NO02G06120, NO02G06120 (gene) Nannochloropsis oceanica

Overview
NameNO02G06120
Unique NameNO02G06120
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3001
Alignment locationchr2:1635798..1638798 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1635798..1638798 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Homology
The following BLAST results are available for this feature:
BLAST of NO02G06120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL019nonsL019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR004ngnoR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G06120.1NO02G06120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO02G06120.2NO02G06120.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G06120.1NO02G06120.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO02G06120.2NO02G06120.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G06120 ID=NO02G06120|Name=NO02G06120|organism=Nannochloropsis oceanica|type=gene|length=3001bp
ATGCTGCATCTTGCGACCACCCGTCCCCTCCGTAGCCCCGGAAAGGTCCA
GCAGCAGCAGCGCCTTCTTGCACGCTTTTCCTCCTCGACGgtaaccgcca
atgtgtttgatgtatttgatgtatatgccttgctttggatgggtaagagg
gattggtgccgaattgttactagtcccccttgccggatcatctccgactt
gcccacggcacattcacacacgtacacgtctttcttcttctagGCGGCGC
AGGACAGGAGCAGCAGAGGAGGCAACGGTTCCTCCTCTTCCTCTTCCTCG
TGGTGGCACCAGCATCTGGGACTCCTGACCATCGCAGGGCTGGCCATTGC
TGACCTGGTCGTGCTACCAACTACCATCGAGgtgagggagtgggaaggaa
aagggaggacgggatgacaagaggacagaacgaccaaattgccgggttca
gcaaggacgtattaggggcgatatatgcgggtaataatggaagcgaaggt
gtactaactaacatgcagatcgtcacataccttcctctctcaaattcaag
ctcagtgaccctccctctcccccccctttcattctctccctgcttctcct
tcaccagTTCATTAACGACTTCAAGGGCGCCCAAGCGATCGCACAGGGCA
ACCTCCACACCTTGCTTCCATCCCGCGAGGCTTCCGGTgtaagtcttagt
cgggggggagggagggaaggaggcaggcaggcgagaagcagaagagggcg
ggcttaggaagagcccgaacggcatcacaggccgctgaagaggacgaggt
gggtaggtaggtacaagaggaggcaaaaacctaataaaaacggaactggt
gaaatagagagttttagcagtacagggtgtctaccgtgactgcattcctt
ttcccccctccccatccgccccttgcccttcccctccctctcccccctcc
ttccttccttcctctcacacagGTGGTTTTCGCCGCTCCCCCCCTCCTCC
GCCCGTCCCTCCAGCGCCAGATCCTTTCCTGCCTGGGCCCTCACTTGACC
AGCAGCAGCAGCAGCTCGGTCGGGCGGTACTACGTCATGTGTGGGGAGGA
GGGGACGGGGAAGAGCAGTTTGGCCAAGGCAGCGGCACGAGAGGTGGGGA
AAGGAATAATTTACGTGGATGTCAGTAGCTCTCAGGGAGACCTTCCCGCC
GCCATTCGTCGGGCCTTGGGGGGACAGCACCGCCCATACCACTCCCGCCT
CCTCGCCCTCCGTGATCGCCTCCTCGCCCTCCCGCCCTCTCCCCCTGTGC
CCACCCCTCTGGAGGAAGCCGTAACTGCCTTGAACCGCGCCGCACGCCGC
ACCTCCTTCTCTCCTTCTTCCTCCCCTTCCTCTTCCCCCTCCTTGGCCAG
CACGCCCGTCACGgtcattttcgacggcctccacagcctcaagccctccc
cctcctccctcctcgagctccaatccctcctcagcggaccgcactccccc
cctccttcctttccctcctcgttctccctcccggccccctcctcgggcag
TTGCGGCAGCACCCTGCCTGGTCCTCGAGTGGGGGGATGGTAAGAGTCAA
CGACCTGGACAAACGCGAGGCCATCGCCTTGCTAAGCGGGGAGGGAGGGC
GGGAGGGAGGGCGGGAGGGAGGGCGGGAGGGAGGGCGGGTCTCCAAGGCG
GTGGCTGCGGAGGTGTATGCGTTAGTGGGGGGAAGGGTGGCACACGTGGT
TAGGGCTGCGGAGATGATGAAGGTGGAGGGCAGGGGATTGGAAGgtacga
ggggaggtgggggggaggaggggagggagggaaggaaaggggctggttgc
attgttggaggaatagagaaatgactcctccatccctccctccccatatc
cctccttcctttattctccgacagAGATCGCCCTCGACGCTTATCAGAGC
ATGCGTGCCGGCTTTGACCGCCTTGTCTCCCTCAACCCGCCTCCCTTCCC
TCCCTCCTCCTCGCCCTTCTCCACCTTTTCCTCCTTCTCCACCTCCTCCT
CAGTCGCGCCTTCCCCCTCCTCTCCTCCCGGCCAGCGGCTTCTGGAGGCC
CTCCTTCTATCTCCGAGCAGACAGCTGTCTGTGCAGGCAGCCTCCGCCTT
GCTGAACCTGGACGTGACCCGTTTGGTGGAGAGCCACAGgtggggagcct
gctgtgtgctcgccctttttctcctttcccgatccctctctcctttccct
cttgtctcctattgtcgtatgctatcgcacgtcaactgtcacccgtctcc
tttccccccttccccacttcccccccgctttcagTCCCATCCTGGCCCTG
GACTACAGCTTGCCCAATTCCTCCTACGTACGTTTTCGCTCTCCTCTCGC
CGAGCGCTGTGCACACATCTATCTGATGGTGAGGGAGGGAGGGAGGGAGG
AGGAGGTGCTTCAATGGTTCGTGTCAGTCTTGCAAAGGGCTGCGGGGATA
GGAAGGGACGGAAAGAGCGGGGACGGAATGGGCTGCAGCAGCAGCGGAGG
GAGGATAAAGGAGCTGGCCAGGAGGATGAAGTCTGAGGGAAGGGGGCAAG
GGGGGGAGGAAGGAGAGGGAGGGAAAACGGGGGTCAAGAGAAATGCAACC
TTGGTCTTAGTGGCCTCGGCCCTCGCCCTCTTGTACGTGGCAGTAGGAGG
TGGTGGAGGAGGAAGGGAGTTTGGGGGGAACTTTGCTTTTCCATTACCAC
CGAGGGCGGACGTAGCACGCGCGAATTTGAAGAAGGCGAGTGAGGGGGCT
TGGAGGGCTTTGAAAGAGGGAATGGGGATAGCCAGGGAGTCCGTCGGAAT
GGCAGTAGAGTATGCGGAGCAATGGCGGGCGCGTAGAGGAGGAAGGGGAG
GAGGAGGGAGGGGATGAGGACGGATGTAATCTAGTGTGTTATACAAGAGG
TCCCAAAACGACAAATGAAGAAAGAAAAATTCTCGTGTGGGAACGTCTCC
A
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protein sequence of NO02G06120.1

>NO02G06120.1-protein ID=NO02G06120.1-protein|Name=NO02G06120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=614bp
MLHLATTRPLRSPGKVQQQQRLLARFSSSTAAQDRSSRGGNGSSSSSSSW
WHQHLGLLTIAGLAIADLVVLPTTIEFINDFKGAQAIAQGNLHTLLPSRE
ASGVVFAAPPLLRPSLQRQILSCLGPHLTSSSSSSVGRYYVMCGEEGTGK
SSLAKAAAREVGKGIIYVDVSSSQGDLPAAIRRALGGQHRPYHSRLLALR
DRLLALPPSPPVPTPLEEAVTALNRAARRTSFSPSSSPSSSPSLASTPVT
LRQHPAWSSSGGMVRVNDLDKREAIALLSGEGGREGGREGGREGGRVSKA
VAAEVYALVGGRVAHVVRAAEMMKVEGRGLEEIALDAYQSMRAGFDRLVS
LNPPPFPPSSSPFSTFSSFSTSSSVAPSPSSPPGQRLLEALLLSPSRQLS
VQAASALLNLDVTRLVESHSPILALDYSLPNSSYVRFRSPLAERCAHIYL
MVREGGREEEVLQWFVSVLQRAAGIGRDGKSGDGMGCSSSGGRIKELARR
MKSEGRGQGGEEGEGGKTGVKRNATLVLVASALALLYVAVGGGGGGREFG
GNFAFPLPPRADVARANLKKASEGAWRALKEGMGIARESVGMAVEYAEQW
RARRGGRGGGGRG*
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protein sequence of NO02G06120.2

>NO02G06120.2-protein ID=NO02G06120.2-protein|Name=NO02G06120.2|organism=Nannochloropsis oceanica|type=polypeptide|length=552bp
MLHLATTRPLRSPGKVQQQQRLLARFSSSTAAQDRSSRGGNGSSSSSSSW
WHQHLGLLTIAGLAIADLVVLPTTIEFINDFKGAQAIAQGNLHTLLPSRE
ASGVVFAAPPLLRPSLQRQILSCLGPHLTSSSSSSVGRYYVMCGEEGTGK
SSLAKAAAREVGKGIIYVDVSSSQGDLPAAIRRALGGQHRPYHSRLLALR
DRLLALPPSPPVPTPLEEAVTALNRAARRTSFSPSSSPSSSPSLASTPVT
LRQHPAWSSSGGMVRVNDLDKREAIALLSGEGGREGGREGGREGGRVSKA
VAAEVYALVGGRVAHVVRAAEMMKVEGRGLEEIALDAYQSMRAGFDRLVS
LNPPPFPPSSSPFSTFSSFSTSSSVAPSPSSPPGQRLLEALLLSPSRQLS
VQAASALLNLDVTRLVESHRWGACCVLALFLLSRSLSPFPLVSYCRMLSH
VNCHPSPFPPSPLPPRFQSHPGPGLQLAQFLLRTFSLSSRRALCTHLSDG
EGGREGGGGASMVRVSLAKGCGDRKGRKERGRNGLQQQRREDKGAGQEDE
V*
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Synonyms
Publications