NO03G00650, NO03G00650 (gene) Nannochloropsis oceanica

Overview
NameNO03G00650
Unique NameNO03G00650
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2359
Alignment locationchr3:211256..213614 +

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Properties
Property NameValue
DescriptionDnaj heat shock n-terminal domain-containing
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:211256..213614 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036869J_dom_sf
IPR036671Znf_DHP_sf
IPR007872Znf_DHP
IPR001623DnaJ_domain
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Homology
BLAST of NO03G00650 vs. NCBI_GenBank
Match: EWM30015.1 (dnaj heat shock n-terminal domain-containing [Nannochloropsis gaditana])

HSP 1 Score: 133.3 bits (334), Expect = 7.000e-28
Identity = 88/188 (46.81%), Postives = 108/188 (57.45%), Query Frame = 0
Query:    7 TTSFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQ-PIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEH-GEGGWLVYPCRCGDGFRVRKDE----VEGRAGR--------------------------GIVVPCDGCSLRIRV 163
            T S Y+ILGVSP+ASP+TIKRAYQ AA ATHPDK     +   R  P  + S   P + +FL++QAAWD LR   +R AYD    R +R+E+  GF+A+EV+V EM+EEGGE  G+  WL+YPCRCGD FRV K+E    V G   R                               CDGCSLRIRV
Sbjct:    6 TLSLYDILGVSPAASPSTIKRAYQSAARATHPDKAAAHSKGGCRARPGHVSS---PRF-TFLEIQAAWDVLRARESRAAYDAAWGR-KRDEEVEGFIAEEVRVAEMEEEGGEEDGKERWLLYPCRCGDAFRVPKEEGRFLVGGTGSRETEEGGTEKVKMDRXXXXXXXXXXXXXXXXXCDGCSLRIRV 188          
BLAST of NO03G00650 vs. NCBI_GenBank
Match: XP_005853514.1 (hypothetical protein NGA_0483300, partial [Nannochloropsis gaditana CCMP526] >EKU22846.1 hypothetical protein NGA_0483300, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 95.5 bits (236), Expect = 1.600e-16
Identity = 63/119 (52.94%), Postives = 80/119 (67.23%), Query Frame = 0
Query:    7 TTSFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQ-PIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEH-GEGGW 124
            T S Y+ILGVSP+ASP+TIKRAYQ AA ATHPDK     +   R  P  + S   P + +FL++QAAWD LR   +R AYD    R QR+E+  GF+A+EV+V EM+EEGGE  G+  W
Sbjct:    6 TLSLYDILGVSPAASPSTIKRAYQAAARATHPDKAAAHSKGGCRARPGHVSS---PRF-TFLEIQAAWDVLRARESRAAYDAAWGR-QRDEEVEGFIAEEVRVAEMEEEGGEEDGKERW 119          
BLAST of NO03G00650 vs. NCBI_GenBank
Match: XP_002460344.1 (DPH4 homolog [Sorghum bicolor] >XP_021309514.1 DPH4 homolog [Sorghum bicolor] >OQU89620.1 hypothetical protein SORBI_3002G227200 [Sorghum bicolor] >OQU89621.1 hypothetical protein SORBI_3002G227200 [Sorghum bicolor])

HSP 1 Score: 93.2 bits (230), Expect = 8.100e-16
Identity = 60/171 (35.09%), Postives = 87/171 (50.88%), Query Frame = 0
Query:    9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRKDEVEG-----------------RAGRGIVVPCDGCSLRIRV 163
            + YE+L VS  A+   I+ AY+ AAL THPDK    L+    +P+    +       F  VQ AW+ LRHPT+R  YD+QLQ  ++  +    +A E++V +M  E     +   L+YPCRCGD F + K E+ G                  A   IV+ C  CSL+I++
Sbjct:   12 TLYEVLSVSEDATYDEIRAAYRSAALTTHPDKAHTTLE--SSVPSSEQQE-------FFSVQKAWEILRHPTSRADYDKQLQSSRQNIE---IIASEIEVGDMIIE--STADTLVLLYPCRCGDYFSITKCELSGMGHLVSGDGEVELQASDSASASIVLGCGSCSLKIKL 168          
BLAST of NO03G00650 vs. NCBI_GenBank
Match: OWZ14192.1 (Heat shock protein 40 [Phytophthora megakarya])

HSP 1 Score: 92.4 bits (228), Expect = 1.400e-15
Identity = 62/163 (38.04%), Postives = 87/163 (53.37%), Query Frame = 0
Query:    7 TTSFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQ---REEQGGGFVADEVKVDEMDEE--GGEHGEGGWLVY--PCRCGDGFRVRKDEVEGRAGRGIVVPCDGCSLRIRV 163
            T SFYE+LGV+ + S   ++RAY QAA   HPDK    +          +S  L     FL VQ A++TLR    R  YD ++   +   + EQ    ++DEV +DEM  E   GE G+   +++   CRCGD + + K+E++       VVPC GCSL IRV
Sbjct:    2 TVSFYEVLGVAATCSTDDVRRAYHQAARKYHPDKRSNGV---------TNSPILADEQQFLRVQEAYETLRSAELRRQYDAKILHDELVHKREQEVVVISDEVSLDEMQREVLQGEDGDEDEVIFTHQCRCGDMYEITKEELKDGVD---VVPCTGCSLHIRV 152          
BLAST of NO03G00650 vs. NCBI_GenBank
Match: NP_001142310.1 (uncharacterized LOC100274479 [Zea mays] >ACF88161.1 unknown [Zea mays])

HSP 1 Score: 91.7 bits (226), Expect = 2.400e-15
Identity = 59/149 (39.60%), Postives = 83/149 (55.70%), Query Frame = 0
Query:    9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPT--YPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRKDEVEGRAGRGIVVPCDG 156
            + YE+L VS  A+   I+ AY+ AAL THPDK +          T ++S S+P+     F  VQ AW+ LRHPT+R  YD+QLQ  ++  +    +A E++V +M  E         L+YPCRCGD F +   E+   +G GIVV  DG
Sbjct:   12 TLYEVLSVSEDATYDEIRAAYRSAALNTHPDKAQ----------TTLESSSVPSTEQQEFSSVQKAWEVLRHPTSRAYYDKQLQSSRQSIE---IIASEIQVGDMIVESAAGALE--LLYPCRCGDYFSITSGEL---SGMGIVVTGDG 142          
BLAST of NO03G00650 vs. NCBI_GenBank
Match: CBJ33333.1 (Heat shock protein 40 like protein/ DnaJ domain containing protein [Ectocarpus siliculosus])

HSP 1 Score: 90.1 bits (222), Expect = 6.800e-15
Identity = 66/157 (42.04%), Postives = 83/157 (52.87%), Query Frame = 0
Query:    9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPS--FLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRKDEV-EGRAGRGIVVPCDGCSLRIRV 163
            S YE+LGV  SAS   IK AYQ AALA+HPDK              + +  L    S  FL +QAAW+TLR    R  YD +L  Q R       V+DEV VD+M     +  +GG   + CRCG+ + V +DE+ EG      V+ C GCSL IRV
Sbjct:    2 SKYEVLGVKRSASLQEIKGAYQAAALASHPDK-----------QASLATAELKAQASQRFLLIQAAWETLRDEDLRQEYDCRLDLQARNI----VVSDEVNVDDMH---FDEADGGSFSHECRCGEAYVVTRDELNEGFE----VLDCPGCSLYIRV 136          
BLAST of NO03G00650 vs. NCBI_GenBank
Match: OQS05906.1 (hypothetical protein THRCLA_20501 [Thraustotheca clavata])

HSP 1 Score: 89.7 bits (221), Expect = 8.900e-15
Identity = 61/153 (39.87%), Postives = 80/153 (52.29%), Query Frame = 0
Query:   11 YEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRKDEVEGRAGRGI-VVPCDGCSLRIRV 163
            YE+LGV+ + S A IK+AY  A LA+HPDK R                S      F DV AA+  LR   TR AYD  LQ  + +++    ++DE+ +D+M     E        Y CRCGD + +  DE+E     G+ VVPCDGCSL IRV
Sbjct:    5 YEVLGVASNCSQAEIKQAYHAAILASHPDKQR----------------SSDMTSQFQDVHAAYQALRQVDTRRAYDLLLQENKLKQEVR--ISDEIDLDDMTYIENEETYS----YSCRCGDSYNITVDELE----EGMDVVPCDGCSLNIRV 131          
BLAST of NO03G00650 vs. NCBI_GenBank
Match: XP_004973988.1 (DPH4 homolog [Setaria italica])

HSP 1 Score: 89.0 bits (219), Expect = 1.500e-14
Identity = 59/171 (34.50%), Postives = 87/171 (50.88%), Query Frame = 0
Query:    9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRK-------------DEVEGRAGRG----IVVPCDGCSLRIRV 163
            + YE+L VS  A+   I+ AY+ AAL THPDK    L+    +P+    +       FL VQ AW+ LRHP +R  YD+QLQ  ++  +    +A E+K+ +M  E     +   L+YPCRCGD F +                EVE +A       +V+ C  CSL++R+
Sbjct:   71 TLYEVLSVSEDATYGEIRAAYKSAALNTHPDKGHMTLE--SSVPSSEQQE-------FLSVQRAWEILRHPASRADYDKQLQSSRQNIE---IIASEIKIGDMIVE--STADTVELLYPCRCGDYFSITSCELGDMGILVSGDGEVEQQASDSSSAFVVLGCGSCSLKVRL 227          
BLAST of NO03G00650 vs. NCBI_GenBank
Match: KQL02622.1 (hypothetical protein SETIT_015799mg, partial [Setaria italica])

HSP 1 Score: 89.0 bits (219), Expect = 1.500e-14
Identity = 59/171 (34.50%), Postives = 87/171 (50.88%), Query Frame = 0
Query:    9 SFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGGFVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRK-------------DEVEGRAGRG----IVVPCDGCSLRIRV 163
            + YE+L VS  A+   I+ AY+ AAL THPDK    L+    +P+    +       FL VQ AW+ LRHP +R  YD+QLQ  ++  +    +A E+K+ +M  E     +   L+YPCRCGD F +                EVE +A       +V+ C  CSL++R+
Sbjct:   28 TLYEVLSVSEDATYGEIRAAYKSAALNTHPDKGHMTLE--SSVPSSEQQE-------FLSVQRAWEILRHPASRADYDKQLQSSRQNIE---IIASEIKIGDMIVE--STADTVELLYPCRCGDYFSITSCELGDMGILVSGDGEVEQQASDSSSAFVVLGCGSCSLKVRL 184          
BLAST of NO03G00650 vs. NCBI_GenBank
Match: GAX97679.1 (Hypothetical protein PINS_005525 [Pythium insidiosum])

HSP 1 Score: 88.6 bits (218), Expect = 2.000e-14
Identity = 62/166 (37.35%), Postives = 86/166 (51.81%), Query Frame = 0
Query:   11 YEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRPIPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQR----QQREEQGGGFVADEVKVDEM------DEEGGEHGEGGWLVY--PCRCGDGFRVRKDEVEGRAGRGIVVPCDGCSLRIRVHR 165
            Y++L V+   S   I+RAY +AA   HPDK                         FL VQAA++ LR PT R  YD+QL +    +QR+ +    +ADE+ V EM      DEE G+ G+   +VY   CRCGD + + ++E+E       +VPC+GCSL IRV R
Sbjct:    9 YDVLQVTRECSADDIRRAYHRAARQHHPDK----------------QGERANEALFLRVQAAYEVLRDPTARVEYDKQLAQDALCRQRDVEDVR-IADEIAVSEMEREEIVDEECGDDGDARVVVYSHQCRCGDAYEITQEELEDGVD---IVPCNGCSLNIRVRR 154          
The following BLAST results are available for this feature:
BLAST of NO03G00650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30015.17.000e-2846.81dnaj heat shock n-terminal domain-containing [Nann... [more]
XP_005853514.11.600e-1652.94hypothetical protein NGA_0483300, partial [Nannoch... [more]
XP_002460344.18.100e-1635.09DPH4 homolog [Sorghum bicolor] >XP_021309514.1 DPH... [more]
OWZ14192.11.400e-1538.04Heat shock protein 40 [Phytophthora megakarya][more]
NP_001142310.12.400e-1539.60uncharacterized LOC100274479 [Zea mays] >ACF88161.... [more]
CBJ33333.16.800e-1542.04Heat shock protein 40 like protein/ DnaJ domain co... [more]
OQS05906.18.900e-1539.87hypothetical protein THRCLA_20501 [Thraustotheca c... [more]
XP_004973988.11.500e-1434.50DPH4 homolog [Setaria italica][more]
KQL02622.11.500e-1434.50hypothetical protein SETIT_015799mg, partial [Seta... [more]
GAX97679.12.000e-1437.35Hypothetical protein PINS_005525 [Pythium insidios... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL065nonsL065Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR051ngnoR051Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005887NSK005887Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G00650.1NO03G00650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|772gene_1243Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100802g2gene632Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G00650.1NO03G00650.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G00650 ID=NO03G00650|Name=NO03G00650|organism=Nannochloropsis oceanica|type=gene|length=2359bp
ATTGAGTGTGTGAGGTTTTCATATGTACGTAGAAGGATGAGACTCGGATC
AATTGTAGAATACAATGCCATGGAACGATTTCTGTTGTAGTATCTCTGTG
CTTGCACGTTAATAAGGAGGCAGGGCTTGCCCCGTCTCTCAACAGTGCCA
AGAAGACGAGACAATTCAGTGTGTCCGCTAGTGACTGCCACCTTGTCACG
CCCTCGTCCTTGATTGGTTTTCAGCCCACCATGAAAAACAGGGAGCGCAC
ATGTCCTGATTTGATAGAGAGACGGACAGGCCTGAGGTGGCACACAATCC
TTCGCCGTCGTTACGAACTTCTTGTGACCGTTGCCCCACCCTCTGCGCAC
TTCCTTACCCCCATTGCTCCTCCACCCAAAGGTAACCTCCATCAGACAAT
CGTCTCCAAGTCCTGCGCTGATGCGGGGATAAAATGACCAGAATGGAACT
CTCACGGCCACACGCAGTAGCTTCTCCTCTTAAACCTCCCCACCCCGAAA
ACATCCAGTCACCCTAGCTACCCACACACAGTACATGCAGCATGACCACT
CGACCATCGACTACTTCGTTTTACGAAATCCTAGGTGTCTCACCTTCGGC
CTCCCCCGCCACCATTAAACGCGCCTACCAACAAGCGGCGCTTGCCACCC
ACCCTGACAAAACTCGCCCGGTCCTACAGCCCATCAGACCTATTCCGACG
GGCATGGACAGTGACTCGCTCCCTACCTAgtaagcataagctctacgaaa
actacagtgcctcctttataccgcaaccgtgttactggtcattgcatttc
ctaagctcaatcccatcccatttgtttcctccctttcttagTCCCTCGTT
TCTTGACGTGCAAGCTGCCTGGGACACGCTTCGGCACCCCACCACCCGCG
ACGCCTACGACCAACAGCTCCAACGGCAACAGCGGGAAGAGCAGGGAGGG
GGTTTCGTCGCGGATGAAGTGAAAGTGGACGAGATGGACGAGGAAGGGGG
GGAGCACGGGGAGGGTGGGTGGTTGGTGTACCCATGCCGATGCGGGGACG
GTTTCCGAGTGAGGAAGGATGAGGTGGAGGGAAGGGCAGGGAGGGGCATA
GTGGTGCCTTGTGATGGATGCTCGCTACGGATACGTGTACATAGATAGCG
AGTAGAGAGAGGGAGGAAGAGAGGAACAGAAGAAAAGGGATAGCTGTATT
TGTAGTGTCTTCATTTACGTGTAAAAAGCAGAAGAAAAAAACATGTGACT
TGACGATCGGACACAGACAAGCCCATAGCTCATCTCTTAATCTCGCTTCG
AATGAATATGTTTATGGACAGTGCCTATTATCTTCTTGCGCCTCTCTTCC
CGTTCCTCCCATCCTCCCTCCCACATTCCCTCCCACCCCCTCCCTTCTTT
TTTTCCTTCTCCCTTGCCTGCTCTCTCTTCATACGTTCCCTCTATCTCCG
CCCTCCCTCCTTCCCTTTCCCCTTTCTATCTTTCTGTTCTCTTTAAGTGT
TCTTCTCCTCCGCTGTTCCATCTACGTATCTCTGTAGATCACGTGGCACT
ACTACTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
CTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCTTCTTCTTCACCTTCT
CCTTCTCCTTCTTGTTCTTCTCCTTCTTGTTCTTCTTCCTCCTCCTTCAT
CTTCATCTCCTCCTTCTTGTTCTCTTCTTTCCTTGTCTCTGACTGGCCTT
CTGCGCGCTATCTATATACACGACTCACTAGCTTTTCCCCCCTCTCCCTC
TAACTCTCCCTCTTTCTTTGTCATCCGCACATTCTCTCGATCCCTTCTCC
CGTTCCGTCACCTAATCACTCTATCTTCCATCTTTTCGCTTCATTATAAA
CAGCTTCATTCACTCCCTTCATCCCTCCCTCTCTCCCTCCTTCCCACCGC
TTCAACGTCTTCCTCTCTTTTCTCTCCCTCCCTCCGCATTGGTCCGTCCC
TCTTCCTCATCCCTCCAATACTCCTGCAATATCTTTCTTCCGCCCCCGTG
CCGTCCGCCGTAAGGGCCTGTTCCCACTTTCCTCCATCCCACCCTCCCCT
TCCTCCCCCCCCACCTCCTTCTCGACTGCCGCCCCTCCTCGCCCTCGCTT
CCCACGGGTGCAGCTGCTGTTGCTGCTGCTGGTACTGTTGCTGGTGTTGT
TGCTGCTTGTGATGGTCGTCATCGTCGTCGATGAAGTCGTGCTGGTGCTA
GTAGCCGCACTTCTTCTCGTCTGGCGCTTCCTCCCTTTCTCGGTCACCCT
CCCCTCCCT
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protein sequence of NO03G00650.1

>NO03G00650.1-protein ID=NO03G00650.1-protein|Name=NO03G00650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=165bp
MTTRPSTTSFYEILGVSPSASPATIKRAYQQAALATHPDKTRPVLQPIRP
IPTGMDSDSLPTYPSFLDVQAAWDTLRHPTTRDAYDQQLQRQQREEQGGG
FVADEVKVDEMDEEGGEHGEGGWLVYPCRCGDGFRVRKDEVEGRAGRGIV
VPCDGCSLRIRVHR*
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Synonyms
Publications