NO03G00440.1, NO03G00440.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO03G00440.1
Unique NameNO03G00440.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3955
Alignment locationchr3:138796..142991 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:138796..142991 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO03G00440.1 vs.
Match: XP_005855283.1 (pentatricopeptide repeat-containing protein, partial [Nannochloropsis gaditana CCMP526]; EKU21084.1 pentatricopeptide repeat-containing protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 762.3 bits (1967), Expect = 1.700e-216
Identity = 456/765 (59.61%), Postives = 557/765 (72.81%), Query Frame = 0
Query:    1 MAGALVRLCTRAWRSSITAYRPRVTSLSYPYVGVVAPATAVVHSIISTTASYHASPLRLGRKGGASAFASKKNATPSAQA-RRRGSPPGASTGGRAREGQLKRPVLHPSQRSTLPAVSDMSELVDPDFQEMMSELMRPLVSPSSSPSSSFLEDGGVEGGMEEGG------LSKEEALRRLDVDKKLADMSLRESYGGKGTLALPSSSSSSSSSSSSSLSSSPSSSLSPSSSPPPLRHCPLLEYDRLLRAYGLQNRISDADALLQSLLHRQLPVTTRTLTAYVYACSVASPPQPEAAEEEMAEWEGRGLPPPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQALVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLERGLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEGSGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLRALARGQSAGVKGGRIPKVGDGREGGKEGVEGKDDEEIDLRARSRFKKPGEGKRRRKELKMLEQLRLGGGGEGGVGGGKDKEEMVG-KKKLDVPSLLISYEGSQDDEDCERMGEEKEEEEDDEDYDEE---GKALLPSQARQVRGPSSSRSNKKNNSNSLVLKGGLLHALPSERERLQLDGILPFEGGEREADLVRARLPAGITVMDMQEKYLQAADAVVGEMEQRGMKLTTETMNLYLSVYTEGLRIQRALGVWEERF 755
            M GA +    R  RSS +A RP + S ++    +  P T  + +   T   YHA+    GRKGGASA + K+N +PS Q   RRG+PP +STGGRAREGQL+RP LHPSQR+TLPAV+D SEL+DPDF+ MMSELMRP+ S   + S   L+DGG EG   EG       LSKEEALRRLD+D+K ADM  RE+   +G++A+  S S ++  S S   SS  +++ PSSSPP  + C + EY+RLLRAYG+QNR+ +A ALL+SLL RQ PV+++TLTAYVYACS   PP PEAAE EM  WE  GLP PDAWTW  LVS YVRAGRREEAL  F+RM+LAGH ++LA CT+V+QAL  GR  GR+ RE +LDFW+DMR+ GVEPDAVAYTVL+ + C+ TGDLERGLS LDEMEQ+SV PTLH +NTLLFTAARAPLWF GYS L+YELL RLE SG A D VTY+GLVR+CAQAGNPLLAE Y+ERM+EEG  V++GVY+E LRAL RGQSAGVKGG IPKV  G E  KE     DDEEIDLRARSR + PG+GKR R+  K+LE LR GG  EGG  GG++  E+ G ++K+D  SLL+SY+G ++D      G EKEE+   +D D+    G +LLP++   +RG         ++S+ LVL+GGLL   PSER R+QL+G+LPF  G RE D VR+R+P G+TV DMQEKY+QAADAV+  MEQRG+  TTETMNLYLSVYTEGLRIQRA GVW ERF
Sbjct:    1 MIGASIWPRARVGRSSSSAVRPLLPSFAFSGGWMHVPVTIGMPTA-PTIHCYHATIPLFGRKGGASALSPKRNTSPSTQRWMRRGAPPSSSTGGRAREGQLRRPFLHPSQRTTLPAVNDASELIDPDFELMMSELMRPIPSTGGNAS---LQDGGKEG--REGAISNDEVLSKEEALRRLDLDRKYADMMRREA---RGSVAVGPSGSPTALPSPSP--SSLDANVLPSSSPPAFQ-CAIAEYNRLLRAYGVQNRLPEAQALLRSLLSRQAPVSSQTLTAYVYACSACQPPAPEAAESEMQAWENNGLPSPDAWTWATLVSAYVRAGRREEALGTFQRMKLAGHPENLAACTSVLQALGQGR--GRKDREAMLDFWIDMRVAGVEPDAVAYTVLLQATCVSTGDLERGLSYLDEMEQLSVLPTLHVFNTLLFTAARAPLWFPGYSALLYELLARLESSGWAPDAVTYQGLVRICAQAGNPLLAERYIERMQEEGWGVTRGVYHEYLRALGRGQSAGVKGGGIPKV-TGME--KEPEREMDDEEIDLRARSRRRLPGQGKRVRRAEKLLEALRQGGK-EGGKEGGREGREVQGPQRKVDASSLLMSYDGGEEDAG----GREKEEDATGKDADKSINPGGSLLPTEVETMRG---------HDSDHLVLQGGLLQRFPSERARIQLEGLLPFAEGVREVDWVRSRIPGGVTVKDMQEKYIQAADAVLRAMEQRGLTPTTETMNLYLSVYTEGLRIQRAWGVWRERF 734          
The following BLAST results are available for this feature:
BLAST of NO03G00440.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
XP_005855283.11.700e-21659.61pentatricopeptide repeat-containing protein, parti... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00440NO03G00440Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO03G00440.1NO03G00440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO03G00440.1.cds1NO03G00440.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO03G00440.1.cds2NO03G00440.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO03G00440.1 ID=NO03G00440.1|Name=NO03G00440.1|organism=Nannochloropsis oceanica|type=mRNA|length=3955bp
GGGTGCCATGGCGTTGTGCTCTGTGCAGGGTGTTGGGGGTAGGTGGAGGG
TTGGTTTAATTGCTCGCTGAAGGACTCCTTCTTAGGGCTTCTGTAGGCAG
GGGAAGAGATGCAGCTGGCAAAGTAGAGCACACAAGGGGCGAACCAGGCA
TCACGGCACCTGGTCGCAGGGCCAAAATTGAGGCGCGCCTATGCATTGTA
CGAGCGCACGGGAGAGGGGAGGGCTGGGCTTGTAAGTGTGAGGAAGAGTG
TGGGCGGAACGAAGTCTTGAGAAATTGAGCGAGACAGTGGCGCTCGCGAT
GACGCTGATGACGGTCGGTAGTCTGCCGCATGTGACATTTTGCCTTTCCC
CAAAACCACACCATCCCACGCTCACCACAGGCCCCCGCACACATCTGCAA
AGGAAGCAAGGGGACAACAAGACAGGGGGCCTCAAATTAAGTTCAATAAG
CAATCCGCCTTCCCACAGCCAGTCCTTTTTCTAGCCCTACACTACCTCCC
TCCCCCCCACCCCACGACCACCCAAAGCCCGATAAACATAAAAAGATGGC
CGGTGCGTTGGTGCGGCTCTGCACGCGGGCCTGGCGCAGCAGTATCACCG
CTTACCGTCCACGTGTGACTTCACTATCATATCCCTACGTCGGTGTTGTT
GCTCCCGCTACTGCGGTAGTGCACTCCATCATCAGCACCACTGCCTCCTA
CCATGCATCTCCTCTTCGTCTGGGCCGCAAAGGTGGTGCCTCGGCTTTCG
CCTCTAAGAAGAACGCCACTCCCTCCGCCCAAGCACGCAGGCGTGGGTCA
CCCCCCGGCGCCAGCACAGGAGGGCGTGCACGTGAGGGCCAACTTAAACG
ACCTGTGTTACACCCTTCGCAGCGCTCCACCCTTCCTGCAGTCAGTGACA
TGTCCGAATTGGTAGACCCGGATTTTCAAGAAATGATGTCAGAGCTCATG
CGTCCCCTAGTGTCGCCCTCCTCCTCCCCCTCCTCCTCATTTTTGGAGGA
CGGAGGGGTGGAGGGAGGGATGGAAGAAGGGGGCTTGTCGAAAGAGGAGG
CCCTTCGACGCTTGGATGTGGACAAGAAGCTCGCTGATATGTCCTTGCGG
GAGTCGTATGGGGGAAAGGGGACTCTGGCCCTCCCCTCCTCCTCCTCCTC
CTCCTCCTCATCATCATCATCATCATTATCATCATCACCATCATCATCAT
TATCTCCTTCATCCTCTCCTCCTCCCCTCCGTCACTGCCCCCTCCTCGAA
TACGACCGCCTTCTCCGCGCCTACGGTCTTCAGAACCGCATTTCTGACGC
TGATGCCCTCCTTCAGTCCCTCCTTCACCGGCAGCTCCCCGTGACCACCC
GCACGCTCACAGCTTATGTCTACGCGTGTTCCGTCGCCTCCCCTCCTCAA
CCCGAAGCCGCGGAGGAAGAGATGGCGGAGTGGGAGGGGAGGGGATTGCC
GCCGCCCGATGCCTGGACTTGGGGGGCGTTGGTGAGTGGGTATGTGAGGG
CGGGAAGGCGGGAGGAGGCACTGGATGCCTTCAAGAGGATGCGGCTGGCG
GGACACGGGCAGGATCTAGCGGTGTGCACGACGGTGATGCAGGCGCTTGT
GGGAGGGAGGGAGGGAGGGAGAGAGAGGAGGGAGAAGGTGCTTGATTTTT
GGATGGACATGAGGTTGAACGGTGTGGAGCCTGATGCAGTGGCCTACACA
GTCCTCATCCACTCCCTCTGCCTCAAGACCGGTGACTTGGAGCGAGGGCT
CTCCCTCCTCGATGAGATGGAGCAGATGTCGGTCACCCCCACCCTACACA
CGTACAACACATTGCTCTTCACGGCCGCCCGTGCCCCCTTATGGTTTAAG
GGTTATAGTAATTTGGTGTATGAGTTGTTGGGAAGGCTGGAGGGAAGCGG
GCTGGCGCTGGATGACGTCACCTACCGGGGTTTGGTGCGTGTGTGTGCCC
AGGCAGGGAATCCGTTACTTGCGGAATGCTACGTGGAAAGGATGAGGGAG
GAAGGGAGGGATGTCTCGCAGGGTGTCTATAACGAGTTGCTTCGGGCCTT
AGCTCGCGGGCAGTCAGCCGGGGTGAAGGGAGGCCGGATTCCCAAGGTGG
GAGATGGAAGGGAGGGAGGGAAGGAAGGCGTGGAGGGGAAGGATGATGAG
GAGATTGATTTGCGGGCGCGGTCCAGGTTTAAGAAGCCGGGGGAGGGGAA
GAGGAGGAGGAAGGAACTCAAGATGCTGGAGCAGCTGCGGTTGGGGGGAG
GGGGGGAGGGGGGGGTGGGGGGAGGGAAGGACAAGGAGGAGATGGTGGGG
AAGAAGAAGTTGGATGTGCCGTCGTTGTTGATAAGTTATGAAGGGAGCCA
GGATGATGAGGACTGCGAGAGGATGGGGGAGGAGAAGGAGGAGGAGGAGG
ATGATGAGGACTATGACGAGGAGGGGAAGGCTCTCTTGCCCTCCCAGGCA
CGCCAAGTCAGAGGGCCAAGCAGCAGCCGCAGCAACAAGAAAAACAACAG
CAATAGTCTCGTCCTGAAAGGAGGGCTTCTCCATGCCCTTCCCTCGGAGC
GGGAACGACTGCAGCTCGATGGCATCTTGCCTTTTGAGGGGGGGGAACGC
GAGGCTGACTTGGTGCGTGCACGACTCCCAGCGGGCATTACCGTGATGGA
CATGCAGGAGAAGTACCTCCAGGCAGCGGACGCGGTGGTAGGGGAGATGG
AGCAGAGGGGGATGAAACTCACGACGGAGACGATGAATCTGTACCTGAGT
GTGTACACGGAGGGATTGCGAATTCAGCGGGCTCTAGGCGTGTGGGAGGA
GAGGTTCGGTGAGGGAGGGAAGGAGGGGGAGCAAGGGCGGGCCTTGGAAG
GGAGGAGGACGAGATGGGGGGAAGTGGGTAAGGTGGTTGCGGATCAGACC
ACGTATTTGCACCTGGTGCGGATGTTGGTAAGAGCCAAGCGGCTGGGCAA
AGCCTTTGAATTCCTCAAGGAGATGCTCCCCTCCACAACTCCGTCCTCCT
CCTGCACCTCCTCCGTCCTCCTCCCCTCCCTCCCTTCCTCCCTCCCTCCA
CCCAGTGCCGATACCCTTGGGGTTGTCATGGAGGCCTTGGGTCGACGGGG
GGAGATCGAACCTGCCCTCTACCTTCTTGAAGTTATGGTGCACGACTTAC
ACTACACCCCAAAAGAATGGCATTTATTGCCCTTACGTCGTGCTTTAAAG
GCACGGGGATTGCGACATCCACTTATGCCTACTGATCCACGGGCATGGTT
GGAGGAGGGCTTGAAAATGAGAAAGAAGCCGGATAAGGGTGGGAGGGCAG
TGAGTCAGTTGGTGAAAAGTAGCATGAGGGCGGGGCAATAAAGGCGGGGA
AAGGAGGAGTGGGGAGGGATGAGAGGGAAGGACTTTTTTTTGTAGAAAGA
ACTGGAATAAAATTCAAAAGCTACCAAAAGTCAAACAGCAAGAAGGCGTG
GATGAAAGTGAGCTACAGTCCCGTTTTTCTATTCGAAAGAAAGTCTATCA
AAATTGAAATAGAAAAGCAAGAAAAGACAAAGTGGTTACAGTTGGAAGAA
GTGGCTTGATGTCGAATAGTGGGTGGTCATCATGAGTAAGGCGGTGCATT
GTCGACGCCTAATTATTTGTTGTCGTTCTGAAATCTACCTCTTTTGCGGC
AAGCACGCCCATTGCTGATGAGTTACAAGTCCTTGTTTGCATCGGTATGT
CCCTTATCGGTTTGTGAGGTGGGCCGGGGCAGAGGAGTTGGTTTTCGGAA
AGTGTTTACGGGAAATGAATGACTCCAAGCAAGCCTTGTACACCTGTTAC
CGTCATAGCTTGTACGGGGTAAAATGTCACAGCTTGCCAAGGCTGTACTG
GCGCGTGAAAGATGCGGTACTGGCGAGCGAACTGTCCCGCGGGAACGATC
AGTGACCATGCCGTGACGTACCGCGGTGTCGCAAACTCCGATGGAACAAA
TCGTG
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protein sequence of NO03G00440.1

>NO03G00440.1-protein ID=NO03G00440.1-protein|Name=NO03G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=932bp
MAGALVRLCTRAWRSSITAYRPRVTSLSYPYVGVVAPATAVVHSIISTTA
SYHASPLRLGRKGGASAFASKKNATPSAQARRRGSPPGASTGGRAREGQL
KRPVLHPSQRSTLPAVSDMSELVDPDFQEMMSELMRPLVSPSSSPSSSFL
EDGGVEGGMEEGGLSKEEALRRLDVDKKLADMSLRESYGGKGTLALPSSS
SSSSSSSSSSLSSSPSSSLSPSSSPPPLRHCPLLEYDRLLRAYGLQNRIS
DADALLQSLLHRQLPVTTRTLTAYVYACSVASPPQPEAAEEEMAEWEGRG
LPPPDAWTWGALVSGYVRAGRREEALDAFKRMRLAGHGQDLAVCTTVMQA
LVGGREGGRERREKVLDFWMDMRLNGVEPDAVAYTVLIHSLCLKTGDLER
GLSLLDEMEQMSVTPTLHTYNTLLFTAARAPLWFKGYSNLVYELLGRLEG
SGLALDDVTYRGLVRVCAQAGNPLLAECYVERMREEGRDVSQGVYNELLR
ALARGQSAGVKGGRIPKVGDGREGGKEGVEGKDDEEIDLRARSRFKKPGE
GKRRRKELKMLEQLRLGGGGEGGVGGGKDKEEMVGKKKLDVPSLLISYEG
SQDDEDCERMGEEKEEEEDDEDYDEEGKALLPSQARQVRGPSSSRSNKKN
NSNSLVLKGGLLHALPSERERLQLDGILPFEGGEREADLVRARLPAGITV
MDMQEKYLQAADAVVGEMEQRGMKLTTETMNLYLSVYTEGLRIQRALGVW
EERFGEGGKEGEQGRALEGRRTRWGEVGKVVADQTTYLHLVRMLVRAKRL
GKAFEFLKEMLPSTTPSSSCTSSVLLPSLPSSLPPPSADTLGVVMEALGR
RGEIEPALYLLEVMVHDLHYTPKEWHLLPLRRALKARGLRHPLMPTDPRA
WLEEGLKMRKKPDKGGRAVSQLVKSSMRAGQ*
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mRNA from alignment at chr3:138796..142991+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO03G00440.1 ID=NO03G00440.1|Name=NO03G00440.1|organism=Nannochloropsis oceanica|type=mRNA|length=4196bp|location=Sequence derived from alignment at chr3:138796..142991+ (Nannochloropsis oceanica)
GGGTGCCATGGCGTTGTGCTCTGTGCAGGGTGTTGGGGGTAGGTGGAGGG TTGGTTTAATTGCTCGCTGAAGGACTCCTTCTTAGGGCTTCTGTAGGCAG GGGAAGAGATGCAGCTGGCAAAGTAGAGCACACAAGGGGCGAACCAGGCA TCACGGCACCTGGTCGCAGGGCCAAAATTGAGGCGCGCCTATGCATTGTA CGAGCGCACGGGAGAGGGGAGGGCTGGGCTTGTAAGTGTGAGGAAGAGTG TGGGCGGAACGAAGTCTTGAGAAATTGAGCGAGACAGTGGCGCTCGCGAT GACGCTGATGACGGTCGGTAGTCTGCCGCATGTGACATTTTGCCTTTCCC CAAAACCACACCATCCCACGCTCACCACAGGCCCCCGCACACATCTGCAA AGGAAGCAAGGGGACAACAAGACAGGGGGCCTCAAATTAAGTTCAATAAG CAATCCGCCTTCCCACAGCCAGTCCTTTTTCTAGCCCTACACTACCTCCC TCCCCCCCACCCCACGACCACCCAAAGCCCGATAAACATAAAAAGATGGC CGGTGCGTTGGTGCGGCTCTGCACGCGGGCCTGGCGCAGCAGTATCACCG CTTACCGTCCACGTGTGACTTCACTATCATATCCCTACGTCGGTGTTGTT GCTCCCGCTACTGCGGTAGTGGTACGTCCTATCTTCACCCTCCCGCCTGG CTAGTCCCCCTCAACTTAAATCCCATACCCTAAGAACGCCGATCAATAAG GAATACACTTGCTGGCTTATTTTCTACTGTCTTATTGCAGTCAAGATGCT GGCTTATCTTCTCCTCGACCATACCTTGATCGGCATGCATAATACCCATG CAAACAAGCACCGTCAAAATGTTAGATGCTCAACCCCTCAACTCACCTTC ACACACCTACAGCACTCCATCATCAGCACCACTGCCTCCTACCATGCATC TCCTCTTCGTCTGGGCCGCAAAGGTGGTGCCTCGGCTTTCGCCTCTAAGA AGAACGCCACTCCCTCCGCCCAAGCACGCAGGCGTGGGTCACCCCCCGGC GCCAGCACAGGAGGGCGTGCACGTGAGGGCCAACTTAAACGACCTGTGTT ACACCCTTCGCAGCGCTCCACCCTTCCTGCAGTCAGTGACATGTCCGAAT TGGTAGACCCGGATTTTCAAGAAATGATGTCAGAGCTCATGCGTCCCCTA GTGTCGCCCTCCTCCTCCCCCTCCTCCTCATTTTTGGAGGACGGAGGGGT GGAGGGAGGGATGGAAGAAGGGGGCTTGTCGAAAGAGGAGGCCCTTCGAC GCTTGGATGTGGACAAGAAGCTCGCTGATATGTCCTTGCGGGAGTCGTAT GGGGGAAAGGGGACTCTGGCCCTCCCCTCCTCCTCCTCCTCCTCCTCCTC ATCATCATCATCATCATTATCATCATCACCATCATCATCATTATCTCCTT CATCCTCTCCTCCTCCCCTCCGTCACTGCCCCCTCCTCGAATACGACCGC CTTCTCCGCGCCTACGGTCTTCAGAACCGCATTTCTGACGCTGATGCCCT CCTTCAGTCCCTCCTTCACCGGCAGCTCCCCGTGACCACCCGCACGCTCA CAGCTTATGTCTACGCGTGTTCCGTCGCCTCCCCTCCTCAACCCGAAGCC GCGGAGGAAGAGATGGCGGAGTGGGAGGGGAGGGGATTGCCGCCGCCCGA TGCCTGGACTTGGGGGGCGTTGGTGAGTGGGTATGTGAGGGCGGGAAGGC GGGAGGAGGCACTGGATGCCTTCAAGAGGATGCGGCTGGCGGGACACGGG CAGGATCTAGCGGTGTGCACGACGGTGATGCAGGCGCTTGTGGGAGGGAG GGAGGGAGGGAGAGAGAGGAGGGAGAAGGTGCTTGATTTTTGGATGGACA TGAGGTTGAACGGTGTGGAGCCTGATGCAGTGGCCTACACAGTCCTCATC CACTCCCTCTGCCTCAAGACCGGTGACTTGGAGCGAGGGCTCTCCCTCCT CGATGAGATGGAGCAGATGTCGGTCACCCCCACCCTACACACGTACAACA CATTGCTCTTCACGGCCGCCCGTGCCCCCTTATGGTTTAAGGGTTATAGT AATTTGGTGTATGAGTTGTTGGGAAGGCTGGAGGGAAGCGGGCTGGCGCT GGATGACGTCACCTACCGGGGTTTGGTGCGTGTGTGTGCCCAGGCAGGGA ATCCGTTACTTGCGGAATGCTACGTGGAAAGGATGAGGGAGGAAGGGAGG GATGTCTCGCAGGGTGTCTATAACGAGTTGCTTCGGGCCTTAGCTCGCGG GCAGTCAGCCGGGGTGAAGGGAGGCCGGATTCCCAAGGTGGGAGATGGAA GGGAGGGAGGGAAGGAAGGCGTGGAGGGGAAGGATGATGAGGAGATTGAT TTGCGGGCGCGGTCCAGGTTTAAGAAGCCGGGGGAGGGGAAGAGGAGGAG GAAGGAACTCAAGATGCTGGAGCAGCTGCGGTTGGGGGGAGGGGGGGAGG GGGGGGTGGGGGGAGGGAAGGACAAGGAGGAGATGGTGGGGAAGAAGAAG TTGGATGTGCCGTCGTTGTTGATAAGTTATGAAGGGAGCCAGGATGATGA GGACTGCGAGAGGATGGGGGAGGAGAAGGAGGAGGAGGAGGATGATGAGG ACTATGACGAGGAGGGGAAGGCTCTCTTGCCCTCCCAGGCACGCCAAGTC AGAGGGCCAAGCAGCAGCCGCAGCAACAAGAAAAACAACAGCAATAGTCT CGTCCTGAAAGGAGGGCTTCTCCATGCCCTTCCCTCGGAGCGGGAACGAC TGCAGCTCGATGGCATCTTGCCTTTTGAGGGGGGGGAACGCGAGGCTGAC TTGGTGCGTGCACGACTCCCAGCGGGCATTACCGTGATGGACATGCAGGA GAAGTACCTCCAGGCAGCGGACGCGGTGGTAGGGGAGATGGAGCAGAGGG GGATGAAACTCACGACGGAGACGATGAATCTGTACCTGAGTGTGTACACG GAGGGATTGCGAATTCAGCGGGCTCTAGGCGTGTGGGAGGAGAGGTTCGG TGAGGGAGGGAAGGAGGGGGAGCAAGGGCGGGCCTTGGAAGGGAGGAGGA CGAGATGGGGGGAAGTGGGTAAGGTGGTTGCGGATCAGACCACGTATTTG CACCTGGTGCGGATGTTGGTAAGAGCCAAGCGGCTGGGCAAAGCCTTTGA ATTCCTCAAGGAGATGCTCCCCTCCACAACTCCGTCCTCCTCCTGCACCT CCTCCGTCCTCCTCCCCTCCCTCCCTTCCTCCCTCCCTCCACCCAGTGCC GATACCCTTGGGGTTGTCATGGAGGCCTTGGGTCGACGGGGGGAGATCGA ACCTGCCCTCTACCTTCTTGAAGTTATGGTGCACGACTTACACTACACCC CAAAAGAATGGCATTTATTGCCCTTACGTCGTGCTTTAAAGGCACGGGGA TTGCGACATCCACTTATGCCTACTGATCCACGGGCATGGTTGGAGGAGGG CTTGAAAATGAGAAAGAAGCCGGATAAGGGTGGGAGGGCAGTGAGTCAGT TGGTGAAAAGTAGCATGAGGGCGGGGCAATAAAGGCGGGGAAAGGAGGAG TGGGGAGGGATGAGAGGGAAGGACTTTTTTTTGTAGAAAGAACTGGAATA AAATTCAAAAGCTACCAAAAGTCAAACAGCAAGAAGGCGTGGATGAAAGT GAGCTACAGTCCCGTTTTTCTATTCGAAAGAAAGTCTATCAAAATTGAAA TAGAAAAGCAAGAAAAGACAAAGTGGTTACAGTTGGAAGAAGTGGCTTGA TGTCGAATAGTGGGTGGTCATCATGAGTAAGGCGGTGCATTGTCGACGCC TAATTATTTGTTGTCGTTCTGAAATCTACCTCTTTTGCGGCAAGCACGCC CATTGCTGATGAGTTACAAGTCCTTGTTTGCATCGGTATGTCCCTTATCG GTTTGTGAGGTGGGCCGGGGCAGAGGAGTTGGTTTTCGGAAAGTGTTTAC GGGAAATGAATGACTCCAAGCAAGCCTTGTACACCTGTTACCGTCATAGC TTGTACGGGGTAAAATGTCACAGCTTGCCAAGGCTGTACTGGCGCGTGAA AGATGCGGTACTGGCGAGCGAACTGTCCCGCGGGAACGATCAGTGACCAT GCCGTGACGTACCGCGGTGTCGCAAACTCCGATGGAACAAATCGTG
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Coding sequence (CDS) from alignment at chr3:138796..142991+

>NO03G00440.1 ID=NO03G00440.1|Name=NO03G00440.1|organism=Nannochloropsis oceanica|type=CDS|length=2796bp|location=Sequence derived from alignment at chr3:138796..142991+ (Nannochloropsis oceanica)
ATGGCCGGTGCGTTGGTGCGGCTCTGCACGCGGGCCTGGCGCAGCAGTAT
CACCGCTTACCGTCCACGTGTGACTTCACTATCATATCCCTACGTCGGTG
TTGTTGCTCCCGCTACTGCGGTAGTGCACTCCATCATCAGCACCACTGCC
TCCTACCATGCATCTCCTCTTCGTCTGGGCCGCAAAGGTGGTGCCTCGGC
TTTCGCCTCTAAGAAGAACGCCACTCCCTCCGCCCAAGCACGCAGGCGTG
GGTCACCCCCCGGCGCCAGCACAGGAGGGCGTGCACGTGAGGGCCAACTT
AAACGACCTGTGTTACACCCTTCGCAGCGCTCCACCCTTCCTGCAGTCAG
TGACATGTCCGAATTGGTAGACCCGGATTTTCAAGAAATGATGTCAGAGC
TCATGCGTCCCCTAGTGTCGCCCTCCTCCTCCCCCTCCTCCTCATTTTTG
GAGGACGGAGGGGTGGAGGGAGGGATGGAAGAAGGGGGCTTGTCGAAAGA
GGAGGCCCTTCGACGCTTGGATGTGGACAAGAAGCTCGCTGATATGTCCT
TGCGGGAGTCGTATGGGGGAAAGGGGACTCTGGCCCTCCCCTCCTCCTCC
TCCTCCTCCTCCTCATCATCATCATCATCATTATCATCATCACCATCATC
ATCATTATCTCCTTCATCCTCTCCTCCTCCCCTCCGTCACTGCCCCCTCC
TCGAATACGACCGCCTTCTCCGCGCCTACGGTCTTCAGAACCGCATTTCT
GACGCTGATGCCCTCCTTCAGTCCCTCCTTCACCGGCAGCTCCCCGTGAC
CACCCGCACGCTCACAGCTTATGTCTACGCGTGTTCCGTCGCCTCCCCTC
CTCAACCCGAAGCCGCGGAGGAAGAGATGGCGGAGTGGGAGGGGAGGGGA
TTGCCGCCGCCCGATGCCTGGACTTGGGGGGCGTTGGTGAGTGGGTATGT
GAGGGCGGGAAGGCGGGAGGAGGCACTGGATGCCTTCAAGAGGATGCGGC
TGGCGGGACACGGGCAGGATCTAGCGGTGTGCACGACGGTGATGCAGGCG
CTTGTGGGAGGGAGGGAGGGAGGGAGAGAGAGGAGGGAGAAGGTGCTTGA
TTTTTGGATGGACATGAGGTTGAACGGTGTGGAGCCTGATGCAGTGGCCT
ACACAGTCCTCATCCACTCCCTCTGCCTCAAGACCGGTGACTTGGAGCGA
GGGCTCTCCCTCCTCGATGAGATGGAGCAGATGTCGGTCACCCCCACCCT
ACACACGTACAACACATTGCTCTTCACGGCCGCCCGTGCCCCCTTATGGT
TTAAGGGTTATAGTAATTTGGTGTATGAGTTGTTGGGAAGGCTGGAGGGA
AGCGGGCTGGCGCTGGATGACGTCACCTACCGGGGTTTGGTGCGTGTGTG
TGCCCAGGCAGGGAATCCGTTACTTGCGGAATGCTACGTGGAAAGGATGA
GGGAGGAAGGGAGGGATGTCTCGCAGGGTGTCTATAACGAGTTGCTTCGG
GCCTTAGCTCGCGGGCAGTCAGCCGGGGTGAAGGGAGGCCGGATTCCCAA
GGTGGGAGATGGAAGGGAGGGAGGGAAGGAAGGCGTGGAGGGGAAGGATG
ATGAGGAGATTGATTTGCGGGCGCGGTCCAGGTTTAAGAAGCCGGGGGAG
GGGAAGAGGAGGAGGAAGGAACTCAAGATGCTGGAGCAGCTGCGGTTGGG
GGGAGGGGGGGAGGGGGGGGTGGGGGGAGGGAAGGACAAGGAGGAGATGG
TGGGGAAGAAGAAGTTGGATGTGCCGTCGTTGTTGATAAGTTATGAAGGG
AGCCAGGATGATGAGGACTGCGAGAGGATGGGGGAGGAGAAGGAGGAGGA
GGAGGATGATGAGGACTATGACGAGGAGGGGAAGGCTCTCTTGCCCTCCC
AGGCACGCCAAGTCAGAGGGCCAAGCAGCAGCCGCAGCAACAAGAAAAAC
AACAGCAATAGTCTCGTCCTGAAAGGAGGGCTTCTCCATGCCCTTCCCTC
GGAGCGGGAACGACTGCAGCTCGATGGCATCTTGCCTTTTGAGGGGGGGG
AACGCGAGGCTGACTTGGTGCGTGCACGACTCCCAGCGGGCATTACCGTG
ATGGACATGCAGGAGAAGTACCTCCAGGCAGCGGACGCGGTGGTAGGGGA
GATGGAGCAGAGGGGGATGAAACTCACGACGGAGACGATGAATCTGTACC
TGAGTGTGTACACGGAGGGATTGCGAATTCAGCGGGCTCTAGGCGTGTGG
GAGGAGAGGTTCGGTGAGGGAGGGAAGGAGGGGGAGCAAGGGCGGGCCTT
GGAAGGGAGGAGGACGAGATGGGGGGAAGTGGGTAAGGTGGTTGCGGATC
AGACCACGTATTTGCACCTGGTGCGGATGTTGGTAAGAGCCAAGCGGCTG
GGCAAAGCCTTTGAATTCCTCAAGGAGATGCTCCCCTCCACAACTCCGTC
CTCCTCCTGCACCTCCTCCGTCCTCCTCCCCTCCCTCCCTTCCTCCCTCC
CTCCACCCAGTGCCGATACCCTTGGGGTTGTCATGGAGGCCTTGGGTCGA
CGGGGGGAGATCGAACCTGCCCTCTACCTTCTTGAAGTTATGGTGCACGA
CTTACACTACACCCCAAAAGAATGGCATTTATTGCCCTTACGTCGTGCTT
TAAAGGCACGGGGATTGCGACATCCACTTATGCCTACTGATCCACGGGCA
TGGTTGGAGGAGGGCTTGAAAATGAGAAAGAAGCCGGATAAGGGTGGGAG
GGCAGTGAGTCAGTTGGTGAAAAGTAGCATGAGGGCGGGGCAATAA
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Synonyms
Publications