NO03G01320, NO03G01320 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G01320 vs. NCBI_GenBank
Match: EWM29528.1 (hypothetical protein Naga_100006g70 [Nannochloropsis gaditana]) HSP 1 Score: 320.1 bits (819), Expect = 8.500e-84 Identity = 181/344 (52.62%), Postives = 225/344 (65.41%), Query Frame = 0 Query: 56 GSRKLAL----ALFSSN----NDNNRSSGRLQMKDVLRPSAXXXXXXXXALTEWAAEVSLASLKEKLIQQPIQRIIPLITLISFVG-----------------------------------------IAPKFSPVMEGVFNLLLAYAALLSGFLVDGRKAGSRSS-------NVNFFLPFAAAGLALTNTAFLPYLVLRPLHKKDETCVRKEDVPQVELQLGEAKKLLAVYGLAGLYSVWWGFFARPEFGGLSARWASLIEMASTDRLMFAFCVEAVLFWVFQGWLVDDDMMRRTGAKKSGSLGEILVPSVAKVVPFVGLFMYMMWRPPLMDRGEGKIEEEGGR 344 G RK+ L L S N ++ + S+GR ++KDVLRP +WA E+S ASLK+K QQP QR+IPLITL++FVG +AP+FSPVMEGVFNLLLAYAALLSGFLVDGR+A +S +NFF PFAAAGLALTNTAFLPYL+LRPLHK D+ V +E+VP++EL+LGE+K LL+VYG+AGLYS+WW FF RPEFGGL+ RWAS ++ S+DRLMFAF VEAVL+W+FQGWLVDDDM RR ++ E +VP +AK VPF+GLF+YM+WRPPL+ + EE GR Sbjct: 46 GGRKVPLHQQFRLHSRNMMAYSNKHGSTGRRRVKDVLRPPLPPQTAVQG--NKWAEEISPASLKQKFTQQPFQRVIPLITLVTFVGYVFVSPYAPGSVPNMLDSAVLKTVGGLTLNYFNVLPTLLPDLAPRFSPVMEGVFNLLLAYAALLSGFLVDGRQAADPASVNSDSPGGINFFFPFAAAGLALTNTAFLPYLILRPLHKVDKP-VMQEEVPEIELKLGESKPLLSVYGVAGLYSIWWAFFGRPEFGGLTERWASFTDLVSSDRLMFAFSVEAVLYWIFQGWLVDDDMRRR------AAVSEGVVPWIAKTVPFLGLFVYMLWRPPLLSQQ----SEEPGR 376
BLAST of NO03G01320 vs. NCBI_GenBank
Match: EWM29660.1 (hypothetical protein Naga_100112g16 [Nannochloropsis gaditana]) HSP 1 Score: 154.5 bits (389), Expect = 6.200e-34 Identity = 101/226 (44.69%), Postives = 134/226 (59.29%), Query Frame = 0 Query: 134 IAPKFSPV----MEGVFNLLLAYAALLSGFLVDGRKAG----------SRSSNVNFFLPFAAAGLALTNTAFLPYLVLRPLHKK--DETCVRKEDVPQVELQLGEAKKLLAVYGLAGLYSVWWGFFARPEFGG--LSARWASLIEMASTDRLMFAFCVEAVLFWVFQGWLVDDDMMRRTGAKKSGSLGEILVPSVAKVVPFVGLFMYMMWRPPLMDRGE-GKIEEE 341 +AP+ SPV +EG+FNLLLA+AAL SGF+VDG+ AG R N FLP+ LTN +LPYLVLR K DE + + E LGE+K V+ GL S+ W AR E G LS RW S +++ +TDRL F+F V+ + FWVFQGWL+DDD+ RR G +G+I + S+ K +PF+GL Y+M RPPL+ GE G ++EE Sbjct: 327 LAPQSSPVLHPCLEGLFNLLLAWAALFSGFMVDGKVAGESTQARKTGEGRGGAKNAFLPYVLGMQLLTNAVYLPYLVLRKNVWKPADEPAGEGYTLTKAE-ALGESKIPPLVFIGVGLLSLAWAGLARGEVYGVELSERWRSFVQILTTDRLTFSFAVDLLYFWVFQGWLLDDDIERR-----GGEVGKISL-SLFKAIPFLGLGAYLMTRPPLLLGGERGSVKEE 545
BLAST of NO03G01320 vs. NCBI_GenBank
Match: XP_005779426.1 (hypothetical protein EMIHUDRAFT_73427 [Emiliania huxleyi CCMP1516] >EOD26997.1 hypothetical protein EMIHUDRAFT_73427 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 140.2 bits (352), Expect = 1.200e-29 Identity = 89/212 (41.98%), Postives = 117/212 (55.19%), Query Frame = 0 Query: 125 LITLISFVGIAPKFSPVMEGVFNLLLAYAALLSGFLVDGRKAGSRSSNVNFFLPFAAAGLALTNTAFLPYLVLRPLHKKDETCVRKEDVPQVELQLGEAKKLLAVYGLAGLYSVWWGFFARPEFGGLSARWASLIEMASTDRLMFAFCVEAVLFWVFQGWLVDDDMMRR--TGAKKSGSLGEILVPSVAKVVPFVGLFMYMMWRPPLMDRGE 335 L+ I + +P P +E +FNLLLA+AA +GFL DGR S V P A LTN LPYLV+R + V +++ E + E + L + G S+ WG ARPEFG L+ RWASLI++ S DRL +F V+ VLF +FQGWLVDDD+ RR T +S +L +VAK VPF G+ Y+ RP L R E Sbjct: 201 LVAPILHLPFSPALHPGLEAIFNLLLAWAAAFAGFLSDGRPGRPSGSMV----PVVAGMQFLTNAFLLPYLVVRA--PESNAPVYYDELEPKEALVSEWRGLGPLLATVGTGSLVWGLVARPEFGELATRWASLIDLLSADRLASSFVVDLVLFALFQGWLVDDDLRRRGVTDTSESATLS-----AVAKFVPFYGMCAYLALRPALPTRPE 401
BLAST of NO03G01320 vs. NCBI_GenBank
Match: EJK46109.1 (hypothetical protein THAOC_35242 [Thalassiosira oceanica]) HSP 1 Score: 138.7 bits (348), Expect = 3.500e-29 Identity = 87/209 (41.63%), Postives = 119/209 (56.94%), Query Frame = 0 Query: 125 LITLISFVGIAPKFSPVMEGVFNLLLAYAALLSGFLVDGRKAGSRSSNVNFFLPFAAAGLALTNTAFLPYLVLRPLHKKDETCVRKEDVP-QVELQLGEAKKLLAVYGLAGLYSVWWGFFARPEFGGLSARWASLIEMASTDRLMFAFCVEAVLFWVFQGWLVDDDMMRRTGAKKSGSLGEILVPSVAKVVPFVGLFMYMMWRPPLMDR 333 L++ I + AP P +EGVFNLLL++AAL +GFL D RK N+ F P LT+ LPYL LR +E V +ED+ +++ ++ E + L + G G S+WW F RPEFG LS R+AS +++ S DR+ +F V+ V+F VFQ W VDDD+ RR K L+ + AK VPF GL Y+ RPPL R Sbjct: 405 LVSPILQLPFAPTVHPCLEGVFNLLLSWAALFAGFLSDERK---DKPNLLPFGPMLVGMQFLTSGFLLPYLFLRTPETSEE--VYREDIDGELQAKVAEWRPLGPMLGSVGSLSIWWFLFGRPEFGELSERYASFMDLLSIDRVGSSFLVDLVIFAVFQSWFVDDDLQRRGIGKDELP----LLRNTAKYVPFFGLASYLTVRPPLASR 604
BLAST of NO03G01320 vs. NCBI_GenBank
Match: WP_096552540.1 (hypothetical protein [Nostoc sp. NIES-4103] >BAZ48292.1 conserved hypothetical membrane protein [Nostoc sp. NIES-4103]) HSP 1 Score: 136.3 bits (342), Expect = 1.700e-28 Identity = 79/206 (38.35%), Postives = 122/206 (59.22%), Query Frame = 0 Query: 125 LITLISFVGIAPKFSPVMEGVFNLLLAYAALLSGFLVDGRKAGSRSSNVNF-FLPFAAAGLALTNTAFLPYLVLRPLHKKDETCVRKEDVPQVELQLGEAKKLLAVYGLAGLYSVWWGFFARPEFGGLSARWASLIEMASTDRLMFAFCVEAVLFWVFQGWLVDDDMMRRTGAKKSGSLGEILVPSVAKVVPFVGLFMYMMWRPPL 330 L+ I +AP +P +EG+FN+++ +A L GF++DGR N F +PF LTN FLP+L LR + + T + + VE ++ E++ L A G+ + S+ WG FARPE+G L+ R+++L+E+ STDRL ++F ++ +FW+FQ WLV DDM RR + V V ++VPF+GL +Y+ RPPL Sbjct: 71 LVLPIVSPNVAPVLNPALEGLFNIVVTWAILFWGFVIDGR-------NQRFPIIPFLIGTALLTNVFFLPWLALRQPNPQPPT----DSLTFVE-KIAESRILPAFLGMIFVVSLVWGAFARPEYGDLTTRFSALLELLSTDRLAYSFLIDFFVFWLFQSWLVKDDMARRNWCNPT-------VLWVVRLVPFLGLVVYLWRRPPL 257
BLAST of NO03G01320 vs. NCBI_GenBank
Match: XP_002178221.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49886.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 134.8 bits (338), Expect = 5.100e-28 Identity = 81/206 (39.32%), Postives = 118/206 (57.28%), Query Frame = 0 Query: 125 LITLISFVGIAPKFSPVMEGVFNLLLAYAALLSGFLVDGRKAGSRSSNVNFFLPFAAAGLALTNTAFLPYLVLRPLHKKDETCVRKEDVPQVELQLGEAKKLLAVYGLAGLYSVWWGFFAR-PEFGGLSARWASLIEMASTDRLMFAFCVEAVLFWVFQGWLVDDDMMRRTGAKKSGSLGEILVPSVAKVVPFVGLFMYMMWRPPL 330 L++ + + +P P++EGVFNLLL++AA+ +GFL D R+ NV LP LT+ +PYLVLR ++ T V K+ +P+V QL EA+ L G S+ WG R +FG LS RW+S I++ S DR+ +F V+ LFW+FQ +L+DDD+ RR ++ L L K VPF G+ +Y+ RPPL Sbjct: 422 LVSPLLQLSFSPTVHPMLEGVFNLLLSWAAMFAGFLSDDRR---EKPNVAPMLPIVIGMQFLTSAFLMPYLVLR--STEESTLVAKDALPKV-AQLAEARALAPFLASVGTGSIVWGLVGRMADFGDLSTRWSSFIDLLSIDRVGSSFVVDLALFWLFQSFLIDDDLKRRGIDPETSELPVFL----GKYVPFFGMALYLAMRPPL 617
BLAST of NO03G01320 vs. NCBI_GenBank
Match: WP_038079474.1 (hypothetical protein [Tolypothrix bouteillei] >KIE12337.1 hypothetical protein DA73_0212400 [Tolypothrix bouteillei VB521301]) HSP 1 Score: 129.4 bits (324), Expect = 2.100e-26 Identity = 75/196 (38.27%), Postives = 112/196 (57.14%), Query Frame = 0 Query: 135 APKFSPVMEGVFNLLLAYAALLSGFLVDGRKAGSRSSNVNF-FLPFAAAGLALTNTAFLPYLVLRPLHKKDETCVRKEDVPQVELQLGEAKKLLAVYGLAGLYSVWWGFFARPEFGGLSARWASLIEMASTDRLMFAFCVEAVLFWVFQGWLVDDDMMRRTGAKKSGSLGEILVPSVAKVVPFVGLFMYMMWRPPL 330 AP +P +EG+FN+++ + L GFLVDGR N F LPF LTN +LP+L +R + T K+ + +E ++ E++ V + S+ W ARPEFG L+ARW SLI++ STDRL ++F ++ V+FW+FQ WLV DDM RR + + + + VPFVGL ++++ RP L Sbjct: 80 APVINPALEGLFNIVITWGLLFWGFLVDGR-------NQRFPMLPFLIGTALLTNVFYLPWLAIR----QPNTQPPKDSLNTLE-KIAESRAFPLVLTGVVVASLAWAMLARPEFGNLTARWTSLIKILSTDRLAYSFLIDFVVFWIFQSWLVPDDMARRHWQDPT-------ILWIVRFVPFVGLVVFLLRRPSL 256
BLAST of NO03G01320 vs. NCBI_GenBank
Match: WP_106881750.1 (hypothetical protein [filamentous cyanobacterium CCP5] >PSN18284.1 hypothetical protein C7271_13345 [filamentous cyanobacterium CCP5]) HSP 1 Score: 126.3 bits (316), Expect = 1.800e-25 Identity = 79/196 (40.31%), Postives = 113/196 (57.65%), Query Frame = 0 Query: 135 APKFSPVMEGVFNLLLAYAALLSGFLVDGRKAGSRSSNVNFFLPFAAAGLALTNTAFLPYLVLRPLHKKDETCVRKEDVPQVELQLGEAKKL-LAVYGLAGLYSVWWGFFARPEFGGLSARWASLIEMASTDRLMFAFCVEAVLFWVFQGWLVDDDMMRRTGAKKSGSLGEILVPSVAKVVPFVGLFMYMMWRPPL 330 AP +PV+EG+FNL++A+A L GF +DGR G R + FL A LTN +LP+L LR H R +P+ +LGE++ L L + G+ + S +W ARPEFG RW + ++ S DRL ++F + +LFWVFQGWLV DDM RR + + A++VP VGL +Y++WRP + Sbjct: 76 APVINPVLEGLFNLVIAWALLFWGFWLDGR--GQRWP-IGIFLVGTA---FLTNVFYLPWLALR--HPHSIPPGRPLGIPE---RLGESRLLPLVLLGIV-ILSGFWAVAARPEFGAWGQRWEAFTDLLSRDRLAYSFICDGLLFWVFQGWLVPDDMARRQWHRPTALW-------TARLVPLVGLAVYLLWRPSI 252
BLAST of NO03G01320 vs. NCBI_GenBank
Match: WP_009556752.1 (hypothetical protein [Oscillatoriales cyanobacterium JSC-12] >EKQ69844.1 hypothetical protein OsccyDRAFT_2489 [Oscillatoriales cyanobacterium JSC-12]) HSP 1 Score: 122.9 bits (307), Expect = 2.000e-24 Identity = 71/199 (35.68%), Postives = 108/199 (54.27%), Query Frame = 0 Query: 129 ISFVGIAPKFSPVMEGVFNLLLAYAALLSGFLVDGRKAGSRSSNVNFFLPFAAAGLALTNTAFLPYLVLRPLHKKDETCVRKEDVPQVELQLGEAKKLLAVYGLAGLYSVWWGFFARPEFGGLSARWASLIEMASTDRLMFAFCVEAVLFWVFQGWLVDDDMMRRTGAKKSGSLGEILVPSVAKVVPFVGLFMYMMWRP 328 + F +AP +P +EG+FN+++A+ L GFL+DGR +PF LTN +LP+L LR + T + ++E + E++ + L S+ W FARPEF S RW SL+ + + DRL ++F + +FWVFQ WLV DDM RR G ++ +A++VPF GL +Y++WRP Sbjct: 72 VLFPNLAPVLNPALEGLFNIVVAWGLLFWGFLLDGRNQRVP------MIPFLLGTALLTNVFYLPWLGLRQPNPAPATTA----LTRLE-RFAESRMIPIALSLVFGASLAWAAFARPEFSTWSNRWNSLLTLITGDRLAYSFWFDLWVFWVFQAWLVPDDMQRRNGHNS-------ILIWIARLVPFFGLVIYLLWRP 252
BLAST of NO03G01320 vs. NCBI_GenBank
Match: WP_068513377.1 (hypothetical protein [Leptolyngbya sp. O-77] >BAU43977.1 hypothetical protein O77CONTIG1_03810 [Leptolyngbya sp. O-77]) HSP 1 Score: 120.6 bits (301), Expect = 9.900e-24 Identity = 75/198 (37.88%), Postives = 104/198 (52.53%), Query Frame = 0 Query: 131 FVGIAPKFSPVMEGVFNLLLAYAALLSGFLVDGRKAGSRSSNVNFFLPFAAAGLALTNTAFLPYLVLRPLHKKDETCVRKEDVPQVELQ-LGEAKKLLAVYGLAGLYSVWWGFFARPEFGGLSARWASLIEMASTDRLMFAFCVEAVLFWVFQGWLVDDDMMRRTGAKKSGSLGEILVPSVAKVVPFVGLFMYMMWRP 328 F AP P +E +FNL + + L GF DGR G R LPF LTN +LP+L LR + + +P L+ + E++ V G L SV W ARP+FG RW SL+E+ DRL ++F ++ ++FWVFQGWLV DDM RR + + +A++VPFVGL +YM+ RP Sbjct: 82 FPSTAPVLHPGLEALFNLTVGWGLLFWGFATDGR--GQRLP----MLPFLLGTAFLTNVFYLPWLALRRPNPEPPI------LPLNRLERITESRAWPLVLGAIALASVIWAIAARPDFGDGPTRWVSLVEILQGDRLAYSFLIDLLVFWVFQGWLVSDDMARRQWVNPA-------IGWIARLVPFVGLVVYMVRRP 260 The following BLAST results are available for this feature:
BLAST of NO03G01320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G01320 ID=NO03G01320|Name=NO03G01320|organism=Nannochloropsis oceanica|type=gene|length=1158bpback to top protein sequence of NO03G01320.1 >NO03G01320.1-protein ID=NO03G01320.1-protein|Name=NO03G01320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=345bpback to top Synonyms
Publications
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