NO03G00940, NO03G00940 (gene) Nannochloropsis oceanica

Overview
NameNO03G00940
Unique NameNO03G00940
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1305
Alignment locationchr3:307039..308343 -

Link to JBrowse

Properties
Property NameValue
DescriptionS-adenosyl-L-methionine-dependent methyltransferase-like protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:307039..308343 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR024160BIN3_SAM-bd_dom
IPR010675Bin3
Vocabulary: Biological Process
TermDefinition
GO:0032259methylation
Homology
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: EWM29593.1 (S-adenosyl-L-methionine-dependent methyltransferase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 290.0 bits (741), Expect = 1.200e-74
Identity = 176/409 (43.03%), Postives = 224/409 (54.77%), Query Frame = 0 
Query:   56 FRPRILALRNVS----------KNDGKVLIKLRPPLTCPVPSPPSFSSKL---------WQRHAHGSYRSYYGARRQASSTDIASAAAIIPSTIHLPPASRSNPPTDARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKLAWASRREGGRNDIEKWVEFRCQDFV--------------------------GRRMLKRRRWKG-DGQECIGGAAAEEDGGVDWKDV--RIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRPPFKDVLMNEVGFESVEDLGIPLNAPVGYRRPMYCFVKR 417
            FRPR+LAL+N S          K D ++ +   P  +C + S  S SS L         WQRHAHGSYR+YYGARR+           +  ST      +R+    DARL LL PEWF  KD LD+GTNTGKVAWEI   ++PR +VGVDID ELIRVA+EKLAWA  R+G  +D  K++ F CQDF                           G   + R  W+G + ++  GG  A    G+   D   R KG +  G                                      + K+D+I+C SVTKH+HLQGGD+AL RL  R++  LRPGGR ILEPQAWRTYRKR++AS ESR+N+ LLRLRPPF   L+  +GF+SVE+LGIP  AP G++R M+CFVK+
Sbjct:   39 FRPRVLALQNRSAESGPCRSFLKRDDRIRMGHLPSPSCTLHSTDSPSSSLLRSLSSSFRWQRHAHGSYRAYYGARRR----------PVAASTFSTSSDTRAG-NKDARLELLSPEWFVHKDCLDVGTNTGKVAWEIYESYRPRCMVGVDIDEELIRVAREKLAWAKARDGKEHD--KYISFLCQDFAQDTLEEEETEDRRMEGSESEHGITNGGTERVPRMIWEGREKRKKAGGETAYLSDGMKQSDEIHRDKGVELSGMK-----------WTVQKDGLGVKKIEGLERGEGRGKASRKFDVITCLSVTKHVHLQGGDSALLRLFRRMYEALRPGGRLILEPQAWRTYRKRKNASKESRENFPLLRLRPPFTQDLLETIGFQSVEELGIPPRAPEGFKRAMFCFVKK 423
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: XP_016386706.1 (PREDICTED: 7SK snRNA methylphosphate capping enzyme-like [Sinocyclocheilus rhinocerous])

HSP 1 Score: 142.5 bits (358), Expect = 3.100e-30
Identity = 107/374 (28.61%), Postives = 147/374 (39.30%), Query Frame = 0 
Query:  101 HGSYRSYYGARRQASSTDIASAAAIIPSTIHLPPASRSNPPTDARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKL-----------------------------------------------AWASRREGGRNDIEKWVEF-RCQDFVGRRMLKRRRWKGDGQECIGGAA--AEEDGGVDWKD--------VRIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLMNEVGFESVEDLGIPLNAPVGYRRPMYCFVK 416
            +G+Y  YYG R    S                          D R+ ++ PEWF GK+ LD+G NTG +   I   ++P R+VG+DID  LI  A++ +                                               +  ++ EGG N  +   E   C    G  + +  R     +   GG +   E++  V   D        +RI      G                                       E+YD+I C SVTK +HL  GDA L+RL HRV+  LRPGGRFILEPQ W +Y KR+  +    KNY  +RL+P  F   L  EVGF S E +G  LN   G++RP+Y F K
Sbjct:  392 YGNYNKYYGYRNPGLS-------------------------EDPRIRVMNPEWFRGKEVLDLGCNTGHLTLSIAKNWRPSRIVGLDIDAALIHAARQNIRHYLSEVHTQQARRSXXXXXXXXXXXXXXXXXXLVEEKSQRKEKDEESLVAKEEGGENKTKHVDEANECMVEEGMEVGREERENKTTEAEWGGMSGKVEDEASVGLPDGKRSFPVSLRISRGPIAGPPLPEIHTDSLPPGDFPANVTFVKGNYVLESDMLLQTQREEYDVILCLSVTKWVHLNWGDAGLKRLFHRVYKHLRPGGRFILEPQPWNSYGKRKKLTETIFKNYYSIRLKPDQFSSYLTTEVGFSSYELIGTSLNYSRGFQRPIYLFHK 740
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: XP_016094526.1 (PREDICTED: 7SK snRNA methylphosphate capping enzyme-like [Sinocyclocheilus grahami])

HSP 1 Score: 142.1 bits (357), Expect = 4.000e-30
Identity = 108/378 (28.57%), Postives = 148/378 (39.15%), Query Frame = 0 
Query:   97 QRHAHGSYRSYYGARRQASSTDIASAAAIIPSTIHLPPASRSNPPTDARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKL-----------------------------------------------AWASRREGGRNDIEKWVEF-RCQDFVGRRMLKRRRWKGDGQECIGGAA--AEEDGGVDWKD--------VRIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLMNEVGFESVEDLGIPLNAPVGYRRPMYCFVK 416
            Q+  +G+Y  YYG R    S                          D R  ++ PEWF GK+ LD+G NTG +   I   ++P RVVG+DID  LI  A++ +                                               +  ++ EGG +  +   E   C    G  + +  R     +   GG +   E++  V   D        +RI      G                                       E+YD+I C SVTK +HL  GDA L+RL HRV+  LRPGGRFILEPQ W +Y KR+  +    KNY  +RL+P  F   L  EVGF S E +G  LN   G++RP+Y F K
Sbjct:  382 QKFQYGNYNKYYGYRNPGLS-------------------------EDPRFRVMNPEWFRGKEVLDLGCNTGHLTLSIAKNWRPSRVVGLDIDAALIHAARQNIRHYLSEVHTQQARCSGENGXXXXXXXXXXXXXDLVEEKSQRKEKDEESLVAKEEGGEDKTKHVDEVNECMVEEGMEVGREERENETTEAEWGGMSGNGEDEASVGLPDGKRSFPVSLRISRGPIAGPPLPEIHTDSLPPGDFPANVTFVKGNYVLESDMLLQTQREEYDVILCLSVTKWVHLNWGDAGLKRLFHRVYKHLRPGGRFILEPQPWNSYGKRKKLTETVFKNYYSIRLKPDQFSSYLTTEVGFSSYELIGTSLNYSRGFQRPIYLFHK 734
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: A3KQ55.2 (RecName: Full=7SK snRNA methylphosphate capping enzyme; Short=MePCE; AltName: Full=Bicoid-interacting protein 3 homolog; Short=Bin3 homolog; Short=zBCDIN3)

HSP 1 Score: 140.2 bits (352), Expect = 1.500e-29
Identity = 94/328 (28.66%), Postives = 136/328 (41.46%), Query Frame = 0 
Query:   97 QRHAHGSYRSYYGARRQASSTDIASAAAIIPSTIHLPPASRSNPPTDARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKLAWASRREGGRNDIEKWVEFRCQDFVGRRMLKRRRWKGDGQECIGGAAAEEDGGVDWK-------DVRIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLMNEVGFESVEDLGIPLNAPVGYRRPMYCFVKR 417
            ++  +G+Y  YYG R    S                          D R+ ++ P+WF GKD LD+G NTG +   I   ++P  +VG+DID  LI  A++ +                     + ++    ++  R  G+  +   G  + E+   D          +RI      G                                       E+YD+I C SVTK +HL  GDA L+R  HRV+  LRPGG FILEPQ W +Y KR+  +    KNY  +RL+P  F   L  EVGF S E +G   N   G++RP+  + KR
Sbjct:  359 KKFQYGNYNKYYGYRNPGMS-------------------------EDPRIRVMNPDWFRGKDVLDLGCNTGHLTLFIAKNWRPASIVGLDIDGSLIHAARQNI---------------------RHYLSEVQVQHSRRSGENTKADRGEVSGEEKDKDKTSKHSFPVSLRISRGPIAGPPLPETNTHSLPPGDFPANVTFIKGNYVLESDVLLQTQREEYDVILCLSVTKWVHLNWGDAGLKRFFHRVYKHLRPGGLFILEPQPWSSYNKRKKLTEAICKNYHSIRLKPDQFSSFLTTEVGFSSYELIGTSQNYSKGFQRPISLYHKR 640
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: XP_016360914.1 (PREDICTED: 7SK snRNA methylphosphate capping enzyme-like [Sinocyclocheilus anshuiensis])

HSP 1 Score: 139.4 bits (350), Expect = 2.600e-29
Identity = 106/375 (28.27%), Postives = 147/375 (39.20%), Query Frame = 0 
Query:   97 QRHAHGSYRSYYGARRQASSTDIASAAAIIPSTIHLPPASRSNPPTDARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKL--------------------------------------------AWASRREGGRNDIEKWVEF-RCQDFVGRRMLKRRRWKGDGQECIGGAA--AEEDGGVDWKD--------VRIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLMNEVGFESVEDLGIPLNAPVGYRRPMYCFVK 416
            Q+  +G+Y  YYG R    S                          D R+ ++ PEWF GK+ LD+G NTG +   I   ++P R+VG+DID  LI  A++ +                                            +  ++ EGG +  +   E   C    G  + +  R     +   GG +   E+D  V   D        +RI      G                                       E+YD+I C SVTK +HL  GDA L+RL HRV+  LRPGG FILEPQ W +Y KR+  +    KNY  +RL+P  F   L  EVGF S E +G   N   G++RP+Y F K
Sbjct:  388 QKFQYGNYNKYYGYRNPGLS-------------------------EDPRIHVMNPEWFRGKEVLDLGCNTGHLTLSIAKNWRPARIVGLDIDAALIHAARQNIRHYLSEVHTQQARRAEENGEGNRGEGKEGDLVEEKSQRKEKDEESLVAKEEGGEDKTKHVDEVNECMVEEGMEVGREERENKTTEAEWGGMSGKVEDDASVGLLDGKRSFPVSLRISRGPIAGPPLPEIHTDSLPPGDFPANVTFVKGNYVLESDMLLQTQREEYDVILCLSVTKWVHLNWGDAGLKRLFHRVYKHLRPGGLFILEPQPWNSYGKRKKLTETVFKNYYSIRLKPDQFSSYLTTEVGFSSYELIGTSPNYSRGFQRPIYLFHK 737
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: XP_007239698.2 (7SK snRNA methylphosphate capping enzyme-like [Astyanax mexicanus] >XP_007239699.2 7SK snRNA methylphosphate capping enzyme-like [Astyanax mexicanus])

HSP 1 Score: 138.7 bits (348), Expect = 4.400e-29
Identity = 94/328 (28.66%), Postives = 144/328 (43.90%), Query Frame = 0 
Query:  143 DARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKLAW-------ASRREGGRND------------IEKWVEFRCQDFVGRRMLKR-----------------------------------RRWKGDGQECIGGAAAEEDGGVDWKDVRIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLMNEVGFESVEDLGIPLNAPVGYRRPMYCFVK 416
            D RL  L+PEWF GK+ LD+G NTG++   I + ++P R+VG+DID  LI  A++ + +          R G +++            +EK   ++ +  V   + K                                    ++ KG+ +E +  ++A    G     V ++  +    +                                     E++D+I C SVTK +HL  GD  L+RL HRV+  LRPGG FILEPQ W +Y KR+  +    KNY  + L+P  F   L++EVGF S E +G P N   G++RP+Y F K
Sbjct:  456 DPRLRTLKPEWFRGKEVLDLGCNTGRLTLSIAMNWRPSRIVGLDIDGSLIHAARKNILYFLSEMHVMKSRSGEKDESGDKAEKPETTSLEK--NYKSESPVDMEVDKEGQEXXXXXXXXXXXXXXXXXXXXXXXXXDGVDGDAKKTKGE-EEAVSASSASSSNGNCVFPVSLRISRGPIAAPPLPDTKPPSPGNFPANVSFVKGNYVLDSDLLLVTQREEFDVILCLSVTKWVHLNWGDVGLKRLFHRVYRHLRPGGTFILEPQPWNSYSKRKKLTETITKNYYSICLKPEQFSTYLISEVGFSSYELIGTPSNLSRGFQRPIYLFHK 780
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: NP_001122001.1 (7SK snRNA methylphosphate capping enzyme [Danio rerio] >XP_021331887.1 7SK snRNA methylphosphate capping enzyme isoform X1 [Danio rerio])

HSP 1 Score: 137.9 bits (346), Expect = 7.500e-29
Identity = 105/356 (29.49%), Postives = 149/356 (41.85%), Query Frame = 0 
Query:   97 QRHAHGSYRSYYGARRQASSTDIASAAAIIPSTIHLPPASRSNPPTDARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKL--------AWASRREG-----GRNDI---------------EKWVEF-----RCQDFVGRRMLKRRRWKGDGQECIGGAAAE-EDGGVDWK-DVRIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLMNEVGFESVEDLGIPLNAPVGYRRPMYCFVKR 417
            ++  +G+Y  YYG R    S                          D R+ ++ P+WF GKD LD+G NTG +   I   ++P  +VG+DID  LI  A++ +           SRR G      R ++               EK  +      +C D  G  + +  + + D  E   GA+ +  DG   +   +RI      G                                       E+YD+I C SVTK +HL  GDA L+R  HRV+  LRPGG FILEPQ W +Y KR+  +    KNY  +RL+P  F   L  EVGF S E +G   N   G++RP+  + KR
Sbjct:  367 KKFQYGNYNKYYGYRNPGMS-------------------------EDPRIRVMNPDWFRGKDVLDLGCNTGHLTLFIAKNWRPASIVGLDIDGSLIHAARQNIRHYLSEVQVQHSRRSGENTKADRGEVSGEEKDKDKTSLVMDEKKAKHVDEVNKCMD-EGMEVNQEEKREADRGEIGDGASVDLPDGKHSFPVSLRISRGPIAGPPLPETNTHSLPPGDFPANVTFIKGNYVLESDVLLQTQREEYDVILCLSVTKWVHLNWGDAGLKRFFHRVYKHLRPGGLFILEPQPWSSYNKRKKLTEAICKNYHSIRLKPDQFSSFLTTEVGFSSYELIGTSQNYSKGFQRPISLYHKR 696
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: XP_023374388.1 (7SK snRNA methylphosphate capping enzyme isoform X1 [Otolemur garnettii])

HSP 1 Score: 136.7 bits (343), Expect = 1.700e-28
Identity = 87/279 (31.18%), Postives = 128/279 (45.88%), Query Frame = 0 
Query:  143 DARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKLAWASRREGGRNDIEKWVEFRCQDFVGRRML--KRRRWKGDGQECIGGAAAEEDGGVDWKDVRIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLM-NEVGFESVEDLGIPLNAPVGYRRPMYCFVKRR 418
            D RL +L+PEWF G+D LD+G N G +   I   + P R+VG+DID  LI  A++ +         R+ + + +    Q   G R    + R      + C   +     G +    V + G     TS                                    T +YD++ C S+TK +HL  GD  L+R+  R++  LRPGG  +LEPQ W +Y KR+  +    KNY  ++L+P  F   LM +EVGF S E +  P N   G++RP+Y F K R
Sbjct:  418 DVRLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDARLIHSARQNI---------RHYLSEELRLPSQTSEGDRGAEGEERTTTVRKRSCFPASLTASRGPIAAPQVPLDG---ADTSVFPNNVVFVTVRRSRGSWNWDQGNYVLDRDELVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYAKRKSLTETIYKNYYRIKLKPEQFSSYLMSSEVGFSSYELVATPHNTSKGFQRPVYVFHKAR 684
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: XP_009836922.1 (hypothetical protein H257_11620 [Aphanomyces astaci] >ETV73496.1 hypothetical protein H257_11620 [Aphanomyces astaci])

HSP 1 Score: 136.3 bits (342), Expect = 2.200e-28
Identity = 89/280 (31.79%), Postives = 132/280 (47.14%), Query Frame = 0 
Query:  143 DARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVA----KEKLAWASRREGGRNDIEKWVEFRCQDFVGRRMLKRRRWKGDGQECIGGAAAEEDGGV--DWKDVRIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLMNEVGFESVEDLGIPLNAPVGYRRPMYCFVK 416
            D+RLS+ + EWF GK  LDIG N+G +  EI   F P  ++G+D DP+LI  A    KE ++  +  E  R D++K                    +G   +       ++DG    D   +  + WK      S                                   ++YD+I+C SVTK IHL  GD  L+++ H V+A L PGGRF+LEPQ W++Y  R+H +  ++ NY  + LRP  F   L + VGF SVE L +   +  G++RP+Y + K
Sbjct:   60 DSRLSVFKKEWFEGKKALDIGCNSGDMTLEIARRFSPAFIMGIDADPDLITQARASLKEYISKLAVTEAFR-DVQK--------------------EGHSDK------PQDDGNTEDDELPLSFRLWKPATHHVSSADPLPNIGSFASGVCFPYNVVFKRENIVDDTHTGKEYDVITCLSVTKWIHLFHGDDGLKQVFHLVYALLMPGGRFVLEPQKWKSYFNRKHTNATTQANYDRIALRPKDFAQYLCHTVGFSSVELLKVCSTSTHGFKRPIYLYTK 312
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: CDQ88746.1 (unnamed protein product [Oncorhynchus mykiss])

HSP 1 Score: 136.3 bits (342), Expect = 2.200e-28
Identity = 98/319 (30.72%), Postives = 138/319 (43.26%), Query Frame = 0 
Query:  101 HGSYRSYYGARRQASSTDIASAAAIIPSTIHLPPASRSNPPTDARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKLAWASRREGGRNDIEKWVEFRCQDFVGRRMLKRRRWKGDGQECIGGAAAEEDGGVDWKDVRIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTE--KYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRPP-FKDVLMNEVGFESVEDLGIPLNAPVGYR-RPMYCFVK 416
            +G+Y  YYG R    +                          D R   L+PEWF GK  LD+G NTG +   I    +P R++G+DID  L+  A++ +         R+ +    E + Q+       ++ +  G G+E    A  +ED         +  W   G   +                                  T+  +YD+I CFSVTK +HL  GD  L+RL HRV   LRPGG F+LEPQ W TY KR+  +    KNY  +RL+P  F   L +EVGF S E +G P ++  G   RP+Y F K
Sbjct:  368 YGNYNKYYGYRNPGCA-------------------------EDPRFRCLRPEWFHGKAVLDLGCNTGHLTLCIAKKLRPARILGLDIDGGLVHAARQNI---------RHYLS---ELQAQEARRAAGDEKEKTNGPGEERKEKANRQEDDSFP-----VSLWISRGPIAAPPLPDTPTMPPGNFPSNVSFVKGNYVLESDALLLTQQPEYDVILCFSVTKWVHLNWGDGGLKRLFHRVFRHLRPGGLFVLEPQPWVTYGKRKKLTDSIFKNYHSIRLKPEHFSTYLTSEVGFSSYELIGTPNSSSRGMSLRPIYLFHK 644
The following BLAST results are available for this feature:
BLAST of NO03G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29593.11.200e-7443.03S-adenosyl-L-methionine-dependent methyltransferas... [more]
XP_016386706.13.100e-3028.61PREDICTED: 7SK snRNA methylphosphate capping enzym... [more]
XP_016094526.14.000e-3028.57PREDICTED: 7SK snRNA methylphosphate capping enzym... [more]
A3KQ55.21.500e-2928.66RecName: Full=7SK snRNA methylphosphate capping en... [more]
XP_016360914.12.600e-2928.27PREDICTED: 7SK snRNA methylphosphate capping enzym... [more]
XP_007239698.24.400e-2928.667SK snRNA methylphosphate capping enzyme-like [Ast... [more]
NP_001122001.17.500e-2929.497SK snRNA methylphosphate capping enzyme [Danio re... [more]
XP_023374388.11.700e-2831.187SK snRNA methylphosphate capping enzyme isoform X... [more]
XP_009836922.12.200e-2831.79hypothetical protein H257_11620 [Aphanomyces astac... [more]
CDQ88746.12.200e-2830.72unnamed protein product [Oncorhynchus mykiss][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL070nonsL070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005824NSK005824Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G00940.1NO03G00940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100006g26gene1099Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G00940.1NO03G00940.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G00940 ID=NO03G00940|Name=NO03G00940|organism=Nannochloropsis oceanica|type=gene|length=1305bp
ATGAAGCCCGAGCTTAATGCGCTGTCGTCAACCTCCTCCCCCCCTACCGA
GCCTCCTACCGAGCCTCCTACCGTCGAGGCAACCTCACTGTCCTCCACAG
CACAAGCACCTGCGCCAGATCAACAAGAAGCACCAACGAAAGAATTGCAA
TTTGTCTTTCCAGCCTTTCGACCGCGGATCTTGGCTCTAAGAAACGTTTC
CAAGAACGACGGCAAAGTCCTAATTAAGCTGCGTCCGCCCCTCACTTGTC
CCGTCCCTTCACCGCCATCTTTTTCCTCCAAGCTCTGGCAACGTCATGCC
CACGGATCCTATCGCTCCTACTATGGCGCACGTCGTCAAGCTTCCTCCAC
AGATATAGCGTCTGCTGCTGCCATCATCCCAAGCACCATCCATCTGCCTC
CAGCCTCCAGAAGCAATCCCCCAACAGACGCCCGTCTCTCCTTACTGCAA
CCCGAATGGTTTGCTGGTAAAGATTTCTTAGACATAGGAACTAACACGGG
GAAAGTTGCCTGGGAAATTTGTCTATATTTCAAGCCTAGACGGGTGGTGG
GTGTGGATATTGATCCGGAGCTCATAAGAGTTGCAAAGGAGAAGCTGGCG
TGGGCATCCCGGAGAGAGGGAGGGAGGAATGACATCGAAAAATGGGTGGA
GTTTCGGTGTCAGGATTTCGTGGGTAGGAGGATGTTGAAGAGAAGGAGAT
GGAAAGGGGATGGGCAGGAATGTATAGGGGGGGCTGCCGCAGAGGAAGAC
GGGGGTGTAGACTGGAAGGATGTCAGGATTAAAGGATGGAAGGAGTATGG
GACGAGTGAATCAAGAGAATTCGGAGAGGAGCGACAAAATACTGAGGAGG
TTAAGGCGGAGAAGAAGGAGGATGAGAAGGATGATGAGAATGAGGTGCAG
ATGGATGTGGAAGGGACGGAAAAATACGACATCATAAGCTGTTTCTCGGT
TACAAAACATATACATTTACAAGGCGGAGACGCCGCGCTCCGTCGACTCC
TCCATCGAGTCCACGCACGACTACGGCCAGGTGGCCGATTTATCCTCGAG
CCACAGGCATGGCGAACGTATCGAAAACGGAGGCATGCCTCGGTGGAATC
TCGGAAAAATTACACTCTGTTACGTCTTCGGCCGCCCTTCAAAGATGTAT
TGATGAACGAGGTTGGATTTGAGAGCGTAGAGGACCTGGGGATTCCACTC
AATGCACCAGTGGGGTATAGAAGGCCAATGTATTGTTTTGTCAAAAGGAG
AGAAGAAGCCGAAGAAAGTGTGGAGAGAGGTCAGAAGGGGTCGGTGGGGG
AGTAA
back to top

protein sequence of NO03G00940.1

>NO03G00940.1-protein ID=NO03G00940.1-protein|Name=NO03G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=435bp
MKPELNALSSTSSPPTEPPTEPPTVEATSLSSTAQAPAPDQQEAPTKELQ
FVFPAFRPRILALRNVSKNDGKVLIKLRPPLTCPVPSPPSFSSKLWQRHA
HGSYRSYYGARRQASSTDIASAAAIIPSTIHLPPASRSNPPTDARLSLLQ
PEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKLA
WASRREGGRNDIEKWVEFRCQDFVGRRMLKRRRWKGDGQECIGGAAAEED
GGVDWKDVRIKGWKEYGTSESREFGEERQNTEEVKAEKKEDEKDDENEVQ
MDVEGTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILE
PQAWRTYRKRRHASVESRKNYTLLRLRPPFKDVLMNEVGFESVEDLGIPL
NAPVGYRRPMYCFVKRREEAEESVERGQKGSVGE*
back to top
Synonyms
Publications