NO03G00440, NO03G00440 (gene) Nannochloropsis oceanica

Overview
NameNO03G00440
Unique NameNO03G00440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4196
Alignment locationchr3:138796..142991 +

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Properties
Property NameValue
DescriptionPentatricopeptide repeat-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:138796..142991 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR033443PPR_long
Homology
BLAST of NO03G00440 vs. NCBI_GenBank
Match: XP_005855283.1 (pentatricopeptide repeat-containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU21084.1 pentatricopeptide repeat-containing protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 695.7 bits (1794), Expect = 2.000e-196
Identity = 428/762 (56.17%), Postives = 504/762 (66.14%), Query Frame = 0
Query:    1 MAGALVRLCTRAWRSSITAYRPRVTSLSYPYVGVVAPATAVVHSIISTTASYHASPLRLGRKGGASAFASKKNATPSAQA-RRRGSPPGASTGGRAREGQLKRPVLHPSQRSTLPAVSDMSELVDPDFQEMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-LSKEEALRRLDVDKKLADMSLRESYGGKGT------LALPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPLLEYDRLLRAYGLQNRISDADALLQSLLHRQLPVTTRTLTAYVYACSVASPPQPEAAEEEMAEWEGRGLPPPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGDGREGGKEGVEGKDDEEIDLRARSRFKKPGEGKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVGKKKLDVPSLLISYEGSQDDXXXXXXXXXXXXXXXXXXXXXXXXXLLPSQARQVRGPSSSRXXXXXXSNSLVLKGGLLHALPSERERLQLDGILPFEGGEREADLVRARLPAGITVMDMQEKYLQAADAVVGEMEQRGMKLTTETMNLYLSVYTEGLRIQRALGVWEERF 755
            M GA +    R  RSS +A RP + S ++    +  P T +      T   YHA+    GRKGGASA + K+N +PS Q   RRG+PP +STGGRAREGQL+RP LHPSQR+TLPAV+D SEL+DPDF+ MM                                 LSKEEALRRLD+D+K ADM  RE+ G           ALPS                                C + EY+RLLRAYG+QNR+ +A ALL+SLL RQ PV+++TLTAYVYACS   PP PEAAE EM  WE  GLP PDAWTW  LVS YVRAGRREEAL  F+RM+LAGH ++LA CT+V+QAL  GR  GR+ RE +LDFW+DMR+ GVEPDAVAYTVL+ + C+ TGDLERGLS LDEMEQ+SV PTLH +NTLLFTAARAPLWF GYS L+YELL RLE SG A D VTY+GLVR+CAQAGNPLLAE Y+ERM+EEG  V++GVY+E LRAL RGQSAGVKGG IPKV  G E  KE     DDEEIDLRARSR + PG+GKR       XXXXXXXXXXXXXXXXXXXX     ++K+D  SLL+SY+G ++D                         LLP++   +RG           S+ LVL+GGLL   PSER R+QL+G+LPF  G RE D VR+R+P G+TV DMQEKY+QAADAV+  MEQRG+  TTETMNLYLSVYTEGLRIQRA GVW ERF
Sbjct:    1 MIGASIWPRARVGRSSSSAVRPLLPSFAFSGGWMHVPVT-IGMPTAPTIHCYHATIPLFGRKGGASALSPKRNTSPSTQRWMRRGAPPSSSTGGRAREGQLRRPFLHPSQRTTLPAVNDASELIDPDFELMMSELMRPIPSTGGNASLQDGGKEGREGAISNDEVLSKEEALRRLDLDRKYADMMRREARGSVAVGPSGSPTALPS------------PSPSSLDANVLPSSSPPAFQCAIAEYNRLLRAYGVQNRLPEAQALLRSLLSRQAPVSSQTLTAYVYACSACQPPAPEAAESEMQAWENNGLPSPDAWTWATLVSAYVRAGRREEALGTFQRMKLAGHPENLAACTSVLQALGQGR--GRKDREAMLDFWIDMRVAGVEPDAVAYTVLLQATCVSTGDLERGLSYLDEMEQLSVLPTLHVFNTLLFTAARAPLWFPGYSALLYELLARLESSGWAPDAVTYQGLVRICAQAGNPLLAERYIERMQEEGWGVTRGVYHEYLRALGRGQSAGVKGGGIPKV-TGME--KEPEREMDDEEIDLRARSRRRLPGQGKRVRRAEKLXXXXXXXXXXXXXXXXXXXXEVQGPQRKVDASSLLMSYDGGEED-AGGREKEEDATGKDADKSINPGGSLLPTEVETMRG---------HDSDHLVLQGGLLQRFPSERARIQLEGLLPFAEGVREVDWVRSRIPGGVTVKDMQEKYIQAADAVLRAMEQRGLTPTTETMNLYLSVYTEGLRIQRAWGVWRERF 734          
BLAST of NO03G00440 vs. NCBI_GenBank
Match: EWM29502.1 (pentatricopeptide repeat-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 488.0 bits (1255), Expect = 6.400e-134
Identity = 277/496 (55.85%), Postives = 327/496 (65.93%), Query Frame = 0
Query:    1 MAGALVRLCTRAWRSSITAYRPRVTSLSYPYVGVVAPATAVVHSIISTTASYHASPLRLGRKGGASAFASKKNATPSAQA-RRRGSPPGASTGGRAREGQLKRPVLHPSQRSTLPAVSDMSELVDPDFQEMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-LSKEEALRRLDVDKKLADMSLRESYGGKGT------LALPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPLLEYDRLLRAYGLQNRISDADALLQSLLHRQLPVTTRTLTAYVYACSVASPPQPEAAEEEMAEWEGRGLPPPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGR 489
            M GA +    R  RSS +A RP + S ++    +  P T +      T   YHA+    GRKGGASA + K+N +PS Q   RRG+PP +STGGRAREGQL+RP LHPSQR+TLPAV+D SEL+DPDF+ MM                                 LSKEEALRRLD+D+K ADM  RE+ G           ALPS                                C + EY+RLLRAYG+QNR+ +A ALL+SLL RQ PV+++TLTAYVYACS   PP PEAAE EM  WE  GLP PDAWTW  LVS YVRAGRREEAL  F+RM+LAGH ++LA CT+V+QAL  GR  GR+ RE +LDFW+DMR+ GVEPDAVAYTVL+ + C+ TGDLERGLS LDEMEQ+SV PTLH +NTLLFTAARAPLWF GYS L+YELL RLE SG A D VTY+GLVR+CAQAGNPLLAE Y+ERM+EEGR
Sbjct:    1 MIGASIWPRARVGRSSSSAVRPLLPSFAFSGGWMHVPVT-IGMPTAPTIHCYHATIPLFGRKGGASALSPKRNTSPSTQRWMRRGAPPSSSTGGRAREGQLRRPFLHPSQRTTLPAVNDASELIDPDFELMMSELMRPIPSTGGNASLQDGGKEGREGAISNDEVLSKEEALRRLDLDRKYADMMRREARGSVAVGPSGSPTALPS------------PSPSSLDANVLPSSSPPAFQCAIAEYNRLLRAYGVQNRLPEAQALLRSLLSRQAPVSSQTLTAYVYACSACQPPAPEAAESEMQAWENNGLPSPDAWTWATLVSAYVRAGRREEALGTFQRMKLAGHPENLAACTSVLQALGQGR--GRKDREAMLDFWIDMRVAGVEPDAVAYTVLLQATCVSTGDLERGLSYLDEMEQLSVLPTLHVFNTLLFTAARAPLWFPGYSALLYELLARLESSGWAPDAVTYQGLVRICAQAGNPLLAERYIERMQEEGR 481          
BLAST of NO03G00440 vs. NCBI_GenBank
Match: EWM29493.1 (hypothetical protein Naga_100287g9, partial [Nannochloropsis gaditana])

HSP 1 Score: 178.3 bits (451), Expect = 1.100e-40
Identity = 102/178 (57.30%), Postives = 125/178 (70.22%), Query Frame = 0
Query:  761 GEQGRALEGRRTRWGEVG--KVVADQTTYLHLVRMLVRAKRLGKAFEFLKEML---PSTTPSSSCTS--SVLLPSLPSSLPPPSADTLGVVMEALGRRGEIEPALYLLEVMVHDLHYTPKEWHLLPLRRALKARGLRHPLMPTDPRAWLEEGLKMRKKPDKGGRAVSQLVKSSMRAGQ 932
            G Q     G+ ++ G V   KV ADQ+TY +LVRMLVRAKR+  AFE +K ML   PS+TP     S                +A+TLGV+MEALGRRGE+EPALYLLEVMV DL YTP+EW L PLRR + ++GL HPLMP DPRAWL EGL++R++ DKGGR++ QL+KSSMRAGQ
Sbjct:    1 GRQEEGDAGKTSKEGTVALDKVRADQSTYYYLVRMLVRAKRVLPAFELVKAMLRPAPSSTPPDHAASLXXXXXXXXXXXXXXXNAETLGVLMEALGRRGEVEPALYLLEVMVEDLKYTPREWFLTPLRRIMISQGLSHPLMPPDPRAWLREGLQIRRRVDKGGRSLRQLIKSSMRAGQ 178          
BLAST of NO03G00440 vs. NCBI_GenBank
Match: EPR56540.1 (pentatricopeptide repeat domain-containing protein [Toxoplasma gondii GT1] >KFG33083.1 pentatricopeptide repeat domain-containing protein [Toxoplasma gondii GAB2-2007-GAL-DOM2] >KFG51422.1 pentatricopeptide repeat domain-containing protein [Toxoplasma gondii FOU])

HSP 1 Score: 78.2 bits (191), Expect = 1.500e-10
Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 0
Query:  303 PPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGD 521
            PP A  + AL+  +V A     A    ++M       D  V T ++  LV      ++ R+    FW      G+EPD V +TV+I + C   G+ ER ++LLD+M    + PT  TY  L+          K +++  +    ++    + +    Y  L+R CA  GN   A+  V +M  E    S  +Y  ++R  A          R+P+V D
Sbjct:  959 PPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHIPADCVVYTVLIDGLV----RAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKA-CAVRGEAERAINLLDDMRASGLHPTDVTYAELMHACCDR----KDFASKCFHFYHQMLAEDMPITLPVYAFLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAM-------RLPRVSD 1160          
BLAST of NO03G00440 vs. NCBI_GenBank
Match: XP_002366852.2 (pentatricopeptide repeat domain-containing protein [Toxoplasma gondii ME49] >EPT30481.1 pentatricopeptide repeat domain-containing protein [Toxoplasma gondii ME49])

HSP 1 Score: 78.2 bits (191), Expect = 1.500e-10
Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 0
Query:  303 PPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGD 521
            PP A  + AL+  +V A     A    ++M       D  V T ++  LV      ++ R+    FW      G+EPD V +TV+I + C   G+ ER ++LLD+M    + PT  TY  L+          K +++  +    ++    + +    Y  L+R CA  GN   A+  V +M  E    S  +Y  ++R  A          R+P+V D
Sbjct:  959 PPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHIPADCVVYTVLIDGLV----RAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKA-CAVRGEAERAINLLDDMRASGLHPTDVTYAELMHACCDR----KDFASKCFHFYHQMLAEDMPITLPVYAFLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAM-------RLPRVSD 1160          
BLAST of NO03G00440 vs. NCBI_GenBank
Match: ESS31680.1 (pentatricopeptide repeat domain-containing protein [Toxoplasma gondii VEG])

HSP 1 Score: 78.2 bits (191), Expect = 1.500e-10
Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 0
Query:  303 PPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGD 521
            PP A  + AL+  +V A     A    ++M       D  V T ++  LV      ++ R+    FW      G+EPD V +TV+I + C   G+ ER ++LLD+M    + PT  TY  L+          K +++  +    ++    + +    Y  L+R CA  GN   A+  V +M  E    S  +Y  ++R  A          R+P+V D
Sbjct:  962 PPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHIPADCVVYTVLIDGLV----RAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKA-CAVRGEAERAINLLDDMRASGLHPTDVTYAELMHACCDR----KDFASKCFHFYHQMLAEDMPITLPVYAFLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAM-------RLPRVSD 1163          
BLAST of NO03G00440 vs. NCBI_GenBank
Match: XP_008884340.1 (pentatricopeptide repeat domain-containing protein [Hammondia hammondi] >KEP65065.1 pentatricopeptide repeat domain-containing protein [Hammondia hammondi])

HSP 1 Score: 78.2 bits (191), Expect = 1.500e-10
Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 0
Query:  303 PPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGD 521
            PP A  + AL+  +V A     A    ++M       D  V T ++  LV      ++ R+    FW      G+EPD V +TV+I + C   G+ ER ++LLD+M    + PT  TY  L+          K +++  +    ++    + +    Y  L+R CA  GN   A+  V +M  E    S  +Y  ++R  A          R+P+V D
Sbjct:  966 PPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHIPADCVVYTVLIDGLV----RAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKA-CAVRGEAERAINLLDDMRASGLHPTDVTYAELMHACCDR----KDFASKCFHFYHQMLAEDMPITLPVYAFLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAM-------RLPRVSD 1167          
BLAST of NO03G00440 vs. NCBI_GenBank
Match: KFG34306.1 (pentatricopeptide repeat domain-containing protein [Toxoplasma gondii p89])

HSP 1 Score: 78.2 bits (191), Expect = 1.500e-10
Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 0
Query:  303 PPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGD 521
            PP A  + AL+  +V A     A    ++M       D  V T ++  LV      ++ R+    FW      G+EPD V +TV+I + C   G+ ER ++LLD+M    + PT  TY  L+          K +++  +    ++    + +    Y  L+R CA  GN   A+  V +M  E    S  +Y  ++R  A          R+P+V D
Sbjct:  962 PPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHIPADCVVYTVLIDGLV----RAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKA-CAVRGEAERAINLLDDMRASGLHPTDVTYAELMHACCDR----KDFASKCFHFYHQMLAEDMPITLPVYAFLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAM-------RLPRVSD 1163          
BLAST of NO03G00440 vs. NCBI_GenBank
Match: KFG60236.1 (pentatricopeptide repeat domain-containing protein [Toxoplasma gondii RUB])

HSP 1 Score: 78.2 bits (191), Expect = 1.500e-10
Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 0
Query:  303 PPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGD 521
            PP A  + AL+  +V A     A    ++M       D  V T ++  LV      ++ R+    FW      G+EPD V +TV+I + C   G+ ER ++LLD+M    + PT  TY  L+          K +++  +    ++    + +    Y  L+R CA  GN   A+  V +M  E    S  +Y  ++R  A          R+P+V D
Sbjct:  967 PPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHIPADCVVYTVLIDGLV----RAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKA-CAVRGEAERAINLLDDMRASGLHPTDVTYAELMHACCDR----KDFASKCFHFYHQMLAEDMPITLPVYAFLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAM-------RLPRVSD 1168          
BLAST of NO03G00440 vs. NCBI_GenBank
Match: KFH04764.1 (pentatricopeptide repeat domain-containing protein [Toxoplasma gondii VAND])

HSP 1 Score: 78.2 bits (191), Expect = 1.500e-10
Identity = 58/218 (26.61%), Postives = 94/218 (43.12%), Query Frame = 0
Query:  303 PPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGD 521
            PP A  + AL+  +V A     A    ++M       D  V T ++  LV      ++ R+    FW      G+EPD V +TV+I + C   G+ ER ++LLD+M    + PT  TY  L+          K +++  +    ++    + +    Y  L+R CA  GN   A+  V +M  E    S  +Y  ++R  A          R+P+V D
Sbjct:  962 PPSARVYAALIQAHVAAQDLPSAFALLRKMEDEHIPADCVVYTVLIDGLV----RAKKIRKAWRTFWTMRTWKGLEPDEVLFTVMIKA-CAVRGEAERAINLLDDMRASGLHPTDVTYAELMHACCDR----KDFASKCFHFYHQMLAEDMPITLPVYAFLLRACAAQGNVKRAKDVVRQMVRENVSFSSYMYTLVIRVFASAM-------RLPRVSD 1163          
The following BLAST results are available for this feature:
BLAST of NO03G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855283.12.000e-19656.17pentatricopeptide repeat-containing protein, parti... [more]
EWM29502.16.400e-13455.85pentatricopeptide repeat-containing protein [Nanno... [more]
EWM29493.11.100e-4057.30hypothetical protein Naga_100287g9, partial [Nanno... [more]
EPR56540.11.500e-1026.61pentatricopeptide repeat domain-containing protein... [more]
XP_002366852.21.500e-1026.61pentatricopeptide repeat domain-containing protein... [more]
ESS31680.11.500e-1026.61pentatricopeptide repeat domain-containing protein... [more]
XP_008884340.11.500e-1026.61pentatricopeptide repeat domain-containing protein... [more]
KFG34306.11.500e-1026.61pentatricopeptide repeat domain-containing protein... [more]
KFG60236.11.500e-1026.61pentatricopeptide repeat domain-containing protein... [more]
KFH04764.11.500e-1026.61pentatricopeptide repeat domain-containing protein... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL065nonsL065Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR050ngnoR050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005871NSK005871Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G00440.1NO03G00440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|37gene_1219Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100998g1gene1129Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G00440.1NO03G00440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G00440 ID=NO03G00440|Name=NO03G00440|organism=Nannochloropsis oceanica|type=gene|length=4196bp
GGGTGCCATGGCGTTGTGCTCTGTGCAGGGTGTTGGGGGTAGGTGGAGGG
TTGGTTTAATTGCTCGCTGAAGGACTCCTTCTTAGGGCTTCTGTAGGCAG
GGGAAGAGATGCAGCTGGCAAAGTAGAGCACACAAGGGGCGAACCAGGCA
TCACGGCACCTGGTCGCAGGGCCAAAATTGAGGCGCGCCTATGCATTGTA
CGAGCGCACGGGAGAGGGGAGGGCTGGGCTTGTAAGTGTGAGGAAGAGTG
TGGGCGGAACGAAGTCTTGAGAAATTGAGCGAGACAGTGGCGCTCGCGAT
GACGCTGATGACGGTCGGTAGTCTGCCGCATGTGACATTTTGCCTTTCCC
CAAAACCACACCATCCCACGCTCACCACAGGCCCCCGCACACATCTGCAA
AGGAAGCAAGGGGACAACAAGACAGGGGGCCTCAAATTAAGTTCAATAAG
CAATCCGCCTTCCCACAGCCAGTCCTTTTTCTAGCCCTACACTACCTCCC
TCCCCCCCACCCCACGACCACCCAAAGCCCGATAAACATAAAAAGATGGC
CGGTGCGTTGGTGCGGCTCTGCACGCGGGCCTGGCGCAGCAGTATCACCG
CTTACCGTCCACGTGTGACTTCACTATCATATCCCTACGTCGGTGTTGTT
GCTCCCGCTACTGCGGTAGTGgtacgtcctatcttcaccctcccgcctgg
ctagtccccctcaacttaaatcccataccctaagaacgccgatcaataag
gaatacacttgctggcttattttctactgtcttattgcagtcaagatgct
ggcttatcttctcctcgaccataccttgatcggcatgcataatacccatg
caaacaagcaccgtcaaaatgttagatgctcaacccctcaactcaccttc
acacacctacagCACTCCATCATCAGCACCACTGCCTCCTACCATGCATC
TCCTCTTCGTCTGGGCCGCAAAGGTGGTGCCTCGGCTTTCGCCTCTAAGA
AGAACGCCACTCCCTCCGCCCAAGCACGCAGGCGTGGGTCACCCCCCGGC
GCCAGCACAGGAGGGCGTGCACGTGAGGGCCAACTTAAACGACCTGTGTT
ACACCCTTCGCAGCGCTCCACCCTTCCTGCAGTCAGTGACATGTCCGAAT
TGGTAGACCCGGATTTTCAAGAAATGATGTCAGAGCTCATGCGTCCCCTA
GTGTCGCCCTCCTCCTCCCCCTCCTCCTCATTTTTGGAGGACGGAGGGGT
GGAGGGAGGGATGGAAGAAGGGGGCTTGTCGAAAGAGGAGGCCCTTCGAC
GCTTGGATGTGGACAAGAAGCTCGCTGATATGTCCTTGCGGGAGTCGTAT
GGGGGAAAGGGGACTCTGGCCCTCCCCTCCTCCTCCTCCTCCTCCTCCTC
ATCATCATCATCATCATTATCATCATCACCATCATCATCATTATCTCCTT
CATCCTCTCCTCCTCCCCTCCGTCACTGCCCCCTCCTCGAATACGACCGC
CTTCTCCGCGCCTACGGTCTTCAGAACCGCATTTCTGACGCTGATGCCCT
CCTTCAGTCCCTCCTTCACCGGCAGCTCCCCGTGACCACCCGCACGCTCA
CAGCTTATGTCTACGCGTGTTCCGTCGCCTCCCCTCCTCAACCCGAAGCC
GCGGAGGAAGAGATGGCGGAGTGGGAGGGGAGGGGATTGCCGCCGCCCGA
TGCCTGGACTTGGGGGGCGTTGGTGAGTGGGTATGTGAGGGCGGGAAGGC
GGGAGGAGGCACTGGATGCCTTCAAGAGGATGCGGCTGGCGGGACACGGG
CAGGATCTAGCGGTGTGCACGACGGTGATGCAGGCGCTTGTGGGAGGGAG
GGAGGGAGGGAGAGAGAGGAGGGAGAAGGTGCTTGATTTTTGGATGGACA
TGAGGTTGAACGGTGTGGAGCCTGATGCAGTGGCCTACACAGTCCTCATC
CACTCCCTCTGCCTCAAGACCGGTGACTTGGAGCGAGGGCTCTCCCTCCT
CGATGAGATGGAGCAGATGTCGGTCACCCCCACCCTACACACGTACAACA
CATTGCTCTTCACGGCCGCCCGTGCCCCCTTATGGTTTAAGGGTTATAGT
AATTTGGTGTATGAGTTGTTGGGAAGGCTGGAGGGAAGCGGGCTGGCGCT
GGATGACGTCACCTACCGGGGTTTGGTGCGTGTGTGTGCCCAGGCAGGGA
ATCCGTTACTTGCGGAATGCTACGTGGAAAGGATGAGGGAGGAAGGGAGG
GATGTCTCGCAGGGTGTCTATAACGAGTTGCTTCGGGCCTTAGCTCGCGG
GCAGTCAGCCGGGGTGAAGGGAGGCCGGATTCCCAAGGTGGGAGATGGAA
GGGAGGGAGGGAAGGAAGGCGTGGAGGGGAAGGATGATGAGGAGATTGAT
TTGCGGGCGCGGTCCAGGTTTAAGAAGCCGGGGGAGGGGAAGAGGAGGAG
GAAGGAACTCAAGATGCTGGAGCAGCTGCGGTTGGGGGGAGGGGGGGAGG
GGGGGGTGGGGGGAGGGAAGGACAAGGAGGAGATGGTGGGGAAGAAGAAG
TTGGATGTGCCGTCGTTGTTGATAAGTTATGAAGGGAGCCAGGATGATGA
GGACTGCGAGAGGATGGGGGAGGAGAAGGAGGAGGAGGAGGATGATGAGG
ACTATGACGAGGAGGGGAAGGCTCTCTTGCCCTCCCAGGCACGCCAAGTC
AGAGGGCCAAGCAGCAGCCGCAGCAACAAGAAAAACAACAGCAATAGTCT
CGTCCTGAAAGGAGGGCTTCTCCATGCCCTTCCCTCGGAGCGGGAACGAC
TGCAGCTCGATGGCATCTTGCCTTTTGAGGGGGGGGAACGCGAGGCTGAC
TTGGTGCGTGCACGACTCCCAGCGGGCATTACCGTGATGGACATGCAGGA
GAAGTACCTCCAGGCAGCGGACGCGGTGGTAGGGGAGATGGAGCAGAGGG
GGATGAAACTCACGACGGAGACGATGAATCTGTACCTGAGTGTGTACACG
GAGGGATTGCGAATTCAGCGGGCTCTAGGCGTGTGGGAGGAGAGGTTCGG
TGAGGGAGGGAAGGAGGGGGAGCAAGGGCGGGCCTTGGAAGGGAGGAGGA
CGAGATGGGGGGAAGTGGGTAAGGTGGTTGCGGATCAGACCACGTATTTG
CACCTGGTGCGGATGTTGGTAAGAGCCAAGCGGCTGGGCAAAGCCTTTGA
ATTCCTCAAGGAGATGCTCCCCTCCACAACTCCGTCCTCCTCCTGCACCT
CCTCCGTCCTCCTCCCCTCCCTCCCTTCCTCCCTCCCTCCACCCAGTGCC
GATACCCTTGGGGTTGTCATGGAGGCCTTGGGTCGACGGGGGGAGATCGA
ACCTGCCCTCTACCTTCTTGAAGTTATGGTGCACGACTTACACTACACCC
CAAAAGAATGGCATTTATTGCCCTTACGTCGTGCTTTAAAGGCACGGGGA
TTGCGACATCCACTTATGCCTACTGATCCACGGGCATGGTTGGAGGAGGG
CTTGAAAATGAGAAAGAAGCCGGATAAGGGTGGGAGGGCAGTGAGTCAGT
TGGTGAAAAGTAGCATGAGGGCGGGGCAATAAAGGCGGGGAAAGGAGGAG
TGGGGAGGGATGAGAGGGAAGGACTTTTTTTTGTAGAAAGAACTGGAATA
AAATTCAAAAGCTACCAAAAGTCAAACAGCAAGAAGGCGTGGATGAAAGT
GAGCTACAGTCCCGTTTTTCTATTCGAAAGAAAGTCTATCAAAATTGAAA
TAGAAAAGCAAGAAAAGACAAAGTGGTTACAGTTGGAAGAAGTGGCTTGA
TGTCGAATAGTGGGTGGTCATCATGAGTAAGGCGGTGCATTGTCGACGCC
TAATTATTTGTTGTCGTTCTGAAATCTACCTCTTTTGCGGCAAGCACGCC
CATTGCTGATGAGTTACAAGTCCTTGTTTGCATCGGTATGTCCCTTATCG
GTTTGTGAGGTGGGCCGGGGCAGAGGAGTTGGTTTTCGGAAAGTGTTTAC
GGGAAATGAATGACTCCAAGCAAGCCTTGTACACCTGTTACCGTCATAGC
TTGTACGGGGTAAAATGTCACAGCTTGCCAAGGCTGTACTGGCGCGTGAA
AGATGCGGTACTGGCGAGCGAACTGTCCCGCGGGAACGATCAGTGACCAT
GCCGTGACGTACCGCGGTGTCGCAAACTCCGATGGAACAAATCGTG
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protein sequence of NO03G00440.1

>NO03G00440.1-protein ID=NO03G00440.1-protein|Name=NO03G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=932bp
MAGALVRLCTRAWRSSITAYRPRVTSLSYPYVGVVAPATAVVHSIISTTA
SYHASPLRLGRKGGASAFASKKNATPSAQARRRGSPPGASTGGRAREGQL
KRPVLHPSQRSTLPAVSDMSELVDPDFQEMMSELMRPLVSPSSSPSSSFL
EDGGVEGGMEEGGLSKEEALRRLDVDKKLADMSLRESYGGKGTLALPSSS
SSSSSSSSSSLSSSPSSSLSPSSSPPPLRHCPLLEYDRLLRAYGLQNRIS
DADALLQSLLHRQLPVTTRTLTAYVYACSVASPPQPEAAEEEMAEWEGRG
LPPPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQA
LVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLER
GLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEG
SGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLR
ALARGQSAGVKGGRIPKVGDGREGGKEGVEGKDDEEIDLRARSRFKKPGE
GKRRRKELKMLEQLRLGGGGEGGVGGGKDKEEMVGKKKLDVPSLLISYEG
SQDDEDCERMGEEKEEEEDDEDYDEEGKALLPSQARQVRGPSSSRSNKKN
NSNSLVLKGGLLHALPSERERLQLDGILPFEGGEREADLVRARLPAGITV
MDMQEKYLQAADAVVGEMEQRGMKLTTETMNLYLSVYTEGLRIQRALGVW
EERFGEGGKEGEQGRALEGRRTRWGEVGKVVADQTTYLHLVRMLVRAKRL
GKAFEFLKEMLPSTTPSSSCTSSVLLPSLPSSLPPPSADTLGVVMEALGR
RGEIEPALYLLEVMVHDLHYTPKEWHLLPLRRALKARGLRHPLMPTDPRA
WLEEGLKMRKKPDKGGRAVSQLVKSSMRAGQ*
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Synonyms
Publications