNNM4 [Phytophthora nicotianae])

HSP 1 Score: 179.5 bits (454), Expect = 3.900e-41
Identity = 148/484 (30.58%), Postives = 226/484 (46.69%), Query Frame = 0
Query:  124 VVNRRTPAVVMLDEGTSDIADPTHPGTRHVTYEGFKLFTGLML-ICTLGVVLSALWMQLMVTCAPALLTYTL-MAVALLGLFGSAAFLAGANPWAGVITLLVTLTALVYFQQFRRRMAFATANLKVACRALWDSTPLLGVGLGLLLLQVGWGVLWALALVGAATNADLTTLKDPVSGTVYSMSQCTTYETLGPNANFTSTCVTAGEVCMKCVCGSGAEAVTMWEGRVCFTYKLYAGWLVVLLLGFLWGCSVIRNVGHCCVAGTVGTWWVSGGERASSSVGPHFRRAITTSFGSICLGSLLVAIVQTTRHVLLNAHRANQRTVQSNTITAMLSCVLVVVDRALAWFNRYALVYVALYGLDFMSAGKATTELFKARGVSALVNDTLIEGVLTLGTMIVGLLCALVGWLYGR--DWGLSQANIAILGVSGAFIGVALAGVVAGLVESSVCTTFVLFAEDPQSLEISHGGAGKEGEMCEELMQAWEDV 604
            V+N      +M+  G   + DP +  +  ++ +  K+  G+ + +  + +VL+ L ++L+V  A  ++ + L   V +   F +  F+ G N + G+I LL+ +  L Y +  + R+ FA ANL+VA  A+        V L   ++Q+GW V+WA+AL+G A                                N +S               SG   V  +                 LLL F WG  V +NV H  VAGTV T+W      +  + G   +RA TTSFGSIC GSL+VA +Q  R +  N+ +        + +     C+L  +   + +FNR+A VYV +YG  F  AGKA  ELFK RG  A++ND LI  VL    + VGL+CA  G L     D    Q + A L + G  +G+ +A     +++SSV T FV FAEDP + + SH       E+   L+Q W ++
Sbjct:   45 VLNVGVIIALMVLWGVDTVTDPENNSSELMSGDDTKVVVGIAVGMAGVSMVLALLMVKLIVAYARVMILFVLWFNVGISFAFAAFGFIIG-NIFIGIIGLLIAMLNLCYARAVQHRIPFAVANLRVAEGAISKHGSTYIVSLVFTIVQIGWVVIWAMALLGVANEI--------------------------AENNPSSXXXXXXXXXXXXYKQSGGSYVAYF----------------FLLLSFYWGLQVFKNVAHTTVAGTVATFWYQ--SESMGATGASLKRATTTSFGSICFGSLIVAFLQALRALAENSRQ------DGSALACFAECILGCLQSLMEYFNRWAYVYVGIYGYKFTQAGKAVFELFKQRGFDAIINDDLIGNVLGFAALGVGLICAGAGALIAETTDAVSFQNSTATLAILGLVVGIGVAVTPLAVIDSSVATIFVCFAEDPAAFQRSH------PELYAPLVQEWHNL 471          
The following BLAST results are available for this feature:
BLAST of NO03G01420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855337.15.400e-26180.70hypothetical protein NGA_0093200 [Nannochloropsis ... [more]
EWM29568.15.400e-26180.70Choline transporter [Nannochloropsis gaditana][more]
XP_009836062.12.700e-4231.38hypothetical protein, variant [Aphanomyces astaci]... [more]
XP_009837251.11.000e-4133.26hypothetical protein H257_11876 [Aphanomyces astac... [more]
GAX92879.11.000e-4134.71Hypothetical protein PINS_000783 [Pythium insidios... [more]
ETI40021.11.300e-4130.79hypothetical protein F443_14464 [Phytophthora para... [more]
XP_008876794.11.300e-4132.28hypothetical protein H310_11800 [Aphanomyces invad... [more]
ETI40022.11.700e-4131.06hypothetical protein, variant 1 [Phytophthora para... [more]
XP_008910115.13.900e-4130.58hypothetical protein PPTG_14520 [Phytophthora para... [more]
KUF81700.13.900e-4130.58Metal transporter CNNM4 [Phytophthora nicotianae][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL070nonsL070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005765NSK005765Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G01420.1NO03G01420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|548935gene_1320Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100006g81gene1046Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G01420.1NO03G01420.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G01420 ID=NO03G01420|Name=NO03G01420|organism=Nannochloropsis oceanica|type=gene|length=2226bp
ATGCCCGACGTGGCACATTTGTTCCCCGTGGCCAAGCCCACCCTTAGTGC
TTCATCGAGCCCCTCCGGAACGATCTCCTTCATCTCACTCGCGAACTTCT
CACAGCTCCCACCACAGAAAAACAAAACACTTGCCATGGACGACGAGGAC
GTCCTTTTGGACCGGAACACTGTAGGTGCCAGCCGTAGCGCTGACCTAGG
GGCCCCGCTGCTGTCATCTAACACACCTACCGATGGCGGTGCGGGAGCGT
CCTACATCCCTTCCACATTGCGACGCCGCCGGCTATGGTTTGACAATGTG
TTCGGGGTGGTCTTTGGAGTCTTTGCTTTCGTGATGACTCTTTTAGCGCT
GACGATTGGTGTCAAGGCAGTGGTGAATCGACGGACGCCCGCGGTGGTGA
TGCTTGATGAAGGCACTTCCGACATAGCGGATCCCACCCACCCCGGTACC
CGTCACGTGACCTATGAGGGATTCAAGCTTTTTACGGGCCTCATGCTCAT
TTGCACGTTGGGTGTGGTCTTGTCCGCGCTGTGGATGCAACTGATGGTTA
CCTGCGCCCCCGCCCTTTTGACTTATACGCTCATGGCAGTGGCTCTCCTC
GGTCTGTTCGGAAGCGCTGCGTTCTTGGCGGGTGCTAATCCCTGGGCGGG
GGTCATCACCTTGCTTGTAACGCTTACGGCATTGGTTTATTTCCAACAAT
TTCGAAGGCGCATGGCATTTGCGACCGCAAACTTAAAGGTGGCTTGTCGG
GCGTTGTGGGATAGCACTCCTCTTCTAGGGGTGGGGCTGGGCCTTCTCCT
GCTTCAGGTTGGCTGGGGAGTTCTGTGGGCATTGGCCTTGGTGGGCGCAG
CGACGAATGCAGATCTGACAACTCTAAAGGACCCGGTTTCGGGGACCGTT
TATTCGATGAGTCAATGCACGACGTACGAGACGCTTGGGCCGAACGCGAA
TTTTACGAGTACGTGCGTGACGGCGGGGGAGGTATGTATGAAGTGTGTTT
GTGGGAGTGGTGCGGAGGCAGTGACGATGTGGGAGGGAAGAGTGTGTTTT
ACGTACAAGCTGTATGCGGGTTGGTTGGTTGTGTTGTTGCTTGGGTTCCT
GTGGGGGTGTTCGGTGATTCGAAATGTGGGTCATTGCTGCGTGGCAGGGA
CTGTGGGAACGTGGTGGGTGAGTGGGGGTGAACGAGCAAGTAGCTCGGTA
GGGCCGCATTTTCGGAGGGCCATTACCACATCATTTGGTAGCATTTGCTT
GGGTTCGTTGCTGGTGGCGATTGTGCAGACGACGAGGCATGTGTTGTTGA
ATGCGCACAGGGCGAATCAGCGAACGGTGCAATCAAACACGATTACGGCC
ATGTTGAGTTGTGTGCTCGTAGTGGTTGACCGGGCATTGGCGTGGTTCAA
TCGGTATGCACTTGTGTATGTTGCACTTTATGGACTGGATTTTATGAGTG
CGGGAAAGGCGACCACGGAGCTGTTCAAGGCCCGGGGGGTGAGTGCTCTT
GTGAATGATACGTTGATTGAGGGAGTATTGACGCTCGGGACGATGATCGT
CGGCTTGTTGTGTGCGTTGGTTGGGTGGTTGTATGGGAGGGATTGGGGGT
TGAGTCAAGCGAATATCGCAATTTTGGGGGTGAGTGGAGCGTTTATAGGC
GTGGCTTTGGCGGGGGTGGTGGCAGGGTTGGTGGAGAGCAGCGTGTGCAC
CACCTTTGTGTTGTTTGCAGAGGATCCTCAGAGCCTGGAAATTAGCCATG
GGGGTGCGGGGAAAGAAGGGGAGATGTGTGAGGAGCTCATGCAGGCATGG
GAGGATGTTTTGCAAGGGCCTTTGTCGGGGATGGGAGGGATGATGGGGGG
CGGGGGAGGGAGGGAAGGAGGGAGGGAGGGCTTTAGGCCGCCGACATTAT
CATCTTCGCCGTCGCCGTTTGCGGCGGGGGCACCGCCAGCGTCGGGGAAG
AAAAACATACCTACCCCTCCTCCTCCACCACCACCACCCACAGCACCAAT
AGCCGCAACAACATCACCACCAACAGCAGAACCTCAGACTGCAGTAGAAA
AGGCGGTGGCAAATTTCGGGGGGGGCTCATCCTTGTTGATGGGGATGATG
GGAGGGAGTGGAAGCAGTGGAGGTAGCGGGGGAGAAAGGACGCCAGCGTT
GGACGTTAGCGAAGGGGAGCAGGAGGAGGAGGAGGAGGAAGATGGGGAGA
GGGAGGAGGAGGTCGAGGAGGTGTAA
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protein sequence of NO03G01420.1

>NO03G01420.1-protein ID=NO03G01420.1-protein|Name=NO03G01420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=742bp
MPDVAHLFPVAKPTLSASSSPSGTISFISLANFSQLPPQKNKTLAMDDED
VLLDRNTVGASRSADLGAPLLSSNTPTDGGAGASYIPSTLRRRRLWFDNV
FGVVFGVFAFVMTLLALTIGVKAVVNRRTPAVVMLDEGTSDIADPTHPGT
RHVTYEGFKLFTGLMLICTLGVVLSALWMQLMVTCAPALLTYTLMAVALL
GLFGSAAFLAGANPWAGVITLLVTLTALVYFQQFRRRMAFATANLKVACR
ALWDSTPLLGVGLGLLLLQVGWGVLWALALVGAATNADLTTLKDPVSGTV
YSMSQCTTYETLGPNANFTSTCVTAGEVCMKCVCGSGAEAVTMWEGRVCF
TYKLYAGWLVVLLLGFLWGCSVIRNVGHCCVAGTVGTWWVSGGERASSSV
GPHFRRAITTSFGSICLGSLLVAIVQTTRHVLLNAHRANQRTVQSNTITA
MLSCVLVVVDRALAWFNRYALVYVALYGLDFMSAGKATTELFKARGVSAL
VNDTLIEGVLTLGTMIVGLLCALVGWLYGRDWGLSQANIAILGVSGAFIG
VALAGVVAGLVESSVCTTFVLFAEDPQSLEISHGGAGKEGEMCEELMQAW
EDVLQGPLSGMGGMMGGGGGREGGREGFRPPTLSSSPSPFAAGAPPASGK
KNIPTPPPPPPPPTAPIAATTSPPTAEPQTAVEKAVANFGGGSSLLMGMM
GGSGSSGGSGGERTPALDVSEGEQEEEEEEDGEREEEVEEV*
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Synonyms
Publications