NO03G00630, NO03G00630 (gene) Nannochloropsis oceanica

Overview
NameNO03G00630
Unique NameNO03G00630
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3506
Alignment locationchr3:198890..202395 -

Link to JBrowse

Properties
Property NameValue
DescriptionRNA pseudouridylate synthase domain containing 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:198890..202395 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009451RNA modification
GO:0001522pseudouridine synthesis
GO:0009451RNA modification
GO:0001522pseudouridine synthesis
Vocabulary: Molecular Function
TermDefinition
GO:0009982pseudouridine synthase activity
GO:0003723RNA binding
GO:0009982pseudouridine synthase activity
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom
IPR006145PsdUridine_synth_RsuA/RluD
Homology
BLAST of NO03G00630 vs. NCBI_GenBank
Match: CBJ29939.1 (RNA pseudouridylate synthase domain containing 1 [Ectocarpus siliculosus])

HSP 1 Score: 137.1 bits (344), Expect = 1.400e-28
Identity = 103/345 (29.86%), Postives = 152/345 (44.06%), Query Frame = 0
Query:   90 PLKVLYRKHDLLVIDKPPDVRMQGAFVVTVENLVRHYCPLDAPPSLALKYIHQLDYATSGVLCLGLSRKAAAATAELFMNRQTEKEYVALVEGHLDPSLLPVLDDVSESDDPALTSSSLPPSAYLPGIHPEAGGRGXXXXXXXXXEGSRGVIYKPASTYY-RDKQLALEXXXXXXXXXXXXXXXXXXXXXXXXLGGMKWKEAKRTLKDISAECEALSAADKEAKLAGLAPLPPPSLPPSKDLGAFRRKGEGKGAFVVDVAITEFKHDFRVRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXARTHGLVVGYGRCEGKAVTKIRLRPISGRRHQLRVHCLHLGHPI 434
            P + L    D +VI+KP DVRM G F V V+ L+R++CP        LK++HQLD+ATSGVLC+ L R+AAA   E F  R+ +K Y+A+V+G +DP  +P  ++                        P++                  V + PA  ++ R K L L                            + W + K   K  S    + + ADK   +A        +   + D G FR  G+G+G   VD +++E   DFR+RL                             +RT   V+ +G   G++VTK+ +RP +GRRHQLR+H LH+GHPI
Sbjct:   43 PTETLSLDDDFVVINKPADVRMDGNFDVAVDKLIRYWCP--TLEDKELKWVHQLDFATSGVLCVALHREAAARGCEAFRERRAKKSYLAVVQGAVDPESVPRREE-XXXXXXXXXXXXXXXXXXXXXXXPDS------------------VQHTPAHGFFQRKKDLLLR----------AIELGETLSPEDLAFSKLSWGDIKFD-KAASRPFHSAAKADKIRAVAEAEAARFQTAQGAPDRGVFRAPGDGEGELRVDASVSEVPGDFRMRL-------------------DEEAGGKGKPSRTFVKVLEHGSYRGRSVTKVLMRPHTGRRHQLRLHALHMGHPI 336          
BLAST of NO03G00630 vs. NCBI_GenBank
Match: GBG24642.1 (Tubulin monoglycylase TTLL3 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 114.4 bits (285), Expect = 9.800e-22
Identity = 108/370 (29.19%), Postives = 154/370 (41.62%), Query Frame = 0
Query:   72 LKGKGDRRSEPRTLEEAGPLKVLYRKHDLLVIDKPPDVRMQGAFVVTVENLVRHYCPLDAPPSLALKYIHQLDYATSGVLCLGLSRKAAAATAELFMNRQTEKEYVALVEGHLDP----SLLPVLDDVSESDDPALTSSSLPPSAYLPGIHPEAGGRGXXXXXXXXXEGSRGVIYKPASTYYRDKQLALEXXXXXXXXXXXXXXXXXXXXXXXXLGGMKWKEAKRTLKDISAEC---EALSAADKEAKLAGLAPLPPPSLPPSKDLGAFRRKGEGKGAFVVDVAITE-FKHDFRVRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXARTHGLVVGYGRCEGKAVTKIRLRPISGRRHQLRVHCLHLGHPI 434
            + G  +RR    +L+E   + +L++  D LVIDKP D R+ G F VTVEN V+   P +A      +++HQLD+ATSGVLC+GL R+ A   ++LF  R T K YVALV+G L P    +  P+   +S+ D    TS     +A     H                E  R   + P     R ++                              G++ KE ++     S        L    ++A  +G  P+                       F V+ AI E  K DFR+ +                             ART  L + YG+  G+ VTK+ +RPI GRRHQLR+HC+HLG PI
Sbjct:   93 ISGPVNRRGGVSSLDEC-KVDILHQSDDHLVIDKPADFRLDGDFPVTVENFVKKIIPEEAKRP---RWVHQLDFATSGVLCIGLCRRGAGNASKLFQERLTRKYYVALVKGKLRPAKPAAKRPLPFVMSQGDAAEQTSVPTDQTADQEVCH----------------EAFR---FAPGQPSVRVRE----------------------CWERAEAFGIRTKELEQDEDSTSGSTLLERLLRNQYEDAASSGYLPV-----------------------FDVEGAIAEPSKDDFRMVI----------------------DNAAGREARTQILPIAYGQLHGEDVTKVIMRPIQGRRHQLRLHCMHLGFPI 372          
BLAST of NO03G00630 vs. NCBI_GenBank
Match: OQR86171.1 (RNA pseudouridylate synthase [Thraustotheca clavata])

HSP 1 Score: 107.1 bits (266), Expect = 1.600e-19
Identity = 102/380 (26.84%), Postives = 154/380 (40.53%), Query Frame = 0
Query:   77 DRRSEPRTLEEAGPLKVLYRKHDLLVIDKPPDVRMQGAFVVTVENLVRHYCPLDAPPSLALKYIHQLDYATSGVLCLGLSRKAAAATAELFMNRQTEKEYVALVEGHLDPSLLP----------VLDDVSESDDPALTSSSLPPSAYLPGIHPEAGGRGXXXXXXXXXEGSRGVIYKPASTYYRDKQLALEXXXXXXXXXXXXXXXXXXXXXXXXLGGMKWKEAKRTLKDISAECEALSAADKEAKLAGLAPLPPPSLPPSKDLGAFRRKGEGKGAFVVDVAITEFKHDFRVRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXARTHGLVVGYGRCEGKAVTKIRLRPISGRRHQLRVHCLHLGHPIGEE---GGREDSS 444
            D R  P TL++   L+VL +    LVI+K PDVR+ G F VT+E  +      D P     ++IHQLD+ATSG++C+GL+++A AA   LF  +  EKEY+ALV G + P + P          + + + + ++PAL         Y    H + G R             R    +       DK+   +                           +K  E+K    +   +        +  +    A    PS+   +       K E  G    +       H FR+ +                             + T  LV+GYG  +GK VTK+ LRP+SGRRHQLR+H  H G+PI  +   G  ED++
Sbjct:   39 DNRGGPLTLDQL-KLQVLSQSPHYLVINKGPDVRLDGDFNVTIEKALAR----DFPEIPKFRWIHQLDFATSGIMCIGLTKEATAAACALFQKKCVEKEYLALVHGTM-PMVPPAGVKRCAFSRLAEFIHDHENPALPKKQ---HEYKFTKHFK-GPRTGPSLFSMDQGVVRRNFNETGKISDEDKEFLHKKWNDLSDEVQQKYLERAAADKLRFEAELKALESKNHENNTQYDAPVSIPTGRRPRAMSEA---TPSIKRPRLNSEDNNKTEVMGYIFNEAIAPSPDHSFRMSIA-------------------PKTDPKAKVSTTVALVLGYGTIDGKPVTKVLLRPLSGRRHQLRLHLSHHGYPIVGDVTYGSEEDTA 386          
BLAST of NO03G00630 vs. NCBI_GenBank
Match: ETI46280.1 (hypothetical protein F443_09320 [Phytophthora parasitica P1569] >ETK86216.1 hypothetical protein L915_09138 [Phytophthora parasitica] >ETL39637.1 hypothetical protein L916_09051 [Phytophthora parasitica] >ETM46066.1 hypothetical protein L914_09002 [Phytophthora parasitica] >ETO74955.1 hypothetical protein F444_09402 [Phytophthora parasitica P1976])

HSP 1 Score: 104.8 bits (260), Expect = 7.700e-19
Identity = 108/393 (27.48%), Postives = 159/393 (40.46%), Query Frame = 0
Query:   75 KGDRRSEPRTLEEAGPLKVLYRKHDLLVIDKPPDVRMQGAFVVTVENLVRHYCPLDAPPSLALKYIHQLDYATSGVLCLGLSRKAAAATAELFMNRQTEKEYVALVEGHLDPSLLPVLDDVSESDDPALTSSSLPPSAYLPGI-------HPEAGGRGXXXXXXXXXEGSRGVIYKPASTYYRDKQLALE---XXXXXXXXXXXXXXXXXXXXXXXXLGGMKWKEAKRTLKDISAECEALSAADKEAKLAGLAPLPPPSLPPSKDLGAFRRK--------GEGKGAFVVDVAITEFKHD---FRVRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXARTHGLVVGYGRCEGKAVTKIRLRPISGRRHQLRVHCLHLGHPIGEE---GGREDSS 444
            K D R  P+TLE+   L++L +    +V++K PD RM GAF VT+E  +      D P     ++IHQLD+ATSGVL +G +++A A    LF  +Q +KEY+A+V+GHL        D V  +  PA   +       +  +       + + G R             RG  + P        +L  E                              M W +  +  KD   E    + ADK+  L  L+      L   K   A +RK         E   A++ D  I E       FR+ +G                            + T   V+G+   EG+ VTK+ LRP++GRRHQLR+H  H G PI  +   G +ED +
Sbjct:   80 KDDERGGPKTLEQL-QLRILSKDEHFVVLNKGPDERMDGAFDVTLEKALAR----DFPQVEKFRWIHQLDFATSGVLVVGANKEATATGCRLFREKQVQKEYLAVVQGHLP---FNPADSVDTAGVPAKACTFSKLGLLIQDMEEMERLRNQQRGSRAHQKMPGY----PRGARHGPNLFTMEQARLLRESQGDSRGEVRGTSNGAGTRELTPAELAFTKMTWHDLTKEEKDAYTE---KAKADKQRFLKELSEF----LSQEKVRLARKRKYESLDREDSEEPVAYIFDAPIIEPHRSTGVFRMLVG-------------------TEADAAAKQSTTICFVLGHAMYEGEPVTKVLLRPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDEA 434          
BLAST of NO03G00630 vs. NCBI_GenBank
Match: ETI46281.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK86217.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL39638.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM46067.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETO74956.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976])

HSP 1 Score: 104.8 bits (260), Expect = 7.700e-19
Identity = 108/393 (27.48%), Postives = 159/393 (40.46%), Query Frame = 0
Query:   75 KGDRRSEPRTLEEAGPLKVLYRKHDLLVIDKPPDVRMQGAFVVTVENLVRHYCPLDAPPSLALKYIHQLDYATSGVLCLGLSRKAAAATAELFMNRQTEKEYVALVEGHLDPSLLPVLDDVSESDDPALTSSSLPPSAYLPGI-------HPEAGGRGXXXXXXXXXEGSRGVIYKPASTYYRDKQLALE---XXXXXXXXXXXXXXXXXXXXXXXXLGGMKWKEAKRTLKDISAECEALSAADKEAKLAGLAPLPPPSLPPSKDLGAFRRK--------GEGKGAFVVDVAITEFKHD---FRVRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXARTHGLVVGYGRCEGKAVTKIRLRPISGRRHQLRVHCLHLGHPIGEE---GGREDSS 444
            K D R  P+TLE+   L++L +    +V++K PD RM GAF VT+E  +      D P     ++IHQLD+ATSGVL +G +++A A    LF  +Q +KEY+A+V+GHL        D V  +  PA   +       +  +       + + G R             RG  + P        +L  E                              M W +  +  KD   E    + ADK+  L  L+      L   K   A +RK         E   A++ D  I E       FR+ +G                            + T   V+G+   EG+ VTK+ LRP++GRRHQLR+H  H G PI  +   G +ED +
Sbjct:   80 KDDERGGPKTLEQL-QLRILSKDEHFVVLNKGPDERMDGAFDVTLEKALAR----DFPQVEKFRWIHQLDFATSGVLVVGANKEATATGCRLFREKQVQKEYLAVVQGHLP---FNPADSVDTAGVPAKACTFSKLGLLIQDMEEMERLRNQQRGSRAHQKMPGY----PRGARHGPNLFTMEQARLLRESQGDSRGEVRGTSNGAGTRELTPAELAFTKMTWHDLTKEEKDAYTE---KAKADKQRFLKELSEF----LSQEKVRLARKRKYESLDREDSEEPVAYIFDAPIIEPHRSTGVFRMLVG-------------------TEADAAAKQSTTICFVLGHAMYEGEPVTKVLLRPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDEA 434          
BLAST of NO03G00630 vs. NCBI_GenBank
Match: ETP16083.1 (hypothetical protein F441_09277 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 103.2 bits (256), Expect = 2.200e-18
Identity = 107/391 (27.37%), Postives = 158/391 (40.41%), Query Frame = 0
Query:   77 DRRSEPRTLEEAGPLKVLYRKHDLLVIDKPPDVRMQGAFVVTVENLVRHYCPLDAPPSLALKYIHQLDYATSGVLCLGLSRKAAAATAELFMNRQTEKEYVALVEGHLDPSLLPVLDDVSESDDPALTSSSLPPSAYLPGI-------HPEAGGRGXXXXXXXXXEGSRGVIYKPASTYYRDKQLALE---XXXXXXXXXXXXXXXXXXXXXXXXLGGMKWKEAKRTLKDISAECEALSAADKEAKLAGLAPLPPPSLPPSKDLGAFRRK--------GEGKGAFVVDVAITEFKHD---FRVRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXARTHGLVVGYGRCEGKAVTKIRLRPISGRRHQLRVHCLHLGHPIGEE---GGREDSS 444
            D R  P+TLE+   L++L +    +V++K PD RM GAF VT+E  +      D P     ++IHQLD+ATSGVL +G +++A A    LF  +Q +KEY+A+V+GHL        D V  +  PA   +       +  +       + + G R             RG  + P        +L  E                              M W +  +  KD   E    + ADK+  L  L+      L   K   A +RK         E   A++ D  I E       FR+ +G                            + T   V+G+   EG+ VTK+ LRP++GRRHQLR+H  H G PI  +   G +ED +
Sbjct:   82 DERGGPKTLEQL-QLRILSKDEHFVVLNKGPDERMDGAFDVTLEKALAR----DFPQVEKFRWIHQLDFATSGVLVVGANKEATATGCRLFREKQVQKEYLAVVQGHLP---FNPADSVDTAGVPAKACTFSKLGLLIQDMEEMERLRNQQRGSRAHQKMPGY----PRGARHGPNLFTMEQARLLRESQGDSRGEVRGTSNGAGTRELTPAELAFTKMTWHDLTKEEKDAYTE---KAKADKQRFLKELSEF----LSQEKVRLARKRKYESLDREDSEEPVAYIFDAPIIEPHRSTGVFRMLVG-------------------TEADAAAKQSTTICFVLGHAMYEGEPVTKVLLRPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDEA 434          
BLAST of NO03G00630 vs. NCBI_GenBank
Match: ETP16084.1 (hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 103.2 bits (256), Expect = 2.200e-18
Identity = 107/391 (27.37%), Postives = 158/391 (40.41%), Query Frame = 0
Query:   77 DRRSEPRTLEEAGPLKVLYRKHDLLVIDKPPDVRMQGAFVVTVENLVRHYCPLDAPPSLALKYIHQLDYATSGVLCLGLSRKAAAATAELFMNRQTEKEYVALVEGHLDPSLLPVLDDVSESDDPALTSSSLPPSAYLPGI-------HPEAGGRGXXXXXXXXXEGSRGVIYKPASTYYRDKQLALE---XXXXXXXXXXXXXXXXXXXXXXXXLGGMKWKEAKRTLKDISAECEALSAADKEAKLAGLAPLPPPSLPPSKDLGAFRRK--------GEGKGAFVVDVAITEFKHD---FRVRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXARTHGLVVGYGRCEGKAVTKIRLRPISGRRHQLRVHCLHLGHPIGEE---GGREDSS 444
            D R  P+TLE+   L++L +    +V++K PD RM GAF VT+E  +      D P     ++IHQLD+ATSGVL +G +++A A    LF  +Q +KEY+A+V+GHL        D V  +  PA   +       +  +       + + G R             RG  + P        +L  E                              M W +  +  KD   E    + ADK+  L  L+      L   K   A +RK         E   A++ D  I E       FR+ +G                            + T   V+G+   EG+ VTK+ LRP++GRRHQLR+H  H G PI  +   G +ED +
Sbjct:   82 DERGGPKTLEQL-QLRILSKDEHFVVLNKGPDERMDGAFDVTLEKALAR----DFPQVEKFRWIHQLDFATSGVLVVGANKEATATGCRLFREKQVQKEYLAVVQGHLP---FNPADSVDTAGVPAKACTFSKLGLLIQDMEEMERLRNQQRGSRAHQKMPGY----PRGARHGPNLFTMEQARLLRESQGDSRGEVRGTSNGAGTRELTPAELAFTKMTWHDLTKEEKDAYTE---KAKADKQRFLKELSEF----LSQEKVRLARKRKYESLDREDSEEPVAYIFDAPIIEPHRSTGVFRMLVG-------------------TEADAAAKQSTTICFVLGHAMYEGEPVTKVLLRPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDEA 434          
BLAST of NO03G00630 vs. NCBI_GenBank
Match: ETL92760.1 (hypothetical protein L917_08983 [Phytophthora parasitica])

HSP 1 Score: 102.8 bits (255), Expect = 2.900e-18
Identity = 107/391 (27.37%), Postives = 157/391 (40.15%), Query Frame = 0
Query:   77 DRRSEPRTLEEAGPLKVLYRKHDLLVIDKPPDVRMQGAFVVTVENLVRHYCPLDAPPSLALKYIHQLDYATSGVLCLGLSRKAAAATAELFMNRQTEKEYVALVEGHLDPSLLPVLDDVSESDDPALTSSSLPPSAYLPGI-------HPEAGGRGXXXXXXXXXEGSRGVIYKPASTYYRDKQLALE---XXXXXXXXXXXXXXXXXXXXXXXXLGGMKWKEAKRTLKDISAECEALSAADKEAKLAGLAPLPPPSLPPSKDLGAFRRK--------GEGKGAFVVDVAITEFKHD---FRVRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXARTHGLVVGYGRCEGKAVTKIRLRPISGRRHQLRVHCLHLGHPIGEE---GGREDSS 444
            D R  P+TLE+   L++L +    +V++K PD RM GAF VT+E  +      D P     ++IHQLD+ATSGVL +G ++ A A    LF  +Q +KEY+A+V+GHL        D V  +  PA   +       +  +       + + G R             RG  + P        +L  E                              M W +  +  KD   E    + ADK+  L  L+      L   K   A +RK         E   A++ D  I E       FR+ +G                            + T   V+G+   EG+ VTK+ LRP++GRRHQLR+H  H G PI  +   G +ED +
Sbjct:   82 DERGGPKTLEQL-QLRILSKDEQFVVLNKGPDERMDGAFDVTLEKALAR----DFPQVEKFRWIHQLDFATSGVLVVGANKDATATGCRLFREKQVQKEYLAVVQGHLP---FNPADSVDTAGVPAKACTFSKLGLLIQDMEEMERLRNQQRGSRAHQKMPGY----PRGARHGPNLFTMEQARLLRESQGDSRGEVRGTSNGAGTRELTPAELAFTKMTWHDLTKEEKDAYTE---KAKADKQRFLKELSEF----LSQEKVRLARKRKYESLDREDSEEPVAYIFDAPIIEPHRSTGVFRMLVG-------------------TEADAAAKQSTTICFVLGHAMYEGEPVTKVLLRPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDEA 434          
BLAST of NO03G00630 vs. NCBI_GenBank
Match: ETL92761.1 (hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 102.8 bits (255), Expect = 2.900e-18
Identity = 107/391 (27.37%), Postives = 157/391 (40.15%), Query Frame = 0
Query:   77 DRRSEPRTLEEAGPLKVLYRKHDLLVIDKPPDVRMQGAFVVTVENLVRHYCPLDAPPSLALKYIHQLDYATSGVLCLGLSRKAAAATAELFMNRQTEKEYVALVEGHLDPSLLPVLDDVSESDDPALTSSSLPPSAYLPGI-------HPEAGGRGXXXXXXXXXEGSRGVIYKPASTYYRDKQLALE---XXXXXXXXXXXXXXXXXXXXXXXXLGGMKWKEAKRTLKDISAECEALSAADKEAKLAGLAPLPPPSLPPSKDLGAFRRK--------GEGKGAFVVDVAITEFKHD---FRVRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXARTHGLVVGYGRCEGKAVTKIRLRPISGRRHQLRVHCLHLGHPIGEE---GGREDSS 444
            D R  P+TLE+   L++L +    +V++K PD RM GAF VT+E  +      D P     ++IHQLD+ATSGVL +G ++ A A    LF  +Q +KEY+A+V+GHL        D V  +  PA   +       +  +       + + G R             RG  + P        +L  E                              M W +  +  KD   E    + ADK+  L  L+      L   K   A +RK         E   A++ D  I E       FR+ +G                            + T   V+G+   EG+ VTK+ LRP++GRRHQLR+H  H G PI  +   G +ED +
Sbjct:   82 DERGGPKTLEQL-QLRILSKDEQFVVLNKGPDERMDGAFDVTLEKALAR----DFPQVEKFRWIHQLDFATSGVLVVGANKDATATGCRLFREKQVQKEYLAVVQGHLP---FNPADSVDTAGVPAKACTFSKLGLLIQDMEEMERLRNQQRGSRAHQKMPGY----PRGARHGPNLFTMEQARLLRESQGDSRGEVRGTSNGAGTRELTPAELAFTKMTWHDLTKEEKDAYTE---KAKADKQRFLKELSEF----LSQEKVRLARKRKYESLDREDSEEPVAYIFDAPIIEPHRSTGVFRMLVG-------------------TEADAAAKQSTTICFVLGHAMYEGEPVTKVLLRPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDEA 434          
BLAST of NO03G00630 vs. NCBI_GenBank
Match: ETP44140.1 (hypothetical protein F442_09243 [Phytophthora parasitica P10297])

HSP 1 Score: 102.4 bits (254), Expect = 3.800e-18
Identity = 107/391 (27.37%), Postives = 157/391 (40.15%), Query Frame = 0
Query:   77 DRRSEPRTLEEAGPLKVLYRKHDLLVIDKPPDVRMQGAFVVTVENLVRHYCPLDAPPSLALKYIHQLDYATSGVLCLGLSRKAAAATAELFMNRQTEKEYVALVEGHLDPSLLPVLDDVSESDDPALTSSSLPPSAYLPGI-------HPEAGGRGXXXXXXXXXEGSRGVIYKPASTYYRDKQLALE---XXXXXXXXXXXXXXXXXXXXXXXXLGGMKWKEAKRTLKDISAECEALSAADKEAKLAGLAPLPPPSLPPSKDLGAFRRK--------GEGKGAFVVDVAITEFKHD---FRVRLGLPXXXXXXXXXXXXXXXXXXXXXXXXXXARTHGLVVGYGRCEGKAVTKIRLRPISGRRHQLRVHCLHLGHPIGEE---GGREDSS 444
            D R  P+TLE+   L++L +    +V++K PD RM GAF VT+E  +      D P     ++IHQLD+ATSGVL +G ++ A A    LF  +Q +KEY+A+V+GHL        D V  +  PA   +       +  +       + + G R             RG  + P        +L  E                              M W +  +  KD   E    + ADK+  L  L+      L   K   A +RK         E   A++ D  I E       FR+ +G                            + T   V+G+   EG+ VTK+ LRP++GRRHQLR+H  H G PI  +   G +ED +
Sbjct:   82 DERGGPKTLEQL-QLRILSKDEHFVVLNKGPDERMDGAFDVTLEKALAR----DFPQVEKFRWIHQLDFATSGVLVVGANKDATATGCRLFREKQVQKEYLAVVQGHLP---FNPADSVDTAGVPAKACTFSKLGLLIQDMEEMERLRNQQRGSRAHQKMPGY----PRGARHGPNLFTMEQARLLRESQGDSRGEVRGTSNGAGTRELTPAELAFTKMTWHDLTKEEKDAYTE---KAKADKQRFLKELSEF----LSQEKVRLARKRKYESLDREDSEEPVAYIFDAPIIEPHRSTGVFRMLVG-------------------TEADAAAKQSTTICFVLGHAMYEGEPVTKVLLRPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDEA 434          
The following BLAST results are available for this feature:
BLAST of NO03G00630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ29939.11.400e-2829.86RNA pseudouridylate synthase domain containing 1 [... [more]
GBG24642.19.800e-2229.19Tubulin monoglycylase TTLL3 [Aurantiochytrium sp. ... [more]
OQR86171.11.600e-1926.84RNA pseudouridylate synthase [Thraustotheca clavat... [more]
ETI46280.17.700e-1927.48hypothetical protein F443_09320 [Phytophthora para... [more]
ETI46281.17.700e-1927.48hypothetical protein, variant 1 [Phytophthora para... [more]
ETP16083.12.200e-1827.37hypothetical protein F441_09277 [Phytophthora para... [more]
ETP16084.12.200e-1827.37hypothetical protein, variant 1 [Phytophthora para... [more]
ETL92760.12.900e-1827.37hypothetical protein L917_08983 [Phytophthora para... [more]
ETL92761.12.900e-1827.37hypothetical protein, variant [Phytophthora parasi... [more]
ETP44140.13.800e-1827.37hypothetical protein F442_09243 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL065nonsL065Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR050ngnoR050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G00630.2NO03G00630.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G00630.1NO03G00630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667226gene_1241Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101611g2gene1146Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G00630.2NO03G00630.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G00630.1NO03G00630.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G00630 ID=NO03G00630|Name=NO03G00630|organism=Nannochloropsis oceanica|type=gene|length=3506bp
ATGTCATCTCCTAGTCTCGCCAGTGCCATAAGATCTGCACCCCCGGTGAC
CTGTGCTTCCAATCCAACAATGACAGTGAGCAATCATACGACGAGgtacg
tgccctacaccatacacatctctctctcaagcgagtgcggtaccatgtca
cttgtttcaatgattttatacctccattagctcatggtatttcctctccc
ccctccccctttcctccaccccgcacgcgtagGAGGACCGCTCTCCCCAC
CACCACCGCTACTACCCTCACGACCAGCAGCGTTATCATTCCCACCCGCG
GGCAGGCTGAGCTGGACAAGCATAACACGGGAGAGGGAGACGATGTCAAT
CTGAAAGGAAAGGGAGACAGAAGGTCGGAGCCACGCACGTTGGAGGAGGC
AGGGCCGTTGAAGGTGTTGTACAGGAAGCATGACCTGCTGGTGATCGATA
AGgcgagtgcaagacagagtttgttagaaacgaaaaggagggagggcttc
aaaaatggcgaagatggagagtaaataatgcaaacgggtccaaggccgac
atttcatgcgcccaaaggcagccactgccgaatacacgttcacttattcc
tccctccctccctccttccctttttcccttcttccctcctccctagCCCC
CAGACGTTCGCATGCAAGGTGCCTTCGTCGTAACGGTCGAGAACCTCGTC
CGTCACTACTGCCCCCTCGATGCGCCTCCCTCACTCGCCCTCAAGTACAT
CCACCAACTGGACTACGCGACCTCGGGTGTGCTTTGCTTGGGCCTCAGCC
GCAAgtgaggagggagagagggagggaggaagggagaaagggtggaacga
gagctaggatatcttccaatacatgatttccatctgacgtcgaacgcctt
tttttgtctcccttcccttgtcatagGGCTGCTGCCGCCACCGCAGAGCT
GTTTATGAACCGTCAGACGGAGAAGGAATATGTGGCCCTGGTGGAGGGAC
ACCTTGACCCCTCCCTCCTTCCCGTCCTCGACGACGTATCGGAATCGGAC
GACCCAGCGCTCACCTCGTCCTCTCTTCCTCCCTCCGCCTATCTGCCGGG
CATCCACCCGGAGGCGGGAGGGAGGGGGAGGGGGGGGAAGGGGAGGGGGA
GGAAGGAGGGCTCGAGGGGAGTGATTTACAAGCCGGCGTCGACCTACTAC
AGAGATAAGCAGCTGGCGCTCGAGAGGAGGAAGAGAAAGGAGGAAGAGGA
GGGGGGAGGGCAGGAGGACGGGTGGACGGAGGAGGAGCGGAGGGTTTTGG
GGGGCATGAAGTGGAAAGAGGCCAAGCGCACGTTAAAGGgtcagcttagg
gaggggggaagggagggagagagggagggagggagggagggagggaggga
gagggaaagggatggatgcttcgatctcttttcatcctatcaatcccagt
atacgtatgactgtctgtgtacatacatacatacatacagtcatgcatgc
ctacgtataaatctgtatataatttatgctcatcgtgatcttctcccttt
ttcagACATCTCCGCCGAATGTGAAGCTCTGTCTGCCGCCGACAAAGAGG
CGAAATTAGCCGGCCTAGCGCCCTTGCCCCCTCCCTCCCTCCCTCCCTCG
AAGGACCTGGGAGCGTTTCGGAGGAAGGGGGAGGGGAAAGGCGCGTTTGT
GGTGGATGTGGCCATCACGGAGgtaggggagggagggagggagggaggga
gggagggagggagggagcgatagggagttgggacgggaaagataactccg
tggggagggaggaaaaaaaggagagagggaaggaggaagggagggaggga
gggagggaggaatggctgagagaaaactgacttgtcctcttcctttcctc
ctccatgccctcctgccacaatcaccacacagTTCAAACACGACTTCCGG
GTCCGACTTGGCCTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCGTC
CTCCCCTTCCGCCTCCTCTCCCTCCCTCCCTCCCCCCGCCCGTCGCGCTC
GTACGCACGGCCTGGTGGTGGGCTACGGCCGCTGTGAAGGGAAGGCGGTG
ACCAAGATACGGCTGCGGCCCATATCAGGGCGACGACACCAGCTCCGTGT
CCACTGCCTGCATCTGGGGCACCCGATAGGTGAGGAGGGAGGGAGGGAGG
ACTCTTCGCGAGCTGCCTCGGCTATATTGCCCGTACGTACTGTCTCTCCT
CACTCCCTCTTTCCCTCCCACTTTCCCTCCCTTCCTTTCTCTAGTTGGAG
ATAGCACCTACGGCGGAGACACCACCTCGCCTCGGATGATGCTTCACGCC
CTCGCGCTCACGCTCCCCTTCCCCGCGGGCAAGgtgtgtcatctcctctt
ccctccatctccccctcccttcctccctctttctctcttttcttctcttc
ctcgcatgtcctttcagctcttccccgtactcacactttcttttgccctc
ctctcctcctccctccctccctccctccctctctccctccctccctccct
cagGGCCCGGGTATGACATTGACCATCCGCACCCATGACCCCTTCGACGG
GAAGTACTTTGAGCCTCTCTGAAAGAGGGAGGGAGGGAGGGAGGGAGGGA
GGAAGGAAGGGAGGAAACAGGAACAGCAATATACATTAGAAGGGAAGACA
GAGGGAGAAGAAGAGAGATTCAGGAAGAGACAAAAAGAGAGAGACCACTT
GTATGTATTTATACATCTATATCAAGAAGGAGAATAGCTACAGCTAAATT
AGGGCAGGATGTGTAAATCTAAGAGGGGAAAAAGCAGGAGAGGGGGAATA
GCGATGTGTGTAAAATTTCGAGCAGAGATAACGAAGGGAGAGAGGAGGAA
AGATGGATGAAAGGAGGGAGGGAGGGAAGGAGAGGTACGGGTAAGCAAAT
TCTAAAGGCTATGACAGTGCGGGGAAAAGGTGATGATTAAGAGAGAGGAT
GAAAGCAGGGGAAGACCATCAGCAGAAGCCACGCAGGAAGAGGAGGAGAG
ATGGTCGTGAGGAGGAGGAAAGAAACTTAATGCATCGACTATGACTTGCT
TAGGCTCAACTGGTTGAAGACAGAGGGGCTGCGAGAGATAAATAAGGAGG
AGGTAGGTCTCGCGGTGGTGGGTGTCACACACATACACGCACACACAAAC
ACACACACACATACACACACACACACACATACACACACATGTATGTGTAC
AAAGGGAGAGGCTGTTCTGAGGGGGTAAAGTACACACACATATACATGAG
TCATAGAAAGACAGCGGTGAGGAGGAGGAGGGTGGAGGGAGCTCATGCCA
CGACTTGAGCACCCAAATGCCCCATGGGCCATATGGATACGAAGAAACAA
AAGCGATTAAAGAAAGAGGAAAAAATCAAGAAGAAGGAAGAGAGAAAGAA
GGTAGAGAGGCAGAAAAAGAATAGACGGAAAAGGAGAATGCTTACGACTT
GTTTAG
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protein sequence of NO03G00630.2

>NO03G00630.2-protein ID=NO03G00630.2-protein|Name=NO03G00630.2|organism=Nannochloropsis oceanica|type=polypeptide|length=475bp
MSSPSLASAIRSAPPVTCASNPTMTVSNHTTRRTALPTTTATTLTTSSVI
IPTRGQAELDKHNTGEGDDVNLKGKGDRRSEPRTLEEAGPLKVLYRKHDL
LVIDKPPDVRMQGAFVVTVENLVRHYCPLDAPPSLALKYIHQLDYATSGV
LCLGLSRKAAAATAELFMNRQTEKEYVALVEGHLDPSLLPVLDDVSESDD
PALTSSSLPPSAYLPGIHPEAGGRGRGGKGRGRKEGSRGVIYKPASTYYR
DKQLALERRKRKEEEEGGGQEDGWTEEERRVLGGMKWKEAKRTLKDISAE
CEALSAADKEAKLAGLAPLPPPSLPPSKDLGAFRRKGEGKGAFVVDVAIT
EFKHDFRVRLGLPPPPPPPPPPASSPSASSPSLPPPARRARTHGLVVGYG
RCEGKAVTKIRLRPISGRRHQLRVHCLHLGHPIGEEGGREDSSRAASAIL
PVRTVSPHSLFPSHFPSLPFSSWR*
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protein sequence of NO03G00630.1

>NO03G00630.1-protein ID=NO03G00630.1-protein|Name=NO03G00630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=486bp
MSSPSLASAIRSAPPVTCASNPTMTVSNHTTRRTALPTTTATTLTTSSVI
IPTRGQAELDKHNTGEGDDVNLKGKGDRRSEPRTLEEAGPLKVLYRKHDL
LVIDKPPDVRMQGAFVVTVENLVRHYCPLDAPPSLALKYIHQLDYATSGV
LCLGLSRKAAAATAELFMNRQTEKEYVALVEGHLDPSLLPVLDDVSESDD
PALTSSSLPPSAYLPGIHPEAGGRGRGGKGRGRKEGSRGVIYKPASTYYR
DKQLALERRKRKEEEEGGGQEDGWTEEERRVLGGMKWKEAKRTLKDISAE
CEALSAADKEAKLAGLAPLPPPSLPPSKDLGAFRRKGEGKGAFVVDVAIT
EFKHDFRVRLGLPPPPPPPPPPASSPSASSPSLPPPARRARTHGLVVGYG
RCEGKAVTKIRLRPISGRRHQLRVHCLHLGHPIVGDSTYGGDTTSPRMML
HALALTLPFPAGKGPGMTLTIRTHDPFDGKYFEPL*
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Synonyms
Publications