NO03G00830, NO03G00830 (gene) Nannochloropsis oceanica

Overview
NameNO03G00830
Unique NameNO03G00830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3410
Alignment locationchr3:277281..280690 +

Link to JBrowse

Properties
Property NameValue
DescriptionBestrophin-like protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:277281..280690 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021134Bestrophin/UPF0187
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO03G00830 vs. NCBI_GenBank
Match: EWM29617.1 (Bestrophin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 524.2 bits (1349), Expect = 4.500e-145
Identity = 275/399 (68.92%), Postives = 310/399 (77.69%), Query Frame = 0
Query:   51 LLLLLFLLPFCLSLHRAIPSAFLGPSHTCFVARHRSPCPTPPFHNFHVVTAATSLPTRRTHTRARGDATFLLDPPQRYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIALDRKYHARFSMLVISFSVTLRAHLQRVVVSTELEALLPSWEADQVRMNSCPPALIAMKLTHLINEAVGKNEQRSDFYALYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRRMTTTIARDVRSLLQTKDGMDFDTLLDEDLLSTEDRILAENAPQSTKVQS 450
            +L+   L+ FCL +  A   A + P H    +  R      P HN H   +           RA+   T LLDPPQRY+SSDW ENL+SL DSRI KRISGHL FNTAWA  VT ++E MPQWHI + ISP+PHQLMS+ALGLLLVFRTNAAYDRFWEARKVWGSVTN CRNLARTGRIALD++YHARFSML+I+F+VTLRAHLQR +VSTELE LLPSWEADQVRM++CPPAL+ MKLT+LINEAV  NE RSDFYALYLEQLVG+L+NCLGMAERILLTPVPASYSRHTSRFLSLYT TLPFVLVH+LE FT P +G +CW LFSIEEIGHLIEEPF A++KQLPL  MT TIARDV+ LL  K G D    LDE+LLS +D  LAEN PQS    S
Sbjct:   79 VLVAAHLVFFCL-VSCASSIALIFPFHAASSSFTRQHVMFRP-HNCHSNPSVNHFVNHIGCRRAKSHVTALLDPPQRYKSSDWAENLRSLFDSRIVKRISGHLLFNTAWATGVTGVYESMPQWHIGSDISPVPHQLMSTALGLLLVFRTNAAYDRFWEARKVWGSVTNICRNLARTGRIALDQRYHARFSMLIIAFAVTLRAHLQRNIVSTELETLLPSWEADQVRMDTCPPALVCMKLTYLINEAVSHNEARSDFYALYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFTAPVLGIVCWGLFSIEEIGHLIEEPFCASTKQLPLISMTETIARDVKHLLGLKAGFDVTFPLDENLLSPDDWKLAENGPQSALASS 475          
BLAST of NO03G00830 vs. NCBI_GenBank
Match: AFA52595.1 (hypothetical protein [Vaucheria litorea])

HSP 1 Score: 241.5 bits (615), Expect = 5.800e-60
Identity = 129/311 (41.48%), Postives = 192/311 (61.74%), Query Frame = 0
Query:  128 YQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAY-ISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIAL-DRKYHARFSMLVISFSVTLRAHLQRVVVSTELE---ALLPSWEADQVRMNSCPPALIAMKLTHLINEAV---GKNEQRSDFYALYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRRMTTTIARDVRSLLQTKDGMDFDTLLDEDLL 431
            + S+DW++N+++L  S+I K I+ HLWFNT WA  +T +  F PQ +ID + IS +P  LM+SAL LLL+FR NAAYDRFWE+RKVWG++TN  RNLAR G+I + D +  + +   + S+   L+ HLQ      EL+   A LP +E + ++ N  PP L+  +++ ++        K  Q   FY + +E+ +  L +C+G+ ERIL TPVP SYSRHTSR L+++  TLP VLV   E+ T   +  + W + SIE I +LIE+PF AT+ QLP+      + R+V  ++  K    +  L+D  +L
Sbjct:   58 FASNDWLDNIKNLPASKINKDITSHLWFNTGWAVLITCIHMFTPQHYIDDFHISTVPQTLMASALSLLLIFRNNAAYDRFWESRKVWGAITNTVRNLARLGKITIDDEEVLSLYKDYLRSYPFLLKQHLQNTRNDEELDWLKARLPKYEFENIQSNPNPPLLVLQRMSQILGTLFPPSSKPSQAKVFYRIKIEECINLLSDCVGLCERILNTPVPRSYSRHTSRLLTVFLLTLPIVLVPHTEFGTPLVVLLMGWGMLSIEGIAYLIEQPFDATNNQLPMINYCNNLFRNVDFIVSEK---SYGRLVDTSIL 365          
BLAST of NO03G00830 vs. NCBI_GenBank
Match: CEL96461.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 227.6 bits (579), Expect = 8.600e-56
Identity = 124/283 (43.82%), Postives = 169/283 (59.72%), Query Frame = 0
Query:  134 VENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIALDRKYHARFSMLVISFSVTLRAHLQRVVVS-TELEALLPSWEADQVRMNSCPPALIAMKLTHLINEA--VGKNEQRSDFYALYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRRMTTTIARDVRSLL 414
            +E L ++  SRI KRI G L   TAW+  +T LF   P+  + A  S LPH LMS A+GLLLVFRTNAAYDR+WE RK+WG V + CR LA      L   +  R + L+ SF   ++ HLQ   V   E+   +   +A+ +R    PP LI   ++   +EA  V ++ + ++   ++LE ++G L   LG  ERI+ TPVP SYSRHTSRFL+LY  TLP VLV  L++ T+P +  +CW   +IEEIGH IE+PF   S QLPL+    TI  D+   +
Sbjct:   58 LECLTTVPLSRILKRIRGFLLVTTAWSVFITTLFAVAPKLSLFALSSSLPHSLMSGAMGLLLVFRTNAAYDRYWEGRKLWGKVISTCRELATASLFYLPIPFQYRLANLIRSFPFLMKQHLQGGEVDMAEVSRWITPNDAEALRQVRNPPLLICKLMSGTCHEAMEVSRDTKPTERQLIWLENIIGHLSEALGGCERIMKTPVPLSYSRHTSRFLTLYCLTLPVVLVQSLQWMTIPVVTFMCWGFKAIEEIGHFIEDPFDKASFQLPLKGFCETIQADIEDTM 340          
BLAST of NO03G00830 vs. NCBI_GenBank
Match: CEM01971.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 221.9 bits (564), Expect = 4.700e-54
Identity = 133/355 (37.46%), Postives = 185/355 (52.11%), Query Frame = 0
Query:  122 LDPPQRYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEF---MPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIALDRKYHARFSMLVISFSVTLRAHLQRVVVSTELEALLPSWEADQVRMNSCPP----ALIAMKLTHLINEAVGKNEQR-----------------------------------SDFYALY------------LEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRRMTTTIARDVRSLLQTKDGMDFD 423
            L  P RY S DW+  L+SL  S I  RI  HL +NT WA  +  ++E+   +P + I      LPH +MSSA+ LLLVFRTNA+YDRFWEARK+WG++ N  R LA       + ++H RF  L+ +F  +L+ HLQ +   +ELE      E + +R    PP     +I ++L   + + +   ++R                                   +D  AL+            +EQ+VG L + LG  ERI  TP+P SYSRHTSRFL+++  TLP +LV +L   T   +  + W +FSIEEIGH IEEPF A +KQL L  M  TI RDV  +L      +F+
Sbjct:   76 LKKPVRYSSKDWIYALKSLPSSTIFTRIQSHLLWNTVWAALIAGIYEYDPNLPDFPI------LPHTIMSSAVALLLVFRTNASYDRFWEARKLWGTLVNKSRELAYNAATYTEPRHHERFGKLISAFCASLKQHLQSIDDISELERFFTEQEMETLRKVGSPPLYILRMINLELRLALQDPIELVQERQREGLPTQQTMMLMQPLGMEGTTAGRIKVDSPAVVTDHNALWKELWFNPGYRASMEQVVGTLCDVLGACERIAKTPIPKSYSRHTSRFLTVFMATLPLILVTKLGLLTPLVMFVVGWAMFSIEEIGHFIEEPFDAVNKQLTLADMCATIQRDVEDILLKPPLQEFE 424          
BLAST of NO03G00830 vs. NCBI_GenBank
Match: CEM06220.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 221.1 bits (562), Expect = 8.100e-54
Identity = 138/378 (36.51%), Postives = 185/378 (48.94%), Query Frame = 0
Query:   87 PCPTPPFHNFHVVTAATSLPTRRTHTRARGDATFLLDPPQRYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIALDRKYHARFSMLVISFSVTLRAHLQRVVVSTELEALLPSWEADQVRMNSCPPALIAMKLTHLIN-------------------------EAVGKNEQRSDF--------------------------YALYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRRMTTTIARDVRSLL 414
            P P  P +     T   + P            +  L  P RY S DW+  +QSL  S+I +RI  HL++NT WA  V AL+E+ P+         LPH +M+SAL LLLVFRTNA+YDRFWEARK+WG++ N  R +A         ++H RF  L  +F   L+ HLQ +   +E+E      E + ++    PP  I   L   +                          +AVG N + S                            Y + +E+ +G L + +G  ERI  TP+P SYSRHTSRFL+++  TLPFVLV +L   T  A+  + W LFSIEEIGH IEEPF   +KQL L  M  TI RDV  +L
Sbjct:   31 PSPLQPSNILRPHTRKVTRPFPGGEADVPATVSLALKKPVRYSSKDWLYAIQSLPRSKIFERIQSHLFWNTLWAAGVAALWEYYPEL---PEFPVLPHSIMASALALLLVFRTNASYDRFWEARKLWGTLVNKSREIAYCAATYTHPRHHKRFGNLTAAFCAALKQHLQGLDDISEIEKYFTPTEYEALKKVGSPPLAILRMLNLELRLALQGSLEPVGQTSPPPVGINVNAPQAVGVNNKESSVVEMFRQQSGQQSISLSVRPELFTNPSYRVQIEKCLGTLCDVMGACERIAKTPIPKSYSRHTSRFLTVFCTTLPFVLVTKLGLLTPLAMFVLQWGLFSIEEIGHFIEEPFDYYNKQLTLADMCATIQRDVEDIL 405          
BLAST of NO03G00830 vs. NCBI_GenBank
Match: CBN74931.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 211.5 bits (537), Expect = 6.400e-51
Identity = 114/276 (41.30%), Postives = 162/276 (58.70%), Query Frame = 0
Query:  129 QSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHI-DAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIAL--DRKYHARFSMLVISFSVTLRAHLQRVVVSTELE-ALLPSWEADQVRMNSCPPALIAMKLTHLINEAVGKN-----------EQRSDFYALYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPF 390
            + +DW  N+Q+L  SR+   I  HL++NTA+A  V+ +    PQ  I D ++SP+PH +MS ALGLLLVFRTNAAY+RFWEAR++WG + N CRN+AR   +AL  D          +  +   L+ HLQ      E++ + LP     +++ +  PP      +  ++  A  +            +  S  Y + +E+ +  L++ LG  ERI+ TPVP  YSRHTSRFL++Y FTLP VLV   E FT P + A+CW LFSIEEI + IE+PF
Sbjct:    5 KKNDWFANIQNLPKSRLLYNIKEHLFYNTAFAFCVSMVHYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARQIWGGLINQCRNIARLSTVALGPDSPEWLEMKEYLRLYPFLLKQHLQDERDDAEMDWSRLPEGTVARLQEDPNPPLYCCQIMMEILARACSEGGAAQSPGGRVPDYTSVMYRVQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPVVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPF 280          
BLAST of NO03G00830 vs. NCBI_GenBank
Match: OSX68971.1 (hypothetical protein BU14_2020s0001 [Porphyra umbilicalis])

HSP 1 Score: 194.1 bits (492), Expect = 1.100e-45
Identity = 129/343 (37.61%), Postives = 177/343 (51.60%), Query Frame = 0
Query:   86 SPCPTPPFHNFHVVTAATSLPTRRTHTRARGDATFLLDPPQRYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQ---WHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIALDRKYHARFSMLVISFSVTLRAHLQRVVVSTELEALLPSWEADQVRMNSCPPALIAMKLTHLINE--------------AVGKNEQRSDFYA--LYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRRMTTTIARDV 410
            +P P+PP           ++   +T TRA       +  P+RY S+DW  NL SL  S + +RIS H+ FNT  A  V  L ++ P    WH    +SPLPH L+ +ALGLLL +RT+AAYDRFWEARKV G + N  RN+ R    +L          L I+++     HLQ       +   L   +   V+  +  P  IAM L   + +               VG     ++  A    +E+LV  L++ LGM ERI+LTP+P +YSRHTSRFLSL+T +L  VLV     F V  +  I W LF +EE+GH+IE+P   T   LP   +  TI RD+
Sbjct:   71 APTPSPP-----------AVAPTKTVTRA------AIQRPERYSSADWWRNLVSLPQSVVLRRISSHVAFNTIVATLVVFLHQYTPDEKIWH----LSPLPHVLLGTALGLLLSYRTSAAYDRFWEARKVLGGMVNETRNIMRMAVTSLRPSSADAVCRLTIAWTFATMHHLQGTESEEGVTEYLTPEQMVTVKGVTNRPMAIAMLLATAVADGFTEKEEALVSARAGVGAGATTANLLAERQEMEKLVTLLVDYLGMCERIVLTPIPLNYSRHTSRFLSLWTASLTVVLVELQGPFLVLDMLFIAWALFGLEEVGHMIEDPLQLTKSSLPFINVCNTIRRDI 392          
BLAST of NO03G00830 vs. NCBI_GenBank
Match: KOO29552.1 (membrane protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 189.5 bits (480), Expect = 2.600e-44
Identity = 125/330 (37.88%), Postives = 174/330 (52.73%), Query Frame = 0
Query:   97 HVVTAATSLPTRRTHTRARGDATFLLDPPQRYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIALDRKYHARFSMLVISFSVTLRAHLQRVVVSTE-------LEALLPSWEADQVRMNSCPPALIAMKLTHL--INEAVGKNEQRSDFYALYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSAT---SK--QLPLRRMTTTIARDVRSL 413
            H+  +ATS+  R      +    +  +  QRY ++DW +N+++L  S + KRI+  L FN       T +    P + +   IS LPH L+ SALGLLLVFRTNAAYDRFWEARK W  VT  CRN A      +          L+  F V L+ +L+      +       + +LL   EA+ +   +  P  +  +L  L   ++  G  E+  +     + + V  L  C+   ERI  TP+P +YSRHTSRFL +YT +LP  LVH + + T+P +  I W LF I EIG+LIEEPFSA    SK   LPL  +  TI RDVR +
Sbjct:   23 HLAPSATSIAARAGCVSCKFSPAY--ETTQRYAAADWAKNIRTLPQSTVLKRIASPLIFNVV---VTTIICAINPIFTVPRLIS-LPHTLLGSALGLLLVFRTNAAYDRFWEARKRWDVVTAECRNFASLACTFMTAGQALPMLSLISVFPVVLKNYLRSSQSDADEMRDLRRVRSLLAPEEAEALAAVNNQPQYVLTRLRALGQGSKVAGVTEKEREL----MLKSVSVLGECVSACERIYNTPIPLAYSRHTSRFLVIYTSSLPLALVHSIGWITLPVVAMIVWALFGILEIGNLIEEPFSAVVDFSKLPLLPLTEVCRTIRRDVREI 342          
BLAST of NO03G00830 vs. NCBI_GenBank
Match: XP_005709103.1 (hypothetical protein Gasu_03530 [Galdieria sulphuraria] >EME32583.1 hypothetical protein Gasu_03530 [Galdieria sulphuraria])

HSP 1 Score: 183.3 bits (464), Expect = 1.900e-42
Identity = 111/303 (36.63%), Postives = 159/303 (52.48%), Query Frame = 0
Query:  126 QRYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIALDRK----YHARFSMLVISFSVTLRAHLQRVVVSTELEALL---PSWE----------ADQVRMNSCPPALIAMKLTHLINEAVGKNEQRSDFYA--LYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRRMTTTIARDV 410
            +RY SSDW   L SL  S I  RI  HL+    W   V+ L      +      +P+PH L+ SA+GLLLVFRTNAAYDRFWEARK+ G +    R + R      + +       R  ML+  F V    H+Q          ++   P +           AD++  +  PP  +  +L+  I  A  +    SD+      +E  +  L+  L   ERI+ TPVP  YSRHTSRFLSL+ FT P ++V   ++ TVP    +CW+LF+IEEIGH+IE+PF   +++LP++ M +++  DV
Sbjct:   52 ERYTSSDWSRCLLSLPKSIILSRIRSHLF----WTCCVSFLVSLFDHFFKVPPFNPIPHTLLGSAMGLLLVFRTNAAYDRFWEARKLVGVLAVQSREMTRCIHSYFNEEKFQVIKIRLVMLLKLFLVAFLQHVQGTADVVSFRKMIRSNPEYSDSSSHFVDIFADEIVHSPNPPLFVLFQLSMQIKAAFRETTNVSDWVVQRAKMEWQLSSLMEVLSGCERIITTPVPLGYSRHTSRFLSLWCFTFPLLVVSHFKFLTVPVTAFVCWSLFAIEEIGHVIEDPFLEGTQKLPIKSMISSLLADV 350          
BLAST of NO03G00830 vs. NCBI_GenBank
Match: CEL93106.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 182.6 bits (462), Expect = 3.200e-42
Identity = 116/307 (37.79%), Postives = 156/307 (50.81%), Query Frame = 0
Query:  124 PPQRYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKVWGSVTNNCRNLARTGRIALDRKYHARFSMLVISFSVTLRAHL----QRVVVSTELEALLPSWEADQVRM---NSCPPALIAMKLTHLINEAVGKN--EQRSDFYALYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTFTLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRRMTTTIARDVRSLLQTKDGMDF 422
            P  RYQS+ W   L+SL  S +  RIS  L      A     L    P   I A  S   H +  +ALGLLLVFRTN  Y RFWE R +W  V    R +A      + R+YH R + L+ +F   L+ HL    + V+   E +  L   E D VR+      PP  +   L+  +  A  ++  E  +D   LYLE L+G+L++  G   RI+  PVP +YSRHTSRFLSL+T TLP+ LV    ++ VP +  I W  +SIE IG  IE PF   + Q+ L  +  +I RDV  +L    G  F
Sbjct:   65 PESRYQSTYWRYTLESLPRSVMLGRISHRLVLVMCSAFLAACLNVAYPS--IFAGASTSAHSIAGTALGLLLVFRTNTGYSRFWEGRTLWTRVVTVIRRIAYFSSNYVPREYHVRLANLLCAFPYVLKQHLYSGMRGVLCVKEFQGFL---EGDDVRLLTRTQEPPVQVCKLLSACLRHAKEQHGGEAPNDRERLYLEGLIGQLVDLAGNCGRIVKVPVPLAYSRHTSRFLSLFTITLPYALVANCGFWVVPVVSGISWAFYSIESIGQYIENPFDVHASQIALNPLCQSITRDVAQILSPPSGSPF 366          
The following BLAST results are available for this feature:
BLAST of NO03G00830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29617.14.500e-14568.92Bestrophin-like protein [Nannochloropsis gaditana][more]
AFA52595.15.800e-6041.48hypothetical protein [Vaucheria litorea][more]
CEL96461.18.600e-5643.82unnamed protein product [Vitrella brassicaformis C... [more]
CEM01971.14.700e-5437.46unnamed protein product [Vitrella brassicaformis C... [more]
CEM06220.18.100e-5436.51unnamed protein product [Vitrella brassicaformis C... [more]
CBN74931.16.400e-5141.30conserved unknown protein [Ectocarpus siliculosus][more]
OSX68971.11.100e-4537.61hypothetical protein BU14_2020s0001 [Porphyra umbi... [more]
KOO29552.12.600e-4437.88membrane protein [Chrysochromulina sp. CCMP291][more]
XP_005709103.11.900e-4236.63hypothetical protein Gasu_03530 [Galdieria sulphur... [more]
CEL93106.13.200e-4237.79unnamed protein product [Vitrella brassicaformis C... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL070nonsL070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G00830.1NO03G00830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G00830.1NO03G00830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G00830 ID=NO03G00830|Name=NO03G00830|organism=Nannochloropsis oceanica|type=gene|length=3410bp
ATGACAACAACAGGAACATCAGCCATGGATAGTGCAGACACGACGGCTCA
CGCAAGAGCCAGGAGAAGAAAATCACGCAGCACTCATGGCAGCAGCAGCA
TTTATCGGAGAATAGGAGGTTTCTTCCCCTCCTTTCCTACCACCCCTCCC
CTTCTGCTCCTCCTCTTCCTCCTCCCCTTCTGCCTTTCCCTCCATCGTGC
CATCCCTTCAGCCTTCCTTGGCCCCAGCCACACTTGTTTCGTGGCTCGCC
ACCGCTCTCCATGTCCAACACCTCCCTTTCATAACTTTCACGTCGTCACT
GCCGCCACCTCCCTCCCCACACGGCGCACCCACACCCGCGCCCGCGGCGA
CGCTACCTTCCTCCTCGATCCGCCCCAGCGATACCAATCTTCGGATTGGG
TCGAAAATTTGCAGTCTTTGCTCGACTCTCGGATTGCCAAGCGAATATCA
GGTCACCTGTGGTTCAATACAGCGTGGGCAGGGGCGGTAACGGCGCTGTT
TGAATTCATGCCCCAGTGGCACATTGATGCTTATATTTCCCCTCTTCCGC
ATCAGCTGATGTCCTCGGCTCTGGGGCTGTTGTTGGTGTTTCGGACCAAg
tacgtggggctggagggagggaaagtggggggaaaagggcgcacagtaca
ggggaaggtagacggaccccataaatcatactcaccattctcccatccac
tctcttaccctctttccctccgtcccccaatgcctttatctccagCGCCG
CCTACGACCGATTTTGGGAAGCTCGAAAAGTGTGGGGCAGCGTCACCAAT
AACTGCAGGAATTTGGCGCGAACAGGCCGCATAGCCCTTGATCGGAAATA
CCACGCCCGATTCTCCATGTTGGTCATCTCCTTCTCCGTCACCCTGCGGG
CACACCTGCAGAGGGTTGTGGTGTCCACAGAATTGGAAGCACTGCTTCCT
TCGTGGGAAGCGGACCAGGTGAGGATGAATTCCTGCCCGCCTGCACTGAT
TGCCATGAAGTTAACGCACCTGATCAACGAAGCCGTGGGGAAGAACGAGC
AGCGGTCGGACTTCTACGCTCTTTATCTAGAGCAACTCGTGGGAGAGCTC
ATAAATTGCCTAGgtgagccctcctgcctgcccttctcttcttccttcta
tttccccatccgtccgtcgctccgtccctccctccctccctgcctccctc
cgggttgtttcgcctcggtcctttcttcccagttggtcgaaactgataat
attaagagcacatcggacgatgtttggaccctttcaccctctctcaatct
ccctccttccctccctctctccctcccagGCATGGCAGAGCGTATCCTCT
TGACGCCTGTTCCGGCCTCCTACTCTAGACACACCTCTCGATTCCTCTCA
CTCTACACCTTCACGCTCCCCTTCGTCCTCGTCCATGAGCTGGAGTATTT
TACCGTTCCCGCCATTGGCGCGATCTGCTGGACGCTCTTTTCAATgtaat
ggagggagggagggagggagggagggacagaggaagtgaaggcggggcag
ggaattttcccccgtaacgcgaaagatgagcggacacttattctccctcc
ctccctccgtccctttctgtcaccctctctccctttcctcctccctccca
gCGAGGAAATTGGACACCTCATCGAAGAGCCTTTCTCCGCCACTAGCAAG
CAACTTCCCCTCAGGCGCATGACCACCACCATCGCCCGCGACGTCCGCTC
TCTGCTCCAAACCAAGGACGGGATGGACTTTGACACCCTTCTTGACGAAG
ACTTGCTCTCAACGGAAGACAGAATCCTGGCCGAAAACGCCCCTCAATCG
ACCAAAGTGCAGTCCTTCGTTCCTTCCCTCGCGGCCCCTTCGATCTGGGG
TCCTGGGAAAGGGGATGAAACGAAGGAAGACATGGAGGGGGACGAGCAGG
GGGGGGAAGCGAAGAGGAGGGGGTTGGTGGGAGGGAGGACATTTTTTGGA
AAAAAAAGCAATGGGCCAGCCACGGCGGCCTCGGCGGCGGCGACACTGCA
GTCGACTGAGAGGATGAATATATAACGTGGTGGTGAATGAAAAATGATGG
GAAGTGAGGGGAGGAAGATGCAAGAGGGATTGAGGAAGAGGGAGCGTAGC
GACTTAGTGATTGACATGTGATAAAGAAACGAGGAACAAGGCGTGTATGT
GCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GAAGAAATTACACAGCCAGCGAGCACTAAACACACAACTAGCAAACAAGA
AAAGGAAACGATTCATCGTCATAATCGACGGGAGAAATCAACCTTAAAAA
AGACCAAAGAAAGGACGCATATATGAATAAATAGAGAGCTTGTTTGGTTG
TGTGGGAATGGATAAGGAGCTGCACGTTCTGGACCTATCTCCTCCACAGA
CGATGCTGTGAAGAAGAACTAGAAAATTTGTGCTTAGTCTTGACCCTCGA
TCTTCCTTCAATAGGATCTATATACATATACACATTTGTTTCATCATGTG
TGGGTGCAGGCCTGCTTAAAGTTCTGAGTCATCTCCTCTTCATTTGGTCG
CCTTCACTGCGTACGTCTTCGCACGCCACAGCGGCCCCATTCACCTGTCC
TGGCCTTCCATACCCACAGACCACTTCGTTTCGATGTCACAGCTGATTCC
TTGACGCCTTTACTGCGAAAGTCTTGTCGGGCGGCTCCTACTTATCCTTG
CTTACATATTCGCTTACTCCTCAGGAGAAGATGGAGGAAGGGAGGGAGAA
GAGGAGGAGAAAAGGGGAAATGAGGCGATGGGCTCAAAGGAGGAAGTAAA
GGAGAGGAGGAAGAGATTGAGTATGAGGAGGTTGGAGAGATTAAGGTCAG
TGAAGGAGCTGGAGACTGCGAGGGCGAGGTTTTGATCCTGGGAATGAGCG
GTGATGTGTCCGTTGATTTTTGCAGTTTCCGGGAAGGGAAGGAGGGAGAA
AGAGGGTAAACTGGACTGCGGGAAGGGAGACAAGAAAATGCAGTAGACCA
CATTGATTTGAGTGCACTATGTGATGTTCGGACGAGTAGCTCTTAGTTCA
CTTCACTTACCATTCTTTCTGTTCTGTGATTGTACACGAAGCGCAGGCAT
TACTTCGTCAGGGTATGGATTTCATGTAAAAAATTGCAGGCACTACATCA
CCAGAGCGTGAAATGTGATGTGCGATATTATAGAGTAGAGACGATGCGAA
CGATTGACACCAATTAGCAAATGAATCCGTGTCCCTGGACACGTCCAGAC
CCTCTTTCGGGACAAGTTGTCCAACGGTTCACGTTGTTGCGCAAAATATT
TGATTCTAAC
back to top

protein sequence of NO03G00830.1

>NO03G00830.1-protein ID=NO03G00830.1-protein|Name=NO03G00830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=519bp
MTTTGTSAMDSADTTAHARARRRKSRSTHGSSSIYRRIGGFFPSFPTTPP
LLLLLFLLPFCLSLHRAIPSAFLGPSHTCFVARHRSPCPTPPFHNFHVVT
AATSLPTRRTHTRARGDATFLLDPPQRYQSSDWVENLQSLLDSRIAKRIS
GHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTN
AAYDRFWEARKVWGSVTNNCRNLARTGRIALDRKYHARFSMLVISFSVTL
RAHLQRVVVSTELEALLPSWEADQVRMNSCPPALIAMKLTHLINEAVGKN
EQRSDFYALYLEQLVGELINCLGMAERILLTPVPASYSRHTSRFLSLYTF
TLPFVLVHELEYFTVPAIGAICWTLFSIEEIGHLIEEPFSATSKQLPLRR
MTTTIARDVRSLLQTKDGMDFDTLLDEDLLSTEDRILAENAPQSTKVQSF
VPSLAAPSIWGPGKGDETKEDMEGDEQGGEAKRRGLVGGRTFFGKKSNGP
ATAASAAATLQSTERMNI*
back to top
Synonyms
Publications