NO03G00400, NO03G00400 (gene) Nannochloropsis oceanica

Overview
NameNO03G00400
Unique NameNO03G00400
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3300
Alignment locationchr3:128162..131461 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:128162..131461 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of NO03G00400 vs. NCBI_GenBank
Match: EWM27449.1 (hypothetical protein Naga_100107g10 [Nannochloropsis gaditana])

HSP 1 Score: 203.4 bits (516), Expect = 1.500e-48
Identity = 101/163 (61.96%), Postives = 122/163 (74.85%), Query Frame = 0 
Query:  257 TGEGMGPVTQLRYVIEEKRNPAIPRVQPAGDKSVRIHFSSRSSSSSSSRPPLHRPASETHIQKILLTISSTDRGQRIADMWQGDKLDTILQTLGSAKGLCERGFDLTVWFIAAWEISLEKKRVDQALFCERVGKPVETRYWDHYPSNIGALLSSRHRLAMAEV 420
            T +    + QL  V  E+RNPAIP +QPAGDK++R           S RPPLHRPASETHIQKI+LTISS DRGQRI+ +W GDKL TI +TL S +  CERGFDLTVWFIAAW+IS  +K +++ALFC+R+ KPV  RYWDH+  +I +LLSSRHRLAMAEV
Sbjct:  174 TSDEKASIVQL--VEAEERNPAIPLLQPAGDKAIR--------HPISGRPPLHRPASETHIQKIMLTISSFDRGQRISHLWAGDKLQTIQETLVSVREFCERGFDLTVWFIAAWKISQHEKIIEEALFCQRIHKPVHIRYWDHFSPDIRSLLSSRHRLAMAEV 326
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BLAST of NO03G00400 vs. NCBI_GenBank
Match: EWM29504.1 (hypothetical protein Naga_100601g2 [Nannochloropsis gaditana])

HSP 1 Score: 199.1 bits (505), Expect = 2.900e-47
Identity = 93/147 (63.27%), Postives = 117/147 (79.59%), Query Frame = 0 
Query:  273 EKRNPAIPRVQPAGDKSVRIHFSSRSSSSSSSRPPLHRPASETHIQKILLTISSTDRGQRIADMWQGDKLDTILQTLGSAKGLCERGFDLTVWFIAAWEISLEKKRVDQALFCERVGKPVETRYWDHYPSNIGALLSSRHRLAMAEV 420
            E  NPAIP +QPAG+K+ R           S RPPLHRPASETH+QKI+LTISS DRG+RI+D+W GDKL TIL+TL S + LCERGFDLTVWFIAAW+IS +++ +++ALFC+R  +PV+ RYWDH+P ++G  LSSRHRLAMA+V
Sbjct:  184 EGGNPAIPLLQPAGEKATR--------PPISGRPPLHRPASETHVQKIILTISSIDRGERISDLWAGDKLLTILKTLVSVRELCERGFDLTVWFIAAWKISQQRELIEEALFCQRTQEPVQIRYWDHFPPDVGGFLSSRHRLAMAKV 322
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BLAST of NO03G00400 vs. NCBI_GenBank
Match: XP_005855277.1 (hypothetical protein NGA_0073800, partial [Nannochloropsis gaditana CCMP526] >EKU21078.1 hypothetical protein NGA_0073800, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 140.6 bits (353), Expect = 1.200e-29
Identity = 59/91 (64.84%), Postives = 78/91 (85.71%), Query Frame = 0 
Query:  329 RGQRIADMWQGDKLDTILQTLGSAKGLCERGFDLTVWFIAAWEISLEKKRVDQALFCERVGKPVETRYWDHYPSNIGALLSSRHRLAMAEV 420
            RG+RI+D+W GDKL TIL+TL S + LCERGFDLTVWFIAAW+IS +++ +++ALFC+R  +PV+ RYWDH+P ++G  LSSRHRLAMA+V
Sbjct:    1 RGERISDLWAGDKLLTILKTLVSVRELCERGFDLTVWFIAAWKISQQRELIEEALFCQRTQEPVQIRYWDHFPPDVGGFLSSRHRLAMAKV 91
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BLAST of NO03G00400 vs. NCBI_GenBank
Match: CBJ28240.1 (hypothetical protein Esi_0097_0005 [Ectocarpus siliculosus])

HSP 1 Score: 75.5 bits (184), Expect = 4.800e-10
Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 0 
Query:  319 KILLTISSTDRGQRIADMWQGDKLDTILQTLGSAKGLCERGFDLTVWFIAAWEISLEKKRVDQALFCERVGKPVETRYWDHYPSNIGALLSSRHRLAM 417
            +IL  ++S DRG+R+   ++ DKLD IL  +   +  CE GF  TV  IAAWE+S  +  V   LFC R G  V      H PS+IG  LS +HR+ M
Sbjct:  395 RILFVMTSFDRGRRLGPSFKKDKLDFILLMMDEIREACEAGFSPTVHLIAAWELSGVEVFVRDRLFCRRTGAHVPYSLEVH-PSSIGNDLSIKHRIFM 491
The following BLAST results are available for this feature:
BLAST of NO03G00400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 4
Match NameE-valueIdentityDescription
EWM27449.11.500e-4861.96hypothetical protein Naga_100107g10 [Nannochlorops... [more]
EWM29504.12.900e-4763.27hypothetical protein Naga_100601g2 [Nannochloropsi... [more]
XP_005855277.11.200e-2964.84hypothetical protein NGA_0073800, partial [Nannoch... [more]
CBJ28240.14.800e-1042.86hypothetical protein Esi_0097_0005 [Ectocarpus sil... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL065nonsL065Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR050ngnoR050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G00400.5NO03G00400.5-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G00400.4NO03G00400.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G00400.3NO03G00400.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G00400.2NO03G00400.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G00400.1NO03G00400.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G00400.5NO03G00400.5Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G00400.4NO03G00400.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G00400.3NO03G00400.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G00400.2NO03G00400.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G00400.1NO03G00400.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G00400 ID=NO03G00400|Name=NO03G00400|organism=Nannochloropsis oceanica|type=gene|length=3300bp
CGTCCATCTACGTGATCAAGGCACTCGTCCCTCGTAACTTTTTTTCCTTC
GAAAGGCTAATAACTAGGTCTCTACCAACCTGTTCACCTTTAAGCGCTAC
ACCCGACATGTATTTATTCCTGTGCGCCTGTGCATTTCATAACGCAATGG
CCCATACCTTTTCGTTGGCTAAGGCCAAAATATCGACAGACAGCCAAGCA
ATAACGCTCGTATTCAGTACTTATCTTTTCCTCCACTTACTGCACGACAA
AAGAGGAGGGAGGAACACACGCACTCCTATCCCCGAGGACCTGGCCTGCA
CCCGGCCTTCGCCCATCCCCTGTCATCCAGGCACGCAAGCATGCTGGGCA
AAGGCAGCATCGCCAAGCCCGTCCAGGGGAATGTGCCTAGCAAGCGTCAC
CTCGCCCTCGGGCAATACATGACAGATGCAACCGAAAGGGACAGCGACGG
CAGTAGAGTGTACACGCCAGCAGGCAGGGGCCCAAGCCAGCGACGCAAGC
GCCTGGGTTGGTTCGTTGTGGGGGCCCTGGTCTTGGTATCCATTACGCTT
AATGTCGTGGCCTTCCGCGGAGACGTGAGAGACAGGGACTTAGTCAATCA
GGAAAATAAGCCGATGGGAGAGGCAAAGCGGGCATCGTCGTGGTTGCTCT
GGCCGGAAGAGTTGACGTTGCGATATTACTTTCAGCGCTTGGGCAGCATT
GTGGGAGGAGGATATGCGATGGACGAGGAAAGGAAGAAGGGGCAGAAGGA
GAAAGAGGTGGTAGGCAAAAACATTGACGCGATAAGTGTAAGTGGCATGC
GGGAAGGGGAAGGTAAGGAAGGAGAAGGGAGAGCAGAGGGAGCAGCAGCT
GCAGCATCAGCGGCAGAGACAGAAGGAGGAGTCCCGCCTTTGTCGCCCCC
CCGACCACAGTCAGACATAAGCCATCACAGGGACACGGATGCAGCCCTAA
TACCCATAAATGAGAAAGTCCCGCACAGGCAAGAAGAGGCGGCGGGGCGA
CCTCAGGAGGAGAAGGGAGAGGACGAAGAGGAGGTGCTGGTAGAAGGGAA
GGAGAACAAGGGTGAAAGAAATGAGGACGGAAACGAAGAGCAAGAGGCAG
GCGCCAAGACAGGAGAAGGAATGGGCCCAGTAACACAATTAAGATATGTC
ATCGAGGAGAAGCGGAATCCGGCCATCCCCCGCGTTCAACCGGCGGGGGA
CAAATCCGTCCGCATCCACTTCAGCAGCAGAAGCAGCAGCAGCAGCAGCA
GTCGACCGCCCCTGCACCGGCCCGCCTCGGAGACCCACATCCAAAAAATA
TTGTTGACCATCTCAAGCACCGATAGAGGGCAACGGATAGCAGATATGTG
GCAGGGAGACAAGCTCGATACGATCCTTCAGACGCTGGGCAGCGCGAAGG
GGTTGTGTGAGCGGGGCTTTGATCTGACGGTCTGGTTTATTGCTGCCTGG
GAGATCTCGCTTGAGAAGAAGAGGGTTGACCAGGCCCTCTTCTGTGAGAG
AGTGGGGAAGCCGGTGGAGACCAGGTATTGGGATCACTACCCTAGTAATA
TTGGGGCCTTGCTGTCTTCGAGGCACAGGCTGGCCATGGCCGAGGTGTTT
Ggtagggaggaagggaaggagaggagggaagaggaggacaaaaggggaaa
gacggggtggcaggttgattcactaagaaacgtccggatgagaagtttaa
ataattgctgaccaaattaacccccctctccctccttcactccttttccc
ccttcctccctccctcgaccagACGAGTACGATTTCTTCATCTCCATCGA
GGACGACATGTACGTCACGCCCTATCACTTCGACTCCTACCTCCACGCCA
GTAGTCAGCTCGCGCTCACCACCGACCCCTTCGCCCTCGAGCATTATCTT
GCGGGCTTCTCCCGTAAGGAACACGACAAGAATAACCAAGTCCATGAGGG
AGAGTGGGCGATATGGGAGACGGATGCCAAGGACTACACAGCCATTGAGC
TGAAGGGAGCAGGGTGGTGGGGAAAGGTCTCAGGAAATCCACATCAAGGC
ATGTGGATGGCCACGAGGGAGCAGGTGATGAATCTGGACATGAGGTGCAA
GGATGGATTTATTCACCTCCGAAACCCGGACAAGGCGGATTGGGTGGAGG
TGCGCCGAGGAGGGAGGGGAGGCGGAAGGGAGGGGATTGACGAGCTGGAC
GCACTGTGCCACACACCTGTACCCTTAACATCCTTTCCCCTATTCCCACA
ACACATGCCTTATTACTATCGCCCTTGTCCTTCCAGTTTTGGAGCGGCGC
CCTCCAGgtaagtaccaagttacctccgcacttttactcatttccttcct
tcctcatttccccctttagccagcaagagcactcactcgccgttctccct
cccttatttcttgcgttctctctacagCTATACGACAGCCCTGCCTACTG
CGAGGGCCTCCGTAAAGTCCTACCTCTTGATGACGCCAATGGGGGTTTTG
AATCCCTCACTGTGTGGCATATGACCGACTCTAAATTGCACTCGAGAGGG
AAAGGTGTCACACCAGTGCGAGAAGTGATCGCGTACCTTGAGGACGACAA
GGCGAGGAAGATTGCAGGGCGGAAGGAAAGGGTTGATGGATAGTCGAATA
TCGGTTTTACTTTACATCGTCCCTCATACGTCACTTTTTGAGCGATCGAC
TGAGCGGTCTGGCAAACAGTGATCAGGCCGTGCAGGCCGGAGTTAAATGA
GATGTAACTAAATAGAGACGTGAGTGGTAGTTGATCAATACAGTGTCAGG
CAGACAGGACAAATTTGGCTGGATGCGCGATGCACACACGGCATTTAGGC
AAGGGAGGGGAGACGAACGACAGGAGCGACTGAAAGATTGAGAAGTCTGC
AGAACAAAGACGCTAGAGCTTGCTGGGGGTCCGCGTAAGTCTATGCCAAT
ATCCTGCCGAGCCAGAACAATGTAATATCAACCGAATAAGAAATCGAGCG
GGTCTCTGACGTTTCCCGTGTTATTCGTGTTGATTTTGATTTATTTGCGA
GGTCGTATTGTGGTTTAGCAGCCAAAACGCCACGGCGAAGCGATGCACGG
CCTTTTCATTGTTTGCCAGACCGCTCGGTCGATCGCTCGAAAAGTGACAT
GTAAGGGACGATGTACGGTCCTCATCGTATGGACGTGATCCTTGAAGCAT
CTTGAATATTTTTGCGAAAGATTTTAGCATAATAGAGGTGTGTACCGTGC
ATGATACGGGTCTAAAGAGGAGAAATGTAGGATGAGGAACCATTGAGGGC
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protein sequence of NO03G00400.5

>NO03G00400.5-protein ID=NO03G00400.5-protein|Name=NO03G00400.5|organism=Nannochloropsis oceanica|type=polypeptide|length=600bp
MLGKGSIAKPVQGNVPSKRHLALGQYMTDATERDSDGSRVYTPAGRGPSQ
RRKRLGWFVVGALVLVSITLNVVAFRGDVRDRDLVNQENKPMGEAKRASS
WLLWPEELTLRYYFQRLGSIVGGGYAMDEERKKGQKEKEVVGKNIDAISV
SGMREGEGKEGEGRAEGAAAAASAAETEGGVPPLSPPRPQSDISHHRDTD
AALIPINEKVPHRQEEAAGRPQEEKGEDEEEVLVEGKENKGERNEDGNEE
QEAGAKTGEGMGPVTQLRYVIEEKRNPAIPRVQPAGDKSVRIHFSSRSSS
SSSSRPPLHRPASETHIQKILLTISSTDRGQRIADMWQGDKLDTILQTLG
SAKGLCERGFDLTVWFIAAWEISLEKKRVDQALFCERVGKPVETRYWDHY
PSNIGALLSSRHRLAMAEVFDEYDFFISIEDDMYVTPYHFDSYLHASSQL
ALTTDPFALEHYLAGFSRKEHDKNNQVHEGEWAIWETDAKDYTAIELKGA
GWWGKVSGNPHQGMWMATREQVMNLDMRCKDGFIHLRNPDKADWVEVRRG
GRGGGREGIDELDALCHTPVPLTSFPLFPQHMPYYYRPCPSSFGAAPSR*
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protein sequence of NO03G00400.4

>NO03G00400.4-protein ID=NO03G00400.4-protein|Name=NO03G00400.4|organism=Nannochloropsis oceanica|type=polypeptide|length=457bp
MLGKGSIAKPVQGNVPSKRHLALGQYMTDATERDSDGSRVYTPAGRGPSQ
RRKRLGWFVVGALVLVSITLNVVAFRGDVRDRDLVNQENKPMGEAKRASS
WLLWPEELTLRYYFQRLGSIVGGGYAMDEERKKGQKEKEVVGKNIDAISV
SGMREGEGKEGEGRAEGAAAAASAAETEGGVPPLSPPRPQSDISHHRDTD
AALIPINEKVPHRQEEAAGRPQEEKGEDEEEVLVEGKENKGERNEDGNEE
QEAGAKTGEGMGPVTQLRYVIEEKRNPAIPRVQPAGDKSVRIHFSSRSSS
SSSSRPPLHRPASETHIQKILLTISSTDRGQRIADMWQGDKLDTILQTLG
SAKGLCERGFDLTVWFIAAWEISLEKKRVDQALFCERVGKPVETRYWDHY
PSNIGALLSSRHRLAMAEVFGREEGKERREEEDKRGKTGWQVDSLRNVRM
RSLNNC*
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protein sequence of NO03G00400.3

>NO03G00400.3-protein ID=NO03G00400.3-protein|Name=NO03G00400.3|organism=Nannochloropsis oceanica|type=polypeptide|length=631bp
MLGKGSIAKPVQGNVPSKRHLALGQYMTDATERDSDGSRVYTPAGRGPSQ
RRKRLGWFVVGALVLVSITLNVVAFRGDVRDRDLVNQENKPMGEAKRASS
WLLWPEELTLRYYFQRLGSIVGGGYAMDEERKKGQKEKEVVGKNIDAISV
SGMREGEGKEGEGRAEGAAAAASAAETEGGVPPLSPPRPQSDISHHRDTD
AALIPINEKVPHRQEEAAGRPQEEKGEDEEEVLVEGKENKGERNEDGNEE
QEAGAKTGEGMGPVTQLRYVIEEKRNPAIPRVQPAGDKSVRIHFSSRSSS
SSSSRPPLHRPASETHIQKILLTISSTDRGQRIADMWQGDKLDTILQTLG
SAKGLCERGFDLTVWFIAAWEISLEKKRVDQALFCERVGKPVETRYWDHY
PSNIGALLSSRHRLAMAEVFDEYDFFISIEDDMYVTPYHFDSYLHASSQL
ALTTDPFALEHYLAGFSRKEHDKNNQVHEGEWAIWETDAKDYTAIELKGA
GWWGKVSGNPHQGMWMATREQVMNLDMRCKDGFIHLRNPDKADWVEVRRG
GRGGGREGIDELDALCHTPVPLTSFPLFPQHMPYYYRPCPSSFGAAPSSY
TTALPTARASVKSYLLMTPMGVLNPSLCGI*
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protein sequence of NO03G00400.2

>NO03G00400.2-protein ID=NO03G00400.2-protein|Name=NO03G00400.2|organism=Nannochloropsis oceanica|type=polypeptide|length=457bp
MLGKGSIAKPVQGNVPSKRHLALGQYMTDATERDSDGSRVYTPAGRGPSQ
RRKRLGWFVVGALVLVSITLNVVAFRGDVRDRDLVNQENKPMGEAKRASS
WLLWPEELTLRYYFQRLGSIVGGGYAMDEERKKGQKEKEVVGKNIDAISV
SGMREGEGKEGEGRAEGAAAAASAAETEGGVPPLSPPRPQSDISHHRDTD
AALIPINEKVPHRQEEAAGRPQEEKGEDEEEVLVEGKENKGERNEDGNEE
QEAGAKTGEGMGPVTQLRYVIEEKRNPAIPRVQPAGDKSVRIHFSSRSSS
SSSSRPPLHRPASETHIQKILLTISSTDRGQRIADMWQGDKLDTILQTLG
SAKGLCERGFDLTVWFIAAWEISLEKKRVDQALFCERVGKPVETRYWDHY
PSNIGALLSSRHRLAMAEVFGREEGKERREEEDKRGKTGWQVDSLRNVRM
RSLNNC*
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protein sequence of NO03G00400.1

>NO03G00400.1-protein ID=NO03G00400.1-protein|Name=NO03G00400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=625bp
MLGKGSIAKPVQGNVPSKRHLALGQYMTDATERDSDGSRVYTPAGRGPSQ
RRKRLGWFVVGALVLVSITLNVVAFRGDVRDRDLVNQENKPMGEAKRASS
WLLWPEELTLRYYFQRLGSIVGGGYAMDEERKKGQKEKEVVGKNIDAISV
SGMREGEGKEGEGRAEGAAAAASAAETEGGVPPLSPPRPQSDISHHRDTD
AALIPINEKVPHRQEEAAGRPQEEKGEDEEEVLVEGKENKGERNEDGNEE
QEAGAKTGEGMGPVTQLRYVIEEKRNPAIPRVQPAGDKSVRIHFSSRSSS
SSSSRPPLHRPASETHIQKILLTISSTDRGQRIADMWQGDKLDTILQTLG
SAKGLCERGFDLTVWFIAAWEISLEKKRVDQALFCERVGKPVETRYWDHY
PSNIGALLSSRHRLAMAEVFDEYDFFISIEDDMYVTPYHFDSYLHASSQL
ALTTDPFALEHYLAGFSRKEHDKNNQVHEGEWAIWETDAKDYTAIELKGA
GWWGKVSGNPHQGMWMATREQVMNLDMRCKDGFIHLRNPDKADWVEFWSG
ALQLYDSPAYCEGLRKVLPLDDANGGFESLTVWHMTDSKLHSRGKGVTPV
REVIAYLEDDKARKIAGRKERVDG*
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Synonyms
Publications